PDB Short entry for 4BKU HEADER OXIDOREDUCTASE 29-APR-13 4BKU TITLE ENOYL-ACP REDUCTASE FABI FROM BURKHOLDERIA PSEUDOMALLEI WITH COFACTOR TITLE 2 NADH AND INHIBITOR PT155 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE [NADH]; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ENOYL-ACP REDUCTASE FABI; COMPND 5 EC: 1.3.1.9; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BURKHOLDERIA PSEUDOMALLEI; SOURCE 3 ORGANISM_TAXID: 884204; SOURCE 4 STRAIN: BP82; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PET23B KEYWDS OXIDOREDUCTASE, FATTY ACID BIOSYNTHESIS, ENOYL- ACP REDUCTASE, KEYWDS 2 PYRIDONE EXPDTA X-RAY DIFFRACTION AUTHOR M.W.HIRSCHBECK,N.LIU,C.NECKLES,P.J.TONGE,C.KISKER REVDAT 6 20-DEC-23 4BKU 1 REMARK REVDAT 5 28-JUN-17 4BKU 1 REMARK REVDAT 4 10-DEC-14 4BKU 1 REMARK REVDAT 3 13-AUG-14 4BKU 1 JRNL HETATM REVDAT 2 30-APR-14 4BKU 1 JRNL REVDAT 1 09-APR-14 4BKU 0 JRNL AUTH J.SCHIEBEL,A.CHANG,S.SHAH,Y.LU,L.LIU,P.PAN,M.W.HIRSCHBECK, JRNL AUTH 2 M.TAREILUS,S.ELTSCHKNER,W.YU,J.E.CUMMINGS,S.E.KNUDSON, JRNL AUTH 3 G.R.BOMMINENI,S.G.WALKER,R.A.SLAYDEN,C.A.SOTRIFFER, JRNL AUTH 4 P.J.TONGE,C.KISKER JRNL TITL RATIONAL DESIGN OF BROAD SPECTRUM ANTIBACTERIAL ACTIVITY JRNL TITL 2 BASED ON A CLINICALLY RELEVANT ENOYL-ACYL CARRIER PROTEIN JRNL TITL 3 (ACP) REDUCTASE INHIBITOR. JRNL REF J.BIOL.CHEM. V. 289 15987 2014 JRNL REFN ISSN 0021-9258 JRNL PMID 24739388 JRNL DOI 10.1074/JBC.M113.532804 REMARK 2 REMARK 2 RESOLUTION. 1.84 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.84 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.58 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 22268 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.138 REMARK 3 R VALUE (WORKING SET) : 0.137 REMARK 3 FREE R VALUE : 0.162 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1140 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 28.5814 - 3.6797 0.99 2764 129 0.1404 0.1417 REMARK 3 2 3.6797 - 2.9216 1.00 2659 159 0.1321 0.1515 REMARK 3 3 2.9216 - 2.5526 1.00 2636 139 0.1357 0.1628 REMARK 3 4 2.5526 - 2.3193 1.00 2633 136 0.1300 0.1681 REMARK 3 5 2.3193 - 2.1531 1.00 2629 135 0.1223 0.1479 REMARK 3 6 2.1531 - 2.0262 1.00 2623 142 0.1303 0.1610 REMARK 3 7 2.0262 - 1.9248 1.00 2585 153 0.1385 0.2031 REMARK 3 8 1.9248 - 1.8410 1.00 2599 147 0.1913 0.2243 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.86 REMARK 3 K_SOL : 0.44 REMARK 3 B_SOL : 45.83 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 13.510 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.33230 REMARK 3 B22 (A**2) : 0.16150 REMARK 3 B33 (A**2) : 2.17080 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 2073 REMARK 3 ANGLE : 1.137 2828 REMARK 3 CHIRALITY : 0.077 325 REMARK 3 PLANARITY : 0.005 359 REMARK 3 DIHEDRAL : 14.386 762 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 2:41) REMARK 3 ORIGIN FOR THE GROUP (A): -10.1995 -3.8069 15.0096 REMARK 3 T TENSOR REMARK 3 T11: 0.0632 T22: 0.1190 REMARK 3 T33: 0.0759 T12: 0.0394 REMARK 3 T13: -0.0128 T23: -0.0209 REMARK 3 L TENSOR REMARK 3 L11: 0.9870 L22: 1.6262 REMARK 3 L33: 1.7548 L12: 0.4241 REMARK 3 L13: -0.1884 L23: -0.6295 REMARK 3 S TENSOR REMARK 3 S11: -0.0119 S12: 0.0394 S13: -0.0517 REMARK 3 S21: -0.0601 S22: 0.0313 S23: -0.0633 REMARK 3 S31: 0.0985 S32: 0.1490 S33: -0.0258 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 42:55) REMARK 3 ORIGIN FOR THE GROUP (A): -9.1650 -10.8951 25.8298 REMARK 3 T TENSOR REMARK 3 T11: 0.1284 T22: 0.1131 REMARK 3 T33: 0.1395 T12: 0.0242 REMARK 3 T13: -0.0648 T23: 0.0357 REMARK 3 L TENSOR REMARK 3 L11: 5.7840 L22: 4.6189 REMARK 3 L33: 7.8508 L12: 2.7933 REMARK 3 L13: -4.2478 L23: -3.5671 REMARK 3 S TENSOR REMARK 3 S11: 0.1110 S12: -0.3317 S13: -0.1989 REMARK 3 S21: 0.2602 S22: 0.1276 S23: 0.0295 REMARK 3 S31: 0.3212 S32: -0.0175 S33: -0.2118 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 56:178) REMARK 3 ORIGIN FOR THE GROUP (A): -25.5830 -0.3679 19.7677 REMARK 3 T TENSOR REMARK 3 T11: 0.0660 T22: 0.0604 REMARK 3 T33: 0.0664 T12: 0.0148 REMARK 3 T13: -0.0004 T23: -0.0073 REMARK 3 L TENSOR REMARK 3 L11: 0.8983 L22: 0.3103 REMARK 3 L33: 0.4459 L12: 0.2128 REMARK 3 L13: 0.1368 L23: -0.0100 REMARK 3 S TENSOR REMARK 3 S11: -0.0062 S12: -0.0350 S13: -0.0382 REMARK 3 S21: 0.0325 S22: 0.0031 S23: -0.0242 REMARK 3 S31: -0.0007 S32: 0.0270 S33: 0.0018 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 179:203) REMARK 3 ORIGIN FOR THE GROUP (A): -23.8563 -8.3527 12.3702 REMARK 3 T TENSOR REMARK 3 T11: 0.0652 T22: 0.0802 REMARK 3 T33: 0.0741 T12: 0.0108 REMARK 3 T13: 0.0082 T23: -0.0064 REMARK 3 L TENSOR REMARK 3 L11: 0.5543 L22: 3.0841 REMARK 3 L33: 1.0161 L12: 0.5481 REMARK 3 L13: -0.1640 L23: -1.0642 REMARK 3 S TENSOR REMARK 3 S11: -0.0106 S12: -0.0432 S13: -0.0464 REMARK 3 S21: -0.0145 S22: 0.0476 S23: 0.1222 REMARK 3 S31: 0.1249 S32: 0.0329 S33: -0.0387 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 204:256) REMARK 3 ORIGIN FOR THE GROUP (A): -22.8453 -9.2067 2.2762 REMARK 3 T TENSOR REMARK 3 T11: 0.0609 T22: 0.0552 REMARK 3 T33: 0.0302 T12: 0.0156 REMARK 3 T13: 0.0151 T23: 0.0031 REMARK 3 L TENSOR REMARK 3 L11: 1.1723 L22: 1.5771 REMARK 3 L33: 1.0745 L12: 0.2372 REMARK 3 L13: 0.2859 L23: 0.5121 REMARK 3 S TENSOR REMARK 3 S11: -0.0033 S12: 0.0165 S13: -0.1321 REMARK 3 S21: 0.0254 S22: 0.0197 S23: -0.0205 REMARK 3 S31: 0.1078 S32: 0.0523 S33: -0.0131 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4BKU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 29-APR-13. REMARK 100 THE DEPOSITION ID IS D_1290056686. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS HTC REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22291 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.840 REMARK 200 RESOLUTION RANGE LOW (A) : 37.970 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 5.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 4.900 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 14.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.84 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.94 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.50 REMARK 200 R MERGE FOR SHELL (I) : 0.26000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 5.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3EK2 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.83 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.15 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 3350 200 MM (NH4)2HPO4 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 37.16000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 37.97500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 44.71000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 37.16000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 37.97500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 44.71000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 37.16000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 37.97500 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 44.71000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 37.16000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 37.97500 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 44.71000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 18940 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 31400 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -119.4 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -74.32000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 4 -1.000000 0.000000 0.000000 -74.32000 REMARK 350 BIOMT2 4 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A2006 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2258 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2327 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2335 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 259 REMARK 465 GLY A 260 REMARK 465 LEU A 261 REMARK 465 GLU A 262 REMARK 465 GLU A 263 REMARK 465 LYS A 264 REMARK 465 LEU A 265 REMARK 465 ALA A 266 REMARK 465 ALA A 267 REMARK 465 ALA A 268 REMARK 465 LEU A 269 REMARK 465 GLU A 270 REMARK 465 HIS A 271 REMARK 465 HIS A 272 REMARK 465 HIS A 273 REMARK 465 HIS A 274 REMARK 465 HIS A 275 REMARK 465 HIS A 276 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 2312 O HOH A 2313 1.91 REMARK 500 NH2 ARG A 43 O HOH A 2112 1.91 REMARK 500 O HOH A 2104 O HOH A 2164 1.94 REMARK 500 NH2 ARG A 43 O HOH A 2112 1.97 REMARK 500 O HOH A 2055 O HOH A 2056 2.09 REMARK 500 O HOH A 2057 O HOH A 2117 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 63 106.47 -163.68 REMARK 500 ASN A 155 -22.03 76.15 REMARK 500 ASN A 157 -120.11 45.22 REMARK 500 ASP A 248 24.28 -152.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2063 DISTANCE = 5.95 ANGSTROMS REMARK 525 HOH A2197 DISTANCE = 6.02 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAI A 1259 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1S5 A 1260 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4BKO RELATED DB: PDB REMARK 900 ENOYL-ACP REDUCATASE FABV FROM BURKHOLDERIA PSEUDOMALLEI (APO) REMARK 900 RELATED ID: 4BKQ RELATED DB: PDB REMARK 900 ENOYL-ACP REDUCTASE FROM YERSINIA PESTIS (WILDTYPE)WITH COFACTOR REMARK 900 NADH REMARK 900 RELATED ID: 4BKR RELATED DB: PDB REMARK 900 ENOYL-ACP REDUCTASE FROM YERSINIA PESTIS (WILDTYPE, REMOVED HISTAG) REMARK 900 WITH COFACTOR NADH REMARK 999 REMARK 999 SEQUENCE REMARK 999 NCBI REFERENCE SEQUENCE YP_108799.1 DBREF 4BKU A 1 263 UNP I1WHT9 I1WHT9_BURPE 1 263 SEQADV 4BKU LYS A 264 UNP I1WHT9 EXPRESSION TAG SEQADV 4BKU LEU A 265 UNP I1WHT9 EXPRESSION TAG SEQADV 4BKU ALA A 266 UNP I1WHT9 EXPRESSION TAG SEQADV 4BKU ALA A 267 UNP I1WHT9 EXPRESSION TAG SEQADV 4BKU ALA A 268 UNP I1WHT9 EXPRESSION TAG SEQADV 4BKU LEU A 269 UNP I1WHT9 EXPRESSION TAG SEQADV 4BKU GLU A 270 UNP I1WHT9 EXPRESSION TAG SEQADV 4BKU HIS A 271 UNP I1WHT9 EXPRESSION TAG SEQADV 4BKU HIS A 272 UNP I1WHT9 EXPRESSION TAG SEQADV 4BKU HIS A 273 UNP I1WHT9 EXPRESSION TAG SEQADV 4BKU HIS A 274 UNP I1WHT9 EXPRESSION TAG SEQADV 4BKU HIS A 275 UNP I1WHT9 EXPRESSION TAG SEQADV 4BKU HIS A 276 UNP I1WHT9 EXPRESSION TAG SEQRES 1 A 276 MET GLY PHE LEU ASP GLY LYS ARG ILE LEU LEU THR GLY SEQRES 2 A 276 LEU LEU SER ASN ARG SER ILE ALA TYR GLY ILE ALA LYS SEQRES 3 A 276 ALA CYS LYS ARG GLU GLY ALA GLU LEU ALA PHE THR TYR SEQRES 4 A 276 VAL GLY ASP ARG PHE LYS ASP ARG ILE THR GLU PHE ALA SEQRES 5 A 276 ALA GLU PHE GLY SER GLU LEU VAL PHE PRO CYS ASP VAL SEQRES 6 A 276 ALA ASP ASP ALA GLN ILE ASP ALA LEU PHE ALA SER LEU SEQRES 7 A 276 LYS THR HIS TRP ASP SER LEU ASP GLY LEU VAL HIS SER SEQRES 8 A 276 ILE GLY PHE ALA PRO ARG GLU ALA ILE ALA GLY ASP PHE SEQRES 9 A 276 LEU ASP GLY LEU THR ARG GLU ASN PHE ARG ILE ALA HIS SEQRES 10 A 276 ASP ILE SER ALA TYR SER PHE PRO ALA LEU ALA LYS ALA SEQRES 11 A 276 ALA LEU PRO MET LEU SER ASP ASP ALA SER LEU LEU THR SEQRES 12 A 276 LEU SER TYR LEU GLY ALA GLU ARG ALA ILE PRO ASN TYR SEQRES 13 A 276 ASN THR MET GLY LEU ALA LYS ALA ALA LEU GLU ALA SER SEQRES 14 A 276 VAL ARG TYR LEU ALA VAL SER LEU GLY ALA LYS GLY VAL SEQRES 15 A 276 ARG VAL ASN ALA ILE SER ALA GLY PRO ILE LYS THR LEU SEQRES 16 A 276 ALA ALA SER GLY ILE LYS SER PHE GLY LYS ILE LEU ASP SEQRES 17 A 276 PHE VAL GLU SER ASN SER PRO LEU LYS ARG ASN VAL THR SEQRES 18 A 276 ILE GLU GLN VAL GLY ASN ALA GLY ALA PHE LEU LEU SER SEQRES 19 A 276 ASP LEU ALA SER GLY VAL THR ALA GLU VAL MET HIS VAL SEQRES 20 A 276 ASP SER GLY PHE ASN ALA VAL VAL GLY GLY MET ALA GLY SEQRES 21 A 276 LEU GLU GLU LYS LEU ALA ALA ALA LEU GLU HIS HIS HIS SEQRES 22 A 276 HIS HIS HIS HET NAI A1259 44 HET 1S5 A1260 23 HETNAM NAI 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE HETNAM 1S5 5-(4-AMINO-2-METHYLPHENOXY)-2-HEXYL-4-HYDROXY-1- HETNAM 2 1S5 METHYLPYRIDINIUM HETSYN NAI NADH FORMUL 2 NAI C21 H29 N7 O14 P2 FORMUL 3 1S5 C19 H26 N2 O2 FORMUL 4 HOH *343(H2 O) HELIX 1 1 SER A 19 GLU A 31 1 13 HELIX 2 2 GLY A 41 ARG A 43 5 3 HELIX 3 3 PHE A 44 PHE A 55 1 12 HELIX 4 4 ASP A 67 THR A 80 1 14 HELIX 5 5 PRO A 96 ALA A 101 5 6 HELIX 6 6 THR A 109 ALA A 121 1 13 HELIX 7 7 TYR A 122 LEU A 132 1 11 HELIX 8 8 TYR A 146 GLU A 150 5 5 HELIX 9 9 TYR A 156 ALA A 179 1 24 HELIX 10 10 PHE A 203 SER A 214 1 12 HELIX 11 11 THR A 221 SER A 234 1 14 HELIX 12 12 ASP A 235 SER A 238 5 4 HELIX 13 13 GLY A 250 VAL A 254 5 5 SHEET 1 AA 7 VAL A 60 PRO A 62 0 SHEET 2 AA 7 GLU A 34 TYR A 39 1 O PHE A 37 N PHE A 61 SHEET 3 AA 7 ARG A 8 LEU A 11 1 O ILE A 9 N ALA A 36 SHEET 4 AA 7 LEU A 85 HIS A 90 1 N ASP A 86 O ARG A 8 SHEET 5 AA 7 LEU A 135 SER A 145 1 N SER A 136 O LEU A 85 SHEET 6 AA 7 ARG A 183 ALA A 189 1 O ARG A 183 N LEU A 141 SHEET 7 AA 7 VAL A 244 VAL A 247 1 O MET A 245 N SER A 188 SITE 1 AC1 30 GLY A 13 LEU A 15 SER A 19 ILE A 20 SITE 2 AC1 30 VAL A 40 CYS A 63 ASP A 64 VAL A 65 SITE 3 AC1 30 SER A 91 ILE A 92 GLY A 93 LEU A 144 SITE 4 AC1 30 SER A 145 LYS A 163 ALA A 189 GLY A 190 SITE 5 AC1 30 PRO A 191 ILE A 192 1S5 A1260 HOH A2038 SITE 6 AC1 30 HOH A2039 HOH A2044 HOH A2053 HOH A2101 SITE 7 AC1 30 HOH A2198 HOH A2338 HOH A2339 HOH A2340 SITE 8 AC1 30 HOH A2341 HOH A2342 SITE 1 AC2 9 GLY A 93 ALA A 95 ILE A 100 PRO A 154 SITE 2 AC2 9 ASN A 155 TYR A 156 PHE A 203 ILE A 206 SITE 3 AC2 9 NAI A1259 CRYST1 74.320 75.950 89.420 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013455 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013167 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011183 0.00000