PDB Short entry for 4CGX HEADER TRANSCRIPTION 27-NOV-13 4CGX TITLE CRYSTAL STRUCTURE OF THE N-TERMINAL DOMAIN OF THE PA TITLE 2 SUBUNIT OF THOGOTO VIRUS POLYMERASE (FORM 1) COMPND MOL_ID: 1; COMPND 2 MOLECULE: POLYMERASE ACIDIC PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: N-TERMINAL DOMAIN, RESIDUES 1-170; COMPND 5 SYNONYM: RNA-DIRECTED RNA POLYMERASE SUBUNIT P3; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THOGOTO VIRUS; SOURCE 3 ORGANISM_TAXID: 11569; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VARIANT: CODON PLUS-RIL; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PET-M11 KEYWDS TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR D.GUILLIGAY,J.KADLEC,T.CREPIN,T.LUNARDI,D.BOUVIER,G.KOCHS, AUTHOR 2 R.W.H.RUIGROK,S.CUSACK REVDAT 1 05-FEB-14 4CGX 0 JRNL AUTH D.GUILLIGAY,J.KADLEC,T.CREPIN,T.LUNARDI,D.BOUVIER,G.KOCHS, JRNL AUTH 2 R.W.H.RUIGROK,S.CUSACK JRNL TITL COMPARATIVE STRUCTURAL AND FUNCTIONAL ANALYSIS OF JRNL TITL 2 ORTHOMYXOVIRUS POLYMERASE CAP-SNATCHING DOMAINS. JRNL REF PLOS ONE V. 9 84973 2014 JRNL REFN ISSN 1932-6203 JRNL PMID 24454773 JRNL DOI 10.1371/JOURNAL.PONE.0084973 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VICENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.700 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.815 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.35 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.53 REMARK 3 NUMBER OF REFLECTIONS : 9876 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.2035 REMARK 3 R VALUE (WORKING SET) : 0.1997 REMARK 3 FREE R VALUE : 0.2797 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.8 REMARK 3 FREE R VALUE TEST SET COUNT : 471 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.8202 - 3.8935 0.99 3186 160 0.1779 0.2368 REMARK 3 2 3.8935 - 3.0907 0.99 3128 148 0.2113 0.3279 REMARK 3 3 3.0907 - 2.7001 0.98 3091 163 0.2599 0.3482 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.45 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.82 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 56.29 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 2659 REMARK 3 ANGLE : 0.822 3615 REMARK 3 CHIRALITY : 0.036 401 REMARK 3 PLANARITY : 0.003 461 REMARK 3 DIHEDRAL : 13.902 965 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 11 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND (RESID 3 THROUGH 27 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.5039 -38.3452 13.4232 REMARK 3 T TENSOR REMARK 3 T11: 0.9979 T22: 0.4371 REMARK 3 T33: 0.8275 T12: 0.1385 REMARK 3 T13: 0.3326 T23: 0.0550 REMARK 3 L TENSOR REMARK 3 L11: 4.1366 L22: 1.8998 REMARK 3 L33: 4.4135 L12: -0.8420 REMARK 3 L13: 1.5028 L23: -2.3113 REMARK 3 S TENSOR REMARK 3 S11: -0.3904 S12: 0.4243 S13: -0.6758 REMARK 3 S21: 0.0009 S22: -0.3859 S23: 0.0628 REMARK 3 S31: 1.6652 S32: 0.6137 S33: -0.0167 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND (RESID 28 THROUGH 47 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.2807 -32.5237 20.0672 REMARK 3 T TENSOR REMARK 3 T11: 0.6146 T22: 0.6069 REMARK 3 T33: 0.5685 T12: 0.2014 REMARK 3 T13: 0.1810 T23: 0.2157 REMARK 3 L TENSOR REMARK 3 L11: 0.6888 L22: 2.9122 REMARK 3 L33: 3.4000 L12: -0.2385 REMARK 3 L13: 0.8709 L23: 0.5962 REMARK 3 S TENSOR REMARK 3 S11: -0.6251 S12: -0.4480 S13: -0.4817 REMARK 3 S21: -0.5640 S22: -0.4778 S23: -0.1273 REMARK 3 S31: 1.2848 S32: 1.2127 S33: 0.1654 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN A AND (RESID 48 THROUGH 74 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.1037 -19.8790 13.7154 REMARK 3 T TENSOR REMARK 3 T11: 0.5707 T22: 0.3047 REMARK 3 T33: 0.4469 T12: -0.0664 REMARK 3 T13: 0.0022 T23: 0.0131 REMARK 3 L TENSOR REMARK 3 L11: 4.2392 L22: 4.3914 REMARK 3 L33: 2.8414 L12: -2.2913 REMARK 3 L13: 1.7393 L23: -0.2900 REMARK 3 S TENSOR REMARK 3 S11: -0.0137 S12: -0.0273 S13: 0.5939 REMARK 3 S21: -0.1799 S22: -0.2310 S23: -0.0782 REMARK 3 S31: -0.3289 S32: 0.0159 S33: 0.2482 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN A AND (RESID 75 THROUGH 86 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.6640 -15.3089 12.5743 REMARK 3 T TENSOR REMARK 3 T11: 0.6104 T22: 0.4640 REMARK 3 T33: 0.5601 T12: -0.1425 REMARK 3 T13: 0.1510 T23: 0.1226 REMARK 3 L TENSOR REMARK 3 L11: 5.6610 L22: 5.3120 REMARK 3 L33: 5.4690 L12: -0.9493 REMARK 3 L13: -1.3158 L23: 0.2334 REMARK 3 S TENSOR REMARK 3 S11: 1.2266 S12: -0.1953 S13: 0.8318 REMARK 3 S21: -1.1269 S22: -1.3170 S23: -1.0084 REMARK 3 S31: -0.0750 S32: 0.3371 S33: 0.2759 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN A AND (RESID 87 THROUGH 114 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.4861 -18.4830 25.2108 REMARK 3 T TENSOR REMARK 3 T11: 0.5605 T22: 0.7866 REMARK 3 T33: 0.6020 T12: -0.2238 REMARK 3 T13: -0.0012 T23: 0.0372 REMARK 3 L TENSOR REMARK 3 L11: 2.8081 L22: 3.6353 REMARK 3 L33: 5.7743 L12: -0.7151 REMARK 3 L13: 1.4300 L23: -1.7678 REMARK 3 S TENSOR REMARK 3 S11: -0.3617 S12: -0.3842 S13: 0.0692 REMARK 3 S21: 0.5937 S22: -0.1435 S23: -0.5073 REMARK 3 S31: -1.6551 S32: 1.6580 S33: 0.2534 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN A AND (RESID 115 THROUGH 126 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.2377 -25.4768 31.0567 REMARK 3 T TENSOR REMARK 3 T11: 0.4831 T22: 1.1089 REMARK 3 T33: 0.5325 T12: 0.0398 REMARK 3 T13: -0.1375 T23: 0.1583 REMARK 3 L TENSOR REMARK 3 L11: 4.6967 L22: 2.3493 REMARK 3 L33: 5.8443 L12: -2.2743 REMARK 3 L13: 0.2047 L23: 2.2291 REMARK 3 S TENSOR REMARK 3 S11: -0.1703 S12: -1.3578 S13: -0.0032 REMARK 3 S21: 0.5006 S22: 0.5180 S23: -0.6196 REMARK 3 S31: 0.1362 S32: 1.6661 S33: 0.8949 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN A AND (RESID 127 THROUGH 134 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.4307 -19.3791 33.2573 REMARK 3 T TENSOR REMARK 3 T11: 0.8464 T22: 0.6693 REMARK 3 T33: 0.4336 T12: -0.1226 REMARK 3 T13: -0.1827 T23: 0.0502 REMARK 3 L TENSOR REMARK 3 L11: 2.6560 L22: 9.0007 REMARK 3 L33: 2.2092 L12: 0.1452 REMARK 3 L13: 0.1164 L23: 0.4030 REMARK 3 S TENSOR REMARK 3 S11: 0.0168 S12: -0.5915 S13: 0.4040 REMARK 3 S21: 0.3798 S22: 0.1726 S23: -0.0048 REMARK 3 S31: -0.5347 S32: 1.0382 S33: 0.3476 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN A AND (RESID 135 THROUGH 154 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.0076 -36.4262 30.2566 REMARK 3 T TENSOR REMARK 3 T11: 0.8673 T22: 0.6261 REMARK 3 T33: 0.6741 T12: 0.1259 REMARK 3 T13: 0.3786 T23: 0.2447 REMARK 3 L TENSOR REMARK 3 L11: 3.9535 L22: 7.4649 REMARK 3 L33: 1.7541 L12: -3.5139 REMARK 3 L13: -0.8763 L23: 2.9595 REMARK 3 S TENSOR REMARK 3 S11: -1.0395 S12: -0.4447 S13: -1.0209 REMARK 3 S21: 0.6506 S22: -0.0443 S23: 0.2075 REMARK 3 S31: 1.5949 S32: 0.5296 S33: 0.6829 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN A AND (RESID 155 THROUGH 165 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.0291 -39.5809 25.8633 REMARK 3 T TENSOR REMARK 3 T11: 0.5881 T22: 1.3150 REMARK 3 T33: 0.7198 T12: 0.2612 REMARK 3 T13: 0.0559 T23: 0.3825 REMARK 3 L TENSOR REMARK 3 L11: 2.3858 L22: 9.4945 REMARK 3 L33: 1.7259 L12: -0.0918 REMARK 3 L13: -0.3222 L23: -1.6897 REMARK 3 S TENSOR REMARK 3 S11: -0.4216 S12: -0.7092 S13: -1.2273 REMARK 3 S21: 0.1466 S22: -0.4199 S23: -1.4772 REMARK 3 S31: 0.8757 S32: 2.1289 S33: 0.2763 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN B AND (RESID 2 THROUGH 100 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.2947 -19.5673 -1.2141 REMARK 3 T TENSOR REMARK 3 T11: 0.6596 T22: 0.6369 REMARK 3 T33: 0.4585 T12: 0.0356 REMARK 3 T13: -0.1195 T23: 0.0069 REMARK 3 L TENSOR REMARK 3 L11: 3.2536 L22: 6.8033 REMARK 3 L33: 0.4833 L12: 1.2490 REMARK 3 L13: -1.3221 L23: -0.6292 REMARK 3 S TENSOR REMARK 3 S11: -0.5236 S12: 0.8652 S13: 0.4157 REMARK 3 S21: -1.1007 S22: 0.3085 S23: 0.1696 REMARK 3 S31: -0.2612 S32: -0.4132 S33: 0.1685 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN B AND (RESID 101 THROUGH 166 ) REMARK 3 ORIGIN FOR THE GROUP (A): -26.0489 -31.7181 9.5162 REMARK 3 T TENSOR REMARK 3 T11: 0.3480 T22: 0.4068 REMARK 3 T33: 0.4474 T12: 0.0233 REMARK 3 T13: -0.0381 T23: -0.0254 REMARK 3 L TENSOR REMARK 3 L11: 3.4842 L22: 2.5146 REMARK 3 L33: 3.8365 L12: 1.1927 REMARK 3 L13: 0.1967 L23: 1.3237 REMARK 3 S TENSOR REMARK 3 S11: 0.0012 S12: -0.0918 S13: -0.5914 REMARK 3 S21: 0.2160 S22: -0.3982 S23: 0.2209 REMARK 3 S31: 0.3363 S32: -0.5284 S33: 0.2412 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 SELECTION : CHAIN A AND SEGID A REMARK 3 SELECTION : CHAIN B AND SEGID B REMARK 3 RESTRAINED TORSIONS: 1801 REMARK 3 BELOW LIMIT RMSD : 1.528 REMARK 3 ALL RESTRAINT RMSD : 11.331 REMARK 3 HISTOGRAM OF DIFFERENCES UNDER LIMIT: REMARK 3 0.000 - 1.500: 1412 REMARK 3 1.500 - 3.000: 228 REMARK 3 3.000 - 4.500: 56 REMARK 3 4.500 - 6.000: 20 REMARK 3 6.000 - 7.500: 11 REMARK 3 7.500 - 9.000: 2 REMARK 3 9.000 - 10.500: 3 REMARK 3 10.500 - 12.000: 1 REMARK 3 12.000 - 13.500: 1 REMARK 3 13.500 - 15.000: 1 REMARK 3 HISTOGRAM OF DIFFERENCES OVER LIMIT: REMARK 3 15.000 - 22.500: 8 REMARK 3 22.500 - 30.000: 5 REMARK 3 30.000 - 37.500: 9 REMARK 3 37.500 - 45.000: 8 REMARK 3 45.000 - 52.500: 5 REMARK 3 52.500 - 60.000: 5 REMARK 3 60.000 - 67.500: 3 REMARK 3 67.500 - 75.000: 3 REMARK 3 75.000 - 82.500: 7 REMARK 3 82.500 - 90.000: 13 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4CGX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 27-NOV-13. REMARK 100 THE PDBE ID CODE IS EBI-59087. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-NOV-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM14 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9786 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD (MARCCD 225) REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 9879 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.70 REMARK 200 RESOLUTION RANGE LOW (A) : 50.00 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.0 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 200 DATA REDUNDANCY : 3.8 REMARK 200 R MERGE (I) : 0.08 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 13.50 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.8 REMARK 200 R MERGE FOR SHELL (I) : 0.68 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.10 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 4CGS REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.32 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M MGCL2, 0.1 M MES PH 6.5 REMARK 280 AND 22% PEG 4000 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 41.96500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 38.61500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 41.96500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 38.61500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1780 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17640 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.5 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -6 REMARK 465 MSE A -5 REMARK 465 GLY A -4 REMARK 465 SER A -3 REMARK 465 GLY A -2 REMARK 465 MSE A -1 REMARK 465 ALA A 0 REMARK 465 MSE A 1 REMARK 465 THR A 2 REMARK 465 HIS A 51 REMARK 465 ARG A 52 REMARK 465 SER A 166 REMARK 465 GLY A 167 REMARK 465 GLU A 168 REMARK 465 ALA A 169 REMARK 465 LYS A 170 REMARK 465 GLY B -6 REMARK 465 MSE B -5 REMARK 465 GLY B -4 REMARK 465 SER B -3 REMARK 465 GLY B -2 REMARK 465 MSE B -1 REMARK 465 ALA B 0 REMARK 465 MSE B 1 REMARK 465 MSE B 48 REMARK 465 HIS B 49 REMARK 465 THR B 50 REMARK 465 HIS B 51 REMARK 465 ARG B 52 REMARK 465 GLY B 53 REMARK 465 ALA B 54 REMARK 465 GLU B 91 REMARK 465 GLU B 168 REMARK 465 ALA B 169 REMARK 465 LYS B 170 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLY B 167 CA C O REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 27 54.02 -114.31 REMARK 500 ARG A 82 -72.71 -62.34 REMARK 500 SER A 105 -70.24 -53.41 REMARK 500 PRO A 109 127.66 -30.58 REMARK 500 LEU A 157 32.73 -94.20 REMARK 500 VAL B 77 -75.37 -101.88 REMARK 500 LEU B 157 31.20 -91.89 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4CGS RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE N-TERMINAL DOMAIN OF THE PA REMARK 900 SUBUNIT OF DHORI VIRUS POLYMERASE REMARK 900 RELATED ID: 4CHC RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE N-TERMINAL DOMAIN OF THE PA REMARK 900 SUBUNIT OF THOGOTO VIRUS POLYMERASE (FORM 2) REMARK 900 RELATED ID: 4CHD RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE '627' DOMAIN OF THE PB2 REMARK 900 SUBUNIT OF THOGOTO VIRUS POLYMERASE REMARK 900 RELATED ID: 4CHE RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE PUTATIVE CAP-BINDING DOMAIN REMARK 900 OF THE PB2 SUBUNIT OF THOGOTO VIRUS POLYMERASE REMARK 900 RELATED ID: 4CHF RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE PUTATIVE CAP-BINDING DOMAIN REMARK 900 OF THE PB2 SUBUNIT OF THOGOTO VIRUS POLYMERASE (FORM REMARK 900 2) REMARK 999 REMARK 999 SEQUENCE REMARK 999 EXTRA GMGSG AT N-TERMINAL AFTER HIS-TAG CLEAVAGE DBREF 4CGX A 1 170 UNP P27194 PA_THOGV 1 170 DBREF 4CGX B 1 170 UNP P27194 PA_THOGV 1 170 SEQADV 4CGX GLY A -6 UNP P27194 EXPRESSION TAG SEQADV 4CGX MSE A -5 UNP P27194 EXPRESSION TAG SEQADV 4CGX GLY A -4 UNP P27194 EXPRESSION TAG SEQADV 4CGX SER A -3 UNP P27194 EXPRESSION TAG SEQADV 4CGX GLY A -2 UNP P27194 EXPRESSION TAG SEQADV 4CGX MSE A -1 UNP P27194 EXPRESSION TAG SEQADV 4CGX ALA A 0 UNP P27194 EXPRESSION TAG SEQADV 4CGX GLY B -6 UNP P27194 EXPRESSION TAG SEQADV 4CGX MSE B -5 UNP P27194 EXPRESSION TAG SEQADV 4CGX GLY B -4 UNP P27194 EXPRESSION TAG SEQADV 4CGX SER B -3 UNP P27194 EXPRESSION TAG SEQADV 4CGX GLY B -2 UNP P27194 EXPRESSION TAG SEQADV 4CGX MSE B -1 UNP P27194 EXPRESSION TAG SEQADV 4CGX ALA B 0 UNP P27194 EXPRESSION TAG SEQRES 1 A 177 GLY MSE GLY SER GLY MSE ALA MSE THR ASP ARG PRO ASP SEQRES 2 A 177 HIS ILE ASP SER ARG VAL TRP GLU LEU SER GLU THR GLN SEQRES 3 A 177 GLU ASP TRP ILE THR GLN VAL HIS GLY HIS VAL ARG ARG SEQRES 4 A 177 VAL VAL GLU CYS TRP LYS TYR THR ILE CYS CYS LEU ILE SEQRES 5 A 177 SER ASN MSE HIS THR HIS ARG GLY ALA PRO GLN TYR ASP SEQRES 6 A 177 VAL PHE LYS TRP GLN ASP ARG SER THR ILE GLU TRP ILE SEQRES 7 A 177 CYS SER LYS LYS LYS VAL GLN TYR PRO GLU ARG ASP THR SEQRES 8 A 177 PRO ASP LEU TYR ASP ASN GLU ARG ALA VAL ALA TYR LYS SEQRES 9 A 177 VAL LEU LEU VAL SER ASP LEU SER ASP HIS SER PRO THR SEQRES 10 A 177 SER GLY ILE TYR HIS ASP LEU ALA PHE ASN LEU GLU GLY SEQRES 11 A 177 GLU ALA GLU GLU SER CYS ALA LEU VAL LEU ARG GLY SER SEQRES 12 A 177 GLN LEU GLN ASP ILE LYS GLY PHE LEU CYS ARG ALA LEU SEQRES 13 A 177 GLU TRP VAL VAL SER ASN ASN LEU THR GLN GLU VAL VAL SEQRES 14 A 177 GLU THR ILE SER GLY GLU ALA LYS SEQRES 1 B 177 GLY MSE GLY SER GLY MSE ALA MSE THR ASP ARG PRO ASP SEQRES 2 B 177 HIS ILE ASP SER ARG VAL TRP GLU LEU SER GLU THR GLN SEQRES 3 B 177 GLU ASP TRP ILE THR GLN VAL HIS GLY HIS VAL ARG ARG SEQRES 4 B 177 VAL VAL GLU CYS TRP LYS TYR THR ILE CYS CYS LEU ILE SEQRES 5 B 177 SER ASN MSE HIS THR HIS ARG GLY ALA PRO GLN TYR ASP SEQRES 6 B 177 VAL PHE LYS TRP GLN ASP ARG SER THR ILE GLU TRP ILE SEQRES 7 B 177 CYS SER LYS LYS LYS VAL GLN TYR PRO GLU ARG ASP THR SEQRES 8 B 177 PRO ASP LEU TYR ASP ASN GLU ARG ALA VAL ALA TYR LYS SEQRES 9 B 177 VAL LEU LEU VAL SER ASP LEU SER ASP HIS SER PRO THR SEQRES 10 B 177 SER GLY ILE TYR HIS ASP LEU ALA PHE ASN LEU GLU GLY SEQRES 11 B 177 GLU ALA GLU GLU SER CYS ALA LEU VAL LEU ARG GLY SER SEQRES 12 B 177 GLN LEU GLN ASP ILE LYS GLY PHE LEU CYS ARG ALA LEU SEQRES 13 B 177 GLU TRP VAL VAL SER ASN ASN LEU THR GLN GLU VAL VAL SEQRES 14 B 177 GLU THR ILE SER GLY GLU ALA LYS MODRES 4CGX MSE A 48 MET SELENOMETHIONINE HET MSE A 48 8 HETNAM MSE SELENOMETHIONINE FORMUL 3 MSE C5 H11 N O2 SE HELIX 1 1 ASP A 9 GLU A 17 1 9 HELIX 2 2 THR A 18 GLU A 20 5 3 HELIX 3 3 HIS A 27 SER A 46 1 20 HELIX 4 4 ASP A 64 LYS A 75 1 12 HELIX 5 5 GLU A 126 LEU A 133 1 8 HELIX 6 6 ARG A 134 ASN A 155 1 22 HELIX 7 7 LEU A 157 THR A 164 1 8 HELIX 8 8 ASP B 9 GLU B 17 1 9 HELIX 9 9 THR B 18 GLU B 20 5 3 HELIX 10 10 HIS B 27 ASN B 47 1 21 HELIX 11 11 ARG B 65 LYS B 76 1 12 HELIX 12 12 GLU B 126 LEU B 133 1 8 HELIX 13 13 ARG B 134 ASN B 155 1 22 HELIX 14 14 LEU B 157 SER B 166 1 10 SHEET 1 AA 4 TYR A 57 VAL A 59 0 SHEET 2 AA 4 LEU A 87 ASP A 89 -1 O TYR A 88 N ASP A 58 SHEET 3 AA 4 VAL A 94 LEU A 100 -1 O VAL A 94 N ASP A 89 SHEET 4 AA 4 HIS A 115 PHE A 119 1 O HIS A 115 N LYS A 97 SHEET 1 BA 4 TYR B 57 VAL B 59 0 SHEET 2 BA 4 LEU B 87 ASP B 89 -1 O TYR B 88 N ASP B 58 SHEET 3 BA 4 VAL B 94 LEU B 100 -1 O VAL B 94 N ASP B 89 SHEET 4 BA 4 TYR B 114 PHE B 119 1 O HIS B 115 N LYS B 97 LINK C ASN A 47 N MSE A 48 1555 1555 1.33 LINK C MSE A 48 N HIS A 49 1555 1555 1.33 CRYST1 83.930 77.230 67.750 90.00 123.27 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011915 0.000000 0.007818 0.00000 SCALE2 0.000000 0.012948 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017654 0.00000