PDB Short entry for 4GCK HEADER DNA BINDING PROTEIN/DNA 30-JUL-12 4GCK TITLE STRUCTURE OF NO-DNA COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: NUCLEOID OCCLUSION FACTOR SLMA; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: DNA (5'-D(*GP*TP*GP*AP*GP*TP*AP*CP*TP*CP*AP*C)-3'); COMPND 7 CHAIN: W, Z; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: KLEBSIELLA PNEUMONIAE; SOURCE 3 ORGANISM_TAXID: 507522; SOURCE 4 STRAIN: 342; SOURCE 5 GENE: SLMA, KPK_0113; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES KEYWDS NO, DNA BINDING, DNA BINDING PROTEIN-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR M.A.SCHUMACHER REVDAT 3 28-FEB-24 4GCK 1 SEQADV REVDAT 2 10-JUL-13 4GCK 1 JRNL REVDAT 1 19-JUN-13 4GCK 0 JRNL AUTH N.K.TONTHAT,S.L.MILAM,N.CHINNAM,T.WHITFILL,W.MARGOLIN, JRNL AUTH 2 M.A.SCHUMACHER JRNL TITL SLMA FORMS A HIGHER-ORDER STRUCTURE ON DNA THAT INHIBITS JRNL TITL 2 CYTOKINETIC Z-RING FORMATION OVER THE NUCLEOID. JRNL REF PROC.NATL.ACAD.SCI.USA V. 110 10586 2013 JRNL REFN ISSN 0027-8424 JRNL PMID 23754405 JRNL DOI 10.1073/PNAS.1221036110 REMARK 2 REMARK 2 RESOLUTION. 2.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.2 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 74.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 2784819.540 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 94.8 REMARK 3 NUMBER OF REFLECTIONS : 70239 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.218 REMARK 3 FREE R VALUE : 0.243 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 7056 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.003 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.05 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.18 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 93.80 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 10228 REMARK 3 BIN R VALUE (WORKING SET) : 0.3490 REMARK 3 BIN FREE R VALUE : 0.3710 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 10.40 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 1189 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.011 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6154 REMARK 3 NUCLEIC ACID ATOMS : 486 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 448 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 23.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.30 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -6.49000 REMARK 3 B22 (A**2) : 18.51000 REMARK 3 B33 (A**2) : -12.02000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.26 REMARK 3 ESD FROM SIGMAA (A) : 0.40 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.30 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.45 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.011 REMARK 3 BOND ANGLES (DEGREES) : 1.400 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 19.90 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.040 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 3.070 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 4.040 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 5.330 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 7.050 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.40 REMARK 3 BSOL : 59.23 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : DNA-RNA_REP.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : ION.TOP REMARK 3 TOPOLOGY FILE 4 : DNA-RNA.TOP REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: BULK SOLVENT MODEL USED REMARK 4 REMARK 4 4GCK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-AUG-12. REMARK 100 THE DEPOSITION ID IS D_1000074013. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-APR-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.3.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.03 REMARK 200 MONOCHROMATOR : MIRRORS REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 70400 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.050 REMARK 200 RESOLUTION RANGE LOW (A) : 74.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.61 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.77 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 200 MM PHOSPHATE, PH 6.5, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 35.74500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 100.65000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 40.37500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 100.65000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 35.74500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 40.37500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10760 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 33700 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -51.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, W, Z REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -13 REMARK 465 PRO A -12 REMARK 465 PRO A -11 REMARK 465 GLY A -10 REMARK 465 LYS A -9 REMARK 465 CYS A -8 REMARK 465 LEU A -7 REMARK 465 PHE A -6 REMARK 465 SER A -5 REMARK 465 GLY A -4 REMARK 465 VAL A -3 REMARK 465 PHE A -2 REMARK 465 CYS A -1 REMARK 465 ASN A 0 REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 GLU A 3 REMARK 465 LYS A 4 REMARK 465 GLN A 5 REMARK 465 THR A 6 REMARK 465 ALA A 7 REMARK 465 LYS A 8 REMARK 465 MET B -13 REMARK 465 PRO B -12 REMARK 465 PRO B -11 REMARK 465 GLY B -10 REMARK 465 LYS B -9 REMARK 465 CYS B -8 REMARK 465 LEU B -7 REMARK 465 PHE B -6 REMARK 465 SER B -5 REMARK 465 GLY B -4 REMARK 465 VAL B -3 REMARK 465 PHE B -2 REMARK 465 CYS B -1 REMARK 465 ASN B 0 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 GLU B 3 REMARK 465 LYS B 4 REMARK 465 GLN B 5 REMARK 465 THR B 6 REMARK 465 ALA B 7 REMARK 465 LYS B 8 REMARK 465 ARG B 9 REMARK 465 MET C -13 REMARK 465 PRO C -12 REMARK 465 PRO C -11 REMARK 465 GLY C -10 REMARK 465 LYS C -9 REMARK 465 CYS C -8 REMARK 465 LEU C -7 REMARK 465 PHE C -6 REMARK 465 SER C -5 REMARK 465 GLY C -4 REMARK 465 VAL C -3 REMARK 465 PHE C -2 REMARK 465 CYS C -1 REMARK 465 ASN C 0 REMARK 465 MET C 1 REMARK 465 ALA C 2 REMARK 465 GLU C 3 REMARK 465 LYS C 4 REMARK 465 GLN C 5 REMARK 465 THR C 6 REMARK 465 ALA C 7 REMARK 465 LYS C 8 REMARK 465 MET D -13 REMARK 465 PRO D -12 REMARK 465 PRO D -11 REMARK 465 GLY D -10 REMARK 465 LYS D -9 REMARK 465 CYS D -8 REMARK 465 LEU D -7 REMARK 465 PHE D -6 REMARK 465 SER D -5 REMARK 465 GLY D -4 REMARK 465 VAL D -3 REMARK 465 PHE D -2 REMARK 465 CYS D -1 REMARK 465 ASN D 0 REMARK 465 MET D 1 REMARK 465 ALA D 2 REMARK 465 GLU D 3 REMARK 465 LYS D 4 REMARK 465 GLN D 5 REMARK 465 THR D 6 REMARK 465 ALA D 7 REMARK 465 LYS D 8 REMARK 465 ARG D 9 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU C 147 O HOH C 312 1.99 REMARK 500 OE1 GLU C 67 O HOH C 314 2.03 REMARK 500 NH1 ARG C 12 O HOH C 275 2.03 REMARK 500 OE2 GLU B 117 O HOH B 267 2.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NH2 ARG C 146 OE2 GLU D 187 4555 2.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP C 80 CB - CG - OD1 ANGL. DEV. = 7.8 DEGREES REMARK 500 DG Z 27 C5' - C4' - O4' ANGL. DEV. = 7.4 DEGREES REMARK 500 DA Z 33 O3' - P - OP2 ANGL. DEV. = 7.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL D 41 -73.71 -54.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 DG W 2 0.06 SIDE CHAIN REMARK 500 DG Z 23 0.06 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3NXC RELATED DB: PDB REMARK 900 SLMA, E. COLI, APO REMARK 900 RELATED ID: 4GCL RELATED DB: PDB REMARK 900 RELATED ID: 4GCT RELATED DB: PDB REMARK 900 RELATED ID: 4GCU RELATED DB: PDB REMARK 900 RELATED ID: 4GFK RELATED DB: PDB REMARK 900 RELATED ID: 4GFL RELATED DB: PDB DBREF 4GCK A 1 198 UNP B5XTG2 SLMA_KLEP3 1 198 DBREF 4GCK B 1 198 UNP B5XTG2 SLMA_KLEP3 1 198 DBREF 4GCK C 1 198 UNP B5XTG2 SLMA_KLEP3 1 198 DBREF 4GCK D 1 198 UNP B5XTG2 SLMA_KLEP3 1 198 DBREF 4GCK W 2 13 PDB 4GCK 4GCK 2 13 DBREF 4GCK Z 23 34 PDB 4GCK 4GCK 23 34 SEQADV 4GCK MET A -13 UNP B5XTG2 EXPRESSION TAG SEQADV 4GCK PRO A -12 UNP B5XTG2 EXPRESSION TAG SEQADV 4GCK PRO A -11 UNP B5XTG2 EXPRESSION TAG SEQADV 4GCK GLY A -10 UNP B5XTG2 EXPRESSION TAG SEQADV 4GCK LYS A -9 UNP B5XTG2 EXPRESSION TAG SEQADV 4GCK CYS A -8 UNP B5XTG2 EXPRESSION TAG SEQADV 4GCK LEU A -7 UNP B5XTG2 EXPRESSION TAG SEQADV 4GCK PHE A -6 UNP B5XTG2 EXPRESSION TAG SEQADV 4GCK SER A -5 UNP B5XTG2 EXPRESSION TAG SEQADV 4GCK GLY A -4 UNP B5XTG2 EXPRESSION TAG SEQADV 4GCK VAL A -3 UNP B5XTG2 EXPRESSION TAG SEQADV 4GCK PHE A -2 UNP B5XTG2 EXPRESSION TAG SEQADV 4GCK CYS A -1 UNP B5XTG2 EXPRESSION TAG SEQADV 4GCK ASN A 0 UNP B5XTG2 EXPRESSION TAG SEQADV 4GCK MET B -13 UNP B5XTG2 EXPRESSION TAG SEQADV 4GCK PRO B -12 UNP B5XTG2 EXPRESSION TAG SEQADV 4GCK PRO B -11 UNP B5XTG2 EXPRESSION TAG SEQADV 4GCK GLY B -10 UNP B5XTG2 EXPRESSION TAG SEQADV 4GCK LYS B -9 UNP B5XTG2 EXPRESSION TAG SEQADV 4GCK CYS B -8 UNP B5XTG2 EXPRESSION TAG SEQADV 4GCK LEU B -7 UNP B5XTG2 EXPRESSION TAG SEQADV 4GCK PHE B -6 UNP B5XTG2 EXPRESSION TAG SEQADV 4GCK SER B -5 UNP B5XTG2 EXPRESSION TAG SEQADV 4GCK GLY B -4 UNP B5XTG2 EXPRESSION TAG SEQADV 4GCK VAL B -3 UNP B5XTG2 EXPRESSION TAG SEQADV 4GCK PHE B -2 UNP B5XTG2 EXPRESSION TAG SEQADV 4GCK CYS B -1 UNP B5XTG2 EXPRESSION TAG SEQADV 4GCK ASN B 0 UNP B5XTG2 EXPRESSION TAG SEQADV 4GCK MET C -13 UNP B5XTG2 EXPRESSION TAG SEQADV 4GCK PRO C -12 UNP B5XTG2 EXPRESSION TAG SEQADV 4GCK PRO C -11 UNP B5XTG2 EXPRESSION TAG SEQADV 4GCK GLY C -10 UNP B5XTG2 EXPRESSION TAG SEQADV 4GCK LYS C -9 UNP B5XTG2 EXPRESSION TAG SEQADV 4GCK CYS C -8 UNP B5XTG2 EXPRESSION TAG SEQADV 4GCK LEU C -7 UNP B5XTG2 EXPRESSION TAG SEQADV 4GCK PHE C -6 UNP B5XTG2 EXPRESSION TAG SEQADV 4GCK SER C -5 UNP B5XTG2 EXPRESSION TAG SEQADV 4GCK GLY C -4 UNP B5XTG2 EXPRESSION TAG SEQADV 4GCK VAL C -3 UNP B5XTG2 EXPRESSION TAG SEQADV 4GCK PHE C -2 UNP B5XTG2 EXPRESSION TAG SEQADV 4GCK CYS C -1 UNP B5XTG2 EXPRESSION TAG SEQADV 4GCK ASN C 0 UNP B5XTG2 EXPRESSION TAG SEQADV 4GCK MET D -13 UNP B5XTG2 EXPRESSION TAG SEQADV 4GCK PRO D -12 UNP B5XTG2 EXPRESSION TAG SEQADV 4GCK PRO D -11 UNP B5XTG2 EXPRESSION TAG SEQADV 4GCK GLY D -10 UNP B5XTG2 EXPRESSION TAG SEQADV 4GCK LYS D -9 UNP B5XTG2 EXPRESSION TAG SEQADV 4GCK CYS D -8 UNP B5XTG2 EXPRESSION TAG SEQADV 4GCK LEU D -7 UNP B5XTG2 EXPRESSION TAG SEQADV 4GCK PHE D -6 UNP B5XTG2 EXPRESSION TAG SEQADV 4GCK SER D -5 UNP B5XTG2 EXPRESSION TAG SEQADV 4GCK GLY D -4 UNP B5XTG2 EXPRESSION TAG SEQADV 4GCK VAL D -3 UNP B5XTG2 EXPRESSION TAG SEQADV 4GCK PHE D -2 UNP B5XTG2 EXPRESSION TAG SEQADV 4GCK CYS D -1 UNP B5XTG2 EXPRESSION TAG SEQADV 4GCK ASN D 0 UNP B5XTG2 EXPRESSION TAG SEQRES 1 A 212 MET PRO PRO GLY LYS CYS LEU PHE SER GLY VAL PHE CYS SEQRES 2 A 212 ASN MET ALA GLU LYS GLN THR ALA LYS ARG ASN ARG ARG SEQRES 3 A 212 GLU GLU ILE LEU GLN SER LEU ALA LEU MET LEU GLU SER SEQRES 4 A 212 SER ASP GLY SER GLN ARG ILE THR THR ALA LYS LEU ALA SEQRES 5 A 212 ALA SER VAL GLY VAL SER GLU ALA ALA LEU TYR ARG HIS SEQRES 6 A 212 PHE PRO SER LYS THR ARG MET PHE ASP SER LEU ILE GLU SEQRES 7 A 212 PHE ILE GLU ASP SER LEU ILE THR ARG ILE ASN LEU ILE SEQRES 8 A 212 LEU LYS ASP GLU LYS ASP THR THR ALA ARG LEU ARG LEU SEQRES 9 A 212 ILE VAL LEU LEU ILE LEU GLY PHE GLY GLU ARG ASN PRO SEQRES 10 A 212 GLY LEU THR ARG ILE LEU THR GLY HIS ALA LEU MET PHE SEQRES 11 A 212 GLU GLN ASP ARG LEU GLN GLY ARG ILE ASN GLN LEU PHE SEQRES 12 A 212 GLU ARG ILE GLU VAL GLN LEU ARG GLN VAL MET ARG GLU SEQRES 13 A 212 LYS LYS MET ARG GLU GLY GLU GLY TYR THR LEU ASP GLU SEQRES 14 A 212 THR LEU LEU ALA SER GLN LEU LEU ALA PHE CYS GLU GLY SEQRES 15 A 212 MET LEU SER ARG PHE VAL ARG SER GLU PHE LYS TYR ARG SEQRES 16 A 212 PRO THR ASP ASP PHE GLU ALA ARG TRP PRO LEU VAL ALA SEQRES 17 A 212 ALA GLN LEU GLN SEQRES 1 B 212 MET PRO PRO GLY LYS CYS LEU PHE SER GLY VAL PHE CYS SEQRES 2 B 212 ASN MET ALA GLU LYS GLN THR ALA LYS ARG ASN ARG ARG SEQRES 3 B 212 GLU GLU ILE LEU GLN SER LEU ALA LEU MET LEU GLU SER SEQRES 4 B 212 SER ASP GLY SER GLN ARG ILE THR THR ALA LYS LEU ALA SEQRES 5 B 212 ALA SER VAL GLY VAL SER GLU ALA ALA LEU TYR ARG HIS SEQRES 6 B 212 PHE PRO SER LYS THR ARG MET PHE ASP SER LEU ILE GLU SEQRES 7 B 212 PHE ILE GLU ASP SER LEU ILE THR ARG ILE ASN LEU ILE SEQRES 8 B 212 LEU LYS ASP GLU LYS ASP THR THR ALA ARG LEU ARG LEU SEQRES 9 B 212 ILE VAL LEU LEU ILE LEU GLY PHE GLY GLU ARG ASN PRO SEQRES 10 B 212 GLY LEU THR ARG ILE LEU THR GLY HIS ALA LEU MET PHE SEQRES 11 B 212 GLU GLN ASP ARG LEU GLN GLY ARG ILE ASN GLN LEU PHE SEQRES 12 B 212 GLU ARG ILE GLU VAL GLN LEU ARG GLN VAL MET ARG GLU SEQRES 13 B 212 LYS LYS MET ARG GLU GLY GLU GLY TYR THR LEU ASP GLU SEQRES 14 B 212 THR LEU LEU ALA SER GLN LEU LEU ALA PHE CYS GLU GLY SEQRES 15 B 212 MET LEU SER ARG PHE VAL ARG SER GLU PHE LYS TYR ARG SEQRES 16 B 212 PRO THR ASP ASP PHE GLU ALA ARG TRP PRO LEU VAL ALA SEQRES 17 B 212 ALA GLN LEU GLN SEQRES 1 C 212 MET PRO PRO GLY LYS CYS LEU PHE SER GLY VAL PHE CYS SEQRES 2 C 212 ASN MET ALA GLU LYS GLN THR ALA LYS ARG ASN ARG ARG SEQRES 3 C 212 GLU GLU ILE LEU GLN SER LEU ALA LEU MET LEU GLU SER SEQRES 4 C 212 SER ASP GLY SER GLN ARG ILE THR THR ALA LYS LEU ALA SEQRES 5 C 212 ALA SER VAL GLY VAL SER GLU ALA ALA LEU TYR ARG HIS SEQRES 6 C 212 PHE PRO SER LYS THR ARG MET PHE ASP SER LEU ILE GLU SEQRES 7 C 212 PHE ILE GLU ASP SER LEU ILE THR ARG ILE ASN LEU ILE SEQRES 8 C 212 LEU LYS ASP GLU LYS ASP THR THR ALA ARG LEU ARG LEU SEQRES 9 C 212 ILE VAL LEU LEU ILE LEU GLY PHE GLY GLU ARG ASN PRO SEQRES 10 C 212 GLY LEU THR ARG ILE LEU THR GLY HIS ALA LEU MET PHE SEQRES 11 C 212 GLU GLN ASP ARG LEU GLN GLY ARG ILE ASN GLN LEU PHE SEQRES 12 C 212 GLU ARG ILE GLU VAL GLN LEU ARG GLN VAL MET ARG GLU SEQRES 13 C 212 LYS LYS MET ARG GLU GLY GLU GLY TYR THR LEU ASP GLU SEQRES 14 C 212 THR LEU LEU ALA SER GLN LEU LEU ALA PHE CYS GLU GLY SEQRES 15 C 212 MET LEU SER ARG PHE VAL ARG SER GLU PHE LYS TYR ARG SEQRES 16 C 212 PRO THR ASP ASP PHE GLU ALA ARG TRP PRO LEU VAL ALA SEQRES 17 C 212 ALA GLN LEU GLN SEQRES 1 D 212 MET PRO PRO GLY LYS CYS LEU PHE SER GLY VAL PHE CYS SEQRES 2 D 212 ASN MET ALA GLU LYS GLN THR ALA LYS ARG ASN ARG ARG SEQRES 3 D 212 GLU GLU ILE LEU GLN SER LEU ALA LEU MET LEU GLU SER SEQRES 4 D 212 SER ASP GLY SER GLN ARG ILE THR THR ALA LYS LEU ALA SEQRES 5 D 212 ALA SER VAL GLY VAL SER GLU ALA ALA LEU TYR ARG HIS SEQRES 6 D 212 PHE PRO SER LYS THR ARG MET PHE ASP SER LEU ILE GLU SEQRES 7 D 212 PHE ILE GLU ASP SER LEU ILE THR ARG ILE ASN LEU ILE SEQRES 8 D 212 LEU LYS ASP GLU LYS ASP THR THR ALA ARG LEU ARG LEU SEQRES 9 D 212 ILE VAL LEU LEU ILE LEU GLY PHE GLY GLU ARG ASN PRO SEQRES 10 D 212 GLY LEU THR ARG ILE LEU THR GLY HIS ALA LEU MET PHE SEQRES 11 D 212 GLU GLN ASP ARG LEU GLN GLY ARG ILE ASN GLN LEU PHE SEQRES 12 D 212 GLU ARG ILE GLU VAL GLN LEU ARG GLN VAL MET ARG GLU SEQRES 13 D 212 LYS LYS MET ARG GLU GLY GLU GLY TYR THR LEU ASP GLU SEQRES 14 D 212 THR LEU LEU ALA SER GLN LEU LEU ALA PHE CYS GLU GLY SEQRES 15 D 212 MET LEU SER ARG PHE VAL ARG SER GLU PHE LYS TYR ARG SEQRES 16 D 212 PRO THR ASP ASP PHE GLU ALA ARG TRP PRO LEU VAL ALA SEQRES 17 D 212 ALA GLN LEU GLN SEQRES 1 W 12 DG DT DG DA DG DT DA DC DT DC DA DC SEQRES 1 Z 12 DG DT DG DA DG DT DA DC DT DC DA DC FORMUL 7 HOH *448(H2 O) HELIX 1 1 ARG A 9 SER A 25 1 17 HELIX 2 2 SER A 26 GLN A 30 5 5 HELIX 3 3 THR A 33 GLY A 42 1 10 HELIX 4 4 SER A 44 PHE A 52 1 9 HELIX 5 5 SER A 54 GLU A 81 1 28 HELIX 6 6 ASP A 83 ASN A 102 1 20 HELIX 7 7 ASN A 102 THR A 110 1 9 HELIX 8 8 HIS A 112 GLU A 117 5 6 HELIX 9 9 GLN A 118 GLY A 148 1 31 HELIX 10 10 ASP A 154 SER A 176 1 23 HELIX 11 11 ASP A 185 ALA A 195 1 11 HELIX 12 12 ARG B 11 SER B 25 1 15 HELIX 13 13 SER B 26 GLN B 30 5 5 HELIX 14 14 THR B 33 GLY B 42 1 10 HELIX 15 15 SER B 44 TYR B 49 1 6 HELIX 16 16 SER B 54 GLU B 81 1 28 HELIX 17 17 ASP B 83 ASN B 102 1 20 HELIX 18 18 ASN B 102 THR B 110 1 9 HELIX 19 19 HIS B 112 GLN B 118 5 7 HELIX 20 20 ASP B 119 GLU B 142 1 24 HELIX 21 21 GLU B 142 GLY B 148 1 7 HELIX 22 22 ASP B 154 SER B 176 1 23 HELIX 23 23 ASP B 185 GLN B 196 1 12 HELIX 24 24 ASN C 10 SER C 25 1 16 HELIX 25 25 SER C 26 GLN C 30 5 5 HELIX 26 26 THR C 33 GLY C 42 1 10 HELIX 27 27 SER C 44 ARG C 50 1 7 HELIX 28 28 SER C 54 GLU C 81 1 28 HELIX 29 29 ASP C 83 ASN C 102 1 20 HELIX 30 30 ASN C 102 THR C 110 1 9 HELIX 31 31 HIS C 112 GLU C 117 5 6 HELIX 32 32 GLN C 118 GLY C 148 1 31 HELIX 33 33 ASP C 154 SER C 176 1 23 HELIX 34 34 ASP C 185 ALA C 195 1 11 HELIX 35 35 ARG D 11 SER D 25 1 15 HELIX 36 36 THR D 33 GLY D 42 1 10 HELIX 37 37 SER D 44 TYR D 49 1 6 HELIX 38 38 SER D 54 GLU D 81 1 28 HELIX 39 39 ASP D 83 ASN D 102 1 20 HELIX 40 40 ASN D 102 THR D 110 1 9 HELIX 41 41 HIS D 112 GLN D 118 5 7 HELIX 42 42 ASP D 119 GLU D 142 1 24 HELIX 43 43 GLU D 142 GLY D 148 1 7 HELIX 44 44 ASP D 154 SER D 176 1 23 HELIX 45 45 ASP D 185 ALA D 195 1 11 CRYST1 71.490 80.750 201.300 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013988 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012384 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004968 0.00000