PDB Short entry for 4F5R HEADER TRANSFERASE, LYASE/DNA 13-MAY-12 4F5R TITLE OPEN AND CLOSED TERNARY COMPLEX OF R283K DNA POLYMERASE BETA WITH A TITLE 2 DCTP ANALOG IN THE SAME ASYMMETRIC UNIT COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA POLYMERASE BETA; COMPND 3 CHAIN: A, B; COMPND 4 EC: 2.7.7.7, 4.2.99.-; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: DNA (5'-D(P*GP*TP*CP*GP*G)-3'); COMPND 9 CHAIN: D, C; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*C)-3'); COMPND 13 CHAIN: P, G; COMPND 14 ENGINEERED: YES; COMPND 15 MOL_ID: 4; COMPND 16 MOLECULE: DNA (5'-D(*CP*CP*GP*AP*CP*GP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)- COMPND 17 3'); COMPND 18 CHAIN: T, F; COMPND 19 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: POLB; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: TAP56; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PWL11; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 14 ORGANISM_TAXID: 32630; SOURCE 15 OTHER_DETAILS: POLYDEOXYRIBONUCLEOTIDE FROM IDT; SOURCE 16 MOL_ID: 3; SOURCE 17 SYNTHETIC: YES; SOURCE 18 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 19 ORGANISM_TAXID: 32630; SOURCE 20 OTHER_DETAILS: POLYDEOXYRIBONUCLEOTIDE FROM IDT; SOURCE 21 MOL_ID: 4; SOURCE 22 SYNTHETIC: YES; SOURCE 23 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 24 ORGANISM_TAXID: 32630; SOURCE 25 OTHER_DETAILS: POLYDEOXYRIBONUCLEOTIDE FROM IDT KEYWDS TRANSFERASE, LYASE/DNA, LYASE-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR B.D.FREUDENTHAL,W.A.BEARD,S.H.WILSON REVDAT 3 13-SEP-23 4F5R 1 REMARK SEQADV LINK REVDAT 2 17-JUL-19 4F5R 1 REMARK REVDAT 1 12-DEC-12 4F5R 0 JRNL AUTH B.D.FREUDENTHAL,W.A.BEARD,S.H.WILSON JRNL TITL STRUCTURES OF DNTP INTERMEDIATE STATES DURING DNA POLYMERASE JRNL TITL 2 ACTIVE SITE ASSEMBLY. JRNL REF STRUCTURE V. 20 1829 2012 JRNL REFN ISSN 0969-2126 JRNL PMID 22959623 JRNL DOI 10.1016/J.STR.2012.08.008 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7_650) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 21.36 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 85.8 REMARK 3 NUMBER OF REFLECTIONS : 74621 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.212 REMARK 3 R VALUE (WORKING SET) : 0.210 REMARK 3 FREE R VALUE : 0.278 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.650 REMARK 3 FREE R VALUE TEST SET COUNT : 1393 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 21.3611 - 5.8325 0.99 4406 167 0.1957 0.2319 REMARK 3 2 5.8325 - 4.6451 0.97 4255 159 0.1756 0.2080 REMARK 3 3 4.6451 - 4.0625 0.95 4222 158 0.1474 0.2134 REMARK 3 4 4.0625 - 3.6931 0.96 4200 158 0.1709 0.2190 REMARK 3 5 3.6931 - 3.4296 0.99 4422 167 0.2143 0.2872 REMARK 3 6 3.4296 - 3.2281 0.98 4302 161 0.2152 0.3107 REMARK 3 7 3.2281 - 3.0669 0.94 4189 150 0.2276 0.3185 REMARK 3 8 3.0669 - 2.9338 0.83 3624 140 0.2300 0.3261 REMARK 3 9 2.9338 - 2.8211 0.79 3484 123 0.2422 0.2968 REMARK 3 10 2.8211 - 2.7240 0.77 3467 122 0.2510 0.3311 REMARK 3 11 2.7240 - 2.6389 0.79 3486 131 0.2578 0.3461 REMARK 3 12 2.6389 - 2.5636 0.78 3425 133 0.2616 0.3453 REMARK 3 13 2.5636 - 2.4962 0.77 3353 122 0.2774 0.4073 REMARK 3 14 2.4962 - 2.4354 0.78 3452 124 0.2546 0.3663 REMARK 3 15 2.4354 - 2.3801 0.77 3385 128 0.2558 0.2795 REMARK 3 16 2.3801 - 2.3296 0.82 3677 150 0.2395 0.3133 REMARK 3 17 2.3296 - 2.2830 0.81 3562 142 0.2494 0.3378 REMARK 3 18 2.2830 - 2.2400 0.77 3371 144 0.2572 0.3312 REMARK 3 19 2.2400 - 2.2000 0.83 3615 145 0.2626 0.3502 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 1.01 REMARK 3 K_SOL : 0.39 REMARK 3 B_SOL : 41.65 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.390 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.740 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 31.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -5.89790 REMARK 3 B22 (A**2) : -0.35740 REMARK 3 B33 (A**2) : 6.25530 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.20140 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 6779 REMARK 3 ANGLE : 1.100 9456 REMARK 3 CHIRALITY : 0.062 1028 REMARK 3 PLANARITY : 0.004 979 REMARK 3 DIHEDRAL : 21.512 2621 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4F5R COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-MAY-12. REMARK 100 THE DEPOSITION ID IS D_1000072489. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-JUN-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54178 REMARK 200 MONOCHROMATOR : MIRRORS VARIMAXHF REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU SATURN 92 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 263254 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 5.900 REMARK 200 R MERGE (I) : 0.13600 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.28 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.80 REMARK 200 R MERGE FOR SHELL (I) : 0.70300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.730 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: 3ISB AND 2FMS REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.05 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.32 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50MM IMIDAZOLE, 350MM SODIUM ACETATE, REMARK 280 16.5% PEG3350, PH 8.0, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 39.72300 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4350 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21280 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -47.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D, P, T REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4990 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19890 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -53.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C, G, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 LYS A 3 REMARK 465 ARG A 4 REMARK 465 LYS A 5 REMARK 465 ALA A 6 REMARK 465 PRO A 7 REMARK 465 GLN A 8 REMARK 465 GLU A 9 REMARK 465 LYS A 206 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 LYS B 3 REMARK 465 ARG B 4 REMARK 465 LYS B 5 REMARK 465 ALA B 6 REMARK 465 PRO B 7 REMARK 465 GLN B 8 REMARK 465 GLU B 9 REMARK 465 GLY B 302 REMARK 465 VAL B 303 REMARK 465 THR B 304 REMARK 465 GLY B 305 REMARK 465 VAL B 306 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 203 CG CD OE1 OE2 REMARK 470 GLN A 207 CG CD OE1 NE2 REMARK 470 LYS A 244 CG CD CE NZ REMARK 470 ASN A 245 CG OD1 ND2 REMARK 470 ASP A 246 CG OD1 OD2 REMARK 470 GLU A 247 CG CD OE1 OE2 REMARK 470 LYS B 244 CG CD CE NZ REMARK 470 ASP B 246 CG OD1 OD2 REMARK 470 LYS B 326 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ASN A 245 O HOH A 614 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DG D 1 P DG D 1 OP3 -0.119 REMARK 500 DG C 1 P DG C 1 OP3 -0.122 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DG P 4 O4' - C1' - N9 ANGL. DEV. = -5.0 DEGREES REMARK 500 DA T 4 O4' - C1' - N9 ANGL. DEV. = -4.7 DEGREES REMARK 500 DC T 5 O4' - C1' - N1 ANGL. DEV. = 2.9 DEGREES REMARK 500 DG T 7 C3' - C2' - C1' ANGL. DEV. = -5.8 DEGREES REMARK 500 DG T 7 O4' - C1' - N9 ANGL. DEV. = 3.6 DEGREES REMARK 500 DA T 14 O4' - C1' - N9 ANGL. DEV. = -4.3 DEGREES REMARK 500 DT C 2 O4' - C1' - N1 ANGL. DEV. = -5.1 DEGREES REMARK 500 DG G 9 O4' - C1' - N9 ANGL. DEV. = 2.5 DEGREES REMARK 500 DC F 1 O4' - C1' - N1 ANGL. DEV. = 2.0 DEGREES REMARK 500 DC F 5 O4' - C1' - N1 ANGL. DEV. = 2.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 170 133.92 -171.00 REMARK 500 CYS A 178 -156.91 -110.01 REMARK 500 ASN A 245 -3.08 74.57 REMARK 500 ASP A 246 -46.41 -135.71 REMARK 500 GLU A 247 -163.49 -109.88 REMARK 500 PRO B 50 33.51 -78.04 REMARK 500 CYS B 178 -154.03 -118.78 REMARK 500 LYS B 209 48.04 -107.58 REMARK 500 ASN B 245 -128.65 57.92 REMARK 500 ASN B 294 -166.15 -117.43 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 401 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 101 O REMARK 620 2 VAL A 103 O 88.3 REMARK 620 3 ILE A 106 O 85.8 85.4 REMARK 620 4 HOH A 509 O 83.5 94.8 169.3 REMARK 620 5 DG P 9 OP1 168.6 100.5 102.0 88.4 REMARK 620 6 HOH P 110 O 81.4 168.3 88.3 89.6 90.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 401 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 190 OD2 REMARK 620 2 ASP B 192 OD1 104.2 REMARK 620 3 ASP B 256 OD2 84.5 94.4 REMARK 620 4 6CF B 404 O1A 101.4 89.1 172.2 REMARK 620 5 HOH B 562 O 82.6 169.8 93.9 82.0 REMARK 620 6 DC G 10 O3' 160.5 90.3 81.4 91.7 84.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 402 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 190 OD1 REMARK 620 2 ASP B 192 OD2 98.1 REMARK 620 3 6CF B 404 O2B 176.7 84.3 REMARK 620 4 6CF B 404 O3G 88.7 168.2 89.3 REMARK 620 5 6CF B 404 O1A 94.0 79.8 84.2 109.5 REMARK 620 6 HOH B 618 O 92.3 88.4 90.1 81.7 167.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 403 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 314 OD1 REMARK 620 2 ASP B 318 OD1 142.1 REMARK 620 3 ASP B 318 OD2 112.7 51.8 REMARK 620 4 HOH B 582 O 56.0 148.6 158.8 REMARK 620 5 HOH B 609 O 78.1 81.3 117.5 79.7 REMARK 620 6 HOH B 616 O 95.8 101.3 60.4 100.8 172.4 REMARK 620 7 HOH B 617 O 133.6 66.4 112.3 84.0 71.8 115.8 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN D 101 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DG D 4 N7 REMARK 620 2 HOH D 202 O 85.6 REMARK 620 3 HOH D 208 O 95.3 87.2 REMARK 620 4 HOH D 214 O 158.8 114.6 92.1 REMARK 620 5 HOH D 215 O 92.3 171.7 85.0 68.6 REMARK 620 6 HOH D 216 O 77.5 89.9 172.4 95.5 97.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN T 101 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DG T 3 N7 REMARK 620 2 HOH T 213 O 172.9 REMARK 620 3 HOH T 225 O 94.5 80.8 REMARK 620 4 HOH T 233 O 86.4 87.9 84.9 REMARK 620 5 HOH T 234 O 83.9 101.2 87.9 167.4 REMARK 620 6 HOH T 235 O 94.3 89.7 168.7 88.6 100.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA T 102 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH T 229 O REMARK 620 2 HOH T 236 O 78.5 REMARK 620 3 HOH T 237 O 67.9 144.1 REMARK 620 4 HOH T 238 O 143.0 129.6 77.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA G 101 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH G 210 O REMARK 620 2 HOH G 211 O 102.1 REMARK 620 3 HOH G 212 O 104.3 109.9 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 6CF A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 6CF B 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN D 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN T 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA T 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA G 101 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4F5N RELATED DB: PDB REMARK 900 RELATED ID: 4F5O RELATED DB: PDB REMARK 900 RELATED ID: 4F5P RELATED DB: PDB REMARK 900 RELATED ID: 4F5Q RELATED DB: PDB DBREF 4F5R A 1 335 UNP P06746 DPOLB_HUMAN 1 335 DBREF 4F5R B 1 335 UNP P06746 DPOLB_HUMAN 1 335 DBREF 4F5R D 1 5 PDB 4F5R 4F5R 1 5 DBREF 4F5R C 1 5 PDB 4F5R 4F5R 1 5 DBREF 4F5R P 1 10 PDB 4F5R 4F5R 1 10 DBREF 4F5R G 1 10 PDB 4F5R 4F5R 1 10 DBREF 4F5R T 1 16 PDB 4F5R 4F5R 1 16 DBREF 4F5R F 1 16 PDB 4F5R 4F5R 1 16 SEQADV 4F5R LYS A 283 UNP P06746 ARG 283 ENGINEERED MUTATION SEQADV 4F5R LYS B 283 UNP P06746 ARG 283 ENGINEERED MUTATION SEQRES 1 A 335 MET SER LYS ARG LYS ALA PRO GLN GLU THR LEU ASN GLY SEQRES 2 A 335 GLY ILE THR ASP MET LEU THR GLU LEU ALA ASN PHE GLU SEQRES 3 A 335 LYS ASN VAL SER GLN ALA ILE HIS LYS TYR ASN ALA TYR SEQRES 4 A 335 ARG LYS ALA ALA SER VAL ILE ALA LYS TYR PRO HIS LYS SEQRES 5 A 335 ILE LYS SER GLY ALA GLU ALA LYS LYS LEU PRO GLY VAL SEQRES 6 A 335 GLY THR LYS ILE ALA GLU LYS ILE ASP GLU PHE LEU ALA SEQRES 7 A 335 THR GLY LYS LEU ARG LYS LEU GLU LYS ILE ARG GLN ASP SEQRES 8 A 335 ASP THR SER SER SER ILE ASN PHE LEU THR ARG VAL SER SEQRES 9 A 335 GLY ILE GLY PRO SER ALA ALA ARG LYS PHE VAL ASP GLU SEQRES 10 A 335 GLY ILE LYS THR LEU GLU ASP LEU ARG LYS ASN GLU ASP SEQRES 11 A 335 LYS LEU ASN HIS HIS GLN ARG ILE GLY LEU LYS TYR PHE SEQRES 12 A 335 GLY ASP PHE GLU LYS ARG ILE PRO ARG GLU GLU MET LEU SEQRES 13 A 335 GLN MET GLN ASP ILE VAL LEU ASN GLU VAL LYS LYS VAL SEQRES 14 A 335 ASP SER GLU TYR ILE ALA THR VAL CYS GLY SER PHE ARG SEQRES 15 A 335 ARG GLY ALA GLU SER SER GLY ASP MET ASP VAL LEU LEU SEQRES 16 A 335 THR HIS PRO SER PHE THR SER GLU SER THR LYS GLN PRO SEQRES 17 A 335 LYS LEU LEU HIS GLN VAL VAL GLU GLN LEU GLN LYS VAL SEQRES 18 A 335 HIS PHE ILE THR ASP THR LEU SER LYS GLY GLU THR LYS SEQRES 19 A 335 PHE MET GLY VAL CYS GLN LEU PRO SER LYS ASN ASP GLU SEQRES 20 A 335 LYS GLU TYR PRO HIS ARG ARG ILE ASP ILE ARG LEU ILE SEQRES 21 A 335 PRO LYS ASP GLN TYR TYR CYS GLY VAL LEU TYR PHE THR SEQRES 22 A 335 GLY SER ASP ILE PHE ASN LYS ASN MET LYS ALA HIS ALA SEQRES 23 A 335 LEU GLU LYS GLY PHE THR ILE ASN GLU TYR THR ILE ARG SEQRES 24 A 335 PRO LEU GLY VAL THR GLY VAL ALA GLY GLU PRO LEU PRO SEQRES 25 A 335 VAL ASP SER GLU LYS ASP ILE PHE ASP TYR ILE GLN TRP SEQRES 26 A 335 LYS TYR ARG GLU PRO LYS ASP ARG SER GLU SEQRES 1 B 335 MET SER LYS ARG LYS ALA PRO GLN GLU THR LEU ASN GLY SEQRES 2 B 335 GLY ILE THR ASP MET LEU THR GLU LEU ALA ASN PHE GLU SEQRES 3 B 335 LYS ASN VAL SER GLN ALA ILE HIS LYS TYR ASN ALA TYR SEQRES 4 B 335 ARG LYS ALA ALA SER VAL ILE ALA LYS TYR PRO HIS LYS SEQRES 5 B 335 ILE LYS SER GLY ALA GLU ALA LYS LYS LEU PRO GLY VAL SEQRES 6 B 335 GLY THR LYS ILE ALA GLU LYS ILE ASP GLU PHE LEU ALA SEQRES 7 B 335 THR GLY LYS LEU ARG LYS LEU GLU LYS ILE ARG GLN ASP SEQRES 8 B 335 ASP THR SER SER SER ILE ASN PHE LEU THR ARG VAL SER SEQRES 9 B 335 GLY ILE GLY PRO SER ALA ALA ARG LYS PHE VAL ASP GLU SEQRES 10 B 335 GLY ILE LYS THR LEU GLU ASP LEU ARG LYS ASN GLU ASP SEQRES 11 B 335 LYS LEU ASN HIS HIS GLN ARG ILE GLY LEU LYS TYR PHE SEQRES 12 B 335 GLY ASP PHE GLU LYS ARG ILE PRO ARG GLU GLU MET LEU SEQRES 13 B 335 GLN MET GLN ASP ILE VAL LEU ASN GLU VAL LYS LYS VAL SEQRES 14 B 335 ASP SER GLU TYR ILE ALA THR VAL CYS GLY SER PHE ARG SEQRES 15 B 335 ARG GLY ALA GLU SER SER GLY ASP MET ASP VAL LEU LEU SEQRES 16 B 335 THR HIS PRO SER PHE THR SER GLU SER THR LYS GLN PRO SEQRES 17 B 335 LYS LEU LEU HIS GLN VAL VAL GLU GLN LEU GLN LYS VAL SEQRES 18 B 335 HIS PHE ILE THR ASP THR LEU SER LYS GLY GLU THR LYS SEQRES 19 B 335 PHE MET GLY VAL CYS GLN LEU PRO SER LYS ASN ASP GLU SEQRES 20 B 335 LYS GLU TYR PRO HIS ARG ARG ILE ASP ILE ARG LEU ILE SEQRES 21 B 335 PRO LYS ASP GLN TYR TYR CYS GLY VAL LEU TYR PHE THR SEQRES 22 B 335 GLY SER ASP ILE PHE ASN LYS ASN MET LYS ALA HIS ALA SEQRES 23 B 335 LEU GLU LYS GLY PHE THR ILE ASN GLU TYR THR ILE ARG SEQRES 24 B 335 PRO LEU GLY VAL THR GLY VAL ALA GLY GLU PRO LEU PRO SEQRES 25 B 335 VAL ASP SER GLU LYS ASP ILE PHE ASP TYR ILE GLN TRP SEQRES 26 B 335 LYS TYR ARG GLU PRO LYS ASP ARG SER GLU SEQRES 1 D 5 DG DT DC DG DG SEQRES 1 P 10 DG DC DT DG DA DT DG DC DG DC SEQRES 1 T 16 DC DC DG DA DC DG DG DC DG DC DA DT DC SEQRES 2 T 16 DA DG DC SEQRES 1 C 5 DG DT DC DG DG SEQRES 1 G 10 DG DC DT DG DA DT DG DC DG DC SEQRES 1 F 16 DC DC DG DA DC DG DG DC DG DC DA DT DC SEQRES 2 F 16 DA DG DC HET NA A 401 1 HET 6CF A 402 30 HET MN B 401 1 HET MN B 402 1 HET NA B 403 1 HET 6CF B 404 30 HET MN D 101 1 HET MN T 101 1 HET NA T 102 1 HET NA G 101 1 HETNAM NA SODIUM ION HETNAM 6CF 2'-DEOXY-5'-O-[(S)-{DIFLUORO[(S)-HYDROXY(PHOSPHONOOXY) HETNAM 2 6CF PHOSPHORYL]METHYL}(HYDROXY)PHOSPHORYL]CYTIDINE HETNAM MN MANGANESE (II) ION FORMUL 9 NA 4(NA 1+) FORMUL 10 6CF 2(C10 H16 F2 N3 O12 P3) FORMUL 11 MN 4(MN 2+) FORMUL 19 HOH *414(H2 O) HELIX 1 1 ASN A 12 VAL A 29 1 18 HELIX 2 2 ALA A 32 TYR A 49 1 18 HELIX 3 3 SER A 55 LYS A 61 1 7 HELIX 4 4 GLY A 66 GLY A 80 1 15 HELIX 5 5 LEU A 82 GLN A 90 1 9 HELIX 6 6 ASP A 91 THR A 101 1 11 HELIX 7 7 GLY A 107 GLU A 117 1 11 HELIX 8 8 THR A 121 ASN A 128 1 8 HELIX 9 9 GLU A 129 LEU A 132 5 4 HELIX 10 10 ASN A 133 TYR A 142 1 10 HELIX 11 11 TYR A 142 GLU A 147 1 6 HELIX 12 12 ARG A 152 ASP A 170 1 19 HELIX 13 13 LYS A 209 VAL A 221 1 13 HELIX 14 14 PRO A 261 ASP A 263 5 3 HELIX 15 15 GLN A 264 GLY A 274 1 11 HELIX 16 16 SER A 275 LYS A 289 1 15 HELIX 17 17 SER A 315 ILE A 323 1 9 HELIX 18 18 GLU A 329 ARG A 333 5 5 HELIX 19 19 ASN B 12 VAL B 29 1 18 HELIX 20 20 ALA B 32 LYS B 48 1 17 HELIX 21 21 SER B 55 LYS B 61 1 7 HELIX 22 22 GLY B 66 THR B 79 1 14 HELIX 23 23 LEU B 82 ASP B 91 1 10 HELIX 24 24 ASP B 91 THR B 101 1 11 HELIX 25 25 GLY B 107 GLU B 117 1 11 HELIX 26 26 THR B 121 ASN B 128 1 8 HELIX 27 27 GLU B 129 LEU B 132 5 4 HELIX 28 28 ASN B 133 TYR B 142 1 10 HELIX 29 29 TYR B 142 GLU B 147 1 6 HELIX 30 30 ARG B 152 ASP B 170 1 19 HELIX 31 31 GLY B 179 ARG B 182 5 4 HELIX 32 32 LYS B 209 VAL B 221 1 13 HELIX 33 33 PRO B 261 ASP B 263 5 3 HELIX 34 34 GLN B 264 GLY B 274 1 11 HELIX 35 35 SER B 275 GLU B 288 1 14 HELIX 36 36 SER B 315 GLN B 324 1 10 HELIX 37 37 GLU B 329 SER B 334 5 6 SHEET 1 A 2 ILE A 150 PRO A 151 0 SHEET 2 A 2 SER A 187 SER A 188 -1 O SER A 188 N ILE A 150 SHEET 1 B 5 ILE A 174 CYS A 178 0 SHEET 2 B 5 MET A 191 THR A 196 -1 O LEU A 194 N THR A 176 SHEET 3 B 5 ARG A 253 LEU A 259 1 O ASP A 256 N VAL A 193 SHEET 4 B 5 LYS A 234 CYS A 239 -1 N PHE A 235 O ILE A 257 SHEET 5 B 5 ILE A 224 LYS A 230 -1 N LEU A 228 O MET A 236 SHEET 1 C 2 PHE A 291 ILE A 293 0 SHEET 2 C 2 ILE A 298 PRO A 300 -1 O ARG A 299 N THR A 292 SHEET 1 D 2 ILE B 150 PRO B 151 0 SHEET 2 D 2 SER B 187 SER B 188 -1 O SER B 188 N ILE B 150 SHEET 1 E 5 ILE B 174 CYS B 178 0 SHEET 2 E 5 MET B 191 THR B 196 -1 O LEU B 194 N THR B 176 SHEET 3 E 5 ARG B 253 LEU B 259 1 O ASP B 256 N MET B 191 SHEET 4 E 5 LYS B 234 CYS B 239 -1 N PHE B 235 O ILE B 257 SHEET 5 E 5 ILE B 224 LYS B 230 -1 N SER B 229 O MET B 236 SHEET 1 F 2 PHE B 291 ILE B 293 0 SHEET 2 F 2 ILE B 298 PRO B 300 -1 O ARG B 299 N THR B 292 LINK O THR A 101 NA NA A 401 1555 1555 2.30 LINK O VAL A 103 NA NA A 401 1555 1555 2.41 LINK O ILE A 106 NA NA A 401 1555 1555 2.45 LINK NA NA A 401 O HOH A 509 1555 1555 2.44 LINK NA NA A 401 OP1 DG P 9 1555 1555 2.29 LINK NA NA A 401 O HOH P 110 1555 1555 2.46 LINK OD2 ASP B 190 MN MN B 401 1555 1555 2.15 LINK OD1 ASP B 190 MN MN B 402 1555 1555 1.98 LINK OD1 ASP B 192 MN MN B 401 1555 1555 2.08 LINK OD2 ASP B 192 MN MN B 402 1555 1555 2.14 LINK OD2 ASP B 256 MN MN B 401 1555 1555 2.05 LINK OD1 ASP B 314 NA NA B 403 1555 1555 3.05 LINK OD1 ASP B 318 NA NA B 403 1555 1555 2.42 LINK OD2 ASP B 318 NA NA B 403 1555 1555 2.59 LINK MN MN B 401 O1A 6CF B 404 1555 1555 2.21 LINK MN MN B 401 O HOH B 562 1555 1555 2.16 LINK MN MN B 401 O3' DC G 10 1555 1555 2.30 LINK MN MN B 402 O2B 6CF B 404 1555 1555 1.97 LINK MN MN B 402 O3G 6CF B 404 1555 1555 2.13 LINK MN MN B 402 O1A 6CF B 404 1555 1555 2.21 LINK MN MN B 402 O HOH B 618 1555 1555 2.18 LINK NA NA B 403 O HOH B 582 1555 1555 2.23 LINK NA NA B 403 O HOH B 609 1555 1555 2.52 LINK NA NA B 403 O HOH B 616 1555 1555 2.26 LINK NA NA B 403 O HOH B 617 1555 1555 2.47 LINK N7 DG D 4 MN MN D 101 1555 1555 2.26 LINK MN MN D 101 O HOH D 202 1555 1555 2.19 LINK MN MN D 101 O HOH D 208 1555 1555 2.21 LINK MN MN D 101 O HOH D 214 1555 1555 2.22 LINK MN MN D 101 O HOH D 215 1555 1555 2.23 LINK MN MN D 101 O HOH D 216 1555 1555 2.20 LINK N7 DG T 3 MN MN T 101 1555 1555 2.49 LINK MN MN T 101 O HOH T 213 1555 1555 2.24 LINK MN MN T 101 O HOH T 225 1555 1555 2.27 LINK MN MN T 101 O HOH T 233 1555 1555 2.23 LINK MN MN T 101 O HOH T 234 1555 1555 2.20 LINK MN MN T 101 O HOH T 235 1555 1555 2.21 LINK NA NA T 102 O HOH T 229 1555 1555 2.31 LINK NA NA T 102 O HOH T 236 1555 1555 2.24 LINK NA NA T 102 O HOH T 237 1555 1555 2.33 LINK NA NA T 102 O HOH T 238 1555 1555 2.41 LINK NA NA G 101 O HOH G 210 1555 1555 2.34 LINK NA NA G 101 O HOH G 211 1555 1555 2.39 LINK NA NA G 101 O HOH G 212 1555 1555 2.20 CISPEP 1 GLY A 274 SER A 275 0 0.56 CISPEP 2 GLY B 274 SER B 275 0 -1.39 SITE 1 AC1 6 THR A 101 VAL A 103 ILE A 106 HOH A 509 SITE 2 AC1 6 DG P 9 HOH P 110 SITE 1 AC2 19 ARG A 149 GLY A 179 SER A 180 ARG A 183 SITE 2 AC2 19 SER A 188 GLY A 189 TYR A 271 PHE A 272 SITE 3 AC2 19 GLY A 274 ASP A 276 ASN A 279 HOH A 545 SITE 4 AC2 19 HOH A 585 HOH A 621 HOH A 624 HOH A 679 SITE 5 AC2 19 HOH A 680 DC P 10 DG T 6 SITE 1 AC3 7 ASP B 190 ASP B 192 ASP B 256 MN B 402 SITE 2 AC3 7 6CF B 404 HOH B 562 DC G 10 SITE 1 AC4 5 ASP B 190 ASP B 192 MN B 401 6CF B 404 SITE 2 AC4 5 HOH B 618 SITE 1 AC5 6 ASP B 314 ASP B 318 HOH B 582 HOH B 609 SITE 2 AC5 6 HOH B 616 HOH B 617 SITE 1 AC6 21 ARG B 149 GLY B 179 SER B 180 ARG B 183 SITE 2 AC6 21 SER B 188 GLY B 189 ASP B 190 ASP B 192 SITE 3 AC6 21 TYR B 271 PHE B 272 THR B 273 GLY B 274 SITE 4 AC6 21 ASP B 276 ASN B 279 MN B 401 MN B 402 SITE 5 AC6 21 HOH B 514 HOH B 562 HOH B 618 DG F 6 SITE 6 AC6 21 DC G 10 SITE 1 AC7 6 DG D 4 HOH D 202 HOH D 208 HOH D 214 SITE 2 AC7 6 HOH D 215 HOH D 216 SITE 1 AC8 6 DG T 3 HOH T 213 HOH T 225 HOH T 233 SITE 2 AC8 6 HOH T 234 HOH T 235 SITE 1 AC9 4 HOH T 229 HOH T 236 HOH T 237 HOH T 238 SITE 1 BC1 4 DG G 4 HOH G 210 HOH G 211 HOH G 212 CRYST1 55.028 79.446 102.090 90.00 96.96 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018173 0.000000 0.002217 0.00000 SCALE2 0.000000 0.012587 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009868 0.00000