PDB Short entry for 4CBR HEADER TRANSFERASE 16-OCT-13 4CBR TITLE X-RAY STRUCTURE OF THE MORE STABLE HUMAN AGXT TRIPLE MUTANT (AGXT_HEM) COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERINE--PYRUVATE AMINOTRANSFERASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: SPT, ALANINE--GLYOXYLATE AMINOTRANSFERASE, AGT, ALANINE GLY COMPND 5 OXYLATE AMINOTRANSFERASE; COMPND 6 EC: 2.6.1.44; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: PLYSS KEYWDS TRANSFERASE, PRIMARY HIPEROXALURIA TYPE I EXPDTA X-RAY DIFFRACTION AUTHOR C.YUNTA,A.ALBERT REVDAT 3 20-DEC-23 4CBR 1 REMARK LINK REVDAT 2 03-SEP-14 4CBR 1 JRNL REVDAT 1 09-JUL-14 4CBR 0 JRNL AUTH N.MESA-TORRES,C.YUNTA,I.FABELO-ROSA,J.M.GONZALEZ-RUBIO, JRNL AUTH 2 J.M.SANCHEZ-RUIZ,E.SALIDO,A.ALBERT,A.L.PEY JRNL TITL THE CONSENSUS-BASED APPROACH FOR GENE/ENZYME REPLACEMENT JRNL TITL 2 THERAPIES AND CRYSTALLIZATION STRATEGIES: THE CASE OF HUMAN JRNL TITL 3 ALANINE:GLYOXYLATE AMINOTRANSFERASE. JRNL REF BIOCHEM.J. V. 462 453 2014 JRNL REFN ISSN 0264-6021 JRNL PMID 24957194 JRNL DOI 10.1042/BJ20140250 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.68 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.400 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 26556 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.222 REMARK 3 R VALUE (WORKING SET) : 0.220 REMARK 3 FREE R VALUE : 0.268 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2510 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.6855 - 6.0220 1.00 2611 124 0.1780 0.2045 REMARK 3 2 6.0220 - 4.7821 1.00 2618 128 0.1636 0.2003 REMARK 3 3 4.7821 - 4.1782 1.00 2616 128 0.1636 0.1842 REMARK 3 4 4.1782 - 3.7965 1.00 2606 143 0.1786 0.2305 REMARK 3 5 3.7965 - 3.5245 1.00 2606 138 0.1972 0.2989 REMARK 3 6 3.5245 - 3.3168 1.00 2570 165 0.2216 0.2751 REMARK 3 7 3.3168 - 3.1508 1.00 2589 152 0.2413 0.2468 REMARK 3 8 3.1508 - 3.0136 1.00 2569 167 0.2573 0.3115 REMARK 3 9 3.0136 - 2.8977 1.00 2592 154 0.2681 0.3462 REMARK 3 10 2.8977 - 2.7977 1.00 2603 130 0.2739 0.3554 REMARK 3 11 2.7977 - 2.7102 1.00 2616 136 0.2875 0.3392 REMARK 3 12 2.7102 - 2.6328 1.00 2620 152 0.2763 0.3722 REMARK 3 13 2.6328 - 2.5635 1.00 2562 148 0.2943 0.3623 REMARK 3 14 2.5635 - 2.5009 1.00 2609 130 0.3119 0.4042 REMARK 3 15 2.5009 - 2.4441 1.00 2643 111 0.3196 0.2923 REMARK 3 16 2.4441 - 2.3921 1.00 2637 119 0.3221 0.3556 REMARK 3 17 2.3921 - 2.3442 1.00 2607 121 0.3178 0.3689 REMARK 3 18 2.3442 - 2.3000 1.00 2573 164 0.3239 0.3672 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.30 REMARK 3 SHRINKAGE RADIUS : 1.11 REMARK 3 K_SOL : 0.32 REMARK 3 B_SOL : 40.25 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.790 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.270 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 6.01410 REMARK 3 B22 (A**2) : 6.01410 REMARK 3 B33 (A**2) : -12.02820 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 3061 REMARK 3 ANGLE : 1.302 4154 REMARK 3 CHIRALITY : 0.080 461 REMARK 3 PLANARITY : 0.007 533 REMARK 3 DIHEDRAL : 17.295 1132 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): -13.4842 13.1645 -20.9005 REMARK 3 T TENSOR REMARK 3 T11: -0.1769 T22: 0.5445 REMARK 3 T33: 0.1711 T12: 0.2843 REMARK 3 T13: -0.1904 T23: 0.0327 REMARK 3 L TENSOR REMARK 3 L11: 0.2539 L22: 0.0511 REMARK 3 L33: 0.2640 L12: 0.0796 REMARK 3 L13: 0.0427 L23: -0.0201 REMARK 3 S TENSOR REMARK 3 S11: 0.0780 S12: -0.5134 S13: 0.0418 REMARK 3 S21: 0.0652 S22: -0.1439 S23: 0.0226 REMARK 3 S31: 0.3720 S32: 0.2165 S33: -0.0229 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4CBR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 16-OCT-13. REMARK 100 THE DEPOSITION ID IS D_1290058741. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.93 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 49917 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 41.680 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 18.60 REMARK 200 R MERGE (I) : 0.11000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 21.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.42 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 18.90 REMARK 200 R MERGE FOR SHELL (I) : 0.03000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2YOB REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.19 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.25 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 15% PEG 10K; 0.1 M HEPES PH 7.5, 2.5% REMARK 280 V/V ISOPROPANOL AND 5% GLYCEROL AS ADDITIVE. REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 70.49500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 45.10000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 45.10000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 35.24750 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 45.10000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 45.10000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 105.74250 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 45.10000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 45.10000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 35.24750 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 45.10000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 45.10000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 105.74250 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 70.49500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9960 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25650 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -54.1 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -70.49500 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A2026 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 SER A 3 REMARK 465 LYS A 389 REMARK 465 LYS A 390 REMARK 465 LYS A 391 REMARK 465 LEU A 392 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 122 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP A 58 O HOH A 2034 1.93 REMARK 500 OG1 THR A 154 O HOH A 2054 1.94 REMARK 500 O PRO A 73 O HOH A 2037 1.96 REMARK 500 O ILE A 37 O HOH A 2021 1.97 REMARK 500 O TYR A 134 O HOH A 2058 1.98 REMARK 500 OD2 ASP A 196 O HOH A 2046 2.00 REMARK 500 O LEU A 136 O HOH A 2060 2.05 REMARK 500 O HOH A 2057 O HOH A 2105 2.13 REMARK 500 O ASN A 249 O HOH A 2081 2.18 REMARK 500 N LEU A 179 O HOH A 2062 2.18 REMARK 500 OE1 GLN A 385 O HOH A 2119 2.18 REMARK 500 O HOH A 2007 O HOH A 2008 2.18 REMARK 500 O LEU A 25 O HOH A 2012 2.19 REMARK 500 OD2 ASP A 98 NZ LYS A 229 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 69 74.45 57.73 REMARK 500 ASN A 72 117.33 -37.71 REMARK 500 SER A 81 -177.74 -60.84 REMARK 500 ALA A 104 47.13 -65.20 REMARK 500 PRO A 125 94.32 -65.27 REMARK 500 PRO A 130 101.46 -49.08 REMARK 500 LYS A 147 53.10 36.97 REMARK 500 LYS A 209 -120.53 -94.12 REMARK 500 PHE A 238 2.87 -66.23 REMARK 500 HIS A 261 -68.98 -126.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 600 REMARK 600 HETEROGEN REMARK 600 REMARK 600 PYRIDOXAL-5'-PHOSPHATE (PLP): SCHIFF BASE WITH K209 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PLP A 1389 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1390 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4CBS RELATED DB: PDB REMARK 900 X-RAY STRUCTURE OF QUINTUPLE MUTANT OF HUMAN ALANINE GLYOXYLATE REMARK 900 AMINOTRANSFERASE, AGXT_RHEAM DBREF 4CBR A 1 392 UNP P21549 SPYA_HUMAN 1 392 SEQADV 4CBR HIS A 48 UNP P21549 SER 48 ENGINEERED MUTATION SEQADV 4CBR GLU A 52 UNP P21549 ASP 52 ENGINEERED MUTATION SEQADV 4CBR MET A 340 UNP P21549 ILE 340 ENGINEERED MUTATION SEQRES 1 A 392 MET ALA SER HIS LYS LEU LEU VAL THR PRO PRO LYS ALA SEQRES 2 A 392 LEU LEU LYS PRO LEU SER ILE PRO ASN GLN LEU LEU LEU SEQRES 3 A 392 GLY PRO GLY PRO SER ASN LEU PRO PRO ARG ILE MET ALA SEQRES 4 A 392 ALA GLY GLY LEU GLN MET ILE GLY HIS MET SER LYS GLU SEQRES 5 A 392 MET TYR GLN ILE MET ASP GLU ILE LYS GLU GLY ILE GLN SEQRES 6 A 392 TYR VAL PHE GLN THR ARG ASN PRO LEU THR LEU VAL ILE SEQRES 7 A 392 SER GLY SER GLY HIS CYS ALA LEU GLU ALA ALA LEU VAL SEQRES 8 A 392 ASN VAL LEU GLU PRO GLY ASP SER PHE LEU VAL GLY ALA SEQRES 9 A 392 ASN GLY ILE TRP GLY GLN ARG ALA VAL ASP ILE GLY GLU SEQRES 10 A 392 ARG ILE GLY ALA ARG VAL HIS PRO MET THR LYS ASP PRO SEQRES 11 A 392 GLY GLY HIS TYR THR LEU GLN GLU VAL GLU GLU GLY LEU SEQRES 12 A 392 ALA GLN HIS LYS PRO VAL LEU LEU PHE LEU THR HIS GLY SEQRES 13 A 392 GLU SER SER THR GLY VAL LEU GLN PRO LEU ASP GLY PHE SEQRES 14 A 392 GLY GLU LEU CYS HIS ARG TYR LYS CYS LEU LEU LEU VAL SEQRES 15 A 392 ASP SER VAL ALA SER LEU GLY GLY THR PRO LEU TYR MET SEQRES 16 A 392 ASP ARG GLN GLY ILE ASP ILE LEU TYR SER GLY SER GLN SEQRES 17 A 392 LYS ALA LEU ASN ALA PRO PRO GLY THR SER LEU ILE SER SEQRES 18 A 392 PHE SER ASP LYS ALA LYS LYS LYS MET TYR SER ARG LYS SEQRES 19 A 392 THR LYS PRO PHE SER PHE TYR LEU ASP ILE LYS TRP LEU SEQRES 20 A 392 ALA ASN PHE TRP GLY CYS ASP ASP GLN PRO ARG MET TYR SEQRES 21 A 392 HIS HIS THR ILE PRO VAL ILE SER LEU TYR SER LEU ARG SEQRES 22 A 392 GLU SER LEU ALA LEU ILE ALA GLU GLN GLY LEU GLU ASN SEQRES 23 A 392 SER TRP ARG GLN HIS ARG GLU ALA ALA ALA TYR LEU HIS SEQRES 24 A 392 GLY ARG LEU GLN ALA LEU GLY LEU GLN LEU PHE VAL LYS SEQRES 25 A 392 ASP PRO ALA LEU ARG LEU PRO THR VAL THR THR VAL ALA SEQRES 26 A 392 VAL PRO ALA GLY TYR ASP TRP ARG ASP ILE VAL SER TYR SEQRES 27 A 392 VAL MET ASP HIS PHE ASP ILE GLU ILE MET GLY GLY LEU SEQRES 28 A 392 GLY PRO SER THR GLY LYS VAL LEU ARG ILE GLY LEU LEU SEQRES 29 A 392 GLY CYS ASN ALA THR ARG GLU ASN VAL ASP ARG VAL THR SEQRES 30 A 392 GLU ALA LEU ARG ALA ALA LEU GLN HIS CYS PRO LYS LYS SEQRES 31 A 392 LYS LEU HET PLP A1389 15 HET GOL A1390 6 HETNAM PLP PYRIDOXAL-5'-PHOSPHATE HETNAM GOL GLYCEROL HETSYN PLP VITAMIN B6 PHOSPHATE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 PLP C8 H10 N O6 P FORMUL 3 GOL C3 H8 O3 FORMUL 4 HOH *119(H2 O) HELIX 1 1 PRO A 34 GLY A 42 1 9 HELIX 2 2 SER A 50 GLN A 69 1 20 HELIX 3 3 SER A 81 LEU A 94 1 14 HELIX 4 4 GLY A 106 ILE A 119 1 14 HELIX 5 5 THR A 135 LYS A 147 1 13 HELIX 6 6 GLY A 168 TYR A 176 1 9 HELIX 7 7 SER A 223 TYR A 231 1 9 HELIX 8 8 ASP A 243 TRP A 251 1 9 HELIX 9 9 PRO A 265 GLY A 283 1 19 HELIX 10 10 GLY A 283 LEU A 305 1 23 HELIX 11 11 ASP A 313 LEU A 316 5 4 HELIX 12 12 ASP A 331 ASP A 344 1 14 HELIX 13 13 LEU A 351 THR A 355 5 5 HELIX 14 14 LEU A 364 ALA A 368 5 5 HELIX 15 15 THR A 369 CYS A 387 1 19 SHEET 1 AA 2 LEU A 24 LEU A 25 0 SHEET 2 AA 2 ILE A 345 GLU A 346 1 N GLU A 346 O LEU A 24 SHEET 1 AB 7 LEU A 74 ILE A 78 0 SHEET 2 AB 7 SER A 218 PHE A 222 -1 O SER A 218 N ILE A 78 SHEET 3 AB 7 ILE A 202 GLY A 206 -1 O LEU A 203 N SER A 221 SHEET 4 AB 7 LEU A 179 ASP A 183 1 O LEU A 180 N ILE A 202 SHEET 5 AB 7 LEU A 150 THR A 154 1 O LEU A 151 N LEU A 181 SHEET 6 AB 7 SER A 99 VAL A 102 1 O SER A 99 N LEU A 150 SHEET 7 AB 7 ARG A 122 PRO A 125 1 O ARG A 122 N PHE A 100 SHEET 1 AC 3 VAL A 321 ALA A 325 0 SHEET 2 AC 3 VAL A 358 GLY A 362 -1 O LEU A 359 N VAL A 324 SHEET 3 AC 3 MET A 348 GLY A 349 -1 O MET A 348 N ARG A 360 LINK NZ LYS A 209 C4A PLP A1389 1555 1555 1.36 CISPEP 1 GLY A 29 PRO A 30 0 4.59 SITE 1 AC1 14 SER A 81 GLY A 82 HIS A 83 TRP A 108 SITE 2 AC1 14 GLY A 156 SER A 158 ASP A 183 VAL A 185 SITE 3 AC1 14 ALA A 186 GLN A 208 LYS A 209 TYR A 260 SITE 4 AC1 14 THR A 263 GOL A1390 SITE 1 AC2 8 PRO A 28 HIS A 48 LYS A 209 TYR A 260 SITE 2 AC2 8 LEU A 351 ARG A 360 PLP A1389 HOH A2088 CRYST1 90.200 90.200 140.990 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011086 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011086 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007093 0.00000