PDB Short entry for 4H39 HEADER TRANSFERASE 13-SEP-12 4H39 TITLE CRYSTAL STRUCTURE OF JNK3 IN COMPLEX WITH JIP1 PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: MITOGEN-ACTIVATED PROTEIN KINASE 10; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: CATALYTIC DOMAIN (UNP RESIDUES 45-400); COMPND 5 SYNONYM: MAP KINASE 10, MAPK 10, MAP KINASE P49 3F12, STRESS- COMPND 6 ACTIVATED PROTEIN KINASE 1B, SAPK1B, STRESS-ACTIVATED PROTEIN KINASE COMPND 7 JNK3, C-JUN N-TERMINAL KINASE 3; COMPND 8 EC: 2.7.11.24; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 2; COMPND 11 MOLECULE: C-JUN-AMINO-TERMINAL KINASE-INTERACTING PROTEIN 1; COMPND 12 CHAIN: B; COMPND 13 FRAGMENT: UNP RESIDUES 158-167; COMPND 14 SYNONYM: JIP-1, JNK-INTERACTING PROTEIN 1, ISLET-BRAIN 1, IB-1, JNK COMPND 15 MAP KINASE SCAFFOLD PROTEIN 1, MITOGEN-ACTIVATED PROTEIN KINASE 8- COMPND 16 INTERACTING PROTEIN 1; COMPND 17 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: JNK3, JNK3A, MAPK10, PRKM10, SAPK1B; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606 KEYWDS MAPK, KINASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR J.C.NWACHUKWU,J.D.LAUGHLIN,M.FIGUERA-LOSADA,L.CHERRY,K.W.NETTLES, AUTHOR 2 P.V.LOGRASSO REVDAT 5 20-SEP-23 4H39 1 REMARK REVDAT 4 17-JUN-15 4H39 1 ATOM COMPND DBREF SEQADV REVDAT 4 2 1 SEQRES REVDAT 3 26-DEC-12 4H39 1 JRNL REVDAT 2 28-NOV-12 4H39 1 JRNL REVDAT 1 21-NOV-12 4H39 0 JRNL AUTH J.D.LAUGHLIN,J.C.NWACHUKWU,M.FIGUERA-LOSADA,L.CHERRY, JRNL AUTH 2 K.W.NETTLES,P.V.LOGRASSO JRNL TITL STRUCTURAL MECHANISMS OF ALLOSTERY AND AUTOINHIBITION IN JNK JRNL TITL 2 FAMILY KINASES. JRNL REF STRUCTURE V. 20 2174 2012 JRNL REFN ISSN 0969-2126 JRNL PMID 23142346 JRNL DOI 10.1016/J.STR.2012.09.021 REMARK 2 REMARK 2 RESOLUTION. 1.99 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7.1_743) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.99 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.51 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 91.8 REMARK 3 NUMBER OF REFLECTIONS : 28561 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.211 REMARK 3 R VALUE (WORKING SET) : 0.209 REMARK 3 FREE R VALUE : 0.239 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 6.760 REMARK 3 FREE R VALUE TEST SET COUNT : 1931 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 37.5170 - 4.7984 0.99 2197 162 0.1957 0.2274 REMARK 3 2 4.7984 - 3.8098 1.00 2122 152 0.1702 0.1753 REMARK 3 3 3.8098 - 3.3286 0.84 1757 122 0.2002 0.1988 REMARK 3 4 3.3286 - 3.0244 1.00 2076 151 0.2098 0.2432 REMARK 3 5 3.0244 - 2.8077 0.99 2061 150 0.2259 0.2623 REMARK 3 6 2.8077 - 2.6422 0.99 2027 142 0.2201 0.2956 REMARK 3 7 2.6422 - 2.5099 0.99 2057 147 0.2341 0.3055 REMARK 3 8 2.5099 - 2.4007 0.98 2003 148 0.2309 0.2448 REMARK 3 9 2.4007 - 2.3083 0.97 1988 145 0.2381 0.2765 REMARK 3 10 2.3083 - 2.2286 0.55 1114 79 0.3687 0.4995 REMARK 3 11 2.2286 - 2.1590 0.86 1726 131 0.2500 0.2956 REMARK 3 12 2.1590 - 2.0972 0.94 1894 137 0.2287 0.2695 REMARK 3 13 2.0972 - 2.0420 0.93 1897 137 0.2375 0.2802 REMARK 3 14 2.0420 - 1.9920 0.84 1711 128 0.2550 0.3348 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.30 REMARK 3 SHRINKAGE RADIUS : 1.06 REMARK 3 K_SOL : 0.32 REMARK 3 B_SOL : 41.56 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.650 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.470 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 4.56620 REMARK 3 B22 (A**2) : 2.36460 REMARK 3 B33 (A**2) : -6.93080 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 2842 REMARK 3 ANGLE : 0.720 3867 REMARK 3 CHIRALITY : 0.053 438 REMARK 3 PLANARITY : 0.003 497 REMARK 3 DIHEDRAL : 12.975 1055 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 16 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 45:57) REMARK 3 ORIGIN FOR THE GROUP (A): 13.5733 -11.0903 -8.2474 REMARK 3 T TENSOR REMARK 3 T11: 0.3452 T22: 0.4127 REMARK 3 T33: 0.3380 T12: 0.1069 REMARK 3 T13: -0.0437 T23: -0.0138 REMARK 3 L TENSOR REMARK 3 L11: 1.4126 L22: 5.6791 REMARK 3 L33: 6.7272 L12: -0.8781 REMARK 3 L13: -0.8510 L23: 0.6216 REMARK 3 S TENSOR REMARK 3 S11: -0.3224 S12: -0.3744 S13: -0.1356 REMARK 3 S21: 0.2883 S22: 0.5320 S23: -0.6868 REMARK 3 S31: -0.0287 S32: 0.7878 S33: 0.0489 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 58:87) REMARK 3 ORIGIN FOR THE GROUP (A): 6.1087 -4.7178 -6.9274 REMARK 3 T TENSOR REMARK 3 T11: 0.2917 T22: 0.2266 REMARK 3 T33: 0.2806 T12: -0.0073 REMARK 3 T13: -0.0269 T23: 0.0096 REMARK 3 L TENSOR REMARK 3 L11: 4.8824 L22: 5.0724 REMARK 3 L33: 3.8389 L12: -0.3036 REMARK 3 L13: -2.1116 L23: -0.3003 REMARK 3 S TENSOR REMARK 3 S11: -0.1267 S12: -0.1897 S13: 0.1924 REMARK 3 S21: 0.1129 S22: 0.0748 S23: 0.2055 REMARK 3 S31: 0.1228 S32: -0.0826 S33: -0.0480 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 88:113) REMARK 3 ORIGIN FOR THE GROUP (A): 9.1177 -0.7707 -22.4003 REMARK 3 T TENSOR REMARK 3 T11: 0.3449 T22: 0.3683 REMARK 3 T33: 0.4169 T12: -0.0271 REMARK 3 T13: -0.0033 T23: 0.0106 REMARK 3 L TENSOR REMARK 3 L11: 2.4005 L22: 2.9442 REMARK 3 L33: 4.2134 L12: -0.5484 REMARK 3 L13: -1.7741 L23: -1.5873 REMARK 3 S TENSOR REMARK 3 S11: 0.0072 S12: 0.2555 S13: 0.1927 REMARK 3 S21: -0.4987 S22: -0.0263 S23: -0.0700 REMARK 3 S31: 0.0910 S32: -0.1869 S33: -0.1444 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 114:127) REMARK 3 ORIGIN FOR THE GROUP (A): 2.2583 11.9319 -15.0571 REMARK 3 T TENSOR REMARK 3 T11: 0.3511 T22: 0.3749 REMARK 3 T33: 0.4195 T12: 0.0162 REMARK 3 T13: -0.0528 T23: -0.0189 REMARK 3 L TENSOR REMARK 3 L11: 1.9226 L22: 1.6028 REMARK 3 L33: 0.7451 L12: -0.3148 REMARK 3 L13: 0.7888 L23: -0.9603 REMARK 3 S TENSOR REMARK 3 S11: 0.0952 S12: 0.1781 S13: 0.0829 REMARK 3 S21: -0.0854 S22: 0.0197 S23: -0.4655 REMARK 3 S31: -0.3589 S32: 0.4181 S33: 0.0969 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 128:146) REMARK 3 ORIGIN FOR THE GROUP (A): 16.8642 -2.0479 -15.6946 REMARK 3 T TENSOR REMARK 3 T11: 0.3599 T22: 0.3524 REMARK 3 T33: 0.4101 T12: -0.0191 REMARK 3 T13: -0.0144 T23: 0.0266 REMARK 3 L TENSOR REMARK 3 L11: 4.3975 L22: 4.1125 REMARK 3 L33: 3.8043 L12: -1.0440 REMARK 3 L13: 0.0500 L23: -0.0783 REMARK 3 S TENSOR REMARK 3 S11: 0.4025 S12: 0.2652 S13: 0.0638 REMARK 3 S21: -0.5555 S22: -0.1113 S23: -0.4972 REMARK 3 S31: 0.1178 S32: 0.3994 S33: 0.0550 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN A AND RESID 147:157) REMARK 3 ORIGIN FOR THE GROUP (A): -11.2589 2.1383 -11.5746 REMARK 3 T TENSOR REMARK 3 T11: 0.4600 T22: 0.3424 REMARK 3 T33: 0.3949 T12: 0.0094 REMARK 3 T13: 0.0342 T23: 0.0755 REMARK 3 L TENSOR REMARK 3 L11: 5.8980 L22: 3.0278 REMARK 3 L33: 3.9734 L12: -3.5834 REMARK 3 L13: 3.3121 L23: -0.8784 REMARK 3 S TENSOR REMARK 3 S11: -0.0157 S12: -0.4381 S13: -0.1214 REMARK 3 S21: -0.0876 S22: 0.0753 S23: 0.1431 REMARK 3 S31: 0.2791 S32: -0.5488 S33: -0.1915 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN A AND RESID 158:164) REMARK 3 ORIGIN FOR THE GROUP (A): -23.9015 9.1571 -9.6107 REMARK 3 T TENSOR REMARK 3 T11: 0.6674 T22: 0.5470 REMARK 3 T33: 0.4689 T12: -0.0028 REMARK 3 T13: 0.1144 T23: 0.1370 REMARK 3 L TENSOR REMARK 3 L11: 4.8515 L22: 2.4949 REMARK 3 L33: 4.6924 L12: -2.0913 REMARK 3 L13: 1.0778 L23: 2.0497 REMARK 3 S TENSOR REMARK 3 S11: -0.9152 S12: -0.3096 S13: -0.6620 REMARK 3 S21: 0.2189 S22: 0.4811 S23: 0.9102 REMARK 3 S31: -0.1273 S32: -0.5309 S33: -0.1347 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN A AND RESID 165:205) REMARK 3 ORIGIN FOR THE GROUP (A): -9.2263 11.8248 -16.6755 REMARK 3 T TENSOR REMARK 3 T11: 0.3287 T22: 0.2606 REMARK 3 T33: 0.3067 T12: 0.0220 REMARK 3 T13: -0.0179 T23: -0.0042 REMARK 3 L TENSOR REMARK 3 L11: 2.0258 L22: 2.9361 REMARK 3 L33: 1.9878 L12: -0.6885 REMARK 3 L13: 0.6506 L23: -1.2530 REMARK 3 S TENSOR REMARK 3 S11: 0.0011 S12: -0.2006 S13: -0.0551 REMARK 3 S21: 0.2235 S22: -0.0005 S23: -0.1552 REMARK 3 S31: -0.1995 S32: 0.0529 S33: 0.1056 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: (CHAIN A AND RESID 206:227) REMARK 3 ORIGIN FOR THE GROUP (A): -8.8557 0.9122 -23.2501 REMARK 3 T TENSOR REMARK 3 T11: 1.1150 T22: 0.9805 REMARK 3 T33: 0.6698 T12: -0.2915 REMARK 3 T13: 0.1490 T23: 0.0741 REMARK 3 L TENSOR REMARK 3 L11: 0.2808 L22: 4.3382 REMARK 3 L33: 5.0388 L12: -1.0882 REMARK 3 L13: 0.1411 L23: -1.1013 REMARK 3 S TENSOR REMARK 3 S11: -0.3271 S12: 1.2826 S13: -0.2323 REMARK 3 S21: 0.2846 S22: 1.1871 S23: 0.2304 REMARK 3 S31: 2.3036 S32: -1.7253 S33: -0.1861 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: (CHAIN A AND RESID 228:267) REMARK 3 ORIGIN FOR THE GROUP (A): -16.9391 8.6324 -28.6071 REMARK 3 T TENSOR REMARK 3 T11: 0.3062 T22: 0.2387 REMARK 3 T33: 0.3258 T12: 0.0233 REMARK 3 T13: -0.0249 T23: -0.0328 REMARK 3 L TENSOR REMARK 3 L11: 3.4763 L22: 2.4241 REMARK 3 L33: 5.9203 L12: 0.8868 REMARK 3 L13: 0.6110 L23: -0.4901 REMARK 3 S TENSOR REMARK 3 S11: 0.0451 S12: 0.2081 S13: -0.3643 REMARK 3 S21: -0.1015 S22: 0.1679 S23: -0.2853 REMARK 3 S31: 0.5095 S32: -0.1515 S33: -0.1902 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: (CHAIN A AND RESID 268:306) REMARK 3 ORIGIN FOR THE GROUP (A): -22.6830 9.3197 -42.3972 REMARK 3 T TENSOR REMARK 3 T11: 0.2879 T22: 0.3855 REMARK 3 T33: 0.2948 T12: -0.0212 REMARK 3 T13: 0.0088 T23: -0.0891 REMARK 3 L TENSOR REMARK 3 L11: 4.2179 L22: 3.2028 REMARK 3 L33: 7.5888 L12: 0.9011 REMARK 3 L13: 0.0129 L23: 1.9418 REMARK 3 S TENSOR REMARK 3 S11: 0.1784 S12: 0.6302 S13: -0.0496 REMARK 3 S21: -0.2719 S22: 0.1537 S23: -0.0964 REMARK 3 S31: -0.0689 S32: -0.2580 S33: -0.0680 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: (CHAIN A AND RESID 307:328) REMARK 3 ORIGIN FOR THE GROUP (A): -31.9228 14.8978 -19.2503 REMARK 3 T TENSOR REMARK 3 T11: 0.4511 T22: 0.7163 REMARK 3 T33: 0.4520 T12: -0.0299 REMARK 3 T13: 0.0548 T23: 0.0225 REMARK 3 L TENSOR REMARK 3 L11: 4.0546 L22: 3.6366 REMARK 3 L33: 4.8301 L12: 1.2611 REMARK 3 L13: 0.7185 L23: 0.3208 REMARK 3 S TENSOR REMARK 3 S11: 0.3013 S12: -0.5292 S13: 0.1942 REMARK 3 S21: 0.7682 S22: -0.2261 S23: 0.8062 REMARK 3 S31: -0.5006 S32: -1.4860 S33: 0.2273 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: (CHAIN A AND RESID 329:368) REMARK 3 ORIGIN FOR THE GROUP (A): -17.8507 21.5587 -20.8047 REMARK 3 T TENSOR REMARK 3 T11: 0.3751 T22: 0.2585 REMARK 3 T33: 0.3157 T12: 0.0644 REMARK 3 T13: -0.0065 T23: -0.0291 REMARK 3 L TENSOR REMARK 3 L11: 1.1324 L22: 2.0465 REMARK 3 L33: 5.0115 L12: -0.2900 REMARK 3 L13: 0.4139 L23: 0.8195 REMARK 3 S TENSOR REMARK 3 S11: -0.1637 S12: -0.1182 S13: 0.2464 REMARK 3 S21: 0.1308 S22: 0.0485 S23: -0.0182 REMARK 3 S31: -0.5411 S32: -0.1139 S33: 0.0712 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: (CHAIN A AND RESID 369:387) REMARK 3 ORIGIN FOR THE GROUP (A): 9.0290 13.2988 -27.8040 REMARK 3 T TENSOR REMARK 3 T11: 0.6937 T22: 0.5551 REMARK 3 T33: 0.5101 T12: -0.1630 REMARK 3 T13: 0.0457 T23: 0.0093 REMARK 3 L TENSOR REMARK 3 L11: 5.4416 L22: 6.9499 REMARK 3 L33: 2.8935 L12: -4.5805 REMARK 3 L13: -0.1664 L23: -0.3536 REMARK 3 S TENSOR REMARK 3 S11: 0.6127 S12: 0.0983 S13: 0.7550 REMARK 3 S21: -0.8331 S22: -0.5624 S23: -0.4495 REMARK 3 S31: -0.3304 S32: 0.0309 S33: 0.2320 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: (CHAIN A AND RESID 388:400) REMARK 3 ORIGIN FOR THE GROUP (A): 19.4533 4.0894 -22.9853 REMARK 3 T TENSOR REMARK 3 T11: 0.3712 T22: 0.5332 REMARK 3 T33: 0.5183 T12: -0.0474 REMARK 3 T13: 0.0395 T23: 0.0838 REMARK 3 L TENSOR REMARK 3 L11: 5.6474 L22: 5.4393 REMARK 3 L33: 7.2565 L12: -1.9802 REMARK 3 L13: 1.5768 L23: -1.1883 REMARK 3 S TENSOR REMARK 3 S11: -0.3422 S12: 0.3457 S13: 0.5237 REMARK 3 S21: -0.1171 S22: -0.0180 S23: -0.7277 REMARK 3 S31: -0.3851 S32: 1.1669 S33: 0.2706 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: (CHAIN B AND RESID 158:167) REMARK 3 ORIGIN FOR THE GROUP (A): -16.3677 10.7683 -3.4081 REMARK 3 T TENSOR REMARK 3 T11: 0.4577 T22: 0.5834 REMARK 3 T33: 0.3273 T12: 0.0618 REMARK 3 T13: 0.1239 T23: 0.0037 REMARK 3 L TENSOR REMARK 3 L11: 8.8630 L22: 5.9671 REMARK 3 L33: 9.8294 L12: -3.9059 REMARK 3 L13: 0.0701 L23: 1.4662 REMARK 3 S TENSOR REMARK 3 S11: -0.6248 S12: -0.1153 S13: -0.5372 REMARK 3 S21: 1.7655 S22: 0.2821 S23: 1.1278 REMARK 3 S31: 0.2787 S32: -1.1350 S33: 0.4251 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4H39 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-SEP-12. REMARK 100 THE DEPOSITION ID IS D_1000074963. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-JAN-11 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL11-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.17 REMARK 200 MONOCHROMATOR : SIDE SCATTERING BENT-CUBE I-BEAM REMARK 200 SINGLE CRYSTAL, ASYMMETRIC CUT REMARK 200 4.965 DEGREES REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29642 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.992 REMARK 200 RESOLUTION RANGE LOW (A) : 37.510 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.3 REMARK 200 DATA REDUNDANCY : 7.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 49.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.99 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.09 REMARK 200 COMPLETENESS FOR SHELL (%) : 81.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX 1.7.1_743 REMARK 200 STARTING MODEL: PDB ENTRY 1JNK REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.62 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M SODIUM CHLORIDE, 0.1 M BIS-TRIS, REMARK 280 28-31% PEG3350, PH 5.5, VAPOR DIFFUSION, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 31.60300 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 41.95850 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 41.85550 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 41.95850 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 31.60300 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 41.85550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1190 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16500 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -7.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU A 210 REMARK 465 ALA A 211 REMARK 465 ARG A 212 REMARK 465 THR A 213 REMARK 465 ALA A 214 REMARK 465 GLY A 215 REMARK 465 THR A 216 REMARK 465 SER A 217 REMARK 465 PHE A 218 REMARK 465 MET A 219 REMARK 465 MET A 220 REMARK 465 ALA A 320 REMARK 465 ASP A 321 REMARK 465 SER A 322 REMARK 465 GLU A 323 REMARK 465 HIS A 324 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 45 CG OD1 OD2 REMARK 470 GLN A 75 CG CD OE1 NE2 REMARK 470 LYS A 116 CG CD CE NZ REMARK 470 LYS A 134 CG CD CE NZ REMARK 470 ARG A 188 CD NE CZ NH1 NH2 REMARK 470 TYR A 223 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS A 260 CG CD CE NZ REMARK 470 ARG A 266 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 274 CD CE NZ REMARK 470 GLU A 285 CD OE1 OE2 REMARK 470 LYS A 288 CD CE NZ REMARK 470 LYS A 289 CE NZ REMARK 470 LYS A 311 CE NZ REMARK 470 LYS A 326 CG CD CE NZ REMARK 470 LYS A 378 CG CD CE NZ REMARK 470 GLN A 379 CG CD OE1 NE2 REMARK 470 GLU A 382 CG CD OE1 OE2 REMARK 470 LYS A 396 CG CD CE NZ REMARK 470 LYS B 159 CG CD CE NZ REMARK 470 PHE B 167 CG CD1 CD2 CE1 CE2 CZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU A 164 O HOH A 573 1.82 REMARK 500 O PRO B 158 O HOH B 208 1.85 REMARK 500 OE2 GLU A 392 O HOH A 588 2.00 REMARK 500 O HOH A 642 O HOH A 646 2.03 REMARK 500 O ASP A 207 N GLY A 209 2.07 REMARK 500 O ARG A 227 NE2 GLN A 271 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 46 -70.74 30.82 REMARK 500 ALA A 74 -117.84 71.51 REMARK 500 ASN A 119 84.38 -153.31 REMARK 500 GLN A 140 -42.93 -141.70 REMARK 500 ARG A 188 -15.72 77.50 REMARK 500 PHE A 208 39.40 -48.04 REMARK 500 THR A 226 -167.74 -61.66 REMARK 500 ARG A 227 -66.58 94.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4H36 RELATED DB: PDB REMARK 900 JNK3 COMPLEXED WITH ATF2 PEPTIDE REMARK 900 RELATED ID: 4H3B RELATED DB: PDB REMARK 900 JNK3 COMPLEXED WITH SAB PEPTIDE DBREF 4H39 A 45 400 UNP P53779 MK10_HUMAN 45 400 DBREF 4H39 B 158 167 UNP Q9UQF2 JIP1_HUMAN 158 167 SEQRES 1 A 356 ASP ASN GLN PHE TYR SER VAL GLU VAL GLY ASP SER THR SEQRES 2 A 356 PHE THR VAL LEU LYS ARG TYR GLN ASN LEU LYS PRO ILE SEQRES 3 A 356 GLY SER GLY ALA GLN GLY ILE VAL CYS ALA ALA TYR ASP SEQRES 4 A 356 ALA VAL LEU ASP ARG ASN VAL ALA ILE LYS LYS LEU SER SEQRES 5 A 356 ARG PRO PHE GLN ASN GLN THR HIS ALA LYS ARG ALA TYR SEQRES 6 A 356 ARG GLU LEU VAL LEU MET LYS CYS VAL ASN HIS LYS ASN SEQRES 7 A 356 ILE ILE SER LEU LEU ASN VAL PHE THR PRO GLN LYS THR SEQRES 8 A 356 LEU GLU GLU PHE GLN ASP VAL TYR LEU VAL MET GLU LEU SEQRES 9 A 356 MET ASP ALA ASN LEU CYS GLN VAL ILE GLN MET GLU LEU SEQRES 10 A 356 ASP HIS GLU ARG MET SER TYR LEU LEU TYR GLN MET LEU SEQRES 11 A 356 CYS GLY ILE LYS HIS LEU HIS SER ALA GLY ILE ILE HIS SEQRES 12 A 356 ARG ASP LEU LYS PRO SER ASN ILE VAL VAL LYS SER ASP SEQRES 13 A 356 CYS THR LEU LYS ILE LEU ASP PHE GLY LEU ALA ARG THR SEQRES 14 A 356 ALA GLY THR SER PHE MET MET THR PRO TYR VAL VAL THR SEQRES 15 A 356 ARG TYR TYR ARG ALA PRO GLU VAL ILE LEU GLY MET GLY SEQRES 16 A 356 TYR LYS GLU ASN VAL ASP ILE TRP SER VAL GLY CYS ILE SEQRES 17 A 356 MET GLY GLU MET VAL ARG HIS LYS ILE LEU PHE PRO GLY SEQRES 18 A 356 ARG ASP TYR ILE ASP GLN TRP ASN LYS VAL ILE GLU GLN SEQRES 19 A 356 LEU GLY THR PRO CYS PRO GLU PHE MET LYS LYS LEU GLN SEQRES 20 A 356 PRO THR VAL ARG ASN TYR VAL GLU ASN ARG PRO LYS TYR SEQRES 21 A 356 ALA GLY LEU THR PHE PRO LYS LEU PHE PRO ASP SER LEU SEQRES 22 A 356 PHE PRO ALA ASP SER GLU HIS ASN LYS LEU LYS ALA SER SEQRES 23 A 356 GLN ALA ARG ASP LEU LEU SER LYS MET LEU VAL ILE ASP SEQRES 24 A 356 PRO ALA LYS ARG ILE SER VAL ASP ASP ALA LEU GLN HIS SEQRES 25 A 356 PRO TYR ILE ASN VAL TRP TYR ASP PRO ALA GLU VAL GLU SEQRES 26 A 356 ALA PRO PRO PRO GLN ILE TYR ASP LYS GLN LEU ASP GLU SEQRES 27 A 356 ARG GLU HIS THR ILE GLU GLU TRP LYS GLU LEU ILE TYR SEQRES 28 A 356 LYS GLU VAL MET ASN SEQRES 1 B 10 PRO LYS ARG PRO THR THR LEU ASN LEU PHE FORMUL 3 HOH *154(H2 O) HELIX 1 1 ASN A 101 CYS A 117 1 17 HELIX 2 2 LEU A 153 MET A 159 1 7 HELIX 3 3 ASP A 162 ALA A 183 1 22 HELIX 4 4 LYS A 191 SER A 193 5 3 HELIX 5 5 ALA A 231 LEU A 236 1 6 HELIX 6 6 ASN A 243 HIS A 259 1 17 HELIX 7 7 ASP A 267 GLY A 280 1 14 HELIX 8 8 CYS A 283 LYS A 288 1 6 HELIX 9 9 GLN A 291 GLU A 299 1 9 HELIX 10 10 THR A 308 PHE A 313 1 6 HELIX 11 11 PRO A 314 PHE A 318 5 5 HELIX 12 12 LYS A 326 LEU A 340 1 15 HELIX 13 13 ASP A 343 ARG A 347 5 5 HELIX 14 14 SER A 349 HIS A 356 1 8 HELIX 15 15 HIS A 356 VAL A 361 1 6 HELIX 16 16 ASP A 364 GLU A 369 1 6 HELIX 17 17 ASP A 377 ARG A 383 5 7 HELIX 18 18 THR A 386 ASN A 400 1 15 SHEET 1 A 2 PHE A 48 VAL A 53 0 SHEET 2 A 2 SER A 56 LEU A 61 -1 O SER A 56 N VAL A 53 SHEET 1 B 5 TYR A 64 SER A 72 0 SHEET 2 B 5 GLY A 76 ASP A 83 -1 O TYR A 82 N GLN A 65 SHEET 3 B 5 ARG A 88 LEU A 95 -1 O VAL A 90 N ALA A 81 SHEET 4 B 5 TYR A 143 GLU A 147 -1 O MET A 146 N ALA A 91 SHEET 5 B 5 LEU A 126 PHE A 130 -1 N ASN A 128 O VAL A 145 SHEET 1 C 3 ALA A 151 ASN A 152 0 SHEET 2 C 3 ILE A 195 VAL A 197 -1 O VAL A 197 N ALA A 151 SHEET 3 C 3 LEU A 203 ILE A 205 -1 O LYS A 204 N VAL A 196 CISPEP 1 GLY A 73 ALA A 74 0 1.90 CISPEP 2 THR A 221 PRO A 222 0 0.14 CRYST1 63.206 83.711 83.917 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015821 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011946 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011917 0.00000