PDB Short entry for 4C35 HEADER TRANSFERASE/INHIBITOR 21-AUG-13 4C35 TITLE PKA-S6K1 CHIMERA WITH COMPOUND 1 (NU1085) BOUND COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAMP-DEPENDENT PROTEIN KINASE CATALYTIC SUBUNIT ALPHA; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PKA C-ALPHA; COMPND 5 EC: 2.7.11.11; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 OTHER_DETAILS: PKA-S6K1 CHIMERA; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: CAMP-DEPENDENT PROTEIN KINASE INHIBITOR ALPHA; COMPND 11 CHAIN: I; COMPND 12 FRAGMENT: RESIDUES 6-23; COMPND 13 SYNONYM: PKI-ALPHA; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 3 ORGANISM_COMMON: BOVINE; SOURCE 4 ORGANISM_TAXID: 9913; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 11 ORGANISM_COMMON: BOVINE; SOURCE 12 ORGANISM_TAXID: 9913 KEYWDS TRANSFERASE-INHIBITOR COMPLEX, CHIMERA, S6K1 EXPDTA X-RAY DIFFRACTION AUTHOR S.COUTY,I.M.WESTWOOD,A.KALUSA,C.CANO,J.TRAVERS,K.BOXALL,C.L.CHOW, AUTHOR 2 S.BURNS,J.SCHMITT,L.PICKARD,C.BARILLARI,P.C.MCANDREW,P.A.CLARKE, AUTHOR 3 S.LINARDOPOULOS,R.J.GRIFFIN,G.W.AHERNE,F.I.RAYNAUD,P.WORKMAN, AUTHOR 4 K.JONES,R.L.M.VAN MONTFORT REVDAT 4 20-DEC-23 4C35 1 REMARK REVDAT 3 09-OCT-19 4C35 1 JRNL LINK REVDAT 2 20-NOV-13 4C35 1 JRNL REVDAT 1 09-OCT-13 4C35 0 JRNL AUTH S.COUTY,I.M.WESTWOOD,A.KALUSA,C.CANO,J.TRAVERS,K.BOXALL, JRNL AUTH 2 C.L.CHOW,S.BURNS,J.SCHMITT,L.PICKARD,C.BARILLARI, JRNL AUTH 3 P.C.MCANDREW,P.A.CLARKE,S.LINARDOPOULOS,R.J.GRIFFIN, JRNL AUTH 4 G.W.AHERNE,F.I.RAYNAUD,P.WORKMAN,K.JONES,R.L.VAN MONTFORT JRNL TITL THE DISCOVERY OF POTENT RIBOSOMAL S6 KINASE INHIBITORS BY JRNL TITL 2 HIGH-THROUGHPUT SCREENING AND STRUCTURE-GUIDED DRUG DESIGN. JRNL REF ONCOTARGET V. 4 1647 2013 JRNL REFN ESSN 1949-2553 JRNL PMID 24072592 JRNL DOI 10.18632/ONCOTARGET.1255 REMARK 2 REMARK 2 RESOLUTION. 2.19 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.11.2 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.19 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 53.23 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 21129 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.186 REMARK 3 R VALUE (WORKING SET) : 0.183 REMARK 3 FREE R VALUE : 0.240 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.070 REMARK 3 FREE R VALUE TEST SET COUNT : 1072 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 11 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.19 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.30 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.42 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2779 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2029 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2633 REMARK 3 BIN R VALUE (WORKING SET) : 0.1993 REMARK 3 BIN FREE R VALUE : 0.2656 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.25 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 146 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2890 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 27 REMARK 3 SOLVENT ATOMS : 178 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 40.67 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 43.67 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -4.06720 REMARK 3 B22 (A**2) : 0.67440 REMARK 3 B33 (A**2) : 3.39280 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.285 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.253 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.204 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.239 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.202 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.949 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.922 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 3002 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 4076 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1008 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 72 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 456 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 3002 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 376 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 3619 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.02 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.82 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 17.99 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A REMARK 3 ORIGIN FOR THE GROUP (A): 9.8860 90.8214 93.4719 REMARK 3 T TENSOR REMARK 3 T11: -0.2077 T22: -0.1674 REMARK 3 T33: -0.1257 T12: 0.0374 REMARK 3 T13: 0.0075 T23: -0.0154 REMARK 3 L TENSOR REMARK 3 L11: 1.3689 L22: 2.4423 REMARK 3 L33: 1.9996 L12: 0.2278 REMARK 3 L13: -0.4777 L23: 0.0952 REMARK 3 S TENSOR REMARK 3 S11: -0.0179 S12: 0.0136 S13: 0.0014 REMARK 3 S21: 0.0853 S22: -0.0342 S23: 0.1259 REMARK 3 S31: -0.0206 S32: 0.0603 S33: 0.0521 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN I REMARK 3 ORIGIN FOR THE GROUP (A): -5.0064 80.0822 100.5020 REMARK 3 T TENSOR REMARK 3 T11: -0.1192 T22: -0.1514 REMARK 3 T33: 0.1750 T12: -0.0363 REMARK 3 T13: 0.0691 T23: -0.0497 REMARK 3 L TENSOR REMARK 3 L11: 2.6155 L22: 0.0079 REMARK 3 L33: 1.9590 L12: 0.4666 REMARK 3 L13: 1.8957 L23: 0.9290 REMARK 3 S TENSOR REMARK 3 S11: 0.0590 S12: -0.0679 S13: -0.3043 REMARK 3 S21: -0.0042 S22: -0.0505 S23: 0.2338 REMARK 3 S31: 0.0954 S32: -0.4209 S33: -0.0085 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: IDEAL-DIST CONTACT TERM CONTACT SETUP REMARK 3 ALL ATOMS HAVE CCP4 ATOM TYPE FROM LIBRARY REMARK 4 REMARK 4 4C35 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 21-AUG-13. REMARK 100 THE DEPOSITION ID IS D_1290058138. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-FEB-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I02 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21188 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.190 REMARK 200 RESOLUTION RANGE LOW (A) : 53.230 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.500 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 3.900 REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 15.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.19 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.26 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 3.90 REMARK 200 R MERGE FOR SHELL (I) : 0.35000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 4C33 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 18 MG/ML PROTEIN IN 25MM MES-BIS-TRIS REMARK 280 PH 6.5, 75MM LICL, 0.1MM EDTA, 1MM MEGA-8, 1MM DTT AND 1MM PKI REMARK 280 PEPTIDE MIXED 1:1 WITH 8-16% AQUEOUS METHANOL, PH 6.4 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 35.22000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 38.67000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 36.69000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 38.67000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 35.22000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 36.69000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2020 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16100 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -18.2 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, I REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0 REMARK 465 GLY A 1 REMARK 465 ASN A 2 REMARK 465 ALA A 3 REMARK 465 ALA A 4 REMARK 465 ALA A 5 REMARK 465 ALA A 6 REMARK 465 LYS A 7 REMARK 465 LYS A 8 REMARK 465 GLY A 9 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 12 CG CD OE1 NE2 REMARK 470 GLU A 13 CD OE1 OE2 REMARK 470 LYS A 16 CG CD CE NZ REMARK 470 GLU A 17 CG CD OE1 OE2 REMARK 470 LYS A 28 CE NZ REMARK 470 LYS A 61 CE NZ REMARK 470 GLU A 64 CG CD OE1 OE2 REMARK 470 LYS A 81 CG CD CE NZ REMARK 470 LYS A 83 CG CD CE NZ REMARK 470 LYS A 189 CE NZ REMARK 470 LYS A 192 CE NZ REMARK 470 LYS A 213 CG CD CE NZ REMARK 470 ASP A 241 CB CG OD1 OD2 REMARK 470 ILE A 244 CG1 CG2 CD1 REMARK 470 LYS A 254 CG CD CE NZ REMARK 470 ARG A 256 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 317 CG CD CE NZ REMARK 470 LYS A 319 CG CD CE NZ REMARK 470 GLU A 334 CG CD OE1 OE2 REMARK 470 ILE A 339 CG1 CG2 CD1 REMARK 470 LYS A 342 CG CD CE NZ REMARK 470 LYS A 345 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 112 -159.14 -126.09 REMARK 500 ASP A 166 39.00 -141.20 REMARK 500 THR A 183 -88.31 -103.23 REMARK 500 ASP A 184 108.88 -54.39 REMARK 500 LEU A 273 48.54 -81.74 REMARK 500 LYS A 319 57.46 -146.98 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NU3 A 1351 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MPD A 1352 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4C33 RELATED DB: PDB REMARK 900 PKA-S6K1 CHIMERA APO REMARK 900 RELATED ID: 4C34 RELATED DB: PDB REMARK 900 PKA-S6K1 CHIMERA WITH STAUROSPORINE BOUND REMARK 900 RELATED ID: 4C36 RELATED DB: PDB REMARK 900 PKA-S6K1 CHIMERA WITH COMPOUND 15E (CCT147581) BOUND REMARK 900 RELATED ID: 4C37 RELATED DB: PDB REMARK 900 PKA-S6K1 CHIMERA WITH COMPOUND 21A (CCT196539) BOUND REMARK 900 RELATED ID: 4C38 RELATED DB: PDB REMARK 900 PKA-S6K1 CHIMERA WITH COMPOUND 21E (CCT239066) BOUND REMARK 999 REMARK 999 SEQUENCE REMARK 999 PKA-S6K1 CHIMERA MUTATIONS ARE F54Y, M120L, V123L, L173M REMARK 999 AND Q181K DBREF 4C35 A 0 350 UNP P00517 KAPCA_BOVIN 1 351 DBREF 4C35 I 5 22 UNP Q3SX13 IPKA_BOVIN 6 23 SEQADV 4C35 TYR A 54 UNP P00517 PHE 55 ENGINEERED MUTATION SEQADV 4C35 LEU A 120 UNP P00517 MET 121 ENGINEERED MUTATION SEQADV 4C35 LEU A 123 UNP P00517 VAL 124 ENGINEERED MUTATION SEQADV 4C35 MET A 173 UNP P00517 LEU 174 ENGINEERED MUTATION SEQADV 4C35 LYS A 181 UNP P00517 GLN 182 ENGINEERED MUTATION SEQRES 1 A 351 MET GLY ASN ALA ALA ALA ALA LYS LYS GLY SEP GLU GLN SEQRES 2 A 351 GLU SER VAL LYS GLU PHE LEU ALA LYS ALA LYS GLU ASP SEQRES 3 A 351 PHE LEU LYS LYS TRP GLU ASN PRO ALA GLN ASN THR ALA SEQRES 4 A 351 HIS LEU ASP GLN PHE GLU ARG ILE LYS THR LEU GLY THR SEQRES 5 A 351 GLY SER TYR GLY ARG VAL MET LEU VAL LYS HIS MET GLU SEQRES 6 A 351 THR GLY ASN HIS TYR ALA MET LYS ILE LEU ASP LYS GLN SEQRES 7 A 351 LYS VAL VAL LYS LEU LYS GLN ILE GLU HIS THR LEU ASN SEQRES 8 A 351 GLU LYS ARG ILE LEU GLN ALA VAL ASN PHE PRO PHE LEU SEQRES 9 A 351 VAL LYS LEU GLU PHE SER PHE LYS ASP ASN SER ASN LEU SEQRES 10 A 351 TYR MET VAL LEU GLU TYR LEU PRO GLY GLY GLU MET PHE SEQRES 11 A 351 SER HIS LEU ARG ARG ILE GLY ARG PHE SEP GLU PRO HIS SEQRES 12 A 351 ALA ARG PHE TYR ALA ALA GLN ILE VAL LEU THR PHE GLU SEQRES 13 A 351 TYR LEU HIS SER LEU ASP LEU ILE TYR ARG ASP LEU LYS SEQRES 14 A 351 PRO GLU ASN LEU MET ILE ASP GLN GLN GLY TYR ILE LYS SEQRES 15 A 351 VAL THR ASP PHE GLY PHE ALA LYS ARG VAL LYS GLY ARG SEQRES 16 A 351 THR TRP TPO LEU CYS GLY THR PRO GLU TYR LEU ALA PRO SEQRES 17 A 351 GLU ILE ILE LEU SER LYS GLY TYR ASN LYS ALA VAL ASP SEQRES 18 A 351 TRP TRP ALA LEU GLY VAL LEU ILE TYR GLU MET ALA ALA SEQRES 19 A 351 GLY TYR PRO PRO PHE PHE ALA ASP GLN PRO ILE GLN ILE SEQRES 20 A 351 TYR GLU LYS ILE VAL SER GLY LYS VAL ARG PHE PRO SER SEQRES 21 A 351 HIS PHE SER SER ASP LEU LYS ASP LEU LEU ARG ASN LEU SEQRES 22 A 351 LEU GLN VAL ASP LEU THR LYS ARG PHE GLY ASN LEU LYS SEQRES 23 A 351 ASN GLY VAL ASN ASP ILE LYS ASN HIS LYS TRP PHE ALA SEQRES 24 A 351 THR THR ASP TRP ILE ALA ILE TYR GLN ARG LYS VAL GLU SEQRES 25 A 351 ALA PRO PHE ILE PRO LYS PHE LYS GLY PRO GLY ASP THR SEQRES 26 A 351 SER ASN PHE ASP ASP TYR GLU GLU GLU GLU ILE ARG VAL SEQRES 27 A 351 SEP ILE ASN GLU LYS CYS GLY LYS GLU PHE SER GLU PHE SEQRES 1 I 18 THR THR TYR ALA ASP PHE ILE ALA SER GLY ARG THR GLY SEQRES 2 I 18 ARG ARG ASN ALA ILE MODRES 4C35 SEP A 10 SER PHOSPHOSERINE MODRES 4C35 SEP A 139 SER PHOSPHOSERINE MODRES 4C35 TPO A 197 THR PHOSPHOTHREONINE MODRES 4C35 SEP A 338 SER PHOSPHOSERINE HET SEP A 10 10 HET SEP A 139 10 HET TPO A 197 11 HET SEP A 338 10 HET NU3 A1351 19 HET MPD A1352 8 HETNAM SEP PHOSPHOSERINE HETNAM TPO PHOSPHOTHREONINE HETNAM NU3 2-(4-HYDROXYPHENYL)-1H-BENZIMIDAZOLE-4-CARBOXAMIDE HETNAM MPD (4S)-2-METHYL-2,4-PENTANEDIOL HETSYN SEP PHOSPHONOSERINE HETSYN TPO PHOSPHONOTHREONINE FORMUL 1 SEP 3(C3 H8 N O6 P) FORMUL 1 TPO C4 H10 N O6 P FORMUL 3 NU3 C14 H11 N3 O2 FORMUL 4 MPD C6 H14 O2 FORMUL 5 HOH *178(H2 O) HELIX 1 1 SEP A 10 ASN A 32 1 23 HELIX 2 2 HIS A 39 ASP A 41 5 3 HELIX 3 3 LYS A 76 LEU A 82 1 7 HELIX 4 4 GLN A 84 VAL A 98 1 15 HELIX 5 5 GLU A 127 GLY A 136 1 10 HELIX 6 6 SEP A 139 LEU A 160 1 22 HELIX 7 7 LYS A 168 GLU A 170 5 3 HELIX 8 8 THR A 201 LEU A 205 5 5 HELIX 9 9 ALA A 206 LEU A 211 1 6 HELIX 10 10 LYS A 217 GLY A 234 1 18 HELIX 11 11 GLN A 242 GLY A 253 1 12 HELIX 12 12 SER A 262 LEU A 273 1 12 HELIX 13 13 VAL A 288 ASN A 293 1 6 HELIX 14 14 HIS A 294 ALA A 298 5 5 HELIX 15 15 ASP A 301 GLN A 307 1 7 HELIX 16 16 THR I 5 SER I 13 1 9 SHEET 1 AA 5 PHE A 43 THR A 51 0 SHEET 2 AA 5 ARG A 56 HIS A 62 -1 O VAL A 57 N LEU A 49 SHEET 3 AA 5 HIS A 68 ASP A 75 -1 O TYR A 69 N VAL A 60 SHEET 4 AA 5 ASN A 115 GLU A 121 -1 O LEU A 116 N LEU A 74 SHEET 5 AA 5 LEU A 106 LYS A 111 -1 N GLU A 107 O VAL A 119 SHEET 1 AB 2 LEU A 162 ILE A 163 0 SHEET 2 AB 2 LYS A 189 ARG A 190 -1 O LYS A 189 N ILE A 163 SHEET 1 AC 2 LEU A 172 ILE A 174 0 SHEET 2 AC 2 ILE A 180 VAL A 182 -1 O LYS A 181 N MET A 173 LINK C SEP A 10 N GLU A 11 1555 1555 1.35 LINK C PHE A 138 N SEP A 139 1555 1555 1.34 LINK C SEP A 139 N GLU A 140 1555 1555 1.34 LINK C TRP A 196 N TPO A 197 1555 1555 1.33 LINK C TPO A 197 N LEU A 198 1555 1555 1.34 LINK C VAL A 337 N SEP A 338 1555 1555 1.34 LINK C SEP A 338 N ILE A 339 1555 1555 1.35 SITE 1 AC1 14 VAL A 57 ALA A 70 GLU A 91 LEU A 95 SITE 2 AC1 14 LEU A 120 GLU A 121 TYR A 122 LEU A 123 SITE 3 AC1 14 MET A 173 THR A 183 ASP A 184 PHE A 185 SITE 4 AC1 14 PHE A 327 HOH A2165 SITE 1 AC2 5 VAL A 15 LEU A 19 PHE A 100 LEU A 152 SITE 2 AC2 5 GLU A 155 CRYST1 70.440 73.380 77.340 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014196 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013628 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012930 0.00000 HETATM 1 N SEP A 10 36.261 100.028 107.940 1.00 95.44 N ANISOU 1 N SEP A 10 9761 14377 12124 -1566 -2665 -585 N HETATM 2 CA SEP A 10 35.008 100.033 108.688 1.00 94.15 C ANISOU 2 CA SEP A 10 9966 14069 11737 -1520 -2632 -597 C HETATM 3 CB SEP A 10 34.684 101.471 109.164 1.00 96.71 C ANISOU 3 CB SEP A 10 10504 14289 11951 -1781 -2616 -749 C HETATM 4 OG SEP A 10 33.799 101.463 110.313 1.00 98.25 O ANISOU 4 OG SEP A 10 11021 14413 11895 -1762 -2675 -777 O HETATM 5 C SEP A 10 33.877 99.431 107.850 1.00 93.25 C ANISOU 5 C SEP A 10 9986 13790 11654 -1325 -2383 -520 C HETATM 6 O SEP A 10 33.646 99.874 106.719 1.00 90.99 O ANISOU 6 O SEP A 10 9669 13404 11502 -1358 -2174 -536 O HETATM 7 P SEP A 10 32.853 102.687 110.315 1.00 98.55 P ANISOU 7 P SEP A 10 11346 14238 11859 -1917 -2498 -899 P HETATM 8 O1P SEP A 10 31.983 102.652 109.097 1.00 95.76 O ANISOU 8 O1P SEP A 10 11036 13716 11633 -1806 -2216 -851 O HETATM 9 O2P SEP A 10 31.857 102.651 111.490 1.00 98.96 O ANISOU 9 O2P SEP A 10 11741 14206 11654 -1884 -2520 -931 O HETATM 10 O3P SEP A 10 33.673 103.987 110.290 1.00100.50 O ANISOU 10 O3P SEP A 10 11517 14503 12167 -2208 -2550 -1035 O