PDB Short entry for 4JHS HEADER SIGNALING PROTEIN 05-MAR-13 4JHS TITLE CRYSTAL STRUCTURE OF A C-TERMINAL TWO DOMAIN FRAGMENT OF HUMAN BETA-2- TITLE 2 GLYCOPROTEIN 1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-2-GLYCOPROTEIN 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: C-TERMINAL TWO DOMAIN FRAGMENT (UNP RESIDUES 203-345); COMPND 5 SYNONYM: APC INHIBITOR, ACTIVATED PROTEIN C-BINDING PROTEIN, COMPND 6 ANTICARDIOLIPIN COFACTOR, APOLIPOPROTEIN H, APO-H, BETA-2- COMPND 7 GLYCOPROTEIN I, B2GPI, BETA(2)GPI; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: APOH, B2G1; SOURCE 6 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BTI-TN-5B1-4; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PIEX KEYWDS STRUCTURAL GENOMICS, GLYCOPROTEIN, PSI-BIOLOGY, NEW YORK STRUCTURAL KEYWDS 2 GENOMICS RESEARCH CONSORTIUM, NYSGRC, ATOMS-TO-ANIMALS: THE IMMUNE KEYWDS 3 FUNCTION NETWORK, IFN, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.B.BONANNO,R.TORO,A.GIZZI,M.K.CHAN,S.C.GARRETT-THOMSON,H.PATEL, AUTHOR 2 S.LIM,B.MATIKAINEN,A.CELIKGIL,S.GARFORTH,B.HILLERICH,R.SEIDEL, AUTHOR 3 J.H.RAND,S.C.ALMO,NEW YORK STRUCTURAL GENOMICS RESEARCH CONSORTIUM AUTHOR 4 (NYSGRC),ATOMS-TO-ANIMALS: THE IMMUNE FUNCTION NETWORK (IFN) REVDAT 3 20-SEP-23 4JHS 1 REMARK SEQADV REVDAT 2 15-NOV-17 4JHS 1 REMARK REVDAT 1 24-APR-13 4JHS 0 JRNL AUTH J.B.BONANNO,R.TORO,A.GIZZI,M.K.CHAN,S.C.GARRETT-THOMSON, JRNL AUTH 2 H.PATEL,S.LIM,B.MATIKAINEN,A.CELIKGIL,S.GARFORTH, JRNL AUTH 3 B.HILLERICH,R.SEIDEL,J.H.RAND,S.C.ALMO JRNL TITL CRYSTAL STRUCTURE OF A C-TERMINAL TWO DOMAIN FRAGMENT OF JRNL TITL 2 HUMAN BETA-2-GLYCOPROTEIN 1 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 6984 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.207 REMARK 3 FREE R VALUE : 0.250 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 331 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.08 REMARK 3 REFLECTION IN BIN (WORKING SET) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2850 REMARK 3 BIN FREE R VALUE SET COUNT : 24 REMARK 3 BIN FREE R VALUE : 0.4210 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1097 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 15 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 70.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 53.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): NULL REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : NULL REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): NULL ; 0.010 ; NULL REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): NULL ; 1.370 ; NULL REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): NULL ; 7.206 ; NULL REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ;37.724 ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ;22.262 ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ;23.261 ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): NULL ; 0.071 ; NULL REMARK 3 GENERAL PLANES REFINED ATOMS (A): NULL ; 0.005 ; NULL REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : NULL REMARK 3 ION PROBE RADIUS : NULL REMARK 3 SHRINKAGE RADIUS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4JHS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-MAR-13. REMARK 100 THE DEPOSITION ID IS D_1000078062. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-JUN-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X29A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97950 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.20 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 7030 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 21.50 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.18000 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 16.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.16 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 21.40 REMARK 200 R MERGE FOR SHELL (I) : 0.81900 REMARK 200 R SYM FOR SHELL (I) : 0.81900 REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 1C1Z REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.86 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.95 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM SODIUM ACETATE TRIHYDRATE PH REMARK 280 4.6, 2.0M AMMONIUM SULFATE, VAPOR DIFFUSION, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 41 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 13555 Y+3/4,X+1/4,-Z+1/4 REMARK 290 14555 -Y+3/4,-X+3/4,-Z+3/4 REMARK 290 15555 Y+1/4,-X+1/4,Z+3/4 REMARK 290 16555 -Y+1/4,X+3/4,Z+1/4 REMARK 290 17555 X+3/4,Z+1/4,-Y+1/4 REMARK 290 18555 -X+1/4,Z+3/4,Y+1/4 REMARK 290 19555 -X+3/4,-Z+3/4,-Y+3/4 REMARK 290 20555 X+1/4,-Z+1/4,Y+3/4 REMARK 290 21555 Z+3/4,Y+1/4,-X+1/4 REMARK 290 22555 Z+1/4,-Y+1/4,X+3/4 REMARK 290 23555 -Z+1/4,Y+3/4,X+1/4 REMARK 290 24555 -Z+3/4,-Y+3/4,-X+3/4 REMARK 290 25555 X+1/2,Y+1/2,Z+1/2 REMARK 290 26555 -X,-Y+1/2,Z REMARK 290 27555 -X+1/2,Y,-Z REMARK 290 28555 X,-Y,-Z+1/2 REMARK 290 29555 Z+1/2,X+1/2,Y+1/2 REMARK 290 30555 Z,-X,-Y+1/2 REMARK 290 31555 -Z,-X+1/2,Y REMARK 290 32555 -Z+1/2,X,-Y REMARK 290 33555 Y+1/2,Z+1/2,X+1/2 REMARK 290 34555 -Y+1/2,Z,-X REMARK 290 35555 Y,-Z,-X+1/2 REMARK 290 36555 -Y,-Z+1/2,X REMARK 290 37555 Y+1/4,X+3/4,-Z+3/4 REMARK 290 38555 -Y+1/4,-X+1/4,-Z+1/4 REMARK 290 39555 Y+3/4,-X+3/4,Z+1/4 REMARK 290 40555 -Y+3/4,X+1/4,Z+3/4 REMARK 290 41555 X+1/4,Z+3/4,-Y+3/4 REMARK 290 42555 -X+3/4,Z+1/4,Y+3/4 REMARK 290 43555 -X+1/4,-Z+1/4,-Y+1/4 REMARK 290 44555 X+3/4,-Z+3/4,Y+1/4 REMARK 290 45555 Z+1/4,Y+3/4,-X+3/4 REMARK 290 46555 Z+3/4,-Y+3/4,X+1/4 REMARK 290 47555 -Z+3/4,Y+1/4,X+3/4 REMARK 290 48555 -Z+1/4,-Y+1/4,-X+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 78.89500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 78.89500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 78.89500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 78.89500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 78.89500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 78.89500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 78.89500 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 78.89500 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 78.89500 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 78.89500 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 78.89500 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 78.89500 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 78.89500 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 78.89500 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 78.89500 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 78.89500 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 78.89500 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 78.89500 REMARK 290 SMTRY1 13 0.000000 1.000000 0.000000 118.34250 REMARK 290 SMTRY2 13 1.000000 0.000000 0.000000 39.44750 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 39.44750 REMARK 290 SMTRY1 14 0.000000 -1.000000 0.000000 118.34250 REMARK 290 SMTRY2 14 -1.000000 0.000000 0.000000 118.34250 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 118.34250 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 39.44750 REMARK 290 SMTRY2 15 -1.000000 0.000000 0.000000 39.44750 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 118.34250 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 39.44750 REMARK 290 SMTRY2 16 1.000000 0.000000 0.000000 118.34250 REMARK 290 SMTRY3 16 0.000000 0.000000 1.000000 39.44750 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 118.34250 REMARK 290 SMTRY2 17 0.000000 0.000000 1.000000 39.44750 REMARK 290 SMTRY3 17 0.000000 -1.000000 0.000000 39.44750 REMARK 290 SMTRY1 18 -1.000000 0.000000 0.000000 39.44750 REMARK 290 SMTRY2 18 0.000000 0.000000 1.000000 118.34250 REMARK 290 SMTRY3 18 0.000000 1.000000 0.000000 39.44750 REMARK 290 SMTRY1 19 -1.000000 0.000000 0.000000 118.34250 REMARK 290 SMTRY2 19 0.000000 0.000000 -1.000000 118.34250 REMARK 290 SMTRY3 19 0.000000 -1.000000 0.000000 118.34250 REMARK 290 SMTRY1 20 1.000000 0.000000 0.000000 39.44750 REMARK 290 SMTRY2 20 0.000000 0.000000 -1.000000 39.44750 REMARK 290 SMTRY3 20 0.000000 1.000000 0.000000 118.34250 REMARK 290 SMTRY1 21 0.000000 0.000000 1.000000 118.34250 REMARK 290 SMTRY2 21 0.000000 1.000000 0.000000 39.44750 REMARK 290 SMTRY3 21 -1.000000 0.000000 0.000000 39.44750 REMARK 290 SMTRY1 22 0.000000 0.000000 1.000000 39.44750 REMARK 290 SMTRY2 22 0.000000 -1.000000 0.000000 39.44750 REMARK 290 SMTRY3 22 1.000000 0.000000 0.000000 118.34250 REMARK 290 SMTRY1 23 0.000000 0.000000 -1.000000 39.44750 REMARK 290 SMTRY2 23 0.000000 1.000000 0.000000 118.34250 REMARK 290 SMTRY3 23 1.000000 0.000000 0.000000 39.44750 REMARK 290 SMTRY1 24 0.000000 0.000000 -1.000000 118.34250 REMARK 290 SMTRY2 24 0.000000 -1.000000 0.000000 118.34250 REMARK 290 SMTRY3 24 -1.000000 0.000000 0.000000 118.34250 REMARK 290 SMTRY1 25 1.000000 0.000000 0.000000 78.89500 REMARK 290 SMTRY2 25 0.000000 1.000000 0.000000 78.89500 REMARK 290 SMTRY3 25 0.000000 0.000000 1.000000 78.89500 REMARK 290 SMTRY1 26 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 26 0.000000 -1.000000 0.000000 78.89500 REMARK 290 SMTRY3 26 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 27 -1.000000 0.000000 0.000000 78.89500 REMARK 290 SMTRY2 27 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 27 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 28 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 28 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 28 0.000000 0.000000 -1.000000 78.89500 REMARK 290 SMTRY1 29 0.000000 0.000000 1.000000 78.89500 REMARK 290 SMTRY2 29 1.000000 0.000000 0.000000 78.89500 REMARK 290 SMTRY3 29 0.000000 1.000000 0.000000 78.89500 REMARK 290 SMTRY1 30 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 30 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 30 0.000000 -1.000000 0.000000 78.89500 REMARK 290 SMTRY1 31 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 31 -1.000000 0.000000 0.000000 78.89500 REMARK 290 SMTRY3 31 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 32 0.000000 0.000000 -1.000000 78.89500 REMARK 290 SMTRY2 32 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 32 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 33 0.000000 1.000000 0.000000 78.89500 REMARK 290 SMTRY2 33 0.000000 0.000000 1.000000 78.89500 REMARK 290 SMTRY3 33 1.000000 0.000000 0.000000 78.89500 REMARK 290 SMTRY1 34 0.000000 -1.000000 0.000000 78.89500 REMARK 290 SMTRY2 34 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 34 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 35 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 35 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 35 -1.000000 0.000000 0.000000 78.89500 REMARK 290 SMTRY1 36 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 36 0.000000 0.000000 -1.000000 78.89500 REMARK 290 SMTRY3 36 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 37 0.000000 1.000000 0.000000 39.44750 REMARK 290 SMTRY2 37 1.000000 0.000000 0.000000 118.34250 REMARK 290 SMTRY3 37 0.000000 0.000000 -1.000000 118.34250 REMARK 290 SMTRY1 38 0.000000 -1.000000 0.000000 39.44750 REMARK 290 SMTRY2 38 -1.000000 0.000000 0.000000 39.44750 REMARK 290 SMTRY3 38 0.000000 0.000000 -1.000000 39.44750 REMARK 290 SMTRY1 39 0.000000 1.000000 0.000000 118.34250 REMARK 290 SMTRY2 39 -1.000000 0.000000 0.000000 118.34250 REMARK 290 SMTRY3 39 0.000000 0.000000 1.000000 39.44750 REMARK 290 SMTRY1 40 0.000000 -1.000000 0.000000 118.34250 REMARK 290 SMTRY2 40 1.000000 0.000000 0.000000 39.44750 REMARK 290 SMTRY3 40 0.000000 0.000000 1.000000 118.34250 REMARK 290 SMTRY1 41 1.000000 0.000000 0.000000 39.44750 REMARK 290 SMTRY2 41 0.000000 0.000000 1.000000 118.34250 REMARK 290 SMTRY3 41 0.000000 -1.000000 0.000000 118.34250 REMARK 290 SMTRY1 42 -1.000000 0.000000 0.000000 118.34250 REMARK 290 SMTRY2 42 0.000000 0.000000 1.000000 39.44750 REMARK 290 SMTRY3 42 0.000000 1.000000 0.000000 118.34250 REMARK 290 SMTRY1 43 -1.000000 0.000000 0.000000 39.44750 REMARK 290 SMTRY2 43 0.000000 0.000000 -1.000000 39.44750 REMARK 290 SMTRY3 43 0.000000 -1.000000 0.000000 39.44750 REMARK 290 SMTRY1 44 1.000000 0.000000 0.000000 118.34250 REMARK 290 SMTRY2 44 0.000000 0.000000 -1.000000 118.34250 REMARK 290 SMTRY3 44 0.000000 1.000000 0.000000 39.44750 REMARK 290 SMTRY1 45 0.000000 0.000000 1.000000 39.44750 REMARK 290 SMTRY2 45 0.000000 1.000000 0.000000 118.34250 REMARK 290 SMTRY3 45 -1.000000 0.000000 0.000000 118.34250 REMARK 290 SMTRY1 46 0.000000 0.000000 1.000000 118.34250 REMARK 290 SMTRY2 46 0.000000 -1.000000 0.000000 118.34250 REMARK 290 SMTRY3 46 1.000000 0.000000 0.000000 39.44750 REMARK 290 SMTRY1 47 0.000000 0.000000 -1.000000 118.34250 REMARK 290 SMTRY2 47 0.000000 1.000000 0.000000 39.44750 REMARK 290 SMTRY3 47 1.000000 0.000000 0.000000 118.34250 REMARK 290 SMTRY1 48 0.000000 0.000000 -1.000000 39.44750 REMARK 290 SMTRY2 48 0.000000 -1.000000 0.000000 39.44750 REMARK 290 SMTRY3 48 -1.000000 0.000000 0.000000 39.44750 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN A 166 REMARK 465 ASP A 167 REMARK 465 TYR A 168 REMARK 465 LYS A 169 REMARK 465 ASP A 170 REMARK 465 ASP A 171 REMARK 465 ASP A 172 REMARK 465 ASP A 173 REMARK 465 LYS A 174 REMARK 465 HIS A 175 REMARK 465 HIS A 176 REMARK 465 HIS A 177 REMARK 465 HIS A 178 REMARK 465 HIS A 179 REMARK 465 HIS A 180 REMARK 465 HIS A 181 REMARK 465 HIS A 182 REMARK 465 HIS A 183 REMARK 465 HIS A 184 REMARK 465 GLU A 185 REMARK 465 ASN A 186 REMARK 465 LEU A 187 REMARK 465 TYR A 188 REMARK 465 PHE A 189 REMARK 465 GLN A 190 REMARK 465 SER A 191 REMARK 465 HIS A 192 REMARK 465 VAL A 193 REMARK 465 LEU A 194 REMARK 465 PHE A 195 REMARK 465 ILE A 196 REMARK 465 PHE A 197 REMARK 465 PRO A 198 REMARK 465 ARG A 199 REMARK 465 THR A 200 REMARK 465 SER A 201 REMARK 465 GLY A 202 REMARK 465 VAL A 203 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 227 CG CD CE NZ REMARK 470 LYS A 250 CG CD CE NZ REMARK 470 LEU A 251 CG CD1 CD2 REMARK 470 GLU A 304 CG CD OE1 OE2 REMARK 470 LYS A 306 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 226 142.69 164.24 REMARK 500 LYS A 227 -8.04 62.17 REMARK 500 SER A 255 -6.65 -58.38 REMARK 500 ALA A 256 178.41 179.10 REMARK 500 MET A 257 86.61 -153.47 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 403 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: NYSGRC-016193 RELATED DB: TARGETTRACK DBREF 4JHS A 203 345 UNP P02749 APOH_HUMAN 203 345 SEQADV 4JHS GLN A 166 UNP P02749 EXPRESSION TAG SEQADV 4JHS ASP A 167 UNP P02749 EXPRESSION TAG SEQADV 4JHS TYR A 168 UNP P02749 EXPRESSION TAG SEQADV 4JHS LYS A 169 UNP P02749 EXPRESSION TAG SEQADV 4JHS ASP A 170 UNP P02749 EXPRESSION TAG SEQADV 4JHS ASP A 171 UNP P02749 EXPRESSION TAG SEQADV 4JHS ASP A 172 UNP P02749 EXPRESSION TAG SEQADV 4JHS ASP A 173 UNP P02749 EXPRESSION TAG SEQADV 4JHS LYS A 174 UNP P02749 EXPRESSION TAG SEQADV 4JHS HIS A 175 UNP P02749 EXPRESSION TAG SEQADV 4JHS HIS A 176 UNP P02749 EXPRESSION TAG SEQADV 4JHS HIS A 177 UNP P02749 EXPRESSION TAG SEQADV 4JHS HIS A 178 UNP P02749 EXPRESSION TAG SEQADV 4JHS HIS A 179 UNP P02749 EXPRESSION TAG SEQADV 4JHS HIS A 180 UNP P02749 EXPRESSION TAG SEQADV 4JHS HIS A 181 UNP P02749 EXPRESSION TAG SEQADV 4JHS HIS A 182 UNP P02749 EXPRESSION TAG SEQADV 4JHS HIS A 183 UNP P02749 EXPRESSION TAG SEQADV 4JHS HIS A 184 UNP P02749 EXPRESSION TAG SEQADV 4JHS GLU A 185 UNP P02749 EXPRESSION TAG SEQADV 4JHS ASN A 186 UNP P02749 EXPRESSION TAG SEQADV 4JHS LEU A 187 UNP P02749 EXPRESSION TAG SEQADV 4JHS TYR A 188 UNP P02749 EXPRESSION TAG SEQADV 4JHS PHE A 189 UNP P02749 EXPRESSION TAG SEQADV 4JHS GLN A 190 UNP P02749 EXPRESSION TAG SEQADV 4JHS SER A 191 UNP P02749 EXPRESSION TAG SEQADV 4JHS HIS A 192 UNP P02749 EXPRESSION TAG SEQADV 4JHS VAL A 193 UNP P02749 EXPRESSION TAG SEQADV 4JHS LEU A 194 UNP P02749 EXPRESSION TAG SEQADV 4JHS PHE A 195 UNP P02749 EXPRESSION TAG SEQADV 4JHS ILE A 196 UNP P02749 EXPRESSION TAG SEQADV 4JHS PHE A 197 UNP P02749 EXPRESSION TAG SEQADV 4JHS PRO A 198 UNP P02749 EXPRESSION TAG SEQADV 4JHS ARG A 199 UNP P02749 EXPRESSION TAG SEQADV 4JHS THR A 200 UNP P02749 EXPRESSION TAG SEQADV 4JHS SER A 201 UNP P02749 EXPRESSION TAG SEQADV 4JHS GLY A 202 UNP P02749 EXPRESSION TAG SEQRES 1 A 180 GLN ASP TYR LYS ASP ASP ASP ASP LYS HIS HIS HIS HIS SEQRES 2 A 180 HIS HIS HIS HIS HIS HIS GLU ASN LEU TYR PHE GLN SER SEQRES 3 A 180 HIS VAL LEU PHE ILE PHE PRO ARG THR SER GLY VAL LYS SEQRES 4 A 180 CYS PRO PHE PRO SER ARG PRO ASP ASN GLY PHE VAL ASN SEQRES 5 A 180 TYR PRO ALA LYS PRO THR LEU TYR TYR LYS ASP LYS ALA SEQRES 6 A 180 THR PHE GLY CYS HIS ASP GLY TYR SER LEU ASP GLY PRO SEQRES 7 A 180 GLU GLU ILE GLU CYS THR LYS LEU GLY ASN TRP SER ALA SEQRES 8 A 180 MET PRO SER CYS LYS ALA SER CYS LYS VAL PRO VAL LYS SEQRES 9 A 180 LYS ALA THR VAL VAL TYR GLN GLY GLU ARG VAL LYS ILE SEQRES 10 A 180 GLN GLU LYS PHE LYS ASN GLY MET LEU HIS GLY ASP LYS SEQRES 11 A 180 VAL SER PHE PHE CYS LYS ASN LYS GLU LYS LYS CYS SER SEQRES 12 A 180 TYR THR GLU ASP ALA GLN CYS ILE ASP GLY THR ILE GLU SEQRES 13 A 180 VAL PRO LYS CYS PHE LYS GLU HIS SER SER LEU ALA PHE SEQRES 14 A 180 TRP LYS THR ASP ALA SER ASP VAL LYS PRO CYS HET SO4 A 401 5 HET SO4 A 402 5 HET SO4 A 403 5 HETNAM SO4 SULFATE ION FORMUL 2 SO4 3(O4 S 2-) HELIX 1 1 ILE A 282 PHE A 286 1 5 HELIX 2 2 ASP A 338 VAL A 342 5 5 SHEET 1 A 3 GLY A 214 ASN A 217 0 SHEET 2 A 3 LYS A 229 CYS A 234 -1 O GLY A 233 N PHE A 215 SHEET 3 A 3 GLU A 245 GLU A 247 -1 O ILE A 246 N ALA A 230 SHEET 1 B 2 TYR A 238 ASP A 241 0 SHEET 2 B 2 SER A 259 ALA A 262 -1 O SER A 259 N ASP A 241 SHEET 1 C 4 GLU A 278 LYS A 281 0 SHEET 2 C 4 THR A 272 TYR A 275 -1 N VAL A 273 O VAL A 280 SHEET 3 C 4 LYS A 295 ASN A 302 -1 O SER A 297 N VAL A 274 SHEET 4 C 4 CYS A 307 GLN A 314 -1 O TYR A 309 N CYS A 300 SSBOND 1 CYS A 205 CYS A 248 1555 1555 2.04 SSBOND 2 CYS A 234 CYS A 260 1555 1555 2.07 SSBOND 3 CYS A 264 CYS A 315 1555 1555 2.05 SSBOND 4 CYS A 300 CYS A 325 1555 1555 2.09 SSBOND 5 CYS A 307 CYS A 345 1555 1555 2.05 SITE 1 AC1 4 LYS A 301 LYS A 303 HIS A 329 LYS A 336 SITE 1 AC2 5 LYS A 301 LYS A 303 TRP A 335 LYS A 336 SITE 2 AC2 5 THR A 337 SITE 1 AC3 3 ARG A 210 ASN A 213 HIS A 235 CRYST1 157.790 157.790 157.790 90.00 90.00 90.00 I 41 3 2 48 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006338 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006338 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006338 0.00000