PDB Short entry for 4DPV HEADER VIRUS/DNA 01-FEB-96 4DPV TITLE PARVOVIRUS/DNA COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA (5'-D(*AP*TP*AP*CP*CP*TP*CP*TP*TP*GP*C)-3'); COMPND 3 CHAIN: N; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: PROTEIN (PARVOVIRUS COAT PROTEIN); COMPND 7 CHAIN: Z SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 MOL_ID: 2; SOURCE 4 ORGANISM_SCIENTIFIC: CANINE PARVOVIRUS; SOURCE 5 ORGANISM_TAXID: 10788; SOURCE 6 STRAIN: D; SOURCE 7 CELL_LINE: CULTURED IN CANINE A72 CELL LINE KEYWDS COMPLEX (VIRUS-DNA), FULL CAPSID, SINGLE-STRANDED DNA, VIRUS, KEYWDS 2 ICOSAHEDRAL VIRUS, VIRUS-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR M.S.CHAPMAN,M.G.ROSSMANN REVDAT 3 19-APR-23 4DPV 1 REMARK LINK CRYST1 MTRIX REVDAT 3 2 1 ATOM REVDAT 2 24-FEB-09 4DPV 1 VERSN REVDAT 1 01-APR-97 4DPV 0 SPRSDE 01-APR-97 4DPV 3DPV JRNL AUTH Q.XIE,M.S.CHAPMAN JRNL TITL CANINE PARVOVIRUS CAPSID STRUCTURE, ANALYZED AT 2.9 A JRNL TITL 2 RESOLUTION. JRNL REF J.MOL.BIOL. V. 264 497 1996 JRNL REFN ISSN 0022-2836 JRNL PMID 8969301 JRNL DOI 10.1006/JMBI.1996.0657 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH M.S.CHAPMAN,M.G.ROSSMANN REMARK 1 TITL STRUCTURAL REFINEMENT OF THE DNA-CONTAINING CAPSID OF CANINE REMARK 1 TITL 2 PARVOVIRUS USING A NEW RESTRAINED REAL SPACE METHOD REMARK 1 REF ACTA CRYSTALLOGR.,SECT.D V. 52 129 1996 REMARK 1 REFN ISSN 0907-4449 REMARK 1 REFERENCE 2 REMARK 1 AUTH M.S.CHAPMAN,M.G.ROSSMANN REMARK 1 TITL SINGLE-STRANDED DNA-PROTEIN INTERACTIONS IN CANINE REMARK 1 TITL 2 PARVOVIRUS REMARK 1 REF STRUCTURE V. 3 151 1995 REMARK 1 REFN ISSN 0969-2126 REMARK 1 REFERENCE 3 REMARK 1 AUTH M.S.CHAPMAN REMARK 1 TITL RESTRAINED REAL-SPACE MACROMOLECULAR ATOMIC REFINEMENT USING REMARK 1 TITL 2 A NEW RESOLUTION- DEPENDENT ELECTRON DENSITY FUNCTION REMARK 1 REF ACTA CRYSTALLOGR.,SECT.A V. 51 69 1995 REMARK 1 REFN ISSN 0108-7673 REMARK 1 REFERENCE 4 REMARK 1 AUTH M.S.CHAPMAN,M.G.ROSSMANN REMARK 1 TITL STRUCTURE, SEQUENCE, AND FUNCTION CORRELATIONS AMONG REMARK 1 TITL 2 PARVOVIRUSES REMARK 1 REF VIROLOGY V. 194 491 1993 REMARK 1 REFN ISSN 0042-6822 REMARK 1 REFERENCE 5 REMARK 1 AUTH M.S.CHAPMAN,J.TSAO,M.G.ROSSMANN REMARK 1 TITL AB INITIO PHASE DETERMINATION FOR SPHERICAL VIRUSES: REMARK 1 TITL 2 PARAMETER DETERMINATION FOR SPHERICAL-SHELL MODELS REMARK 1 REF ACTA CRYSTALLOGR.,SECT.A V. 48 301 1992 REMARK 1 REFN ISSN 0108-7673 REMARK 1 REFERENCE 6 REMARK 1 AUTH J.TSAO,M.S.CHAPMAN,H.WU,M.AGBANDJE,W.KELLER,M.G.ROSSMANN REMARK 1 TITL STRUCTURE DETERMINATION OF MONOCLINIC CANINE PARVOVIRUS REMARK 1 REF ACTA CRYSTALLOGR.,SECT.B V. 48 75 1992 REMARK 1 REFN ISSN 0108-7681 REMARK 1 REFERENCE 7 REMARK 1 AUTH J.TSAO,M.S.CHAPMAN,M.AGBANDJE,W.KELLER,K.SMITH,H.WU,M.LUO, REMARK 1 AUTH 2 T.J.SMITH,M.G.ROSSMANN,R.W.COMPANS,ET AL. REMARK 1 TITL THE THREE-DIMENSIONAL STRUCTURE OF CANINE PARVOVIRUS AND ITS REMARK 1 TITL 2 FUNCTIONAL IMPLICATIONS REMARK 1 REF SCIENCE V. 251 1456 1991 REMARK 1 REFN ISSN 0036-8075 REMARK 1 REFERENCE 8 REMARK 1 AUTH M.LUO,J.TSAO,M.G.ROSSMANN,S.BASAK,R.W.COMPANS REMARK 1 TITL PRELIMINARY X-RAY CRYSTALLOGRAPHIC ANALYSIS OF CANINE REMARK 1 TITL 2 PARVOVIRUS CRYSTALS REMARK 1 REF J.MOL.BIOL. V. 200 209 1988 REMARK 1 REFN ISSN 0022-2836 REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : TNT REMARK 3 AUTHORS : TRONRUD,TEN EYCK,MATTHEWS REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : NULL REMARK 3 DATA CUTOFF (SIGMA(F)) : 3.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 557776 REMARK 3 REMARK 3 USING DATA ABOVE SIGMA CUTOFF. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : NULL REMARK 3 FREE R VALUE : 0.283 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 USING ALL DATA, NO SIGMA CUTOFF. REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : NULL REMARK 3 FREE R VALUE (NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4390 REMARK 3 NUCLEIC ACID ATOMS : 212 REMARK 3 HETEROGEN ATOMS : 4 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 WILSON B VALUE (FROM FCALC, A**2) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. RMS WEIGHT COUNT REMARK 3 BOND LENGTHS (A) : 0.018 ; NULL ; NULL REMARK 3 BOND ANGLES (DEGREES) : 2.700 ; NULL ; NULL REMARK 3 TORSION ANGLES (DEGREES) : 15.400; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES (DEGREES) : NULL ; NULL ; NULL REMARK 3 TRIGONAL CARBON PLANES (A) : 0.016 ; NULL ; NULL REMARK 3 GENERAL PLANES (A) : 0.024 ; NULL ; NULL REMARK 3 ISOTROPIC THERMAL FACTORS (A**2) : NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS (A) : 0.110 ; NULL ; 166 REMARK 3 REMARK 3 INCORRECT CHIRAL-CENTERS (COUNT) : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 RESTRAINT LIBRARIES. REMARK 3 STEREOCHEMISTRY : NULL REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 ELEVEN NUCLEOTIDES OF THE GENOMIC SINGLE-STRANDED DNA ARE REMARK 3 BOUND TO EACH OF THE 60 PROTOMERS OF THE CAPSID, TOGETHER REMARK 3 CONSTITUTING 13 PERCENT OF THE GENOME. THE ELECTRON REMARK 3 DENSITY IS THE AVERAGE OF UP TO 60 DIFFERENT REGIONS OF THE REMARK 3 DNA SEQUENCE. THUS, THE ELECTRON DENSITY FOR EACH BASE IS REMARK 3 EXPECTED TO BE BLURRED AS IT IS THE AVERAGE OF MANY BASES. REMARK 3 HOWEVER, FOR MANY OF THE NUCLEOTIDES, THE ELECTRON DENSITY REMARK 3 IS DISTINCTIVE FOR PURINE OR PYRIMIDINE, AND IN SOME CASES REMARK 3 FOR INDIVIDUAL BASE-TYPE. THIS SHOWS THAT THERE IS SOME REMARK 3 SEQUENCE PREFERENCE. THERE ARE 30+ REGIONS OF THE REMARK 3 ENCAPSIDATED GENOMIC SEQUENCE THAT SATISFY THIS PREFERENCE REMARK 3 (SEE *JRNL* REFERENCE), BUT THE HOMOLOGY BETWEEN THEM IS REMARK 3 WEAK. THE BASE-TYPES OF THE DNA MODEL WERE CHOSEN TO FIT REMARK 3 THE ELECTRON DENSITY AND STERIC CONSTRAINTS BEST, AND IS REMARK 3 THEREFORE SIMILAR TO THE CONSENSUS OF THE VIRAL SEQUENCES REMARK 3 THAT BIND. NOTE THAT THE SEQUENCE OF THE DNA IN THE REMARK 3 GENBANK ENTRY PVCPVC IS THE NEGATIVE OF THE SEQUENCE THAT REMARK 3 IS ENCAPSIDATED IN THE VIRION. REMARK 3 REMARK 3 STRONG ELECTRON DENSITY BEGINS AT THE 37TH RESIDUE OF VP2. REMARK 3 DIFFUSE DENSITY CONNECTS GLY 37 ON THE INSIDE SURFACE TO REMARK 3 GLY 22 ON THE OUTER SURFACE, PASSING ALONG THE FIVE-FOLD REMARK 3 AXIS, SO THAT AT MOST ONE IN FIVE OF THE N-TERMINI ARE REMARK 3 EXTERNAL. AN OCCUPANCY FOR RESIDUES 24 TO 34 WAS OPTIMIZED REMARK 3 AGAINST THE ELECTRON DENSITY AND FREE R-FACTOR. 13% OF REMARK 3 N-TERMINI ARE EXTERNAL, MEANING THAT 65% OF FIVE-FOLD PORES REMARK 3 ARE OCCUPIED BY POLYPEPTIDES FROM ONE OF THE FIVE REMARK 3 SURROUNDING PROTEINS. N-TERMINI FROM THE INSIDE OF THE REMARK 3 CAPSID LIKELY JOIN AT RESIDUE 35, BUT THERE IS INADEQUATE REMARK 3 ELECTRON DENSITY FOR MODELING OF THE ALTERNATIVE N-TERMINAL REMARK 3 CONFORMATIONS. SEE CITATION IN *JRNL* RECORDS FOR REMARK 3 ADDITIONAL DETAILS. REMARK 3 REMARK 3 REAL-SPACE R-FACTORS (CHAPMAN, MS (1995) ACTA CRYST A51:69) REMARK 3 - A MEASURE OF LOCAL RELATIVE RELIABILITY (LOW IS GOOD). REMARK 3 (5 BLOCKS, EACH WITH 3 COLUMNS: RESIDUE #; MAIN CHAIN R; REMARK 3 SIDE CHAIN R). FOR DETAILS SEE *JRNL* CITATION. REMARK 3 REMARK 3 RESIDUE RESIDUE RESIDUE RESIDUE RESIDUE REMARK 3 MAIN CHAIN MAIN CHAIN MAIN CHAIN MAIN CHAIN MAIN REMARK 3 SIDE CHAIN SIDE CHAIN SIDE CHAIN SIDE CHAIN SIDE REMARK 3 NUCLEIC ACID: PROTEIN: REMARK 3 1 28% 24% 125 20% 26% 240 29% 28% 355 25% 39% 470 28% 26% REMARK 3 2 28% 35% 126 19% 23% 241 24% 34% 356 19% 21% 471 32% 34% REMARK 3 3 35% 37% 127 20% 35% 242 19% 31% 357 19% 27% 472 28% 32% REMARK 3 4 24% 26% 128 21% 37% 243 17% 25% 358 18% 473 23% 29% REMARK 3 5 20% 25% 129 18% 23% 244 19% 28% 359 18% 474 23% 36% REMARK 3 6 23% 29% 130 21% 34% 245 22% 25% 360 16% 475 19% 23% REMARK 3 7 34% 33% 131 24% 37% 246 23% 38% 361 19% 26% 476 23% 31% REMARK 3 8 24% 38% 132 22% 27% 247 20% 21% 362 24% 477 21% 23% REMARK 3 9 31% 32% 133 22% 33% 248 24% 32% 363 25% 478 22% 35% REMARK 3 10 28% 36% 134 21% 24% 249 25% 34% 364 25% 479 23% 42% REMARK 3 11 28% 35% 135 22% 24% 250 23% 31% 365 26% 32% 480 25% 31% REMARK 3 PROTEIN: 136 21% 35% 251 18% 23% 366 24% 31% 481 19% 32% REMARK 3 22 35% 137 20% 28% 252 15% 28% 367 20% 25% 482 21% 29% REMARK 3 23 33% 48% 138 24% 46% 253 20% 17% 368 24% 29% 483 21% 35% REMARK 3 24 42% 139 25% 33% 254 24% 39% 369 21% 27% 484 18% 24% REMARK 3 25 49% 82% 140 27% 26% 255 29% 48% 370 25% 27% 485 26% 29% REMARK 3 26 28% 141 26% 32% 256 30% 39% 371 28% 486 30% REMARK 3 27 22% 50% 142 24% 29% 257 23% 25% 372 26% 487 25% 29% REMARK 3 28 23% 143 20% 23% 258 30% 373 20% 32% 488 28% 33% REMARK 3 29 25% 144 22% 36% 259 30% 36% 374 23% 489 29% 43% REMARK 3 30 34% 145 18% 27% 260 25% 32% 375 27% 31% 490 32% 45% REMARK 3 31 47% 146 22% 35% 261 24% 28% 376 29% 32% 491 26% 38% REMARK 3 32 69% 147 25% 40% 262 30% 377 26% 35% 492 24% 33% REMARK 3 33 73% 148 25% 44% 263 23% 36% 378 26% 33% 493 31% 50% REMARK 3 34 53% 149 20% 27% 264 27% 379 26% 494 30% 38% REMARK 3 35 51% 58% 150 22% 35% 265 23% 34% 380 31% 40% 495 27% 34% REMARK 3 36 54% 151 25% 36% 266 27% 43% 381 31% 496 28% REMARK 3 37 35% 152 25% 34% 267 27% 34% 382 26% 36% 497 25% 40% REMARK 3 38 24% 31% 153 24% 41% 268 25% 44% 383 26% 33% 498 20% 19% REMARK 3 39 27% 154 23% 32% 269 26% 38% 384 32% 40% 499 19% 34% REMARK 3 40 29% 49% 155 24% 24% 270 22% 39% 385 28% 500 18% 19% REMARK 3 41 27% 45% 156 271 19% 38% 386 29% 53% 501 21% 31% REMARK 3 42 28% 39% 157 272 20% 22% 387 27% 38% 502 20% 34% REMARK 3 43 25% 158 273 20% 34% 388 23% 32% 503 20% REMARK 3 44 19% 18% 159 274 26% 34% 389 23% 39% 504 17% 21% REMARK 3 45 23% 34% 160 25% 27% 275 27% 37% 390 27% 35% 505 20% 35% REMARK 3 46 27% 29% 161 29% 28% 276 33% 38% 391 23% 27% 506 23% 35% REMARK 3 47 30% 41% 162 27% 32% 277 37% 38% 392 22% 507 20% 26% REMARK 3 48 26% 34% 163 24% 28% 278 30% 45% 393 22% 34% 508 22% 22% REMARK 3 49 21% 34% 164 25% 35% 279 27% 30% 394 24% 33% 509 21% 25% REMARK 3 50 20% 30% 165 24% 30% 280 25% 41% 395 31% 30% 510 23% 34% REMARK 3 51 21% 28% 166 22% 25% 281 22% 32% 396 32% 23% 511 23% 25% REMARK 3 52 22% 36% 167 23% 28% 282 24% 30% 397 25% 32% 512 25% 30% REMARK 3 53 23% 30% 168 19% 30% 283 28% 38% 398 27% 38% 513 22% 27% REMARK 3 54 24% 40% 169 20% 32% 284 28% 399 28% 42% 514 28% REMARK 3 55 25% 32% 170 25% 28% 285 28% 44% 400 29% 31% 515 24% 36% REMARK 3 56 27% 29% 171 29% 286 23% 401 24% 38% 516 21% REMARK 3 57 27% 172 25% 33% 287 23% 41% 402 32% 517 21% 24% REMARK 3 58 28% 33% 173 26% 30% 288 23% 25% 403 28% 29% 518 22% 38% REMARK 3 59 23% 33% 174 22% 37% 289 23% 31% 404 31% 39% 519 19% 29% REMARK 3 60 22% 26% 175 18% 24% 290 17% 21% 405 24% 28% 520 18% 27% REMARK 3 61 17% 33% 176 18% 291 18% 31% 406 18% 30% 521 20% 42% REMARK 3 62 20% 31% 177 22% 40% 292 14% 24% 407 19% 522 21% 28% REMARK 3 63 28% 178 25% 30% 293 18% 24% 408 21% 32% 523 19% 28% REMARK 3 64 32% 43% 179 34% 49% 294 21% 39% 409 24% 28% 524 21% 30% REMARK 3 65 35% 43% 180 32% 35% 295 22% 29% 410 26% 27% 525 19% 22% REMARK 3 66 30% 41% 181 28% 35% 296 15% 24% 411 23% 26% 526 20% 25% REMARK 3 67 22% 34% 182 25% 39% 297 20% 31% 412 24% 527 21% 26% REMARK 3 68 20% 27% 183 23% 39% 298 24% 30% 413 25% 37% 528 22% 21% REMARK 3 69 21% 30% 184 20% 23% 299 25% 414 21% 19% 529 22% 24% REMARK 3 70 24% 30% 185 27% 41% 300 24% 415 25% 34% 530 27% 34% REMARK 3 71 24% 41% 186 27% 35% 301 23% 24% 416 26% 33% 531 33% REMARK 3 72 22% 27% 187 27% 34% 302 27% 35% 417 20% 26% 532 29% 43% REMARK 3 73 20% 27% 188 29% 303 23% 32% 418 19% 30% 533 23% 36% REMARK 3 74 22% 27% 189 29% 304 21% 419 16% 22% 534 21% 27% REMARK 3 75 19% 30% 190 21% 41% 305 20% 23% 420 18% 30% 535 18% 27% REMARK 3 76 20% 27% 191 20% 28% 306 24% 41% 421 20% 25% 536 23% 46% REMARK 3 77 19% 32% 192 23% 34% 307 21% 422 20% 30% 537 28% REMARK 3 78 22% 20% 193 23% 22% 308 21% 28% 423 21% 20% 538 27% 41% REMARK 3 79 22% 27% 194 22% 33% 309 22% 30% 424 30% 43% 539 21% 37% REMARK 3 80 28% 40% 195 24% 38% 310 22% 32% 425 31% 40% 540 19% 29% REMARK 3 81 22% 22% 196 27% 311 20% 25% 426 30% 30% 541 21% REMARK 3 82 25% 37% 197 25% 39% 312 24% 38% 427 28% 30% 542 23% 29% REMARK 3 83 21% 28% 198 21% 30% 313 22% 35% 428 34% 33% 543 21% 26% REMARK 3 84 26% 39% 199 22% 23% 314 20% 27% 429 38% 51% 544 20% 28% REMARK 3 85 22% 29% 200 18% 23% 315 22% 430 34% 44% 545 20% 23% REMARK 3 86 22% 36% 201 20% 38% 316 22% 32% 431 28% 39% 546 23% 28% REMARK 3 87 26% 35% 202 17% 19% 317 23% 31% 432 25% 27% 547 25% 26% REMARK 3 88 23% 20% 203 19% 23% 318 20% 29% 433 19% 21% 548 27% 43% REMARK 3 89 27% 35% 204 21% 30% 319 25% 38% 434 25% 32% 549 26% 31% REMARK 3 90 28% 42% 205 20% 23% 320 21% 435 22% 20% 550 24% 35% REMARK 3 91 31% 206 22% 27% 321 22% 29% 436 19% 26% 551 25% 41% REMARK 3 92 28% 36% 207 21% 20% 322 21% 32% 437 19% 552 24% 22% REMARK 3 93 29% 46% 208 30% 33% 323 20% 24% 438 19% 553 24% 35% REMARK 3 94 29% 209 25% 22% 324 25% 28% 439 27% 38% 554 20% 23% REMARK 3 95 21% 28% 210 20% 25% 325 22% 33% 440 27% 27% 555 21% 27% REMARK 3 96 16% 33% 211 19% 29% 326 19% 28% 441 29% 556 21% 20% REMARK 3 97 13% 212 25% 31% 327 27% 37% 442 32% 41% 557 22% 28% REMARK 3 98 20% 34% 213 28% 39% 328 25% 443 23% 28% 558 25% 39% REMARK 3 99 26% 33% 214 29% 31% 329 24% 39% 444 16% 31% 559 18% 24% REMARK 3 100 27% 29% 215 34% 50% 330 24% 30% 445 23% 32% 560 21% 28% REMARK 3 101 25% 40% 216 34% 37% 331 22% 27% 446 24% 37% 561 22% 33% REMARK 3 102 25% 34% 217 25% 27% 332 21% 35% 447 19% 23% 562 24% 35% REMARK 3 103 32% 218 23% 39% 333 19% 23% 448 20% 39% 563 24% 26% REMARK 3 104 24% 28% 219 25% 27% 334 23% 449 21% 22% 564 25% 31% REMARK 3 105 24% 36% 220 22% 24% 335 24% 37% 450 24% 37% 565 27% 36% REMARK 3 106 26% 36% 221 34% 46% 336 24% 32% 451 26% 30% 566 28% 41% REMARK 3 107 29% 37% 222 31% 30% 337 25% 452 20% 567 29% REMARK 3 108 25% 29% 223 27% 36% 338 25% 20% 453 19% 18% 568 30% REMARK 3 109 28% 24% 224 27% 339 27% 38% 454 20% 29% 569 24% 27% REMARK 3 110 27% 36% 225 28% 39% 340 27% 455 22% 34% 570 22% 25% REMARK 3 111 29% 38% 226 21% 29% 341 26% 25% 456 21% 571 23% 39% REMARK 3 112 19% 22% 227 23% 342 24% 35% 457 20% 25% 572 18% 28% REMARK 3 113 18% 26% 228 20% 32% 343 21% 30% 458 20% 35% 573 22% 27% REMARK 3 114 18% 229 24% 33% 344 27% 36% 459 17% 25% 574 20% 28% REMARK 3 115 24% 29% 230 21% 22% 345 27% 30% 460 22% 36% 575 25% 31% REMARK 3 116 25% 231 26% 40% 346 31% 32% 461 22% 28% 576 28% 28% REMARK 3 117 24% 24% 232 25% 32% 347 31% 462 18% 24% 577 28% 49% REMARK 3 118 29% 233 16% 23% 348 23% 23% 463 21% 35% 578 24% 43% REMARK 3 119 27% 39% 234 19% 33% 349 30% 49% 464 22% 30% 579 31% REMARK 3 120 23% 29% 235 20% 350 32% 51% 465 28% 30% 580 29% 29% REMARK 3 121 27% 33% 236 24% 34% 351 29% 466 20% 33% 581 24% 41% REMARK 3 122 25% 25% 237 31% 26% 352 25% 24% 467 25% 582 21% 33% REMARK 3 123 25% 30% 238 28% 29% 353 27% 36% 468 28% 40% 583 24% 39% REMARK 3 124 22% 239 26% 22% 354 25% 35% 469 25% 29% 584 23% 28% REMARK 4 REMARK 4 4DPV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY NDB. REMARK 100 THE DEPOSITION ID IS D_1000179303. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JAN-87 REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : FILM REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : PURDUE DATA PROCESSING PACKAGE REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 565088 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.900 REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 43.0 REMARK 200 DATA REDUNDANCY : 1.660 REMARK 200 R MERGE (I) : 0.12200 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 174.50500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 THE ASSEMBLY REPRESENTED IN THIS ENTRY HAS REGULAR REMARK 300 ICOSAHEDRAL POINT SYMMETRY (SCHOENFLIES SYMBOL = I). REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 APPLY THE FOLLOWING TO CHAINS: N, Z REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.420685 0.857252 -0.296873 -57.82013 REMARK 350 BIOMT2 2 -0.882281 0.310420 -0.353871 -81.56334 REMARK 350 BIOMT3 2 -0.211202 0.410798 0.886929 -21.39948 REMARK 350 BIOMT1 3 -0.516661 0.504787 -0.691552 -145.71159 REMARK 350 BIOMT2 3 -0.570302 -0.805346 -0.161782 -48.29596 REMARK 350 BIOMT3 3 -0.638609 0.310815 0.703974 -61.67362 REMARK 350 BIOMT1 4 -0.516658 -0.570301 -0.638604 -142.21138 REMARK 350 BIOMT2 4 0.504793 -0.805348 0.310807 53.82775 REMARK 350 BIOMT3 4 -0.691560 -0.161775 0.703972 -65.16492 REMARK 350 BIOMT1 5 0.420690 -0.882276 -0.211202 -52.15666 REMARK 350 BIOMT2 5 0.857259 0.310418 0.410794 83.67629 REMARK 350 BIOMT3 5 -0.296878 -0.353870 0.886926 -27.04852 REMARK 350 BIOMT1 6 0.355683 -0.056569 -0.932892 -104.14861 REMARK 350 BIOMT2 6 -0.056562 -0.997640 0.038922 -1.15642 REMARK 350 BIOMT3 6 -0.932895 0.038927 -0.358043 -151.27912 REMARK 350 BIOMT1 7 0.396568 -0.095880 -0.912983 -100.13689 REMARK 350 BIOMT2 7 0.848184 -0.342186 0.404349 82.65191 REMARK 350 BIOMT3 7 -0.351180 -0.934726 -0.054382 -92.85208 REMARK 350 BIOMT1 8 0.444247 -0.064856 -0.893552 -95.70884 REMARK 350 BIOMT2 8 0.573323 0.786991 0.227916 52.86678 REMARK 350 BIOMT3 8 0.688440 -0.613548 0.386795 4.85631 REMARK 350 BIOMT1 9 0.432829 -0.006370 -0.901452 -96.98388 REMARK 350 BIOMT2 9 -0.501296 0.829408 -0.246553 -49.34977 REMARK 350 BIOMT3 9 0.749246 0.558604 0.355798 6.81638 REMARK 350 BIOMT1 10 0.378093 -0.001248 -0.925765 -102.19994 REMARK 350 BIOMT2 10 -0.890586 -0.273555 -0.363357 -82.73794 REMARK 350 BIOMT3 10 -0.252794 0.961856 -0.104538 -89.68062 REMARK 350 BIOMT1 11 -0.355934 0.034152 0.933885 -27.66827 REMARK 350 BIOMT2 11 0.034151 -0.998189 0.049518 5.52497 REMARK 350 BIOMT3 11 0.933888 0.049520 0.354123 18.87972 REMARK 350 BIOMT1 12 -0.377106 0.089114 0.921872 -29.85832 REMARK 350 BIOMT2 12 0.884592 -0.260240 0.387011 83.90633 REMARK 350 BIOMT3 12 0.274390 0.961423 0.019312 -46.73493 REMARK 350 BIOMT1 13 -0.431967 0.083090 0.898052 -35.04999 REMARK 350 BIOMT2 13 0.520002 0.836518 0.172732 45.70333 REMARK 350 BIOMT3 13 -0.736892 0.541600 -0.404550 -141.43035 REMARK 350 BIOMT1 14 -0.444701 0.024406 0.895345 -36.06856 REMARK 350 BIOMT2 14 -0.555768 0.776402 -0.297193 -56.28880 REMARK 350 BIOMT3 14 -0.702401 -0.629767 -0.331701 -134.34069 REMARK 350 BIOMT1 15 -0.397710 -0.005840 0.917491 -31.50640 REMARK 350 BIOMT2 15 -0.856041 -0.357509 -0.373344 -81.12039 REMARK 350 BIOMT3 15 0.330198 -0.933889 0.137185 -35.26362 REMARK 350 BIOMT1 16 -0.999748 0.022417 -0.000993 -131.91501 REMARK 350 BIOMT2 16 0.022411 0.995829 -0.088440 -4.36855 REMARK 350 BIOMT3 16 -0.000993 -0.088447 -0.996081 -132.01220 REMARK 350 BIOMT1 17 -0.440147 -0.850486 0.287985 -75.91654 REMARK 350 BIOMT2 17 -0.850495 0.292006 -0.437489 -84.99490 REMARK 350 BIOMT3 17 0.287992 -0.437495 -0.851859 -103.42511 REMARK 350 BIOMT1 18 0.504382 -0.523021 0.687052 12.73855 REMARK 350 BIOMT2 18 -0.523023 -0.818163 -0.238865 -50.27414 REMARK 350 BIOMT3 18 0.687061 -0.238867 -0.686219 -66.16394 REMARK 350 BIOMT1 19 0.528531 0.552265 0.644711 11.53194 REMARK 350 BIOMT2 19 0.552271 -0.800462 0.232940 51.81082 REMARK 350 BIOMT3 19 0.644715 0.232939 -0.728069 -71.72237 REMARK 350 BIOMT1 20 -0.401073 0.889364 0.219476 -77.86887 REMARK 350 BIOMT2 20 0.889367 0.320647 0.325907 80.18204 REMARK 350 BIOMT3 20 0.219474 0.325903 -0.919574 -112.41884 REMARK 350 BIOMT1 21 -0.470083 0.542497 -0.696212 -142.94857 REMARK 350 BIOMT2 21 -0.802626 0.065411 0.592893 -13.72757 REMARK 350 BIOMT3 21 0.367183 0.837506 0.404672 -15.14343 REMARK 350 BIOMT1 22 -0.529351 -0.520580 -0.669910 -145.11762 REMARK 350 BIOMT2 22 -0.520583 -0.424189 0.740985 14.65763 REMARK 350 BIOMT3 22 -0.669915 0.740985 -0.046461 -113.34356 REMARK 350 BIOMT1 23 0.378094 -0.890583 -0.252794 -57.71454 REMARK 350 BIOMT2 23 -0.001245 -0.273553 0.961856 63.49938 REMARK 350 BIOMT3 23 -0.925768 -0.363355 -0.104541 -134.05200 REMARK 350 BIOMT1 24 0.998194 -0.056180 -0.021305 -1.52742 REMARK 350 BIOMT2 24 0.037681 0.309144 0.950270 65.30005 REMARK 350 BIOMT3 24 -0.046796 -0.949354 0.310696 -48.65039 REMARK 350 BIOMT1 25 0.473991 0.829512 -0.295352 -54.20494 REMARK 350 BIOMT2 25 -0.457599 0.518636 0.722238 17.57117 REMARK 350 BIOMT3 25 0.752292 -0.207181 0.625407 24.83915 REMARK 350 BIOMT1 26 0.451608 -0.541726 0.708925 10.70490 REMARK 350 BIOMT2 26 -0.842287 0.003227 0.539028 -19.90315 REMARK 350 BIOMT3 26 -0.294287 -0.840548 -0.454834 -115.57199 REMARK 350 BIOMT1 27 0.518213 0.510204 0.686398 13.60724 REMARK 350 BIOMT2 27 -0.471028 -0.499619 0.726990 16.99988 REMARK 350 BIOMT3 27 0.713859 -0.700046 -0.018594 -20.26517 REMARK 350 BIOMT1 28 -0.377107 0.884587 0.274396 -72.65840 REMARK 350 BIOMT2 28 0.089109 -0.260235 0.961424 69.42814 REMARK 350 BIOMT3 28 0.921874 0.387011 0.019309 -4.04463 REMARK 350 BIOMT1 29 -0.997051 0.064039 0.042293 -128.87585 REMARK 350 BIOMT2 29 0.064033 0.390557 0.918351 64.92756 REMARK 350 BIOMT3 29 0.042288 0.918346 -0.393506 -89.32659 REMARK 350 BIOMT1 30 -0.484877 -0.817471 0.310846 -77.35450 REMARK 350 BIOMT2 30 -0.511601 0.553386 0.657296 9.71778 REMARK 350 BIOMT3 30 -0.709341 0.159674 -0.686543 -158.25429 REMARK 350 BIOMT1 31 -0.464339 -0.592046 -0.658685 -140.08919 REMARK 350 BIOMT2 31 0.841612 -0.063344 -0.536364 20.03474 REMARK 350 BIOMT3 31 0.275827 -0.803410 0.527682 -13.03546 REMARK 350 BIOMT1 32 0.466126 -0.852425 -0.236849 -50.85631 REMARK 350 BIOMT2 32 0.523221 0.481473 -0.703153 -11.98292 REMARK 350 BIOMT3 32 0.713422 0.203830 0.670435 25.25284 REMARK 350 BIOMT1 33 0.998193 0.037681 -0.046800 -3.21274 REMARK 350 BIOMT2 33 -0.056176 0.309138 -0.949356 -66.45908 REMARK 350 BIOMT3 33 -0.021306 0.950269 0.310703 -46.96931 REMARK 350 BIOMT1 34 0.396564 0.848175 -0.351179 -63.00028 REMARK 350 BIOMT2 34 -0.095873 -0.342188 -0.934730 -68.10953 REMARK 350 BIOMT3 34 -0.912988 0.404354 -0.054376 -129.89334 REMARK 350 BIOMT1 35 -0.507330 0.458982 -0.729345 -147.59458 REMARK 350 BIOMT2 35 0.458990 -0.572394 -0.679486 -14.65341 REMARK 350 BIOMT3 35 -0.729350 -0.679479 0.079725 -108.92107 REMARK 350 BIOMT1 36 0.482814 0.591275 0.645972 8.60098 REMARK 350 BIOMT2 36 0.803301 -0.005294 -0.595557 13.59598 REMARK 350 BIOMT3 36 -0.348723 0.806452 -0.477520 -120.66073 REMARK 350 BIOMT1 37 -0.454989 0.862800 0.220361 -81.36520 REMARK 350 BIOMT2 37 0.468390 0.442335 -0.764821 -19.67458 REMARK 350 BIOMT3 37 -0.757367 -0.244769 -0.605380 -156.05570 REMARK 350 BIOMT1 38 -0.999180 -0.031685 0.025198 -130.14620 REMARK 350 BIOMT2 38 -0.031687 0.224651 -0.973924 -66.46845 REMARK 350 BIOMT3 38 0.025200 -0.973924 -0.225471 -79.34566 REMARK 350 BIOMT1 39 -0.397706 -0.856034 0.330191 -70.32834 REMARK 350 BIOMT2 39 -0.005841 -0.357514 -0.933892 -62.11808 REMARK 350 BIOMT3 39 0.917496 -0.373346 0.137186 3.45872 REMARK 350 BIOMT1 40 0.518216 -0.471023 0.713850 15.42214 REMARK 350 BIOMT2 40 0.510210 -0.499627 -0.700048 -12.63554 REMARK 350 BIOMT3 40 0.686399 0.726987 -0.018589 -22.07539 REMARK 350 BIOMT1 41 -0.470081 -0.802615 0.367182 -72.65500 REMARK 350 BIOMT2 41 0.542500 0.065408 0.837506 91.13026 REMARK 350 BIOMT3 41 -0.696222 0.592893 0.404674 -85.25676 REMARK 350 BIOMT1 42 0.432827 -0.501288 0.749242 12.13163 REMARK 350 BIOMT2 42 -0.006369 0.829409 0.558609 36.50576 REMARK 350 BIOMT3 42 -0.901456 -0.246552 0.355798 -102.01928 REMARK 350 BIOMT1 43 0.466120 0.523218 0.713421 11.95890 REMARK 350 BIOMT2 43 -0.852431 0.481481 0.203833 -42.72930 REMARK 350 BIOMT3 43 -0.236846 -0.703149 0.670434 -37.40123 REMARK 350 BIOMT1 44 -0.416212 0.855071 0.309224 -72.93448 REMARK 350 BIOMT2 44 -0.826456 -0.497552 0.263467 -37.07476 REMARK 350 BIOMT3 44 0.379141 -0.145895 0.913764 19.29746 REMARK 350 BIOMT1 45 -0.994816 0.035661 0.095236 -125.22874 REMARK 350 BIOMT2 45 0.035659 -0.754700 0.655099 45.65501 REMARK 350 BIOMT3 45 0.095231 0.655103 0.749516 -10.27889 REMARK 350 BIOMT1 46 -0.464345 0.841606 0.275829 -78.31557 REMARK 350 BIOMT2 46 -0.592047 -0.063340 -0.803411 -92.14327 REMARK 350 BIOMT3 46 -0.658687 -0.536357 0.527685 -74.65055 REMARK 350 BIOMT1 47 -0.996132 -0.023500 0.084672 -126.01386 REMARK 350 BIOMT2 47 -0.023500 -0.857235 -0.514392 -35.55219 REMARK 350 BIOMT3 47 0.084670 -0.514385 0.853367 -4.11034 REMARK 350 BIOMT1 48 -0.416207 -0.826448 0.379138 -68.31260 REMARK 350 BIOMT2 48 0.855077 -0.497559 -0.145902 46.73326 REMARK 350 BIOMT3 48 0.309219 0.263469 0.913766 14.68738 REMARK 350 BIOMT1 49 0.473993 -0.457591 0.752286 15.04704 REMARK 350 BIOMT2 49 0.829520 0.518628 -0.207182 40.99738 REMARK 350 BIOMT3 49 -0.295359 0.722237 0.625413 -44.23521 REMARK 350 BIOMT1 50 0.444242 0.573323 0.688437 8.86486 REMARK 350 BIOMT2 50 -0.064852 0.786990 -0.613545 -44.83303 REMARK 350 BIOMT3 50 -0.893558 0.227918 0.386802 -99.44909 REMARK 350 BIOMT1 51 0.482816 0.803290 -0.348718 -57.15078 REMARK 350 BIOMT2 51 0.591277 -0.005288 0.806453 92.29348 REMARK 350 BIOMT3 51 0.645977 -0.595557 -0.477528 -55.07767 REMARK 350 BIOMT1 52 -0.431965 0.520000 -0.736884 -143.12391 REMARK 350 BIOMT2 52 0.083082 0.836520 0.541603 41.27942 REMARK 350 BIOMT3 52 0.898057 0.172725 -0.404555 -33.63365 REMARK 350 BIOMT1 53 -0.484876 -0.511595 -0.709338 -144.79159 REMARK 350 BIOMT2 53 -0.817482 0.553385 0.159678 -43.34385 REMARK 350 BIOMT3 53 0.310850 0.657288 -0.686543 -90.99015 REMARK 350 BIOMT1 54 0.397204 -0.865864 -0.304148 -59.84914 REMARK 350 BIOMT2 54 -0.865868 -0.463411 0.188485 -44.62985 REMARK 350 BIOMT3 54 -0.304144 0.188482 -0.933793 -147.88243 REMARK 350 BIOMT1 55 0.995270 -0.053221 -0.081272 -5.68415 REMARK 350 BIOMT2 55 0.004793 -0.808690 0.588213 39.19863 REMARK 350 BIOMT3 55 -0.097024 -0.585819 -0.804614 -125.68729 REMARK 350 BIOMT1 56 0.451611 -0.842281 -0.294293 -55.61053 REMARK 350 BIOMT2 56 -0.541730 0.003221 -0.840547 -91.28048 REMARK 350 BIOMT3 56 0.708932 0.539021 -0.454832 -49.42662 REMARK 350 BIOMT1 57 0.995270 0.004789 -0.097029 -6.72574 REMARK 350 BIOMT2 57 -0.053214 -0.808694 -0.585821 -42.23299 REMARK 350 BIOMT3 57 -0.081270 0.588212 -0.804610 -124.64833 REMARK 350 BIOMT1 58 0.434963 0.814825 -0.383221 -62.58660 REMARK 350 BIOMT2 58 0.814836 -0.537306 -0.217610 39.33989 REMARK 350 BIOMT3 58 -0.383223 -0.217608 -0.897657 -150.70761 REMARK 350 BIOMT1 59 -0.454985 0.468384 -0.757362 -145.99530 REMARK 350 BIOMT2 59 0.862804 0.442335 -0.244770 40.70722 REMARK 350 BIOMT3 59 0.220362 -0.764823 -0.605384 -91.59142 REMARK 350 BIOMT1 60 -0.444696 -0.555763 -0.702401 -141.68385 REMARK 350 BIOMT2 60 0.024400 0.776399 -0.629767 -40.02061 REMARK 350 BIOMT3 60 0.895351 -0.297201 -0.331703 -28.99633 REMARK 400 REMARK 400 COMPOUND REMARK 400 VP3 IS A PROTEOLYTIC CLEAVAGE PRODUCT, MISSING THE 15 - 20 REMARK 400 N-TERMINAL RESIDUES OF VP2. UP TO 20 PERCENT OF THE 60 REMARK 400 COPIES OF VP2 IN EACH CAPSID ARE REPLACED BY VP1, THE REMARK 400 PRODUCT OF ALTERATE TRANSCRIPTIONAL SPLICING, CONTAINING AN REMARK 400 ADDITIONAL 153 N-TERMINAL AMINO ACIDS. NO EVIDENCE IS SEEN REMARK 400 FOR THIS EXTENSION IN THE SIXTY-FOLD AVERAGED ELECTRON REMARK 400 DENSITY MAP. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET Z 1 REMARK 465 SER Z 2 REMARK 465 ASP Z 3 REMARK 465 GLY Z 4 REMARK 465 ALA Z 5 REMARK 465 VAL Z 6 REMARK 465 GLN Z 7 REMARK 465 PRO Z 8 REMARK 465 ASP Z 9 REMARK 465 GLY Z 10 REMARK 465 GLY Z 11 REMARK 465 GLN Z 12 REMARK 465 PRO Z 13 REMARK 465 ALA Z 14 REMARK 465 VAL Z 15 REMARK 465 ARG Z 16 REMARK 465 ASN Z 17 REMARK 465 GLU Z 18 REMARK 465 ARG Z 19 REMARK 465 ALA Z 20 REMARK 465 THR Z 21 REMARK 465 SER Z 156 REMARK 465 ALA Z 157 REMARK 465 THR Z 158 REMARK 465 GLN Z 159 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 DA N 1 N9 C8 N7 C5 C6 N6 C2 REMARK 470 DA N 1 N3 C4 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DA N 1 P DA N 1 O5' 0.067 REMARK 500 DT N 9 C1' DT N 9 N1 0.084 REMARK 500 DG N 10 O3' DG N 10 C3' 0.083 REMARK 500 DC N 11 P DC N 11 O5' 0.069 REMARK 500 DC N 11 C1' DC N 11 N1 0.114 REMARK 500 GLU Z 50 CD GLU Z 50 OE2 0.075 REMARK 500 GLU Z 55 CD GLU Z 55 OE1 0.087 REMARK 500 GLU Z 60 CD GLU Z 60 OE2 0.072 REMARK 500 GLU Z 75 CD GLU Z 75 OE2 0.124 REMARK 500 GLU Z 77 CD GLU Z 77 OE2 0.076 REMARK 500 GLU Z 135 CD GLU Z 135 OE2 0.066 REMARK 500 GLU Z 142 CD GLU Z 142 OE1 0.081 REMARK 500 GLU Z 144 CD GLU Z 144 OE2 0.086 REMARK 500 GLU Z 155 CD GLU Z 155 OE2 0.078 REMARK 500 GLU Z 193 CD GLU Z 193 OE2 0.074 REMARK 500 GLU Z 260 CD GLU Z 260 OE2 0.077 REMARK 500 GLU Z 368 CD GLU Z 368 OE2 0.075 REMARK 500 GLU Z 393 CD GLU Z 393 OE2 0.085 REMARK 500 GLU Z 396 CD GLU Z 396 OE2 0.069 REMARK 500 GLU Z 411 CD GLU Z 411 OE2 0.072 REMARK 500 GLU Z 509 CD GLU Z 509 OE2 0.096 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DA N 1 C3' - O3' - P ANGL. DEV. = 8.4 DEGREES REMARK 500 DA N 3 P - O5' - C5' ANGL. DEV. = -13.5 DEGREES REMARK 500 DA N 3 N9 - C1' - C2' ANGL. DEV. = 8.4 DEGREES REMARK 500 DA N 3 O4' - C1' - N9 ANGL. DEV. = 5.3 DEGREES REMARK 500 DA N 3 C2 - N3 - C4 ANGL. DEV. = -3.2 DEGREES REMARK 500 DA N 3 C5 - C6 - N1 ANGL. DEV. = -3.0 DEGREES REMARK 500 DC N 7 O4' - C1' - N1 ANGL. DEV. = 4.5 DEGREES REMARK 500 DT N 8 C3' - O3' - P ANGL. DEV. = 8.6 DEGREES REMARK 500 DT N 9 O4' - C1' - N1 ANGL. DEV. = 5.5 DEGREES REMARK 500 DG N 10 O4' - C1' - N9 ANGL. DEV. = 4.6 DEGREES REMARK 500 DG N 10 C3' - O3' - P ANGL. DEV. = 8.3 DEGREES REMARK 500 DC N 11 O4' - C1' - N1 ANGL. DEV. = 2.9 DEGREES REMARK 500 ASN Z 25 C - N - CA ANGL. DEV. = 16.2 DEGREES REMARK 500 ASN Z 25 CA - CB - CG ANGL. DEV. = 15.8 DEGREES REMARK 500 THR Z 44 CA - CB - CG2 ANGL. DEV. = -8.6 DEGREES REMARK 500 ASP Z 99 CB - CG - OD2 ANGL. DEV. = -6.0 DEGREES REMARK 500 ASP Z 113 CB - CG - OD2 ANGL. DEV. = -6.1 DEGREES REMARK 500 MET Z 133 CA - CB - CG ANGL. DEV. = -15.5 DEGREES REMARK 500 ASP Z 168 CB - CG - OD1 ANGL. DEV. = 7.1 DEGREES REMARK 500 PRO Z 202 C - N - CD ANGL. DEV. = -12.8 DEGREES REMARK 500 THR Z 203 CA - CB - CG2 ANGL. DEV. = -11.8 DEGREES REMARK 500 PRO Z 205 C - N - CA ANGL. DEV. = 9.2 DEGREES REMARK 500 PRO Z 205 C - N - CD ANGL. DEV. = -12.7 DEGREES REMARK 500 PRO Z 238 C - N - CD ANGL. DEV. = -13.4 DEGREES REMARK 500 ASP Z 240 CB - CG - OD1 ANGL. DEV. = -9.1 DEGREES REMARK 500 ASP Z 240 CB - CG - OD2 ANGL. DEV. = 10.7 DEGREES REMARK 500 PRO Z 251 C - N - CD ANGL. DEV. = -26.4 DEGREES REMARK 500 ASP Z 259 CB - CG - OD2 ANGL. DEV. = -6.5 DEGREES REMARK 500 ASP Z 269 CB - CG - OD1 ANGL. DEV. = 5.6 DEGREES REMARK 500 ASP Z 269 CB - CG - OD2 ANGL. DEV. = -6.3 DEGREES REMARK 500 ASP Z 305 CB - CG - OD1 ANGL. DEV. = -5.5 DEGREES REMARK 500 ASP Z 311 CB - CG - OD1 ANGL. DEV. = -6.0 DEGREES REMARK 500 ASN Z 321 CB - CA - C ANGL. DEV. = -13.0 DEGREES REMARK 500 ARG Z 332 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 ASP Z 367 CB - CG - OD1 ANGL. DEV. = 5.5 DEGREES REMARK 500 ASP Z 367 CB - CG - OD2 ANGL. DEV. = -5.6 DEGREES REMARK 500 ASP Z 373 CB - CG - OD2 ANGL. DEV. = -5.8 DEGREES REMARK 500 ASP Z 405 CB - CG - OD1 ANGL. DEV. = 7.5 DEGREES REMARK 500 PRO Z 410 C - N - CD ANGL. DEV. = -14.0 DEGREES REMARK 500 ASP Z 427 CB - CG - OD2 ANGL. DEV. = -6.0 DEGREES REMARK 500 ASP Z 434 CB - CG - OD2 ANGL. DEV. = -7.8 DEGREES REMARK 500 ASP Z 471 CB - CG - OD1 ANGL. DEV. = 6.8 DEGREES REMARK 500 ASP Z 471 CB - CG - OD2 ANGL. DEV. = -6.2 DEGREES REMARK 500 ASP Z 477 CB - CG - OD2 ANGL. DEV. = -5.5 DEGREES REMARK 500 ARG Z 481 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 ASP Z 513 CB - CG - OD2 ANGL. DEV. = -6.5 DEGREES REMARK 500 ARG Z 520 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN Z 25 -23.12 112.58 REMARK 500 GLU Z 77 43.06 -82.75 REMARK 500 ASN Z 86 33.65 -96.49 REMARK 500 ASN Z 93 98.58 91.83 REMARK 500 ASN Z 95 42.09 -106.64 REMARK 500 HIS Z 102 165.48 177.22 REMARK 500 ALA Z 116 131.43 -173.62 REMARK 500 PRO Z 161 74.14 -65.13 REMARK 500 LEU Z 218 109.86 -166.75 REMARK 500 TRP Z 279 -19.51 -141.02 REMARK 500 GLU Z 298 -177.62 -66.72 REMARK 500 ALA Z 300 35.15 -81.70 REMARK 500 ILE Z 330 145.34 -37.75 REMARK 500 ALA Z 334 -148.38 -166.00 REMARK 500 TYR Z 342 148.04 -173.40 REMARK 500 THR Z 349 -31.00 -39.13 REMARK 500 PHE Z 353 144.99 -170.28 REMARK 500 ARG Z 361 -88.50 -146.85 REMARK 500 THR Z 366 -89.40 -124.21 REMARK 500 ASP Z 367 43.98 72.24 REMARK 500 GLU Z 368 -14.02 66.85 REMARK 500 ALA Z 371 117.40 -26.23 REMARK 500 ALA Z 372 -147.18 -128.69 REMARK 500 GLU Z 393 43.05 -81.16 REMARK 500 LEU Z 457 -176.54 -171.67 REMARK 500 ASP Z 475 53.92 -93.22 REMARK 500 ASN Z 492 -135.00 -89.37 REMARK 500 LYS Z 501 147.11 178.93 REMARK 500 GLN Z 558 -32.30 -31.01 REMARK 500 ASN Z 565 2.88 -61.69 REMARK 500 SER Z 576 -50.66 -128.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASN Z 25 GLY Z 26 -141.36 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 VAL Z 241 -10.35 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG N 13 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DA N 3 OP1 REMARK 620 2 DT N 9 OP1 78.5 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG N 12 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DC N 4 OP1 REMARK 620 2 DT N 6 OP1 107.5 REMARK 620 3 DC N 7 OP2 155.0 80.3 REMARK 620 4 DT N 9 OP2 91.3 140.6 69.8 REMARK 620 5 ASN Z 180 OD1 78.7 71.5 81.6 79.1 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG Z 585 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP Z 237 OD2 REMARK 620 2 ASP Z 240 OD2 83.7 REMARK 620 3 ASP Z 240 OD1 79.0 42.3 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG Z 586 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP Z 237 OD2 REMARK 620 2 ASP Z 237 OD1 48.6 REMARK 620 3 ASP Z 239 OD2 85.6 66.5 REMARK 620 N 1 2 REMARK 700 REMARK 700 SHEET REMARK 700 THE STRUCTURE OF CANINE PARVOVIRUS FOLLOWS THE CANONICAL REMARK 700 PICORNA-VIRUS LIKE "JELLY ROLL" BARREL. THE SHEET REMARK 700 IDENTIFIED AS "BDG" IS THAT REFERRED TO AS "BIDG" IN THE REMARK 700 LITERATURE WITH STRANDS 1 TO 5 CORRESPONDING TO STRANDS A, REMARK 700 B, I, D, AND G. THE SHEET IDENTIFIED AS "CHF" IS THE REMARK 700 SO-CALLED CHEF SHEET WITH STRANDS 1 TO 4 CORRESPONDING TO REMARK 700 STRANDS C, H, E, AND F. THESE TWO SHEETS ARE LOOSELY REMARK 700 CONNECTED TOGETHER BY HYDROGEN BONDS BETWEEN STRAND 4 OF REMARK 700 "CHF" AND RESIDUE 45 IMMEDIATELY PRECEDING STRAND 1 OF REMARK 700 "BDG" OF A FIVE-FOLD RELATED PROTOMER THAT IS REMARK 700 GENERATED USING THE SYMMETRY OPERATORS LISTED BELOW. CPV REMARK 700 CONTAINS SEVERAL LONG LOOPS BETWEEN STRANDS OF "BDG" AND REMARK 700 "CHF" WITH LITTLE ORGANIZED SECONDARY STRUCTURE. THERE ARE REMARK 700 STRANDS WITHIN THE LOOPS THAT ARE LOOSELY HYDROGEN-BONDED REMARK 700 TOGETHER. WITH FEWER HYDROGEN BONDS AND LESS REGULAR REMARK 700 SECONDARY STRUCTURE THEY MUST BE REGARDED MORE TENTATIVELY. REMARK 700 THIS IS WHY THE SHEET "LP2" HAS BEEN IDENTIFIED SEPARATELY, REMARK 700 ALTHOUGH IT COULD BE CONSIDERED TO BE AN EXTENSION OF SHEET REMARK 700 "CHF", EXTENDING FROM STRAND 1. STRAND 1 OF "LP2" HAS A REMARK 700 BULGE AND A CHANGE OF DIRECTION AT RESIDUE 107, AFTER WHICH REMARK 700 IT BECOMES STRAND 1 OF "CHF". THE MIDDLE STRAND OF "LP2" REMARK 700 CONTAINS TWO SEGMENTS THAT RUN IN THE SAME GENERAL REMARK 700 DIRECTION, BUT ARE SEPARATED BY NON-BETA STRUCTURE. THE REMARK 700 FIRST SEGMENT (206 - 211) HYDROGEN BONDS ON ONE SIDE ONLY, REMARK 700 TO RESIDUES 103 - 111, AND THE SECOND SEGMENT (215 - 218) REMARK 700 HYDROGEN BONDS ON THE OPPOSITE SIDE TO RESIDUES 230 - 235. REMARK 700 IN ORDER TO REPRESENT THE BIFURCATED SHEET STRUCTURE IN THE REMARK 700 *SHEET* RECORDS BELOW, TWO SHEETS, *BDG* AND *CDG* ARE REMARK 700 DEFINED. STRANDS 1 - 4 OF THESE SHEETS ARE IDENTICAL. REMARK 700 THE CHAIN DESIGNATORS IN THE SECONDARY STRUCTURE LIST REFER REMARK 700 TO THE NON-CRYSTALLOGRAPHIC ICOSAHEDRAL SYMMETRY OPERATORS REMARK 700 LABELED "A" TO "H" IN *REMARK 8*, AND ARE USED WHEN A SHEET REMARK 700 SPANS TWO SUBUNITS. REMARK 700 PDB FORMAT DOES NOT ALLOW STRANDS FROM ANOTHER ASYMMETRIC REMARK 700 UNIT TO BE PRESENTED ON SHEET RECORDS. THE FOLLOWING REMARK 700 STRANDS COME FROM OTHER ASYMMETRIC UNITS: REMARK 700 CHF 6 GLY A 43 PHE A 45 -1 O GLY A 43 N LEU Z 254 REMARK 700 GH1 4 TRP F 414 ASN F 417 -1 N TRP F 414 O PHE Z 345 REMARK 700 GH1 4 ASN F 428 LEU F 430 -1 N LEU F 430 O ILE F 415 REMARK 700 GH2 3 GLY F 315 THR F 317 -1 N THR F 317 O ARG Z 377 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG N 12 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG N 13 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG Z 585 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG Z 586 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2CAS RELATED DB: PDB REMARK 900 EMPTY CANINE PARVOVIRUS (NO DNA) REMARK 900 RELATED ID: 1FPV RELATED DB: PDB REMARK 900 FELINE PANLEUKOPENIA VIRUS DBREF 4DPV Z 1 584 UNP P17455 COAT_PAVCD 154 737 DBREF 4DPV N 1 11 PDB 4DPV 4DPV 1 11 SEQRES 1 N 11 DA DT DA DC DC DT DC DT DT DG DC SEQRES 1 Z 584 MET SER ASP GLY ALA VAL GLN PRO ASP GLY GLY GLN PRO SEQRES 2 Z 584 ALA VAL ARG ASN GLU ARG ALA THR GLY SER GLY ASN GLY SEQRES 3 Z 584 SER GLY GLY GLY GLY GLY GLY GLY SER GLY GLY VAL GLY SEQRES 4 Z 584 ILE SER THR GLY THR PHE ASN ASN GLN THR GLU PHE LYS SEQRES 5 Z 584 PHE LEU GLU ASN GLY TRP VAL GLU ILE THR ALA ASN SER SEQRES 6 Z 584 SER ARG LEU VAL HIS LEU ASN MET PRO GLU SER GLU ASN SEQRES 7 Z 584 TYR ARG ARG VAL VAL VAL ASN ASN MET ASP LYS THR ALA SEQRES 8 Z 584 VAL ASN GLY ASN MET ALA LEU ASP ASP ILE HIS ALA GLN SEQRES 9 Z 584 ILE VAL THR PRO TRP SER LEU VAL ASP ALA ASN ALA TRP SEQRES 10 Z 584 GLY VAL TRP PHE ASN PRO GLY ASP TRP GLN LEU ILE VAL SEQRES 11 Z 584 ASN THR MET SER GLU LEU HIS LEU VAL SER PHE GLU GLN SEQRES 12 Z 584 GLU ILE PHE ASN VAL VAL LEU LYS THR VAL SER GLU SER SEQRES 13 Z 584 ALA THR GLN PRO PRO THR LYS VAL TYR ASN ASN ASP LEU SEQRES 14 Z 584 THR ALA SER LEU MET VAL ALA LEU ASP SER ASN ASN THR SEQRES 15 Z 584 MET PRO PHE THR PRO ALA ALA MET ARG SER GLU THR LEU SEQRES 16 Z 584 GLY PHE TYR PRO TRP LYS PRO THR ILE PRO THR PRO TRP SEQRES 17 Z 584 ARG TYR TYR PHE GLN TRP ASP ARG THR LEU ILE PRO SER SEQRES 18 Z 584 HIS THR GLY THR SER GLY THR PRO THR ASN ILE TYR HIS SEQRES 19 Z 584 GLY THR ASP PRO ASP ASP VAL GLN PHE TYR THR ILE GLU SEQRES 20 Z 584 ASN SER VAL PRO VAL HIS LEU LEU ARG THR GLY ASP GLU SEQRES 21 Z 584 PHE ALA THR GLY THR PHE PHE PHE ASP CYS LYS PRO CYS SEQRES 22 Z 584 ARG LEU THR HIS THR TRP GLN THR ASN ARG ALA LEU GLY SEQRES 23 Z 584 LEU PRO PRO PHE LEU ASN SER LEU PRO GLN SER GLU GLY SEQRES 24 Z 584 ALA THR ASN PHE GLY ASP ILE GLY VAL GLN GLN ASP LYS SEQRES 25 Z 584 ARG ARG GLY VAL THR GLN MET GLY ASN THR ASN TYR ILE SEQRES 26 Z 584 THR GLU ALA THR ILE MET ARG PRO ALA GLU VAL GLY TYR SEQRES 27 Z 584 SER ALA PRO TYR TYR SER PHE GLU ALA SER THR GLN GLY SEQRES 28 Z 584 PRO PHE LYS THR PRO ILE ALA ALA GLY ARG GLY GLY ALA SEQRES 29 Z 584 GLN THR ASP GLU ASN GLN ALA ALA ASP GLY ASN PRO ARG SEQRES 30 Z 584 TYR ALA PHE GLY ARG GLN HIS GLY GLN LYS THR THR THR SEQRES 31 Z 584 THR GLY GLU THR PRO GLU ARG PHE THR TYR ILE ALA HIS SEQRES 32 Z 584 GLN ASP THR GLY ARG TYR PRO GLU GLY ASP TRP ILE GLN SEQRES 33 Z 584 ASN ILE ASN PHE ASN LEU PRO VAL THR ASN ASP ASN VAL SEQRES 34 Z 584 LEU LEU PRO THR ASP PRO ILE GLY GLY LYS THR GLY ILE SEQRES 35 Z 584 ASN TYR THR ASN ILE PHE ASN THR TYR GLY PRO LEU THR SEQRES 36 Z 584 ALA LEU ASN ASN VAL PRO PRO VAL TYR PRO ASN GLY GLN SEQRES 37 Z 584 ILE TRP ASP LYS GLU PHE ASP THR ASP LEU LYS PRO ARG SEQRES 38 Z 584 LEU HIS VAL ASN ALA PRO PHE VAL CYS GLN ASN ASN CYS SEQRES 39 Z 584 PRO GLY GLN LEU PHE VAL LYS VAL ALA PRO ASN LEU THR SEQRES 40 Z 584 ASN GLU TYR ASP PRO ASP ALA SER ALA ASN MET SER ARG SEQRES 41 Z 584 ILE VAL THR TYR SER ASP PHE TRP TRP LYS GLY LYS LEU SEQRES 42 Z 584 VAL PHE LYS ALA LYS LEU ARG ALA SER HIS THR TRP ASN SEQRES 43 Z 584 PRO ILE GLN GLN MET SER ILE ASN VAL ASP ASN GLN PHE SEQRES 44 Z 584 ASN TYR VAL PRO SER ASN ILE GLY GLY MET LYS ILE VAL SEQRES 45 Z 584 TYR GLU LYS SER GLN LEU ALA PRO ARG LYS LEU TYR HET MG N 12 1 HET MG N 13 1 HET MG Z 585 1 HET MG Z 586 1 HETNAM MG MAGNESIUM ION FORMUL 3 MG 4(MG 2+) HELIX 1 BC2 ASN Z 86 THR Z 90 1 5 HELIX 2 CD1 ALA Z 116 PHE Z 121 1 6 HELIX 3 CD2 ASN Z 122 MET Z 133 1 12 HELIX 4 EF1 PRO Z 187 SER Z 192 5 6 HELIX 5 EF6 THR Z 245 VAL Z 250 1 6 HELIX 6 GH5 GLY Z 381 GLY Z 385 5 5 HELIX 7 GH7 TYR Z 409 ASP Z 413 5 5 HELIX 8 G10 ASN Z 443 ILE Z 447 5 5 HELIX 9 I2 ASN Z 557 VAL Z 562 5 6 SHEET 1 BDG 5 GLN Z 48 LEU Z 54 0 SHEET 2 BDG 5 GLY Z 57 MET Z 73 -1 N GLU Z 60 O LYS Z 52 SHEET 3 BDG 5 VAL Z 522 ARG Z 540 -1 N SER Z 525 O LEU Z 71 SHEET 4 BDG 5 THR Z 132 LEU Z 150 -1 O GLU Z 144 N LYS Z 530 SHEET 5 BDG 5 PHE Z 261 PHE Z 268 -1 N PHE Z 261 O ILE Z 145 SHEET 1 BID 5 GLN Z 48 LEU Z 54 0 SHEET 2 BID 5 GLY Z 57 MET Z 73 -1 N GLU Z 60 O LYS Z 52 SHEET 3 BID 5 VAL Z 522 ARG Z 540 -1 N SER Z 525 O LEU Z 71 SHEET 4 BID 5 THR Z 132 LEU Z 150 -1 O GLU Z 144 N LYS Z 530 SHEET 5 BID 5 CYS Z 273 LEU Z 275 -1 N CYS Z 273 O LEU Z 136 SHEET 1 BIG 5 GLN Z 48 LEU Z 54 0 SHEET 2 BIG 5 GLY Z 57 MET Z 73 -1 N GLU Z 60 O LYS Z 52 SHEET 3 BIG 5 VAL Z 522 ARG Z 540 -1 N SER Z 525 O LEU Z 71 SHEET 4 BIG 5 THR Z 132 SER Z 154 -1 O GLU Z 144 N LYS Z 530 SHEET 5 BIG 5 VAL Z 164 ASP Z 168 -1 N VAL Z 164 O SER Z 154 SHEET 1 CHF 5 THR Z 206 TRP Z 208 0 SHEET 2 CHF 5 TRP Z 109 VAL Z 112 -1 N LEU Z 111 O THR Z 206 SHEET 3 CHF 5 GLN Z 497 ALA Z 503 -1 N LEU Z 498 O VAL Z 112 SHEET 4 CHF 5 SER Z 172 ASP Z 178 -1 N MET Z 174 O LYS Z 501 SHEET 5 CHF 5 PRO Z 251 LEU Z 255 -1 N HIS Z 253 O VAL Z 175 SHEET 1 BCE 3 ARG Z 80 VAL Z 84 0 SHEET 2 BCE 3 HIS Z 102 THR Z 107 -1 N GLN Z 104 O VAL Z 82 SHEET 3 BCE 3 TRP Z 208 PHE Z 212 -1 N TYR Z 210 O ILE Z 105 SHEET 1 EF 2 ASP Z 215 ILE Z 219 0 SHEET 2 EF 2 THR Z 230 HIS Z 234 -1 N HIS Z 234 O ASP Z 215 SHEET 1 GH1 2 GLY Z 351 THR Z 355 0 SHEET 2 GH1 2 TYR Z 343 SER Z 348 -1 N SER Z 348 O GLY Z 351 SHEET 1 GH2 2 GLU Z 396 TYR Z 400 0 SHEET 2 GH2 2 PRO Z 376 PHE Z 380 -1 N PHE Z 380 O GLU Z 396 SHEET 1 GH3 2 ILE Z 469 ASP Z 471 0 SHEET 2 GH3 2 PHE Z 488 CYS Z 490 1 N CYS Z 490 O ASP Z 471 SSBOND 1 CYS Z 490 CYS Z 494 1555 1555 2.09 LINK OP1 DA N 3 MG MG N 13 1555 1555 2.60 LINK OP1 DC N 4 MG MG N 12 1555 1555 2.01 LINK OP1 DT N 6 MG MG N 12 1555 1555 2.26 LINK OP2 DC N 7 MG MG N 12 1555 1555 2.42 LINK OP2 DT N 9 MG MG N 12 1555 1555 2.19 LINK OP1 DT N 9 MG MG N 13 1555 1555 2.20 LINK MG MG N 12 OD1 ASN Z 180 1555 1555 2.10 LINK OD2 ASP Z 237 MG MG Z 585 1555 1555 2.12 LINK OD2 ASP Z 237 MG MG Z 586 1555 1555 3.02 LINK OD1 ASP Z 237 MG MG Z 586 1555 1555 2.41 LINK OD2 ASP Z 239 MG MG Z 586 1555 1555 1.77 LINK OD2 ASP Z 240 MG MG Z 585 1555 1555 1.55 LINK OD1 ASP Z 240 MG MG Z 585 1555 1555 3.13 CISPEP 1 TYR Z 342 TYR Z 343 0 -5.85 CISPEP 2 LEU Z 422 PRO Z 423 0 -0.51 CISPEP 3 TYR Z 464 PRO Z 465 0 0.96 SITE 1 AC1 5 DC N 4 DT N 6 DC N 7 DT N 9 SITE 2 AC1 5 ASN Z 180 SITE 1 AC2 2 DA N 3 DT N 9 SITE 1 AC3 2 ASP Z 237 ASP Z 240 SITE 1 AC4 2 ASP Z 237 ASP Z 239 CRYST1 263.210 349.010 267.320 90.00 90.82 90.00 P 1 21 1 120 ORIGX1 -0.567479 -0.030091 -0.822835 -91.80735 ORIGX2 0.011217 0.998953 -0.044266 -2.18655 ORIGX3 0.823312 -0.034354 -0.566549 16.83287 SCALE1 0.003799 0.000000 0.000054 0.00000 SCALE2 0.000000 0.002865 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003741 0.00000 MTRIX1 1 1.000000 0.000000 0.000000 0.00000 1 MTRIX2 1 0.000000 1.000000 0.000000 0.00000 1 MTRIX3 1 0.000000 0.000000 1.000000 0.00000 1 MTRIX1 2 0.420685 0.857252 -0.296873 -57.82013 MTRIX2 2 -0.882281 0.310420 -0.353871 -81.56334 MTRIX3 2 -0.211202 0.410798 0.886929 -21.39948 MTRIX1 3 -0.516661 0.504787 -0.691552 -145.71159 MTRIX2 3 -0.570302 -0.805346 -0.161782 -48.29596 MTRIX3 3 -0.638609 0.310815 0.703974 -61.67362 MTRIX1 4 -0.516658 -0.570301 -0.638604 -142.21138 MTRIX2 4 0.504793 -0.805348 0.310807 53.82775 MTRIX3 4 -0.691560 -0.161775 0.703972 -65.16492 MTRIX1 5 0.420690 -0.882276 -0.211202 -52.15666 MTRIX2 5 0.857259 0.310418 0.410794 83.67629 MTRIX3 5 -0.296878 -0.353870 0.886926 -27.04852 MTRIX1 6 0.355683 -0.056569 -0.932892 -104.14861 MTRIX2 6 -0.056562 -0.997640 0.038922 -1.15642 MTRIX3 6 -0.932895 0.038927 -0.358043 -151.27912 MTRIX1 7 0.396568 -0.095880 -0.912983 -100.13689 MTRIX2 7 0.848184 -0.342186 0.404349 82.65191 MTRIX3 7 -0.351180 -0.934726 -0.054382 -92.85208 MTRIX1 8 0.444247 -0.064856 -0.893552 -95.70884 MTRIX2 8 0.573323 0.786991 0.227916 52.86678 MTRIX3 8 0.688440 -0.613548 0.386795 4.85631 MTRIX1 9 0.432829 -0.006370 -0.901452 -96.98388 MTRIX2 9 -0.501296 0.829408 -0.246553 -49.34977 MTRIX3 9 0.749246 0.558604 0.355798 6.81638 MTRIX1 10 0.378093 -0.001248 -0.925765 -102.19994 MTRIX2 10 -0.890586 -0.273555 -0.363357 -82.73794 MTRIX3 10 -0.252794 0.961856 -0.104538 -89.68062 MTRIX1 11 -0.355934 0.034152 0.933885 -27.66827 MTRIX2 11 0.034151 -0.998189 0.049518 5.52497 MTRIX3 11 0.933888 0.049520 0.354123 18.87972 MTRIX1 12 -0.377106 0.089114 0.921872 -29.85832 MTRIX2 12 0.884592 -0.260240 0.387011 83.90633 MTRIX3 12 0.274390 0.961423 0.019312 -46.73493 MTRIX1 13 -0.431967 0.083090 0.898052 -35.04999 MTRIX2 13 0.520002 0.836518 0.172732 45.70333 MTRIX3 13 -0.736892 0.541600 -0.404550 -141.43035 MTRIX1 14 -0.444701 0.024406 0.895345 -36.06856 MTRIX2 14 -0.555768 0.776402 -0.297193 -56.28880 MTRIX3 14 -0.702401 -0.629767 -0.331701 -134.34069 MTRIX1 15 -0.397710 -0.005840 0.917491 -31.50640 MTRIX2 15 -0.856041 -0.357509 -0.373344 -81.12039 MTRIX3 15 0.330198 -0.933889 0.137185 -35.26362 MTRIX1 16 -0.999748 0.022417 -0.000993 -131.91501 MTRIX2 16 0.022411 0.995829 -0.088440 -4.36855 MTRIX3 16 -0.000993 -0.088447 -0.996081 -132.01220 MTRIX1 17 -0.440147 -0.850486 0.287985 -75.91654 MTRIX2 17 -0.850495 0.292006 -0.437489 -84.99490 MTRIX3 17 0.287992 -0.437495 -0.851859 -103.42511 MTRIX1 18 0.504382 -0.523021 0.687052 12.73855 MTRIX2 18 -0.523023 -0.818163 -0.238865 -50.27414 MTRIX3 18 0.687061 -0.238867 -0.686219 -66.16394 MTRIX1 19 0.528531 0.552265 0.644711 11.53194 MTRIX2 19 0.552271 -0.800462 0.232940 51.81082 MTRIX3 19 0.644715 0.232939 -0.728069 -71.72237 MTRIX1 20 -0.401073 0.889364 0.219476 -77.86887 MTRIX2 20 0.889367 0.320647 0.325907 80.18204 MTRIX3 20 0.219474 0.325903 -0.919574 -112.41884 MTRIX1 21 -0.470083 0.542497 -0.696212 -142.94857 MTRIX2 21 -0.802626 0.065411 0.592893 -13.72757 MTRIX3 21 0.367183 0.837506 0.404672 -15.14343 MTRIX1 22 -0.529351 -0.520580 -0.669910 -145.11762 MTRIX2 22 -0.520583 -0.424189 0.740985 14.65763 MTRIX3 22 -0.669915 0.740985 -0.046461 -113.34356 MTRIX1 23 0.378094 -0.890583 -0.252794 -57.71454 MTRIX2 23 -0.001245 -0.273553 0.961856 63.49938 MTRIX3 23 -0.925768 -0.363355 -0.104541 -134.05200 MTRIX1 24 0.998194 -0.056180 -0.021305 -1.52742 MTRIX2 24 0.037681 0.309144 0.950270 65.30005 MTRIX3 24 -0.046796 -0.949354 0.310696 -48.65039 MTRIX1 25 0.473991 0.829512 -0.295352 -54.20494 MTRIX2 25 -0.457599 0.518636 0.722238 17.57117 MTRIX3 25 0.752292 -0.207181 0.625407 24.83915 MTRIX1 26 0.451608 -0.541726 0.708925 10.70490 MTRIX2 26 -0.842287 0.003227 0.539028 -19.90315 MTRIX3 26 -0.294287 -0.840548 -0.454834 -115.57199 MTRIX1 27 0.518213 0.510204 0.686398 13.60724 MTRIX2 27 -0.471028 -0.499619 0.726990 16.99988 MTRIX3 27 0.713859 -0.700046 -0.018594 -20.26517 MTRIX1 28 -0.377107 0.884587 0.274396 -72.65840 MTRIX2 28 0.089109 -0.260235 0.961424 69.42814 MTRIX3 28 0.921874 0.387011 0.019309 -4.04463 MTRIX1 29 -0.997051 0.064039 0.042293 -128.87585 MTRIX2 29 0.064033 0.390557 0.918351 64.92756 MTRIX3 29 0.042288 0.918346 -0.393506 -89.32659 MTRIX1 30 -0.484877 -0.817471 0.310846 -77.35450 MTRIX2 30 -0.511601 0.553386 0.657296 9.71778 MTRIX3 30 -0.709341 0.159674 -0.686543 -158.25429 MTRIX1 31 -0.464339 -0.592046 -0.658685 -140.08919 MTRIX2 31 0.841612 -0.063344 -0.536364 20.03474 MTRIX3 31 0.275827 -0.803410 0.527682 -13.03546 MTRIX1 32 0.466126 -0.852425 -0.236849 -50.85631 MTRIX2 32 0.523221 0.481473 -0.703153 -11.98292 MTRIX3 32 0.713422 0.203830 0.670435 25.25284 MTRIX1 33 0.998193 0.037681 -0.046800 -3.21274 MTRIX2 33 -0.056176 0.309138 -0.949356 -66.45908 MTRIX3 33 -0.021306 0.950269 0.310703 -46.96931 MTRIX1 34 0.396564 0.848175 -0.351179 -63.00028 MTRIX2 34 -0.095873 -0.342188 -0.934730 -68.10953 MTRIX3 34 -0.912988 0.404354 -0.054376 -129.89334 MTRIX1 35 -0.507330 0.458982 -0.729345 -147.59458 MTRIX2 35 0.458990 -0.572394 -0.679486 -14.65341 MTRIX3 35 -0.729350 -0.679479 0.079725 -108.92107 MTRIX1 36 0.482814 0.591275 0.645972 8.60098 MTRIX2 36 0.803301 -0.005294 -0.595557 13.59598 MTRIX3 36 -0.348723 0.806452 -0.477520 -120.66073 MTRIX1 37 -0.454989 0.862800 0.220361 -81.36520 MTRIX2 37 0.468390 0.442335 -0.764821 -19.67458 MTRIX3 37 -0.757367 -0.244769 -0.605380 -156.05570 MTRIX1 38 -0.999180 -0.031685 0.025198 -130.14620 MTRIX2 38 -0.031687 0.224651 -0.973924 -66.46845 MTRIX3 38 0.025200 -0.973924 -0.225471 -79.34566 MTRIX1 39 -0.397706 -0.856034 0.330191 -70.32834 MTRIX2 39 -0.005841 -0.357514 -0.933892 -62.11808 MTRIX3 39 0.917496 -0.373346 0.137186 3.45872 MTRIX1 40 0.518216 -0.471023 0.713850 15.42214 MTRIX2 40 0.510210 -0.499627 -0.700048 -12.63554 MTRIX3 40 0.686399 0.726987 -0.018589 -22.07539 MTRIX1 41 -0.470081 -0.802615 0.367182 -72.65500 MTRIX2 41 0.542500 0.065408 0.837506 91.13026 MTRIX3 41 -0.696222 0.592893 0.404674 -85.25676 MTRIX1 42 0.432827 -0.501288 0.749242 12.13163 MTRIX2 42 -0.006369 0.829409 0.558609 36.50576 MTRIX3 42 -0.901456 -0.246552 0.355798 -102.01928 MTRIX1 43 0.466120 0.523218 0.713421 11.95890 MTRIX2 43 -0.852431 0.481481 0.203833 -42.72930 MTRIX3 43 -0.236846 -0.703149 0.670434 -37.40123 MTRIX1 44 -0.416212 0.855071 0.309224 -72.93448 MTRIX2 44 -0.826456 -0.497552 0.263467 -37.07476 MTRIX3 44 0.379141 -0.145895 0.913764 19.29746 MTRIX1 45 -0.994816 0.035661 0.095236 -125.22874 MTRIX2 45 0.035659 -0.754700 0.655099 45.65501 MTRIX3 45 0.095231 0.655103 0.749516 -10.27889 MTRIX1 46 -0.464345 0.841606 0.275829 -78.31557 MTRIX2 46 -0.592047 -0.063340 -0.803411 -92.14327 MTRIX3 46 -0.658687 -0.536357 0.527685 -74.65055 MTRIX1 47 -0.996132 -0.023500 0.084672 -126.01386 MTRIX2 47 -0.023500 -0.857235 -0.514392 -35.55219 MTRIX3 47 0.084670 -0.514385 0.853367 -4.11034 MTRIX1 48 -0.416207 -0.826448 0.379138 -68.31260 MTRIX2 48 0.855077 -0.497559 -0.145902 46.73326 MTRIX3 48 0.309219 0.263469 0.913766 14.68738 MTRIX1 49 0.473993 -0.457591 0.752286 15.04704 MTRIX2 49 0.829520 0.518628 -0.207182 40.99738 MTRIX3 49 -0.295359 0.722237 0.625413 -44.23521 MTRIX1 50 0.444242 0.573323 0.688437 8.86486 MTRIX2 50 -0.064852 0.786990 -0.613545 -44.83303 MTRIX3 50 -0.893558 0.227918 0.386802 -99.44909 MTRIX1 51 0.482816 0.803290 -0.348718 -57.15078 MTRIX2 51 0.591277 -0.005288 0.806453 92.29348 MTRIX3 51 0.645977 -0.595557 -0.477528 -55.07767 MTRIX1 52 -0.431965 0.520000 -0.736884 -143.12391 MTRIX2 52 0.083082 0.836520 0.541603 41.27942 MTRIX3 52 0.898057 0.172725 -0.404555 -33.63365 MTRIX1 53 -0.484876 -0.511595 -0.709338 -144.79159 MTRIX2 53 -0.817482 0.553385 0.159678 -43.34385 MTRIX3 53 0.310850 0.657288 -0.686543 -90.99015 MTRIX1 54 0.397204 -0.865864 -0.304148 -59.84914 MTRIX2 54 -0.865868 -0.463411 0.188485 -44.62985 MTRIX3 54 -0.304144 0.188482 -0.933793 -147.88243 MTRIX1 55 0.995270 -0.053221 -0.081272 -5.68415 MTRIX2 55 0.004793 -0.808690 0.588213 39.19863 MTRIX3 55 -0.097024 -0.585819 -0.804614 -125.68729 MTRIX1 56 0.451611 -0.842281 -0.294293 -55.61053 MTRIX2 56 -0.541730 0.003221 -0.840547 -91.28048 MTRIX3 56 0.708932 0.539021 -0.454832 -49.42662 MTRIX1 57 0.995270 0.004789 -0.097029 -6.72574 MTRIX2 57 -0.053214 -0.808694 -0.585821 -42.23299 MTRIX3 57 -0.081270 0.588212 -0.804610 -124.64833 MTRIX1 58 0.434963 0.814825 -0.383221 -62.58660 MTRIX2 58 0.814836 -0.537306 -0.217610 39.33989 MTRIX3 58 -0.383223 -0.217608 -0.897657 -150.70761 MTRIX1 59 -0.454985 0.468384 -0.757362 -145.99530 MTRIX2 59 0.862804 0.442335 -0.244770 40.70722 MTRIX3 59 0.220362 -0.764823 -0.605384 -91.59142 MTRIX1 60 -0.444696 -0.555763 -0.702401 -141.68385 MTRIX2 60 0.024400 0.776399 -0.629767 -40.02061 MTRIX3 60 0.895351 -0.297201 -0.331703 -28.99633