PDB Short entry for 4ED0
HEADER    TRANSFERASE/DNA                         26-MAR-12   4ED0              
TITLE     HUMAN DNA POLYMERASE ETA - DNA TERNARY COMPLEX: AT CRYSTAL AT PH 6.8  
TITLE    2 (NA+ MES) WITH 1 CA2+ ION                                            
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: DNA POLYMERASE ETA;                                        
COMPND   3 CHAIN: A;                                                            
COMPND   4 FRAGMENT: CATALYTIC CORE (UNP RESIDUES 1-432);                       
COMPND   5 SYNONYM: RAD30 HOMOLOG A, XERODERMA PIGMENTOSUM VARIANT TYPE PROTEIN;
COMPND   6 EC: 2.7.7.7;                                                         
COMPND   7 ENGINEERED: YES;                                                     
COMPND   8 MOL_ID: 2;                                                           
COMPND   9 MOLECULE: DNA (5'-D(*CP*AP*TP*TP*AP*TP*GP*AP*CP*GP*CP*T)-3');        
COMPND  10 CHAIN: T;                                                            
COMPND  11 ENGINEERED: YES;                                                     
COMPND  12 MOL_ID: 3;                                                           
COMPND  13 MOLECULE: DNA (5'-D(*AP*GP*CP*GP*TP*CP*AP*T)-3');                    
COMPND  14 CHAIN: P;                                                            
COMPND  15 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   3 ORGANISM_COMMON: HUMAN;                                              
SOURCE   4 ORGANISM_TAXID: 9606;                                                
SOURCE   5 GENE: POLH, RAD30, RAD30A, XPV;                                      
SOURCE   6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   7 EXPRESSION_SYSTEM_TAXID: 562;                                        
SOURCE   8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PLYSS;                            
SOURCE   9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;                              
SOURCE  10 EXPRESSION_SYSTEM_PLASMID: PET28;                                    
SOURCE  11 MOL_ID: 2;                                                           
SOURCE  12 SYNTHETIC: YES;                                                      
SOURCE  13 MOL_ID: 3;                                                           
SOURCE  14 SYNTHETIC: YES                                                       
KEYWDS    TRANSFERASE-DNA COMPLEX                                               
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    T.NAKAMURA,Y.ZHAO,W.YANG                                              
REVDAT   2   25-JUL-12 4ED0    1       JRNL                                     
REVDAT   1   11-JUL-12 4ED0    0                                                
JRNL        AUTH   T.NAKAMURA,Y.ZHAO,Y.YAMAGATA,Y.J.HUA,W.YANG                  
JRNL        TITL   WATCHING DNA POLYMERASE ETA MAKE A PHOSPHODIESTER BOND       
JRNL        REF    NATURE                        V. 487   196 2012              
JRNL        REFN                   ISSN 0028-0836                               
JRNL        PMID   22785315                                                     
JRNL        DOI    10.1038/NATURE11181                                          
REMARK   2                                                                      
REMARK   2 RESOLUTION.    1.65 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : PHENIX (PHENIX.REFINE: 1.6.1_357)                    
REMARK   3   AUTHORS     : PAUL ADAMS,PAVEL AFONINE,VICENT CHEN,IAN             
REMARK   3               : DAVIS,KRESHNA GOPAL,RALF GROSSE-                     
REMARK   3               : KUNSTLEVE,LI-WEI HUNG,ROBERT IMMORMINO,              
REMARK   3               : TOM IOERGER,AIRLIE MCCOY,ERIK MCKEE,NIGEL            
REMARK   3               : MORIARTY,REETAL PAI,RANDY READ,JANE                  
REMARK   3               : RICHARDSON,DAVID RICHARDSON,TOD ROMO,JIM             
REMARK   3               : SACCHETTINI,NICHOLAS SAUTER,JACOB SMITH,             
REMARK   3               : LAURENT STORONI,TOM TERWILLIGER,PETER                
REMARK   3               : ZWART                                                
REMARK   3                                                                      
REMARK   3    REFINEMENT TARGET : ML                                            
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 1.65                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 28.52                          
REMARK   3   MIN(FOBS/SIGMA_FOBS)              : 0.060                          
REMARK   3   COMPLETENESS FOR RANGE        (%) : 94.8                           
REMARK   3   NUMBER OF REFLECTIONS             : 51821                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   R VALUE     (WORKING + TEST SET) : 0.171                           
REMARK   3   R VALUE            (WORKING SET) : 0.170                           
REMARK   3   FREE R VALUE                     : 0.208                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 5.060                           
REMARK   3   FREE R VALUE TEST SET COUNT      : 2621                            
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT (IN BINS).                           
REMARK   3   BIN  RESOLUTION RANGE  COMPL.    NWORK NFREE   RWORK  RFREE        
REMARK   3     1 28.5213 -  4.4051    0.99     2773   156  0.1584 0.1787        
REMARK   3     2  4.4051 -  3.4985    1.00     2766   134  0.1361 0.1643        
REMARK   3     3  3.4985 -  3.0568    1.00     2730   145  0.1560 0.1830        
REMARK   3     4  3.0568 -  2.7776    0.99     2742   144  0.1785 0.2199        
REMARK   3     5  2.7776 -  2.5787    0.99     2703   139  0.1820 0.2245        
REMARK   3     6  2.5787 -  2.4267    0.99     2717   122  0.1787 0.2161        
REMARK   3     7  2.4267 -  2.3052    0.98     2689   140  0.1713 0.2048        
REMARK   3     8  2.3052 -  2.2049    0.98     2680   151  0.1599 0.2174        
REMARK   3     9  2.2049 -  2.1201    0.98     2677   129  0.1634 0.1971        
REMARK   3    10  2.1201 -  2.0469    0.97     2632   153  0.1681 0.2100        
REMARK   3    11  2.0469 -  1.9829    0.96     2608   142  0.1718 0.2244        
REMARK   3    12  1.9829 -  1.9263    0.96     2627   122  0.1722 0.2161        
REMARK   3    13  1.9263 -  1.8756    0.93     2525   147  0.1770 0.2410        
REMARK   3    14  1.8756 -  1.8298    0.93     2511   130  0.1833 0.2468        
REMARK   3    15  1.8298 -  1.7882    0.91     2491   145  0.1847 0.2629        
REMARK   3    16  1.7882 -  1.7502    0.91     2496   152  0.1860 0.2207        
REMARK   3    17  1.7502 -  1.7152    0.88     2344   137  0.2037 0.2577        
REMARK   3    18  1.7152 -  1.6828    0.86     2375   113  0.2216 0.2626        
REMARK   3    19  1.6828 -  1.6528    0.78     2114   120  0.2333 0.2554        
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELLING.                                             
REMARK   3   METHOD USED        : FLAT BULK SOLVENT MODEL                       
REMARK   3   SOLVENT RADIUS     : 1.11                                          
REMARK   3   SHRINKAGE RADIUS   : 0.90                                          
REMARK   3   K_SOL              : 0.34                                          
REMARK   3   B_SOL              : 36.81                                         
REMARK   3                                                                      
REMARK   3  ERROR ESTIMATES.                                                    
REMARK   3   COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED)     : 0.190            
REMARK   3   PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.010           
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : NULL                           
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : 21.21                          
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : 0.48140                                              
REMARK   3    B22 (A**2) : 0.48140                                              
REMARK   3    B33 (A**2) : -0.96290                                             
REMARK   3    B12 (A**2) : -0.00000                                             
REMARK   3    B13 (A**2) : -0.00000                                             
REMARK   3    B23 (A**2) : -0.00000                                             
REMARK   3                                                                      
REMARK   3  TWINNING INFORMATION.                                               
REMARK   3   FRACTION: NULL                                                     
REMARK   3   OPERATOR: NULL                                                     
REMARK   3                                                                      
REMARK   3  DEVIATIONS FROM IDEAL VALUES.                                       
REMARK   3                 RMSD          COUNT                                  
REMARK   3   BOND      :  0.007           4004                                  
REMARK   3   ANGLE     :  1.146           5497                                  
REMARK   3   CHIRALITY :  0.070            614                                  
REMARK   3   PLANARITY :  0.005            632                                  
REMARK   3   DIHEDRAL  : 18.234           1581                                  
REMARK   3                                                                      
REMARK   3  TLS DETAILS                                                         
REMARK   3   NUMBER OF TLS GROUPS  : NULL                                       
REMARK   3                                                                      
REMARK   3  NCS DETAILS                                                         
REMARK   3   NUMBER OF NCS GROUPS : NULL                                        
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 4ED0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 23-APR-12.                  
REMARK 100 THE RCSB ID CODE IS RCSB071462.                                      
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 23-JUL-11                          
REMARK 200  TEMPERATURE           (KELVIN) : 95                                 
REMARK 200  PH                             : 6.0                                
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : APS                                
REMARK 200  BEAMLINE                       : 22-BM                              
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 1                                  
REMARK 200  MONOCHROMATOR                  : NULL                               
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : CCD                                
REMARK 200  DETECTOR MANUFACTURER          : MARMOSAIC 225 MM CCD               
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : HKL-2000                           
REMARK 200  DATA SCALING SOFTWARE          : HKL-2000                           
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 54218                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 1.650                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 50.000                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : NULL                               
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 99.1                               
REMARK 200  DATA REDUNDANCY                : 3.700                              
REMARK 200  R MERGE                    (I) : NULL                               
REMARK 200  R SYM                      (I) : 0.06800                            
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 17.9000                            
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.65                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 1.68                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 92.0                               
REMARK 200  DATA REDUNDANCY IN SHELL       : 2.50                               
REMARK 200  R MERGE FOR SHELL          (I) : NULL                               
REMARK 200  R SYM FOR SHELL            (I) : 0.43300                            
REMARK 200  <I/SIGMA(I)> FOR SHELL         : 1.800                              
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS            
REMARK 200 SOFTWARE USED: NULL                                                  
REMARK 200 STARTING MODEL: NULL                                                 
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 42.07                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.12                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M MES, 6-17%(W/V) PEG 2K-MME, PH      
REMARK 280  6.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K                
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61                             
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -Y,X-Y,Z+1/3                                            
REMARK 290       3555   -X+Y,-X,Z+2/3                                           
REMARK 290       4555   -X,-Y,Z+1/2                                             
REMARK 290       5555   Y,-X+Y,Z+5/6                                            
REMARK 290       6555   X-Y,X,Z+1/6                                             
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -0.500000 -0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   2  0.866025 -0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000  1.000000       27.47700            
REMARK 290   SMTRY1   3 -0.500000  0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   3 -0.866025 -0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   3  0.000000  0.000000  1.000000       54.95400            
REMARK 290   SMTRY1   4 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   4  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   4  0.000000  0.000000  1.000000       41.21550            
REMARK 290   SMTRY1   5  0.500000  0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   5 -0.866025  0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   5  0.000000  0.000000  1.000000       68.69250            
REMARK 290   SMTRY1   6  0.500000 -0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   6  0.866025  0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   6  0.000000  0.000000  1.000000       13.73850            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC                          
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC                   
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 TOTAL BURIED SURFACE AREA: 5730 ANGSTROM**2                          
REMARK 350 SURFACE AREA OF THE COMPLEX: 22110 ANGSTROM**2                       
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -56.0 KCAL/MOL                        
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, T, P                               
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     THR A   155                                                      
REMARK 465     THR A   156                                                      
REMARK 465     ALA A   157                                                      
REMARK 465     GLU A   158                                                      
REMARK 465     GLU A   159                                                      
REMARK 470                                                                      
REMARK 470 MISSING ATOM                                                         
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;           
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;          
REMARK 470 I=INSERTION CODE):                                                   
REMARK 470   M RES CSSEQI  ATOMS                                                
REMARK 470      DC T   1    O5'  C5'  C4'  O4'  C3'  C2'  C1'                   
REMARK 470      DC T   1    N1   C2   O2   N3   C4   N4   C5                    
REMARK 470      DC T   1    C6                                                  
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES                                       
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)              
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   ATM2   ATM3                                     
REMARK 500     DG T   7   O4' -  C1' -  N9  ANGL. DEV. =   2.2 DEGREES          
REMARK 500     DA P   7   O4' -  C4' -  C3' ANGL. DEV. =  -2.8 DEGREES          
REMARK 500     DA P   7   O4' -  C1' -  N9  ANGL. DEV. =   2.1 DEGREES          
REMARK 500     DT P   8   N3  -  C4  -  O4  ANGL. DEV. =   4.0 DEGREES          
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    CYS A  16       64.79     25.00                                   
REMARK 500    TYR A  39      179.04     65.42                                   
REMARK 500    LYS A  40      -30.67   -157.66                                   
REMARK 500    SER A  62      -13.42     82.21                                   
REMARK 500    SER A 217     -155.27   -153.12                                   
REMARK 500    SER A 257      -11.10     96.73                                   
REMARK 500    LYS A 428       64.39     61.62                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 620                                                                      
REMARK 620 METAL COORDINATION                                                   
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):                             
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              NA A 501  NA                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 ASP A 115   OD2                                                    
REMARK 620 2 GLU A 116   OE1 114.9                                              
REMARK 620 3 ASP A  13   OD2  87.6 106.7                                        
REMARK 620 4  DT P   8   O3'  87.1  82.2 171.0                                  
REMARK 620 5 DTP P 502   O2A  94.3 147.7  87.0  86.1                            
REMARK 620 6 HOH A 939   O   155.5  88.8  91.4  90.4  61.2                      
REMARK 620 N                    1     2     3     4     5                       
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              CA A 503  CA                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 DTP P 502   O1B                                                    
REMARK 620 2 DTP P 502   O3G  81.0                                              
REMARK 620 3 MET A  14   O    88.9  97.8                                        
REMARK 620 4 DTP P 502   O2A  81.9  83.9 170.3                                  
REMARK 620 5 ASP A 115   OD1  82.4 163.3  83.6  92.1                            
REMARK 620 6 ASP A  13   OD2 147.6  81.7  66.6 123.1 113.7                      
REMARK 620 7 ASP A  13   OD1 151.2  73.1  82.5 107.2 123.5  16.8                
REMARK 620 N                    1     2     3     4     5     6                 
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 501                  
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC2                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DTP P 502                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC3                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 503                  
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC4                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 504                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC5                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 505                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC6                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 506                 
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 4ECQ   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 4ECR   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 4ECS   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 4ECT   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 4ECU   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 4ECV   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 4ECW   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 4ECX   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 4ECY   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 4ECZ   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 4ED1   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 4ED2   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 4ED3   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 4ED6   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 4ED7   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 4ED8   RELATED DB: PDB                                   
REMARK 999                                                                      
REMARK 999 SEQUENCE                                                             
REMARK 999 GLU A 116 HAS THE FOLLOWING ALTERNATE CONFIGURATION.                 
REMARK 999 ALTERNATE A HAS GLU 116 (OCCUPANCY 0.40),                            
REMARK 999 ALTERNATE B HAS GLU 116 (OCCUPANCY 0.60) + NA 501.                   
DBREF  4ED0 A    1   432  UNP    Q9Y253   POLH_HUMAN       1    432             
DBREF  4ED0 T    1    12  PDB    4ED0     4ED0             1     12             
DBREF  4ED0 P    1     8  PDB    4ED0     4ED0             1      8             
SEQADV 4ED0 GLY A   -2  UNP  Q9Y253              EXPRESSION TAG                 
SEQADV 4ED0 PRO A   -1  UNP  Q9Y253              EXPRESSION TAG                 
SEQADV 4ED0 HIS A    0  UNP  Q9Y253              EXPRESSION TAG                 
SEQRES   1 A  435  GLY PRO HIS MET ALA THR GLY GLN ASP ARG VAL VAL ALA          
SEQRES   2 A  435  LEU VAL ASP MET ASP CYS PHE PHE VAL GLN VAL GLU GLN          
SEQRES   3 A  435  ARG GLN ASN PRO HIS LEU ARG ASN LYS PRO CYS ALA VAL          
SEQRES   4 A  435  VAL GLN TYR LYS SER TRP LYS GLY GLY GLY ILE ILE ALA          
SEQRES   5 A  435  VAL SER TYR GLU ALA ARG ALA PHE GLY VAL THR ARG SER          
SEQRES   6 A  435  MET TRP ALA ASP ASP ALA LYS LYS LEU CYS PRO ASP LEU          
SEQRES   7 A  435  LEU LEU ALA GLN VAL ARG GLU SER ARG GLY LYS ALA ASN          
SEQRES   8 A  435  LEU THR LYS TYR ARG GLU ALA SER VAL GLU VAL MET GLU          
SEQRES   9 A  435  ILE MET SER ARG PHE ALA VAL ILE GLU ARG ALA SER ILE          
SEQRES  10 A  435  ASP GLU ALA TYR VAL ASP LEU THR SER ALA VAL GLN GLU          
SEQRES  11 A  435  ARG LEU GLN LYS LEU GLN GLY GLN PRO ILE SER ALA ASP          
SEQRES  12 A  435  LEU LEU PRO SER THR TYR ILE GLU GLY LEU PRO GLN GLY          
SEQRES  13 A  435  PRO THR THR ALA GLU GLU THR VAL GLN LYS GLU GLY MET          
SEQRES  14 A  435  ARG LYS GLN GLY LEU PHE GLN TRP LEU ASP SER LEU GLN          
SEQRES  15 A  435  ILE ASP ASN LEU THR SER PRO ASP LEU GLN LEU THR VAL          
SEQRES  16 A  435  GLY ALA VAL ILE VAL GLU GLU MET ARG ALA ALA ILE GLU          
SEQRES  17 A  435  ARG GLU THR GLY PHE GLN CYS SER ALA GLY ILE SER HIS          
SEQRES  18 A  435  ASN LYS VAL LEU ALA LYS LEU ALA CYS GLY LEU ASN LYS          
SEQRES  19 A  435  PRO ASN ARG GLN THR LEU VAL SER HIS GLY SER VAL PRO          
SEQRES  20 A  435  GLN LEU PHE SER GLN MET PRO ILE ARG LYS ILE ARG SER          
SEQRES  21 A  435  LEU GLY GLY LYS LEU GLY ALA SER VAL ILE GLU ILE LEU          
SEQRES  22 A  435  GLY ILE GLU TYR MET GLY GLU LEU THR GLN PHE THR GLU          
SEQRES  23 A  435  SER GLN LEU GLN SER HIS PHE GLY GLU LYS ASN GLY SER          
SEQRES  24 A  435  TRP LEU TYR ALA MET CYS ARG GLY ILE GLU HIS ASP PRO          
SEQRES  25 A  435  VAL LYS PRO ARG GLN LEU PRO LYS THR ILE GLY CYS SER          
SEQRES  26 A  435  LYS ASN PHE PRO GLY LYS THR ALA LEU ALA THR ARG GLU          
SEQRES  27 A  435  GLN VAL GLN TRP TRP LEU LEU GLN LEU ALA GLN GLU LEU          
SEQRES  28 A  435  GLU GLU ARG LEU THR LYS ASP ARG ASN ASP ASN ASP ARG          
SEQRES  29 A  435  VAL ALA THR GLN LEU VAL VAL SER ILE ARG VAL GLN GLY          
SEQRES  30 A  435  ASP LYS ARG LEU SER SER LEU ARG ARG CYS CYS ALA LEU          
SEQRES  31 A  435  THR ARG TYR ASP ALA HIS LYS MET SER HIS ASP ALA PHE          
SEQRES  32 A  435  THR VAL ILE LYS ASN CYS ASN THR SER GLY ILE GLN THR          
SEQRES  33 A  435  GLU TRP SER PRO PRO LEU THR MET LEU PHE LEU CYS ALA          
SEQRES  34 A  435  THR LYS PHE SER ALA SER                                      
SEQRES   1 T   12   DC  DA  DT  DT  DA  DT  DG  DA  DC  DG  DC  DT              
SEQRES   1 P    8   DA  DG  DC  DG  DT  DC  DA  DT                              
HET     NA  A 501       1                                                       
HET    DTP  P 502      30                                                       
HET     CA  A 503       1                                                       
HET    GOL  A 504       6                                                       
HET    GOL  A 505       6                                                       
HET    GOL  A 506       6                                                       
HETNAM      NA SODIUM ION                                                       
HETNAM     DTP 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE                                
HETNAM      CA CALCIUM ION                                                      
HETNAM     GOL GLYCEROL                                                         
HETSYN     GOL GLYCERIN; PROPANE-1,2,3-TRIOL                                    
FORMUL   4   NA    NA 1+                                                        
FORMUL   5  DTP    C10 H16 N5 O12 P3                                            
FORMUL   6   CA    CA 2+                                                        
FORMUL   7  GOL    3(C3 H8 O3)                                                  
FORMUL  10  HOH   *550(H2 O)                                                    
HELIX    1   1 CYS A   16  ASN A   26  1                                  11    
HELIX    2   2 PRO A   27  ARG A   30  5                                   4    
HELIX    3   3 SER A   51  ALA A   56  1                                   6    
HELIX    4   4 TRP A   64  CYS A   72  1                                   9    
HELIX    5   5 LEU A   89  SER A  104  1                                  16    
HELIX    6   6 LEU A  121  GLN A  133  1                                  13    
HELIX    7   7 SER A  138  LEU A  142  5                                   5    
HELIX    8   8 GLN A  162  LEU A  178  1                                  17    
HELIX    9   9 SER A  185  GLY A  209  1                                  25    
HELIX   10  10 ASN A  219  GLY A  228  1                                  10    
HELIX   11  11 SER A  239  GLY A  241  5                                   3    
HELIX   12  12 SER A  242  GLN A  249  1                                   8    
HELIX   13  13 MET A  250  ILE A  255  5                                   6    
HELIX   14  14 GLY A  260  GLY A  271  1                                  12    
HELIX   15  15 TYR A  274  PHE A  281  5                                   8    
HELIX   16  16 THR A  282  GLY A  291  1                                  10    
HELIX   17  17 GLY A  291  CYS A  302  1                                  12    
HELIX   18  18 PRO A  326  ALA A  330  5                                   5    
HELIX   19  19 ARG A  334  ASP A  360  1                                  27    
HELIX   20  20 ASP A  391  LYS A  404  1                                  14    
SHEET    1   A 6 ILE A 109  SER A 113  0                                        
SHEET    2   A 6 GLU A 116  ASP A 120 -1  O  TYR A 118   N  GLU A 110           
SHEET    3   A 6 VAL A   9  MET A  14 -1  N  VAL A  12   O  ALA A 117           
SHEET    4   A 6 CYS A 212  SER A 217 -1  O  SER A 217   N  VAL A   9           
SHEET    5   A 6 GLN A 235  LEU A 237  1  O  THR A 236   N  ILE A 216           
SHEET    6   A 6 THR A 145  ILE A 147  1  N  TYR A 146   O  LEU A 237           
SHEET    1   B 3 GLY A  46  VAL A  50  0                                        
SHEET    2   B 3 CYS A  34  GLN A  38 -1  N  VAL A  36   O  ILE A  48           
SHEET    3   B 3 LEU A  76  GLN A  79  1  O  ALA A  78   N  VAL A  37           
SHEET    1   C 2 GLU A  82  SER A  83  0                                        
SHEET    2   C 2 LYS A  86  ALA A  87 -1  O  LYS A  86   N  SER A  83           
SHEET    1   D 3 ILE A 319  ASN A 324  0                                        
SHEET    2   D 3 GLU A 414  ALA A 431 -1  O  ALA A 426   N  ILE A 319           
SHEET    3   D 3 LEU A 331  THR A 333 -1  N  LEU A 331   O  LEU A 419           
SHEET    1   E 4 ILE A 319  ASN A 324  0                                        
SHEET    2   E 4 GLU A 414  ALA A 431 -1  O  ALA A 426   N  ILE A 319           
SHEET    3   E 4 ARG A 361  VAL A 372 -1  N  VAL A 367   O  CYS A 425           
SHEET    4   E 4 LEU A 381  ALA A 386 -1  O  ARG A 383   N  VAL A 368           
LINK         OD2 ASP A 115                NA  B NA A 501     1555   1555  2.24  
LINK         OE1BGLU A 116                NA  B NA A 501     1555   1555  2.33  
LINK         O1B DTP P 502                CA    CA A 503     1555   1555  2.34  
LINK         O3G DTP P 502                CA    CA A 503     1555   1555  2.34  
LINK         O   MET A  14                CA    CA A 503     1555   1555  2.35  
LINK         O2A DTP P 502                CA    CA A 503     1555   1555  2.36  
LINK         OD2BASP A  13                NA  B NA A 501     1555   1555  2.37  
LINK         OD1 ASP A 115                CA    CA A 503     1555   1555  2.37  
LINK         O3'  DT P   8                NA  B NA A 501     1555   1555  2.42  
LINK        NA  B NA A 501                 O2A DTP P 502     1555   1555  2.51  
LINK         OD2AASP A  13                CA    CA A 503     1555   1555  2.55  
LINK         OD2BASP A  13                CA    CA A 503     1555   1555  2.57  
LINK         OD1BASP A  13                CA    CA A 503     1555   1555  2.62  
LINK        NA  B NA A 501                 O   HOH A 939     1555   1555  3.15  
CISPEP   1 LEU A  150    PRO A  151          0        -0.44                     
CISPEP   2 LYS A  231    PRO A  232          0        -0.42                     
CISPEP   3 SER A  416    PRO A  417          0        -6.99                     
SITE     1 AC1  7 ASP A  13  SER A 113  ASP A 115  GLU A 116                    
SITE     2 AC1  7  CA A 503   DT P   8  DTP P 502                               
SITE     1 AC2 27 ASP A  13  MET A  14  ASP A  15  CYS A  16                    
SITE     2 AC2 27 PHE A  17  PHE A  18  ILE A  48  ALA A  49                    
SITE     3 AC2 27 TYR A  52  ARG A  55  ARG A  61  ASP A 115                    
SITE     4 AC2 27 LYS A 231   NA A 501   CA A 503  HOH A 606                    
SITE     5 AC2 27 HOH A 623  HOH A 652  HOH A 707  HOH A 792                    
SITE     6 AC2 27 HOH A 939  HOH A1033   DT P   8  HOH P 101                    
SITE     7 AC2 27 HOH P 111   DT T   4   DA T   5                               
SITE     1 AC3  5 ASP A  13  MET A  14  ASP A 115   NA A 501                    
SITE     2 AC3  5 DTP P 502                                                     
SITE     1 AC4 10 ARG A  24  PRO A 244  PHE A 247  SER A 248                    
SITE     2 AC4 10 GLY A 276  GLU A 277  HOH A 601  HOH A 624                    
SITE     3 AC4 10 HOH A 663  HOH A 693                                          
SITE     1 AC5  9 GLU A  94  ALA A  95  GLU A  98  ARG A 303                    
SITE     2 AC5  9 HOH A 637  HOH A 639  HOH A 762  HOH A 812                    
SITE     3 AC5  9 HOH A 814                                                     
SITE     1 AC6 10 ASN A  26  PRO A  27  HIS A  28  GLY A 271                    
SITE     2 AC6 10 GLU A 273  TYR A 274  GLU A 277  HOH A 745                    
SITE     3 AC6 10 HOH A 833  HOH A 959                                          
CRYST1   98.786   98.786   82.431  90.00  90.00 120.00 P 61          6          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.010123  0.005844  0.000000        0.00000                         
SCALE2      0.000000  0.011689  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.012131        0.00000