PDB Short entry for 4I4S HEADER SUGAR BINDING PROTEIN 28-NOV-12 4I4S TITLE BEL BETA-TREFOIL COMPLEX WITH LACTOSE COMPND MOL_ID: 1; COMPND 2 MOLECULE: BEL BETA-TREFOIL; COMPND 3 CHAIN: A, B, C, D SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BOLETUS EDULIS; SOURCE 3 ORGANISM_COMMON: KING BOLETE MUSHROOM; SOURCE 4 ORGANISM_TAXID: 36056 KEYWDS LECTIN, FRUITING BODIES, SUGAR BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.BOVI,L.CENCI,M.PERDUCA,S.CAPALDI,M.E.CARRIZO,L.CIVIERO, AUTHOR 2 L.R.CHIARELLI,M.GALLIANO,H.L.MONACO REVDAT 3 20-SEP-23 4I4S 1 HETSYN REVDAT 2 29-JUL-20 4I4S 1 COMPND REMARK HET HETNAM REVDAT 2 2 1 HETSYN FORMUL LINK SITE REVDAT 2 3 1 ATOM REVDAT 1 24-APR-13 4I4S 0 JRNL AUTH M.BOVI,L.CENCI,M.PERDUCA,S.CAPALDI,M.E.CARRIZO,L.CIVIERO, JRNL AUTH 2 L.R.CHIARELLI,M.GALLIANO,H.L.MONACO JRNL TITL BEL {BETA}-TREFOIL: A NOVEL LECTIN WITH ANTINEOPLASTIC JRNL TITL 2 PROPERTIES IN KING BOLETE (BOLETUS EDULIS) MUSHROOMS. JRNL REF GLYCOBIOLOGY V. 23 578 2013 JRNL REFN ISSN 0959-6658 JRNL PMID 23213111 JRNL DOI 10.1093/GLYCOB/CWS164 REMARK 2 REMARK 2 RESOLUTION. 1.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 125098 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.189 REMARK 3 R VALUE (WORKING SET) : 0.189 REMARK 3 FREE R VALUE : 0.204 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 6648 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.43 REMARK 3 REFLECTION IN BIN (WORKING SET) : 8725 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.40 REMARK 3 BIN R VALUE (WORKING SET) : 0.2260 REMARK 3 BIN FREE R VALUE SET COUNT : 461 REMARK 3 BIN FREE R VALUE : 0.2430 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4740 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 169 REMARK 3 SOLVENT ATOMS : 747 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 14.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 10.53 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.03000 REMARK 3 B22 (A**2) : -0.03000 REMARK 3 B33 (A**2) : 0.01000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.01000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.063 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.062 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.037 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.587 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.950 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.944 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5097 ; 0.005 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6992 ; 1.071 ; 1.963 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 596 ; 5.915 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 276 ;32.800 ;23.913 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 668 ; 8.844 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 32 ;16.937 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 747 ; 0.073 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4076 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 146 REMARK 3 ORIGIN FOR THE GROUP (A): 10.8191 -0.8013 51.4669 REMARK 3 T TENSOR REMARK 3 T11: 0.0020 T22: 0.0122 REMARK 3 T33: 0.0196 T12: 0.0035 REMARK 3 T13: 0.0030 T23: 0.0137 REMARK 3 L TENSOR REMARK 3 L11: 0.6960 L22: 0.7453 REMARK 3 L33: 0.9220 L12: -0.1855 REMARK 3 L13: 0.2540 L23: -0.2119 REMARK 3 S TENSOR REMARK 3 S11: -0.0106 S12: -0.0312 S13: -0.0312 REMARK 3 S21: -0.0095 S22: 0.0420 S23: 0.0443 REMARK 3 S31: -0.0319 S32: -0.0693 S33: -0.0314 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 146 REMARK 3 ORIGIN FOR THE GROUP (A): 25.7756 -2.5354 77.5941 REMARK 3 T TENSOR REMARK 3 T11: 0.0124 T22: 0.0113 REMARK 3 T33: 0.0138 T12: 0.0017 REMARK 3 T13: 0.0014 T23: 0.0106 REMARK 3 L TENSOR REMARK 3 L11: 0.7350 L22: 0.5534 REMARK 3 L33: 0.8092 L12: 0.0186 REMARK 3 L13: -0.0500 L23: -0.0207 REMARK 3 S TENSOR REMARK 3 S11: 0.0186 S12: -0.0585 S13: -0.0189 REMARK 3 S21: 0.0476 S22: 0.0081 S23: -0.0076 REMARK 3 S31: -0.0226 S32: -0.0171 S33: -0.0267 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 1 C 146 REMARK 3 ORIGIN FOR THE GROUP (A): -4.7694 16.2561 22.9274 REMARK 3 T TENSOR REMARK 3 T11: 0.0154 T22: 0.0093 REMARK 3 T33: 0.0064 T12: 0.0102 REMARK 3 T13: 0.0052 T23: 0.0029 REMARK 3 L TENSOR REMARK 3 L11: 0.5759 L22: 0.5959 REMARK 3 L33: 0.8342 L12: 0.0453 REMARK 3 L13: -0.0089 L23: -0.1440 REMARK 3 S TENSOR REMARK 3 S11: 0.0098 S12: -0.0124 S13: -0.0001 REMARK 3 S21: 0.0426 S22: 0.0093 S23: 0.0049 REMARK 3 S31: -0.0198 S32: -0.0336 S33: -0.0190 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 1 D 146 REMARK 3 ORIGIN FOR THE GROUP (A): -18.9518 18.1720 -3.6147 REMARK 3 T TENSOR REMARK 3 T11: 0.0053 T22: 0.0267 REMARK 3 T33: 0.0234 T12: 0.0023 REMARK 3 T13: -0.0079 T23: 0.0122 REMARK 3 L TENSOR REMARK 3 L11: 0.7159 L22: 0.5838 REMARK 3 L33: 0.9861 L12: -0.0525 REMARK 3 L13: 0.1312 L23: 0.0071 REMARK 3 S TENSOR REMARK 3 S11: 0.0049 S12: -0.0010 S13: -0.0102 REMARK 3 S21: -0.0367 S22: 0.0208 S23: 0.0680 REMARK 3 S31: -0.0147 S32: -0.1218 S33: -0.0257 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 HYDROGENS HAVE BEEN USED IF PRESENT IN THE INPUT REMARK 3 U VALUES : RESIDUAL ONLY REMARK 4 REMARK 4 4I4S COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-NOV-12. REMARK 100 THE DEPOSITION ID IS D_1000076303. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-SEP-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00000 REMARK 200 MONOCHROMATOR : DIAMOND(001) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 131858 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.400 REMARK 200 RESOLUTION RANGE LOW (A) : 20.500 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 4.100 REMARK 200 R MERGE (I) : 0.07800 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 11.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.47 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.1 REMARK 200 DATA REDUNDANCY IN SHELL : 4.00 REMARK 200 R MERGE FOR SHELL (I) : 0.28000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 4.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 4I4P REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.23 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.52 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SODIUM CACODYLATE, 0.2 M REMARK 280 MAGNESIUM ACETATE, 20% PEG8000, PH 6.5, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 19.57000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4, 5, 6 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, E, F, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D, H, I REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, F, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 5 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 6 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, H, I REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 5 65.86 -114.24 REMARK 500 ASN A 30 90.69 66.26 REMARK 500 ASN B 30 84.41 67.97 REMARK 500 ASN C 5 62.29 -117.14 REMARK 500 ASN C 30 87.46 66.95 REMARK 500 ASN D 5 65.34 -119.15 REMARK 500 ASN D 30 86.82 64.68 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4I4O RELATED DB: PDB REMARK 900 RELATED ID: 4I4P RELATED DB: PDB REMARK 900 RELATED ID: 4I4Q RELATED DB: PDB REMARK 900 RELATED ID: 4I4R RELATED DB: PDB REMARK 900 RELATED ID: 4I4U RELATED DB: PDB REMARK 900 RELATED ID: 4I4V RELATED DB: PDB REMARK 900 RELATED ID: 4I4X RELATED DB: PDB REMARK 900 RELATED ID: 4I4Y RELATED DB: PDB DBREF 4I4S A 1 146 PDB 4I4S 4I4S 1 146 DBREF 4I4S B 1 146 PDB 4I4S 4I4S 1 146 DBREF 4I4S C 1 146 PDB 4I4S 4I4S 1 146 DBREF 4I4S D 1 146 PDB 4I4S 4I4S 1 146 SEQRES 1 A 146 VAL ASN PHE PRO ASN ILE PRO ALA GLU GLY ALA GLN PHE SEQRES 2 A 146 ARG LEU ARG ALA ARG ASP THR GLY TYR VAL ILE TYR SER SEQRES 3 A 146 ARG THR GLU ASN PRO PRO LEU VAL TRP GLN TYR ASN GLY SEQRES 4 A 146 PRO PRO TYR ASP ASP GLN LEU PHE THR LEU ILE TYR GLY SEQRES 5 A 146 THR GLY PRO HIS GLN ASN LEU TYR ALA ILE LYS SER VAL SEQRES 6 A 146 PRO ASN GLY ARG VAL LEU PHE SER ARG THR SER ALA SER SEQRES 7 A 146 PRO HIS VAL GLY ASN ILE ALA GLY ASP GLY THR TYR ASN SEQRES 8 A 146 ASP ASN TRP PHE GLN PHE ILE GLN ASP ASP ASN ASP PRO SEQRES 9 A 146 ASN SER PHE ARG ILE TYR SER LEU ALA SER ASP THR VAL SEQRES 10 A 146 LEU TYR SER ARG THR THR PRO ASP PRO GLN PHE GLY ASN SEQRES 11 A 146 TYR THR GLY ALA LYS TYR ASP ASP GLN LEU TRP HIS PHE SEQRES 12 A 146 GLU LEU VAL SEQRES 1 B 146 VAL ASN PHE PRO ASN ILE PRO ALA GLU GLY ALA GLN PHE SEQRES 2 B 146 ARG LEU ARG ALA ARG ASP THR GLY TYR VAL ILE TYR SER SEQRES 3 B 146 ARG THR GLU ASN PRO PRO LEU VAL TRP GLN TYR ASN GLY SEQRES 4 B 146 PRO PRO TYR ASP ASP GLN LEU PHE THR LEU ILE TYR GLY SEQRES 5 B 146 THR GLY PRO HIS GLN ASN LEU TYR ALA ILE LYS SER VAL SEQRES 6 B 146 PRO ASN GLY ARG VAL LEU PHE SER ARG THR SER ALA SER SEQRES 7 B 146 PRO HIS VAL GLY ASN ILE ALA GLY ASP GLY THR TYR ASN SEQRES 8 B 146 ASP ASN TRP PHE GLN PHE ILE GLN ASP ASP ASN ASP PRO SEQRES 9 B 146 ASN SER PHE ARG ILE TYR SER LEU ALA SER ASP THR VAL SEQRES 10 B 146 LEU TYR SER ARG THR THR PRO ASP PRO GLN PHE GLY ASN SEQRES 11 B 146 TYR THR GLY ALA LYS TYR ASP ASP GLN LEU TRP HIS PHE SEQRES 12 B 146 GLU LEU VAL SEQRES 1 C 146 VAL ASN PHE PRO ASN ILE PRO ALA GLU GLY ALA GLN PHE SEQRES 2 C 146 ARG LEU ARG ALA ARG ASP THR GLY TYR VAL ILE TYR SER SEQRES 3 C 146 ARG THR GLU ASN PRO PRO LEU VAL TRP GLN TYR ASN GLY SEQRES 4 C 146 PRO PRO TYR ASP ASP GLN LEU PHE THR LEU ILE TYR GLY SEQRES 5 C 146 THR GLY PRO HIS GLN ASN LEU TYR ALA ILE LYS SER VAL SEQRES 6 C 146 PRO ASN GLY ARG VAL LEU PHE SER ARG THR SER ALA SER SEQRES 7 C 146 PRO HIS VAL GLY ASN ILE ALA GLY ASP GLY THR TYR ASN SEQRES 8 C 146 ASP ASN TRP PHE GLN PHE ILE GLN ASP ASP ASN ASP PRO SEQRES 9 C 146 ASN SER PHE ARG ILE TYR SER LEU ALA SER ASP THR VAL SEQRES 10 C 146 LEU TYR SER ARG THR THR PRO ASP PRO GLN PHE GLY ASN SEQRES 11 C 146 TYR THR GLY ALA LYS TYR ASP ASP GLN LEU TRP HIS PHE SEQRES 12 C 146 GLU LEU VAL SEQRES 1 D 146 VAL ASN PHE PRO ASN ILE PRO ALA GLU GLY ALA GLN PHE SEQRES 2 D 146 ARG LEU ARG ALA ARG ASP THR GLY TYR VAL ILE TYR SER SEQRES 3 D 146 ARG THR GLU ASN PRO PRO LEU VAL TRP GLN TYR ASN GLY SEQRES 4 D 146 PRO PRO TYR ASP ASP GLN LEU PHE THR LEU ILE TYR GLY SEQRES 5 D 146 THR GLY PRO HIS GLN ASN LEU TYR ALA ILE LYS SER VAL SEQRES 6 D 146 PRO ASN GLY ARG VAL LEU PHE SER ARG THR SER ALA SER SEQRES 7 D 146 PRO HIS VAL GLY ASN ILE ALA GLY ASP GLY THR TYR ASN SEQRES 8 D 146 ASP ASN TRP PHE GLN PHE ILE GLN ASP ASP ASN ASP PRO SEQRES 9 D 146 ASN SER PHE ARG ILE TYR SER LEU ALA SER ASP THR VAL SEQRES 10 D 146 LEU TYR SER ARG THR THR PRO ASP PRO GLN PHE GLY ASN SEQRES 11 D 146 TYR THR GLY ALA LYS TYR ASP ASP GLN LEU TRP HIS PHE SEQRES 12 D 146 GLU LEU VAL HET BGC E 1 12 HET GAL E 2 11 HET BGC F 1 12 HET GAL F 2 11 HET BGC G 1 12 HET GAL G 2 11 HET BGC H 1 12 HET GAL H 2 11 HET BGC I 1 12 HET GAL I 2 11 HET GOL A 202 6 HET GOL A 203 6 HET GOL A 204 6 HET GOL B 203 6 HET GOL C 201 6 HET GOL C 202 6 HET GOL C 203 6 HET GOL D 203 6 HET GOL D 204 6 HETNAM BGC BETA-D-GLUCOPYRANOSE HETNAM GAL BETA-D-GALACTOPYRANOSE HETNAM GOL GLYCEROL HETSYN BGC BETA-D-GLUCOSE; D-GLUCOSE; GLUCOSE HETSYN GAL BETA-D-GALACTOSE; D-GALACTOSE; GALACTOSE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 5 BGC 5(C6 H12 O6) FORMUL 5 GAL 5(C6 H12 O6) FORMUL 10 GOL 9(C3 H8 O3) FORMUL 19 HOH *747(H2 O) HELIX 1 1 TYR A 42 GLN A 45 5 4 HELIX 2 2 THR A 53 GLN A 57 5 5 HELIX 3 3 TYR A 90 ASN A 93 5 4 HELIX 4 4 TYR A 136 GLN A 139 5 4 HELIX 5 5 TYR B 42 GLN B 45 5 4 HELIX 6 6 THR B 53 GLN B 57 5 5 HELIX 7 7 TYR B 90 ASN B 93 5 4 HELIX 8 8 TYR B 136 GLN B 139 5 4 HELIX 9 9 TYR C 42 GLN C 45 5 4 HELIX 10 10 THR C 53 GLN C 57 5 5 HELIX 11 11 TYR C 90 ASN C 93 5 4 HELIX 12 12 TYR C 136 GLN C 139 5 4 HELIX 13 13 TYR D 42 GLN D 45 5 4 HELIX 14 14 THR D 53 GLN D 57 5 5 HELIX 15 15 TYR D 90 ASN D 93 5 4 HELIX 16 16 TYR D 136 GLN D 139 5 4 SHEET 1 A 2 PHE A 13 ALA A 17 0 SHEET 2 A 2 TRP A 141 LEU A 145 -1 O GLU A 144 N ARG A 14 SHEET 1 B 2 VAL A 23 SER A 26 0 SHEET 2 B 2 VAL A 34 TYR A 37 -1 O TRP A 35 N TYR A 25 SHEET 1 C 2 PHE A 47 TYR A 51 0 SHEET 2 C 2 TYR A 60 SER A 64 -1 O LYS A 63 N THR A 48 SHEET 1 D 2 VAL A 70 SER A 73 0 SHEET 2 D 2 VAL A 81 ILE A 84 -1 O ILE A 84 N VAL A 70 SHEET 1 E 4 PHE A 95 GLN A 99 0 SHEET 2 E 4 PHE A 107 SER A 111 -1 O TYR A 110 N GLN A 96 SHEET 3 E 4 THR A 116 SER A 120 -1 O THR A 116 N SER A 111 SHEET 4 E 4 PHE A 128 TYR A 131 -1 O GLY A 129 N TYR A 119 SHEET 1 F 2 PHE B 13 ALA B 17 0 SHEET 2 F 2 TRP B 141 LEU B 145 -1 O GLU B 144 N ARG B 14 SHEET 1 G 2 VAL B 23 SER B 26 0 SHEET 2 G 2 VAL B 34 TYR B 37 -1 O TYR B 37 N VAL B 23 SHEET 1 H 2 PHE B 47 TYR B 51 0 SHEET 2 H 2 TYR B 60 SER B 64 -1 O LYS B 63 N THR B 48 SHEET 1 I 2 VAL B 70 SER B 73 0 SHEET 2 I 2 VAL B 81 ILE B 84 -1 O ILE B 84 N VAL B 70 SHEET 1 J 4 PHE B 95 GLN B 99 0 SHEET 2 J 4 PHE B 107 SER B 111 -1 O TYR B 110 N GLN B 96 SHEET 3 J 4 THR B 116 SER B 120 -1 O THR B 116 N SER B 111 SHEET 4 J 4 PHE B 128 TYR B 131 -1 O GLY B 129 N TYR B 119 SHEET 1 K 2 PHE C 13 ALA C 17 0 SHEET 2 K 2 TRP C 141 LEU C 145 -1 O GLU C 144 N ARG C 14 SHEET 1 L 2 VAL C 23 SER C 26 0 SHEET 2 L 2 VAL C 34 TYR C 37 -1 O TYR C 37 N VAL C 23 SHEET 1 M 2 PHE C 47 TYR C 51 0 SHEET 2 M 2 TYR C 60 SER C 64 -1 O LYS C 63 N THR C 48 SHEET 1 N 2 VAL C 70 SER C 73 0 SHEET 2 N 2 VAL C 81 ILE C 84 -1 O ILE C 84 N VAL C 70 SHEET 1 O 4 PHE C 95 GLN C 99 0 SHEET 2 O 4 PHE C 107 SER C 111 -1 O TYR C 110 N GLN C 96 SHEET 3 O 4 THR C 116 SER C 120 -1 O THR C 116 N SER C 111 SHEET 4 O 4 PHE C 128 TYR C 131 -1 O GLY C 129 N TYR C 119 SHEET 1 P 2 PHE D 13 ALA D 17 0 SHEET 2 P 2 TRP D 141 LEU D 145 -1 O GLU D 144 N ARG D 14 SHEET 1 Q 2 VAL D 23 SER D 26 0 SHEET 2 Q 2 VAL D 34 TYR D 37 -1 O TYR D 37 N VAL D 23 SHEET 1 R 2 PHE D 47 TYR D 51 0 SHEET 2 R 2 TYR D 60 SER D 64 -1 O LYS D 63 N THR D 48 SHEET 1 S 2 VAL D 70 SER D 73 0 SHEET 2 S 2 VAL D 81 ILE D 84 -1 O ILE D 84 N VAL D 70 SHEET 1 T 4 PHE D 95 GLN D 99 0 SHEET 2 T 4 PHE D 107 SER D 111 -1 O TYR D 110 N GLN D 96 SHEET 3 T 4 THR D 116 SER D 120 -1 O THR D 116 N SER D 111 SHEET 4 T 4 PHE D 128 TYR D 131 -1 O GLY D 129 N TYR D 119 LINK O4 BGC E 1 C1 GAL E 2 1555 1555 1.43 LINK O4 BGC F 1 C1 GAL F 2 1555 1555 1.42 LINK O4 BGC G 1 C1 GAL G 2 1555 1555 1.43 LINK O4 BGC H 1 C1 GAL H 2 1555 1555 1.42 LINK O4 BGC I 1 C1 GAL I 2 1555 1555 1.43 CISPEP 1 PRO A 31 PRO A 32 0 -0.12 CISPEP 2 SER A 78 PRO A 79 0 1.48 CISPEP 3 THR A 123 PRO A 124 0 -6.45 CISPEP 4 ASP A 125 PRO A 126 0 -4.90 CISPEP 5 PRO B 31 PRO B 32 0 1.06 CISPEP 6 SER B 78 PRO B 79 0 -1.65 CISPEP 7 THR B 123 PRO B 124 0 -4.87 CISPEP 8 ASP B 125 PRO B 126 0 -6.28 CISPEP 9 PRO C 31 PRO C 32 0 2.24 CISPEP 10 SER C 78 PRO C 79 0 -0.57 CISPEP 11 THR C 123 PRO C 124 0 -7.46 CISPEP 12 ASP C 125 PRO C 126 0 -5.53 CISPEP 13 PRO D 31 PRO D 32 0 0.56 CISPEP 14 SER D 78 PRO D 79 0 -2.22 CISPEP 15 THR D 123 PRO D 124 0 -5.44 CISPEP 16 ASP D 125 PRO D 126 0 -5.78 CRYST1 72.050 39.140 119.390 90.00 93.16 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013879 0.000000 0.000766 0.00000 SCALE2 0.000000 0.025549 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008389 0.00000