PDB Short entry for 4EMU HEADER MEMBRANE PROTEIN 12-APR-12 4EMU TITLE CRYSTAL STRUCTURE OF LIGAND FREE HUMAN STING COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSMEMBRANE PROTEIN 173; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 155 - 341; COMPND 5 SYNONYM: ENDOPLASMIC RETICULUM INTERFERON STIMULATOR, ERIS, MEDIATOR COMPND 6 OF IRF3 ACTIVATION, HMITA, STIMULATOR OF INTERFERON GENES PROTEIN, COMPND 7 HSTING; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TMEM173, ERIS, MITA, STING; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ALPHA/BETA FOLD, INNATE IMMUNE SENSOR, C-DI-GMP, MEMBRANE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR P.LI REVDAT 6 28-FEB-24 4EMU 1 REMARK SEQADV LINK REVDAT 5 15-NOV-17 4EMU 1 REMARK REVDAT 4 25-JUL-12 4EMU 1 JRNL REVDAT 3 11-JUL-12 4EMU 1 JRNL REVDAT 2 27-JUN-12 4EMU 1 REVDAT 1 13-JUN-12 4EMU 0 JRNL AUTH C.SHU,G.YI,T.WATTS,C.C.KAO,P.LI JRNL TITL STRUCTURE OF STING BOUND TO CYCLIC DI-GMP REVEALS THE JRNL TITL 2 MECHANISM OF CYCLIC DINUCLEOTIDE RECOGNITION BY THE IMMUNE JRNL TITL 3 SYSTEM. JRNL REF NAT.STRUCT.MOL.BIOL. V. 19 722 2012 JRNL REFN ISSN 1545-9993 JRNL PMID 22728658 JRNL DOI 10.1038/NSMB.2331 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7.1_743) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.35 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 27787 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.213 REMARK 3 R VALUE (WORKING SET) : 0.211 REMARK 3 FREE R VALUE : 0.248 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.200 REMARK 3 FREE R VALUE TEST SET COUNT : 2000 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 37.3554 - 4.5767 0.98 1935 149 0.2075 0.2105 REMARK 3 2 4.5767 - 3.6336 0.99 1857 145 0.1733 0.2069 REMARK 3 3 3.6336 - 3.1746 0.99 1869 145 0.2037 0.2500 REMARK 3 4 3.1746 - 2.8845 1.00 1838 143 0.2125 0.2378 REMARK 3 5 2.8845 - 2.6778 0.99 1844 142 0.2295 0.3101 REMARK 3 6 2.6778 - 2.5199 1.00 1841 143 0.2196 0.2575 REMARK 3 7 2.5199 - 2.3938 1.00 1831 143 0.2112 0.2409 REMARK 3 8 2.3938 - 2.2896 1.00 1842 142 0.2180 0.2842 REMARK 3 9 2.2896 - 2.2014 1.00 1809 141 0.2082 0.2726 REMARK 3 10 2.2014 - 2.1255 1.00 1837 142 0.2227 0.2910 REMARK 3 11 2.1255 - 2.0590 0.99 1812 141 0.2499 0.3307 REMARK 3 12 2.0590 - 2.0002 1.00 1812 140 0.2655 0.3373 REMARK 3 13 2.0002 - 1.9475 1.00 1818 140 0.2912 0.3093 REMARK 3 14 1.9475 - 1.9000 0.99 1842 144 0.3237 0.4024 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.83 REMARK 3 K_SOL : 0.34 REMARK 3 B_SOL : 45.26 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.570 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.810 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 19.59240 REMARK 3 B22 (A**2) : -9.15500 REMARK 3 B33 (A**2) : -10.43740 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 2884 REMARK 3 ANGLE : 1.063 3910 REMARK 3 CHIRALITY : 0.073 428 REMARK 3 PLANARITY : 0.004 518 REMARK 3 DIHEDRAL : 14.916 1088 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 154:203) REMARK 3 ORIGIN FOR THE GROUP (A): 58.4077 19.8622 60.1062 REMARK 3 T TENSOR REMARK 3 T11: 0.4053 T22: 0.5723 REMARK 3 T33: 0.2474 T12: 0.3895 REMARK 3 T13: -0.1289 T23: 0.0189 REMARK 3 L TENSOR REMARK 3 L11: 0.3451 L22: 0.4460 REMARK 3 L33: 0.2224 L12: 0.4360 REMARK 3 L13: -0.1691 L23: -0.3332 REMARK 3 S TENSOR REMARK 3 S11: 0.1154 S12: 0.1006 S13: -0.3264 REMARK 3 S21: -0.1350 S22: -0.2974 S23: 0.1642 REMARK 3 S31: 0.3777 S32: 0.9426 S33: -0.0435 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 204:241) REMARK 3 ORIGIN FOR THE GROUP (A): 46.7467 18.0341 59.3732 REMARK 3 T TENSOR REMARK 3 T11: 0.6644 T22: 0.3685 REMARK 3 T33: 0.4226 T12: 0.1157 REMARK 3 T13: -0.0539 T23: -0.0232 REMARK 3 L TENSOR REMARK 3 L11: 0.0072 L22: 0.1910 REMARK 3 L33: 0.0916 L12: 0.0609 REMARK 3 L13: 0.0024 L23: -0.1459 REMARK 3 S TENSOR REMARK 3 S11: 0.0828 S12: -0.0717 S13: -0.0424 REMARK 3 S21: 0.3429 S22: -0.3303 S23: 0.1131 REMARK 3 S31: 0.7731 S32: -0.1373 S33: -0.0429 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 242:314) REMARK 3 ORIGIN FOR THE GROUP (A): 49.3926 27.8996 66.2946 REMARK 3 T TENSOR REMARK 3 T11: 0.2354 T22: 0.2936 REMARK 3 T33: 0.2531 T12: 0.0296 REMARK 3 T13: -0.0411 T23: 0.0618 REMARK 3 L TENSOR REMARK 3 L11: 1.0835 L22: 0.4254 REMARK 3 L33: 0.9779 L12: -0.1782 REMARK 3 L13: 0.6795 L23: -0.8605 REMARK 3 S TENSOR REMARK 3 S11: 0.1951 S12: -0.0240 S13: -0.1687 REMARK 3 S21: 0.0544 S22: -0.0387 S23: 0.1150 REMARK 3 S31: 0.0302 S32: 0.2888 S33: 0.0955 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 315:337) REMARK 3 ORIGIN FOR THE GROUP (A): 46.1567 33.9087 54.6062 REMARK 3 T TENSOR REMARK 3 T11: 0.4532 T22: 0.3747 REMARK 3 T33: 0.2542 T12: 0.0743 REMARK 3 T13: 0.0015 T23: 0.0167 REMARK 3 L TENSOR REMARK 3 L11: 0.0269 L22: 0.0182 REMARK 3 L33: 0.1862 L12: 0.0074 REMARK 3 L13: 0.0961 L23: 0.0178 REMARK 3 S TENSOR REMARK 3 S11: 0.1759 S12: 0.3139 S13: 0.2043 REMARK 3 S21: -0.1031 S22: -0.1983 S23: -0.0568 REMARK 3 S31: -0.2426 S32: -0.0637 S33: 0.0001 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 154:185) REMARK 3 ORIGIN FOR THE GROUP (A): 44.1571 9.7496 84.1215 REMARK 3 T TENSOR REMARK 3 T11: -0.2248 T22: 0.4149 REMARK 3 T33: 0.4680 T12: -0.1324 REMARK 3 T13: -0.2758 T23: 0.2395 REMARK 3 L TENSOR REMARK 3 L11: 0.7847 L22: 0.1879 REMARK 3 L33: 2.0310 L12: -0.0094 REMARK 3 L13: -0.3905 L23: 0.1721 REMARK 3 S TENSOR REMARK 3 S11: 0.2196 S12: -0.1402 S13: -0.1710 REMARK 3 S21: 0.0235 S22: 0.3831 S23: 0.3469 REMARK 3 S31: -0.7606 S32: -0.9155 S33: 0.5982 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 186:218) REMARK 3 ORIGIN FOR THE GROUP (A): 54.9900 1.6241 90.1311 REMARK 3 T TENSOR REMARK 3 T11: 0.3304 T22: 0.2104 REMARK 3 T33: 0.3400 T12: -0.0244 REMARK 3 T13: -0.0263 T23: 0.0632 REMARK 3 L TENSOR REMARK 3 L11: -0.0325 L22: 0.1383 REMARK 3 L33: 0.4195 L12: 0.0798 REMARK 3 L13: 0.1121 L23: 0.1133 REMARK 3 S TENSOR REMARK 3 S11: -0.1881 S12: 0.1362 S13: -0.1091 REMARK 3 S21: -0.1900 S22: 0.3629 S23: 0.1831 REMARK 3 S31: 0.2948 S32: 0.0608 S33: 0.0383 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 219:262) REMARK 3 ORIGIN FOR THE GROUP (A): 52.9584 -0.7769 88.0365 REMARK 3 T TENSOR REMARK 3 T11: 0.4216 T22: 0.2222 REMARK 3 T33: 0.4409 T12: -0.0601 REMARK 3 T13: -0.1132 T23: 0.0488 REMARK 3 L TENSOR REMARK 3 L11: 0.3042 L22: 0.1093 REMARK 3 L33: 0.1947 L12: 0.0159 REMARK 3 L13: -0.1872 L23: 0.1129 REMARK 3 S TENSOR REMARK 3 S11: 0.0753 S12: 0.0387 S13: -0.1664 REMARK 3 S21: -0.1840 S22: 0.0782 S23: 0.1226 REMARK 3 S31: 0.4914 S32: 0.1321 S33: 0.0004 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 263:314) REMARK 3 ORIGIN FOR THE GROUP (A): 55.3849 20.3906 88.7040 REMARK 3 T TENSOR REMARK 3 T11: 0.2820 T22: 0.2302 REMARK 3 T33: 0.2494 T12: 0.0126 REMARK 3 T13: -0.0240 T23: 0.0450 REMARK 3 L TENSOR REMARK 3 L11: 0.5719 L22: 0.4987 REMARK 3 L33: 0.3993 L12: -0.4629 REMARK 3 L13: 0.5508 L23: -0.4222 REMARK 3 S TENSOR REMARK 3 S11: -0.1441 S12: -0.0237 S13: 0.2160 REMARK 3 S21: 0.1945 S22: 0.0824 S23: 0.1330 REMARK 3 S31: -0.4060 S32: 0.0303 S33: -0.0000 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 315:337) REMARK 3 ORIGIN FOR THE GROUP (A): 58.2260 7.0688 100.7765 REMARK 3 T TENSOR REMARK 3 T11: 0.3398 T22: 0.3067 REMARK 3 T33: 0.3080 T12: 0.0205 REMARK 3 T13: 0.0061 T23: 0.0859 REMARK 3 L TENSOR REMARK 3 L11: 0.0659 L22: 0.1111 REMARK 3 L33: 0.1747 L12: -0.0764 REMARK 3 L13: 0.0532 L23: 0.0042 REMARK 3 S TENSOR REMARK 3 S11: 0.0674 S12: -0.1193 S13: 0.0237 REMARK 3 S21: -0.0481 S22: 0.0897 S23: 0.1476 REMARK 3 S31: 0.1668 S32: -0.0135 S33: -0.0012 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4EMU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-APR-12. REMARK 100 THE DEPOSITION ID IS D_1000071816. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-MAR-12 REMARK 200 TEMPERATURE (KELVIN) : 120 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL11-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9794 REMARK 200 MONOCHROMATOR : SI CRYSTAL REMARK 200 OPTICS : SI CRYSTAL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS, SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27829 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 39.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.90 REMARK 200 R MERGE FOR SHELL (I) : 0.67400 REMARK 200 R SYM FOR SHELL (I) : 0.67400 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: FOURIER SYNTHESIS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.03 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES, PH 8.5, 28% PEG400, 0.2M REMARK 280 CACL2, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 63.88400 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 63.88400 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 34.96550 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 39.05400 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 34.96550 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 39.05400 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 63.88400 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 34.96550 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 39.05400 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 63.88400 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 34.96550 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 39.05400 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1650 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18040 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -19.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4360 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 35030 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -54.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 139.86200 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 191.65200 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 556 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 572 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN A 228 REMARK 465 THR A 229 REMARK 465 GLY A 230 REMARK 465 ASP A 231 REMARK 465 HIS A 232 REMARK 465 ALA A 233 REMARK 465 GLY A 234 REMARK 465 ILE A 235 REMARK 465 LYS A 236 REMARK 465 LYS A 338 REMARK 465 GLU A 339 REMARK 465 GLU A 340 REMARK 465 VAL A 341 REMARK 465 GLN B 228 REMARK 465 THR B 229 REMARK 465 GLY B 230 REMARK 465 ASP B 231 REMARK 465 HIS B 232 REMARK 465 ALA B 233 REMARK 465 GLY B 234 REMARK 465 ILE B 235 REMARK 465 LYS B 236 REMARK 465 LYS B 338 REMARK 465 GLU B 339 REMARK 465 GLU B 340 REMARK 465 VAL B 341 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ASP A 319 N SER A 321 1.99 REMARK 500 O HOH B 567 O HOH B 587 2.00 REMARK 500 NE2 GLN B 315 O HOH B 565 2.02 REMARK 500 O GLY A 166 NH1 ARG A 238 2.07 REMARK 500 O HOH B 557 O HOH B 573 2.09 REMARK 500 OE1 GLU B 246 O HOH B 555 2.12 REMARK 500 OE2 GLU A 328 NH2 ARG A 331 2.13 REMARK 500 OG SER A 275 O HOH A 416 2.13 REMARK 500 O HOH B 537 O HOH B 551 2.15 REMARK 500 O HOH A 452 O HOH A 453 2.15 REMARK 500 NE ARG B 334 O HOH B 579 2.15 REMARK 500 OH TYR B 164 O HOH B 577 2.17 REMARK 500 N PHE B 221 O HOH B 588 2.17 REMARK 500 O HOH B 549 O HOH B 552 2.17 REMARK 500 O HOH B 536 O HOH B 566 2.18 REMARK 500 OE2 GLU B 286 O HOH B 544 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 521 O HOH B 538 3756 1.90 REMARK 500 O LEU A 189 ND2 ASN B 188 4556 2.03 REMARK 500 O HOH B 526 O HOH B 529 7646 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 167 -70.79 -135.13 REMARK 500 LEU A 190 -70.92 -79.24 REMARK 500 ARG A 191 106.57 19.69 REMARK 500 ALA A 193 151.87 -47.99 REMARK 500 CYS A 206 9.73 59.52 REMARK 500 ASN A 211 110.88 -170.28 REMARK 500 MET A 214 -19.95 159.64 REMARK 500 PRO A 226 171.31 -57.37 REMARK 500 ASP A 319 94.39 -57.51 REMARK 500 ASP A 320 44.63 -48.03 REMARK 500 GLU A 336 -79.85 -77.25 REMARK 500 TYR B 167 -68.20 -137.56 REMARK 500 ASN B 183 36.10 -66.41 REMARK 500 GLN B 184 -74.06 -173.28 REMARK 500 HIS B 185 -14.94 -48.71 REMARK 500 TYR B 186 49.27 -103.64 REMARK 500 ASN B 211 -121.88 -113.76 REMARK 500 LEU B 212 -33.70 177.15 REMARK 500 GLN B 335 45.09 -103.65 REMARK 500 GLU B 336 -85.92 -138.30 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 401 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA B 318 O REMARK 620 2 ASP B 320 OD1 86.5 REMARK 620 3 HOH B 502 O 78.8 85.4 REMARK 620 4 HOH B 503 O 82.3 85.9 159.7 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 401 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4EMT RELATED DB: PDB DBREF 4EMU A 155 341 UNP Q86WV6 TM173_HUMAN 155 341 DBREF 4EMU B 155 341 UNP Q86WV6 TM173_HUMAN 155 341 SEQADV 4EMU SER A 154 UNP Q86WV6 EXPRESSION TAG SEQADV 4EMU SER B 154 UNP Q86WV6 EXPRESSION TAG SEQRES 1 A 188 SER VAL ALA HIS GLY LEU ALA TRP SER TYR TYR ILE GLY SEQRES 2 A 188 TYR LEU ARG LEU ILE LEU PRO GLU LEU GLN ALA ARG ILE SEQRES 3 A 188 ARG THR TYR ASN GLN HIS TYR ASN ASN LEU LEU ARG GLY SEQRES 4 A 188 ALA VAL SER GLN ARG LEU TYR ILE LEU LEU PRO LEU ASP SEQRES 5 A 188 CYS GLY VAL PRO ASP ASN LEU SER MET ALA ASP PRO ASN SEQRES 6 A 188 ILE ARG PHE LEU ASP LYS LEU PRO GLN GLN THR GLY ASP SEQRES 7 A 188 HIS ALA GLY ILE LYS ASP ARG VAL TYR SER ASN SER ILE SEQRES 8 A 188 TYR GLU LEU LEU GLU ASN GLY GLN ARG ALA GLY THR CYS SEQRES 9 A 188 VAL LEU GLU TYR ALA THR PRO LEU GLN THR LEU PHE ALA SEQRES 10 A 188 MET SER GLN TYR SER GLN ALA GLY PHE SER ARG GLU ASP SEQRES 11 A 188 ARG LEU GLU GLN ALA LYS LEU PHE CYS ARG THR LEU GLU SEQRES 12 A 188 ASP ILE LEU ALA ASP ALA PRO GLU SER GLN ASN ASN CYS SEQRES 13 A 188 ARG LEU ILE ALA TYR GLN GLU PRO ALA ASP ASP SER SER SEQRES 14 A 188 PHE SER LEU SER GLN GLU VAL LEU ARG HIS LEU ARG GLN SEQRES 15 A 188 GLU GLU LYS GLU GLU VAL SEQRES 1 B 188 SER VAL ALA HIS GLY LEU ALA TRP SER TYR TYR ILE GLY SEQRES 2 B 188 TYR LEU ARG LEU ILE LEU PRO GLU LEU GLN ALA ARG ILE SEQRES 3 B 188 ARG THR TYR ASN GLN HIS TYR ASN ASN LEU LEU ARG GLY SEQRES 4 B 188 ALA VAL SER GLN ARG LEU TYR ILE LEU LEU PRO LEU ASP SEQRES 5 B 188 CYS GLY VAL PRO ASP ASN LEU SER MET ALA ASP PRO ASN SEQRES 6 B 188 ILE ARG PHE LEU ASP LYS LEU PRO GLN GLN THR GLY ASP SEQRES 7 B 188 HIS ALA GLY ILE LYS ASP ARG VAL TYR SER ASN SER ILE SEQRES 8 B 188 TYR GLU LEU LEU GLU ASN GLY GLN ARG ALA GLY THR CYS SEQRES 9 B 188 VAL LEU GLU TYR ALA THR PRO LEU GLN THR LEU PHE ALA SEQRES 10 B 188 MET SER GLN TYR SER GLN ALA GLY PHE SER ARG GLU ASP SEQRES 11 B 188 ARG LEU GLU GLN ALA LYS LEU PHE CYS ARG THR LEU GLU SEQRES 12 B 188 ASP ILE LEU ALA ASP ALA PRO GLU SER GLN ASN ASN CYS SEQRES 13 B 188 ARG LEU ILE ALA TYR GLN GLU PRO ALA ASP ASP SER SER SEQRES 14 B 188 PHE SER LEU SER GLN GLU VAL LEU ARG HIS LEU ARG GLN SEQRES 15 B 188 GLU GLU LYS GLU GLU VAL HET CA B 401 1 HETNAM CA CALCIUM ION FORMUL 3 CA CA 2+ FORMUL 4 HOH *146(H2 O) HELIX 1 1 SER A 154 TYR A 167 1 14 HELIX 2 2 TYR A 167 TYR A 186 1 20 HELIX 3 3 THR A 263 GLN A 273 1 11 HELIX 4 4 TYR A 274 GLY A 278 5 5 HELIX 5 5 SER A 280 ASP A 301 1 22 HELIX 6 6 ALA A 302 ASN A 307 1 6 HELIX 7 7 SER A 324 GLU A 337 1 14 HELIX 8 8 VAL B 155 TYR B 167 1 13 HELIX 9 9 TYR B 167 LEU B 172 1 6 HELIX 10 10 GLU B 174 TYR B 186 1 13 HELIX 11 11 LEU B 212 ASP B 216 5 5 HELIX 12 12 THR B 263 TYR B 274 1 12 HELIX 13 13 SER B 275 GLY B 278 5 4 HELIX 14 14 SER B 280 ASP B 301 1 22 HELIX 15 15 ALA B 302 ASN B 307 1 6 HELIX 16 16 ASP B 319 PHE B 323 5 5 HELIX 17 17 SER B 324 GLN B 335 1 12 SHEET 1 A 5 ILE A 219 LEU A 225 0 SHEET 2 A 5 ASN A 242 GLU A 249 -1 O ILE A 244 N ASP A 223 SHEET 3 A 5 GLN A 252 TYR A 261 -1 O ALA A 254 N LEU A 247 SHEET 4 A 5 LEU A 198 PRO A 203 1 N LEU A 201 O GLU A 260 SHEET 5 A 5 CYS A 309 TYR A 314 1 O ILE A 312 N LEU A 202 SHEET 1 B 5 ILE B 219 LEU B 225 0 SHEET 2 B 5 ASN B 242 GLU B 249 -1 O ILE B 244 N ASP B 223 SHEET 3 B 5 GLN B 252 TYR B 261 -1 O ALA B 254 N LEU B 247 SHEET 4 B 5 LEU B 198 PRO B 203 1 N LEU B 201 O GLU B 260 SHEET 5 B 5 CYS B 309 TYR B 314 1 O ARG B 310 N LEU B 198 LINK O ALA B 318 CA CA B 401 1555 1555 2.39 LINK OD1 ASP B 320 CA CA B 401 1555 1555 2.40 LINK CA CA B 401 O HOH B 502 1555 1555 2.44 LINK CA CA B 401 O HOH B 503 1555 1555 2.39 SITE 1 AC1 6 ASP B 205 GLU B 316 ALA B 318 ASP B 320 SITE 2 AC1 6 HOH B 502 HOH B 503 CRYST1 69.931 78.108 127.768 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014300 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012803 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007827 0.00000