PDB Short entry for 4GLP HEADER IMMUNE SYSTEM 14-AUG-12 4GLP TITLE THE CRYSTAL STRUCTURE OF SOLUBLE HUMAN CD14 REVEALS A BENT SOLENOID TITLE 2 WITH A HYDROPHOBIC AMINO-TERMINAL POCKET. COMPND MOL_ID: 1; COMPND 2 MOLECULE: MONOCYTE DIFFERENTIATION ANTIGEN CD14; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 26-335; COMPND 5 SYNONYM: MYELOID CELL-SPECIFIC LEUCINE-RICH GLYCOPROTEIN, MONOCYTE COMPND 6 DIFFERENTIATION ANTIGEN CD14, URINARY FORM, MONOCYTE DIFFERENTIATION COMPND 7 ANTIGEN CD14, MEMBRANE-BOUND FORM; COMPND 8 ENGINEERED: YES; COMPND 9 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CD14; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 9 EXPRESSION_SYSTEM_CELL_LINE: HEK 293F; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PDISPLAY KEYWDS ALPHA BETA BENT SOLENOID, LRR, LIPOPOLYSACCHARIDE, SERUM, CD14, KEYWDS 2 LEUCINE-RICH REPEAT, PATTERN RECOGNITION, ENDOTOXIN, SEPSIS, IMMUNE KEYWDS 3 SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR S.L.KELLEY,T.LUKK,S.K.NAIR,R.I.TAPPING REVDAT 5 26-MAY-21 4GLP 1 SOURCE SEQADV REVDAT 4 15-NOV-17 4GLP 1 REMARK REVDAT 3 06-FEB-13 4GLP 1 JRNL REVDAT 2 16-JAN-13 4GLP 1 JRNL REVDAT 1 26-DEC-12 4GLP 0 JRNL AUTH S.L.KELLEY,T.LUKK,S.K.NAIR,R.I.TAPPING JRNL TITL THE CRYSTAL STRUCTURE OF HUMAN SOLUBLE CD14 REVEALS A BENT JRNL TITL 2 SOLENOID WITH A HYDROPHOBIC AMINO-TERMINAL POCKET. JRNL REF J.IMMUNOL. V. 190 1304 2013 JRNL REFN ISSN 0022-1767 JRNL PMID 23264655 JRNL DOI 10.4049/JIMMUNOL.1202446 REMARK 2 REMARK 2 RESOLUTION. 4.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 4.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.88 REMARK 3 DATA CUTOFF (SIGMA(F)) : 41.090 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 4768 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : 0.285 REMARK 3 R VALUE (WORKING SET) : 0.283 REMARK 3 FREE R VALUE : 0.321 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.530 REMARK 3 FREE R VALUE TEST SET COUNT : 216 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 2 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 4.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 5.04 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2240 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2587 REMARK 3 BIN FREE R VALUE SET COUNT : 104 REMARK 3 BIN FREE R VALUE : 0.2800 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2346 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 151.7 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 54.57 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.05950 REMARK 3 B22 (A**2) : -0.05950 REMARK 3 B33 (A**2) : -7.64590 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): NULL REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.430 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : NULL REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): NULL ; NULL ; NULL REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): NULL ; NULL ; NULL REMARK 3 GENERAL PLANES REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 26 A 45 REMARK 3 ORIGIN FOR THE GROUP (A): 41.2597 51.9279 -12.4634 REMARK 3 T TENSOR REMARK 3 T11: 0.4113 T22: 0.1828 REMARK 3 T33: 0.2636 T12: 0.1906 REMARK 3 T13: -0.2414 T23: 0.1939 REMARK 3 L TENSOR REMARK 3 L11: 0.0455 L22: 0.0536 REMARK 3 L33: 0.0244 L12: -0.0222 REMARK 3 L13: -0.0167 L23: 0.0285 REMARK 3 S TENSOR REMARK 3 S11: -0.0309 S12: -0.0283 S13: -0.0304 REMARK 3 S21: 0.0141 S22: 0.0601 S23: 0.0627 REMARK 3 S31: -0.0443 S32: -0.0401 S33: -0.1029 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 46 A 81 REMARK 3 ORIGIN FOR THE GROUP (A): 45.8820 57.6113 -2.7210 REMARK 3 T TENSOR REMARK 3 T11: 0.2221 T22: 0.1499 REMARK 3 T33: 0.2451 T12: 0.8298 REMARK 3 T13: -0.4778 T23: 0.3523 REMARK 3 L TENSOR REMARK 3 L11: 0.0561 L22: 0.0829 REMARK 3 L33: -0.0095 L12: -0.0319 REMARK 3 L13: 0.0214 L23: -0.0147 REMARK 3 S TENSOR REMARK 3 S11: 0.0247 S12: -0.1954 S13: 0.1215 REMARK 3 S21: 0.1003 S22: 0.0472 S23: 0.1889 REMARK 3 S31: -0.1323 S32: -0.0514 S33: 0.0426 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 82 A 102 REMARK 3 ORIGIN FOR THE GROUP (A): 42.5303 52.1970 1.9557 REMARK 3 T TENSOR REMARK 3 T11: 0.1116 T22: -0.1053 REMARK 3 T33: 0.2931 T12: 0.1178 REMARK 3 T13: -0.3662 T23: 0.4972 REMARK 3 L TENSOR REMARK 3 L11: 0.1214 L22: 0.1661 REMARK 3 L33: 0.2007 L12: -0.1518 REMARK 3 L13: 0.1575 L23: -0.1891 REMARK 3 S TENSOR REMARK 3 S11: -0.0204 S12: -0.0894 S13: 0.0574 REMARK 3 S21: 0.0536 S22: 0.0788 S23: 0.1619 REMARK 3 S31: -0.0730 S32: -0.1271 S33: -0.1035 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 103 A 181 REMARK 3 ORIGIN FOR THE GROUP (A): 53.5655 46.6071 5.8502 REMARK 3 T TENSOR REMARK 3 T11: -1.1735 T22: -0.3090 REMARK 3 T33: -0.5987 T12: 0.2080 REMARK 3 T13: -0.3300 T23: 0.7600 REMARK 3 L TENSOR REMARK 3 L11: 0.0069 L22: 0.0136 REMARK 3 L33: 0.0073 L12: 0.0029 REMARK 3 L13: 0.0282 L23: 0.0199 REMARK 3 S TENSOR REMARK 3 S11: 0.1515 S12: -0.1919 S13: 0.1122 REMARK 3 S21: -0.0296 S22: 0.0370 S23: 0.1651 REMARK 3 S31: -0.1727 S32: 0.1091 S33: 0.1693 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 182 A 236 REMARK 3 ORIGIN FOR THE GROUP (A): 58.7353 30.4619 7.8983 REMARK 3 T TENSOR REMARK 3 T11: 0.0328 T22: -0.4346 REMARK 3 T33: -0.1870 T12: 0.2568 REMARK 3 T13: -0.0258 T23: 0.6436 REMARK 3 L TENSOR REMARK 3 L11: 0.0286 L22: 0.1523 REMARK 3 L33: 0.0594 L12: 0.0675 REMARK 3 L13: 0.0449 L23: 0.0439 REMARK 3 S TENSOR REMARK 3 S11: 0.0532 S12: -0.1317 S13: 0.0606 REMARK 3 S21: 0.1548 S22: -0.0292 S23: 0.1052 REMARK 3 S31: 0.0048 S32: 0.0267 S33: 0.1416 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 237 A 255 REMARK 3 ORIGIN FOR THE GROUP (A): 56.8160 20.3700 10.7008 REMARK 3 T TENSOR REMARK 3 T11: 0.2206 T22: 0.1457 REMARK 3 T33: -0.0081 T12: 0.0041 REMARK 3 T13: 0.2282 T23: 0.2832 REMARK 3 L TENSOR REMARK 3 L11: 0.0213 L22: 0.0749 REMARK 3 L33: 0.0276 L12: 0.0073 REMARK 3 L13: 0.0155 L23: 0.0362 REMARK 3 S TENSOR REMARK 3 S11: -0.0254 S12: -0.0322 S13: 0.0437 REMARK 3 S21: -0.0069 S22: 0.0012 S23: -0.0223 REMARK 3 S31: 0.0065 S32: -0.0251 S33: 0.0175 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 256 A 275 REMARK 3 ORIGIN FOR THE GROUP (A): 61.3278 13.1876 4.8513 REMARK 3 T TENSOR REMARK 3 T11: 0.6315 T22: -0.0271 REMARK 3 T33: 0.6110 T12: 0.0268 REMARK 3 T13: 0.1321 T23: -0.0524 REMARK 3 L TENSOR REMARK 3 L11: 0.0267 L22: 0.0007 REMARK 3 L33: 0.0119 L12: -0.0083 REMARK 3 L13: -0.0137 L23: 0.0066 REMARK 3 S TENSOR REMARK 3 S11: -0.0993 S12: -0.0933 S13: 0.0065 REMARK 3 S21: 0.0220 S22: 0.0393 S23: -0.0250 REMARK 3 S31: 0.0965 S32: 0.1102 S33: -0.0043 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 276 A 295 REMARK 3 ORIGIN FOR THE GROUP (A): 53.3873 12.9130 1.1610 REMARK 3 T TENSOR REMARK 3 T11: 0.4209 T22: 0.1925 REMARK 3 T33: 0.2559 T12: 0.1380 REMARK 3 T13: -0.0915 T23: 0.1126 REMARK 3 L TENSOR REMARK 3 L11: 0.0584 L22: 0.1129 REMARK 3 L33: 0.0105 L12: -0.0875 REMARK 3 L13: 0.0150 L23: -0.0096 REMARK 3 S TENSOR REMARK 3 S11: -0.0035 S12: -0.1124 S13: -0.0811 REMARK 3 S21: 0.0514 S22: -0.0105 S23: -0.0250 REMARK 3 S31: 0.0658 S32: 0.0468 S33: 0.0650 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 296 A 315 REMARK 3 ORIGIN FOR THE GROUP (A): 48.8723 8.3918 -0.2178 REMARK 3 T TENSOR REMARK 3 T11: 0.4120 T22: 0.2833 REMARK 3 T33: 0.2887 T12: 0.1511 REMARK 3 T13: 0.1462 T23: 0.2155 REMARK 3 L TENSOR REMARK 3 L11: 0.0238 L22: 0.0173 REMARK 3 L33: 0.0392 L12: -0.0057 REMARK 3 L13: -0.0196 L23: 0.0075 REMARK 3 S TENSOR REMARK 3 S11: -0.0201 S12: 0.0124 S13: -0.0363 REMARK 3 S21: 0.0143 S22: 0.0245 S23: -0.0250 REMARK 3 S31: 0.0565 S32: 0.0028 S33: -0.0016 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 316 A 335 REMARK 3 ORIGIN FOR THE GROUP (A): 46.0235 6.8544 -4.1469 REMARK 3 T TENSOR REMARK 3 T11: 0.4091 T22: 0.3096 REMARK 3 T33: 0.5019 T12: -0.1986 REMARK 3 T13: 0.1583 T23: -0.2005 REMARK 3 L TENSOR REMARK 3 L11: 0.1191 L22: 0.0369 REMARK 3 L33: 0.0456 L12: 0.0187 REMARK 3 L13: -0.0251 L23: 0.0316 REMARK 3 S TENSOR REMARK 3 S11: -0.0066 S12: -0.1570 S13: -0.0378 REMARK 3 S21: -0.0333 S22: -0.0609 S23: -0.0174 REMARK 3 S31: -0.0053 S32: 0.0109 S33: -0.0189 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.10 REMARK 3 ION PROBE RADIUS : NULL REMARK 3 SHRINKAGE RADIUS : 0.86 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4GLP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-SEP-12. REMARK 100 THE DEPOSITION ID IS D_1000074340. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-MAR-12 REMARK 200 TEMPERATURE (KELVIN) : 77.0 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-G REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97857 REMARK 200 MONOCHROMATOR : C(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 4780 REMARK 200 RESOLUTION RANGE HIGH (A) : 4.000 REMARK 200 RESOLUTION RANGE LOW (A) : 29.310 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.08600 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 17.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 4.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 4.10 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.84200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.190 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 70.23 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.13 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG 6000, 0.1 M 2-(N REMARK 280 -MORPHOLINO)ETHANESULFONIC ACID, 0.2 M CALCIUM ACETATE, PH 6.0, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 29.38000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 14.69000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 14.69000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 29.38000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 308 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CB CYS A 187 SG CYS A 217 1.37 REMARK 500 SG CYS A 34 CB CYS A 51 1.49 REMARK 500 OD1 ASP A 200 OG SER A 202 2.16 REMARK 500 OG SER A 186 OE1 GLN A 189 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 210 NE - CZ - NH1 ANGL. DEV. = -5.8 DEGREES REMARK 500 PRO A 267 C - N - CA ANGL. DEV. = 9.2 DEGREES REMARK 500 PRO A 313 C - N - CA ANGL. DEV. = 9.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 27 85.14 -169.10 REMARK 500 GLU A 30 77.56 -111.02 REMARK 500 ASP A 31 26.63 46.00 REMARK 500 PHE A 32 9.57 -163.24 REMARK 500 ARG A 33 -153.44 -159.87 REMARK 500 CYS A 34 -177.09 -174.34 REMARK 500 VAL A 35 -53.40 -156.82 REMARK 500 SER A 39 -33.66 173.22 REMARK 500 GLN A 42 79.90 -152.40 REMARK 500 TRP A 45 -24.06 -35.92 REMARK 500 CYS A 51 42.29 -95.48 REMARK 500 ALA A 61 -22.23 -161.47 REMARK 500 VAL A 73 81.09 -43.74 REMARK 500 ASP A 74 35.69 -160.33 REMARK 500 ALA A 75 54.25 -173.41 REMARK 500 ALA A 77 -107.06 -57.27 REMARK 500 GLN A 81 -42.33 -137.15 REMARK 500 TYR A 82 51.86 -115.67 REMARK 500 ALA A 83 -55.81 -142.80 REMARK 500 ARG A 90 63.39 -46.97 REMARK 500 ALA A 98 -35.26 -174.79 REMARK 500 ALA A 99 -179.65 -62.94 REMARK 500 SER A 116 -179.48 -65.49 REMARK 500 LYS A 119 -53.45 -124.56 REMARK 500 LEU A 126 -159.36 -110.93 REMARK 500 LYS A 127 89.76 -170.82 REMARK 500 THR A 129 -167.00 -109.67 REMARK 500 PRO A 136 -99.11 -58.03 REMARK 500 LEU A 137 -153.65 -55.30 REMARK 500 ALA A 139 78.42 -45.12 REMARK 500 TRP A 154 -159.44 -122.46 REMARK 500 ALA A 155 -80.95 -100.87 REMARK 500 GLN A 179 154.03 60.41 REMARK 500 ALA A 180 -152.48 -169.65 REMARK 500 HIS A 181 -54.17 -138.97 REMARK 500 PRO A 183 -46.50 -29.99 REMARK 500 CYS A 187 39.92 -63.36 REMARK 500 ALA A 192 -76.65 70.28 REMARK 500 PHE A 193 71.01 36.46 REMARK 500 LEU A 196 80.19 -63.39 REMARK 500 LEU A 199 115.50 -161.98 REMARK 500 PRO A 205 70.40 -56.05 REMARK 500 ALA A 215 -67.17 -99.34 REMARK 500 HIS A 219 8.98 47.80 REMARK 500 GLN A 225 -94.55 -92.41 REMARK 500 ARG A 230 -122.35 -65.90 REMARK 500 ASN A 231 76.17 -65.22 REMARK 500 GLU A 235 -98.87 -118.14 REMARK 500 ALA A 247 -86.69 -71.00 REMARK 500 HIS A 252 -81.49 -105.00 REMARK 500 REMARK 500 THIS ENTRY HAS 75 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ALA A 75 ASP A 76 -148.03 REMARK 500 REMARK 500 REMARK: NULL DBREF 4GLP A 26 335 UNP P08571 CD14_HUMAN 26 335 SEQADV 4GLP SER A 306 UNP P08571 CYS 306 ENGINEERED MUTATION SEQRES 1 A 310 GLU LEU ASP ASP GLU ASP PHE ARG CYS VAL CYS ASN PHE SEQRES 2 A 310 SER GLU PRO GLN PRO ASP TRP SER GLU ALA PHE GLN CYS SEQRES 3 A 310 VAL SER ALA VAL GLU VAL GLU ILE HIS ALA GLY GLY LEU SEQRES 4 A 310 ASN LEU GLU PRO PHE LEU LYS ARG VAL ASP ALA ASP ALA SEQRES 5 A 310 ASP PRO ARG GLN TYR ALA ASP THR VAL LYS ALA LEU ARG SEQRES 6 A 310 VAL ARG ARG LEU THR VAL GLY ALA ALA GLN VAL PRO ALA SEQRES 7 A 310 GLN LEU LEU VAL GLY ALA LEU ARG VAL LEU ALA TYR SER SEQRES 8 A 310 ARG LEU LYS GLU LEU THR LEU GLU ASP LEU LYS ILE THR SEQRES 9 A 310 GLY THR MET PRO PRO LEU PRO LEU GLU ALA THR GLY LEU SEQRES 10 A 310 ALA LEU SER SER LEU ARG LEU ARG ASN VAL SER TRP ALA SEQRES 11 A 310 THR GLY ARG SER TRP LEU ALA GLU LEU GLN GLN TRP LEU SEQRES 12 A 310 LYS PRO GLY LEU LYS VAL LEU SER ILE ALA GLN ALA HIS SEQRES 13 A 310 SER PRO ALA PHE SER CYS GLU GLN VAL ARG ALA PHE PRO SEQRES 14 A 310 ALA LEU THR SER LEU ASP LEU SER ASP ASN PRO GLY LEU SEQRES 15 A 310 GLY GLU ARG GLY LEU MET ALA ALA LEU CYS PRO HIS LYS SEQRES 16 A 310 PHE PRO ALA ILE GLN ASN LEU ALA LEU ARG ASN THR GLY SEQRES 17 A 310 MET GLU THR PRO THR GLY VAL CYS ALA ALA LEU ALA ALA SEQRES 18 A 310 ALA GLY VAL GLN PRO HIS SER LEU ASP LEU SER HIS ASN SEQRES 19 A 310 SER LEU ARG ALA THR VAL ASN PRO SER ALA PRO ARG CYS SEQRES 20 A 310 MET TRP SER SER ALA LEU ASN SER LEU ASN LEU SER PHE SEQRES 21 A 310 ALA GLY LEU GLU GLN VAL PRO LYS GLY LEU PRO ALA LYS SEQRES 22 A 310 LEU ARG VAL LEU ASP LEU SER SER ASN ARG LEU ASN ARG SEQRES 23 A 310 ALA PRO GLN PRO ASP GLU LEU PRO GLU VAL ASP ASN LEU SEQRES 24 A 310 THR LEU ASP GLY ASN PRO PHE LEU VAL PRO GLY HELIX 1 1 ASP A 44 VAL A 52 5 9 HELIX 2 2 ALA A 83 LYS A 87 5 5 HELIX 3 3 PRO A 102 SER A 116 1 15 HELIX 4 4 TRP A 160 GLN A 166 1 7 HELIX 5 5 LEU A 207 ALA A 214 1 8 HELIX 6 6 THR A 236 GLY A 248 1 13 SHEET 1 A 6 GLU A 56 GLU A 58 0 SHEET 2 A 6 ARG A 93 VAL A 96 1 O THR A 95 N VAL A 57 SHEET 3 A 6 GLU A 120 GLU A 124 1 O GLU A 120 N LEU A 94 SHEET 4 A 6 ARG A 148 ARG A 150 1 O ARG A 148 N LEU A 121 SHEET 5 A 6 VAL A 174 ALA A 178 1 O ALA A 178 N LEU A 149 SHEET 6 A 6 SER A 198 ASP A 200 1 O ASP A 200 N LEU A 175 SHEET 1 B 4 LEU A 254 ASP A 255 0 SHEET 2 B 4 LEU A 281 ASN A 282 1 O ASN A 282 N LEU A 254 SHEET 3 B 4 LEU A 302 ASP A 303 1 O ASP A 303 N LEU A 281 SHEET 4 B 4 LEU A 324 THR A 325 1 O THR A 325 N LEU A 302 SSBOND 1 CYS A 34 CYS A 51 1555 1555 2.03 SSBOND 2 CYS A 187 CYS A 217 1555 1555 2.03 SSBOND 3 CYS A 241 CYS A 272 1555 1555 2.04 CISPEP 1 LYS A 71 ARG A 72 0 -6.81 CISPEP 2 PRO A 267 SER A 268 0 -1.77 CRYST1 147.520 147.520 44.070 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006779 0.003914 0.000000 0.00000 SCALE2 0.000000 0.007827 0.000000 0.00000 SCALE3 0.000000 0.000000 0.022691 0.00000