PDB Short entry for 4JJT HEADER LYASE 08-MAR-13 4JJT TITLE THE CRYSTAL STRUCTURE OF ENOYL-COA HYDRATASE FROM MYCOBACTERIUM TITLE 2 TUBERCULOSIS H37RV COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENOYL-COA HYDRATASE; COMPND 3 CHAIN: A, B, C; COMPND 4 EC: 4.2.1.17; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 83332; SOURCE 4 STRAIN: H37RV; SOURCE 5 GENE: MYCOBACTERIUM TUBERCULOSIS, RVBD_2831; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)MAGIC; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG68 KEYWDS STRUCTURAL GENOMICS, PSI-BIOLOGY, PROTEIN STRUCTURE INITIATIVE, KEYWDS 2 MIDWEST CENTER FOR STRUCTURAL GENOMICS, MCSG, STRUCTURES OF MTB KEYWDS 3 PROTEINS CONFERRING SUSCEPTIBILITY TO KNOWN MTB INHIBITORS, MTBI, KEYWDS 4 LYASE EXPDTA X-RAY DIFFRACTION AUTHOR K.TAN,J.HOLOWICKI,M.ENDRES,C.-Y.KIM,H.KIM,L.-W.HUNG,T.C.TERWILLIGER, AUTHOR 2 A.JOACHIMIAK,MIDWEST CENTER FOR STRUCTURAL GENOMICS (MCSG), AUTHOR 3 STRUCTURES OF MTB PROTEINS CONFERRING SUSCEPTIBILITY TO KNOWN MTB AUTHOR 4 INHIBITORS (MTBI) REVDAT 3 06-DEC-23 4JJT 1 REMARK REVDAT 2 20-SEP-23 4JJT 1 REMARK SEQADV LINK REVDAT 1 27-MAR-13 4JJT 0 JRNL AUTH K.TAN,J.HOLOWICKI,M.ENDRES,C.-Y.KIM,H.KIM,L.-W.HUNG, JRNL AUTH 2 T.C.TERWILLIGER,A.JOACHIMIAK JRNL TITL THE CRYSTAL STRUCTURE OF ENOYL-COA HYDRATASE FROM JRNL TITL 2 MYCOBACTERIUM TUBERCULOSIS H37RV JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.1_1168) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.45 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.7 REMARK 3 NUMBER OF REFLECTIONS : 24425 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.182 REMARK 3 R VALUE (WORKING SET) : 0.180 REMARK 3 FREE R VALUE : 0.227 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.070 REMARK 3 FREE R VALUE TEST SET COUNT : 1238 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.4499 - 5.1879 0.87 2389 121 0.1768 0.1760 REMARK 3 2 5.1879 - 4.1191 0.89 2417 129 0.1472 0.1977 REMARK 3 3 4.1191 - 3.5988 0.95 2554 139 0.1548 0.2142 REMARK 3 4 3.5988 - 3.2699 0.98 2629 134 0.1754 0.2204 REMARK 3 5 3.2699 - 3.0356 0.99 2650 150 0.1971 0.2643 REMARK 3 6 3.0356 - 2.8567 0.99 2660 130 0.2160 0.3065 REMARK 3 7 2.8567 - 2.7137 0.99 2632 149 0.2226 0.2715 REMARK 3 8 2.7137 - 2.5956 0.99 2661 131 0.2241 0.3115 REMARK 3 9 2.5956 - 2.4957 0.96 2595 155 0.2288 0.2698 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.010 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 5107 REMARK 3 ANGLE : 0.667 6952 REMARK 3 CHIRALITY : 0.044 842 REMARK 3 PLANARITY : 0.003 904 REMARK 3 DIHEDRAL : 13.036 1823 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 4 THROUGH 88 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.3140 -50.6183 17.4440 REMARK 3 T TENSOR REMARK 3 T11: 0.2480 T22: 0.2551 REMARK 3 T33: 0.2337 T12: 0.0930 REMARK 3 T13: 0.0163 T23: 0.0420 REMARK 3 L TENSOR REMARK 3 L11: 4.7750 L22: 5.6676 REMARK 3 L33: 4.1545 L12: 1.0061 REMARK 3 L13: 1.6228 L23: 1.2546 REMARK 3 S TENSOR REMARK 3 S11: 0.2143 S12: -0.1505 S13: -0.4141 REMARK 3 S21: 0.2573 S22: -0.0956 S23: -0.1144 REMARK 3 S31: 0.3017 S32: 0.1118 S33: -0.1029 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 89 THROUGH 236 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.7221 -39.2644 15.5474 REMARK 3 T TENSOR REMARK 3 T11: 0.2455 T22: 0.1767 REMARK 3 T33: 0.2067 T12: 0.0354 REMARK 3 T13: -0.0008 T23: -0.0154 REMARK 3 L TENSOR REMARK 3 L11: 3.8016 L22: 1.1884 REMARK 3 L33: 2.2608 L12: 0.2774 REMARK 3 L13: -0.7132 L23: 0.0012 REMARK 3 S TENSOR REMARK 3 S11: 0.0212 S12: 0.1173 S13: -0.1155 REMARK 3 S21: -0.1236 S22: -0.0690 S23: 0.0521 REMARK 3 S31: 0.1330 S32: -0.0982 S33: 0.0431 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 4 THROUGH 45 ) REMARK 3 ORIGIN FOR THE GROUP (A): -51.4970 -23.9268 10.6687 REMARK 3 T TENSOR REMARK 3 T11: 0.3242 T22: 0.4802 REMARK 3 T33: 0.3633 T12: 0.0432 REMARK 3 T13: 0.0173 T23: 0.0200 REMARK 3 L TENSOR REMARK 3 L11: 3.7073 L22: 6.2641 REMARK 3 L33: 3.4843 L12: -1.6953 REMARK 3 L13: 0.5515 L23: -2.5319 REMARK 3 S TENSOR REMARK 3 S11: 0.2990 S12: 0.2493 S13: -0.1227 REMARK 3 S21: -0.3602 S22: -0.0171 S23: 0.3812 REMARK 3 S31: -0.0900 S32: -0.3571 S33: -0.3046 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 46 THROUGH 56 ) REMARK 3 ORIGIN FOR THE GROUP (A): -47.8445 -34.4089 11.6869 REMARK 3 T TENSOR REMARK 3 T11: 0.3516 T22: 0.3887 REMARK 3 T33: 0.3509 T12: 0.0445 REMARK 3 T13: 0.0825 T23: 0.0057 REMARK 3 L TENSOR REMARK 3 L11: 9.6957 L22: 4.4607 REMARK 3 L33: 5.4004 L12: -3.7729 REMARK 3 L13: 3.0322 L23: 1.8495 REMARK 3 S TENSOR REMARK 3 S11: 0.0457 S12: -0.3082 S13: -0.8641 REMARK 3 S21: 1.1671 S22: -0.0817 S23: 0.9822 REMARK 3 S31: 0.4092 S32: -0.2846 S33: 0.0665 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 57 THROUGH 144 ) REMARK 3 ORIGIN FOR THE GROUP (A): -39.3647 -17.7596 12.5634 REMARK 3 T TENSOR REMARK 3 T11: 0.2934 T22: 0.3347 REMARK 3 T33: 0.2704 T12: 0.0996 REMARK 3 T13: 0.0053 T23: 0.0197 REMARK 3 L TENSOR REMARK 3 L11: 2.1136 L22: 2.1697 REMARK 3 L33: 1.6165 L12: 0.7363 REMARK 3 L13: 0.3775 L23: 0.3921 REMARK 3 S TENSOR REMARK 3 S11: 0.0098 S12: 0.2255 S13: 0.1968 REMARK 3 S21: -0.0671 S22: -0.0660 S23: 0.3188 REMARK 3 S31: -0.2560 S32: -0.2044 S33: 0.0556 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 145 THROUGH 229 ) REMARK 3 ORIGIN FOR THE GROUP (A): -33.7835 -24.3797 13.5850 REMARK 3 T TENSOR REMARK 3 T11: 0.1568 T22: 0.2913 REMARK 3 T33: 0.2060 T12: 0.0790 REMARK 3 T13: -0.0213 T23: 0.0115 REMARK 3 L TENSOR REMARK 3 L11: 1.2234 L22: 2.5447 REMARK 3 L33: 1.9289 L12: 0.2788 REMARK 3 L13: 0.1367 L23: -0.0225 REMARK 3 S TENSOR REMARK 3 S11: 0.0666 S12: 0.1242 S13: -0.0248 REMARK 3 S21: -0.1397 S22: -0.0894 S23: 0.1082 REMARK 3 S31: -0.1102 S32: -0.1278 S33: -0.0014 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 4 THROUGH 45 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.0193 0.1296 16.7001 REMARK 3 T TENSOR REMARK 3 T11: 0.5117 T22: 0.1859 REMARK 3 T33: 0.5194 T12: -0.0279 REMARK 3 T13: 0.1209 T23: -0.0386 REMARK 3 L TENSOR REMARK 3 L11: 8.2484 L22: 2.5240 REMARK 3 L33: 2.5805 L12: -2.3719 REMARK 3 L13: 0.1123 L23: 0.1055 REMARK 3 S TENSOR REMARK 3 S11: 0.2933 S12: 0.0840 S13: 0.9084 REMARK 3 S21: -0.3110 S22: -0.1055 S23: -0.4383 REMARK 3 S31: -0.5169 S32: 0.1239 S33: -0.1348 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 46 THROUGH 144 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.6063 -11.7706 16.4854 REMARK 3 T TENSOR REMARK 3 T11: 0.2412 T22: 0.2362 REMARK 3 T33: 0.2848 T12: -0.0124 REMARK 3 T13: 0.0486 T23: 0.0058 REMARK 3 L TENSOR REMARK 3 L11: 2.9586 L22: 3.8468 REMARK 3 L33: 3.6213 L12: -0.4699 REMARK 3 L13: 0.3410 L23: -0.7038 REMARK 3 S TENSOR REMARK 3 S11: -0.0494 S12: 0.0135 S13: 0.3722 REMARK 3 S21: -0.1092 S22: 0.0730 S23: -0.2528 REMARK 3 S31: -0.3215 S32: 0.0833 S33: -0.0271 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 145 THROUGH 193 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.4994 -14.6788 7.2042 REMARK 3 T TENSOR REMARK 3 T11: 0.3377 T22: 0.2936 REMARK 3 T33: 0.2399 T12: -0.0165 REMARK 3 T13: 0.0506 T23: 0.0165 REMARK 3 L TENSOR REMARK 3 L11: 2.6596 L22: 3.0399 REMARK 3 L33: 2.3165 L12: -1.1402 REMARK 3 L13: -0.3894 L23: -0.3133 REMARK 3 S TENSOR REMARK 3 S11: 0.2367 S12: 0.4163 S13: 0.2344 REMARK 3 S21: -0.8184 S22: -0.0821 S23: -0.1090 REMARK 3 S31: -0.0430 S32: -0.0869 S33: -0.0878 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 194 THROUGH 232 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.9906 -16.3374 28.1759 REMARK 3 T TENSOR REMARK 3 T11: 0.2530 T22: 0.2811 REMARK 3 T33: 0.1146 T12: -0.0752 REMARK 3 T13: 0.0344 T23: -0.0876 REMARK 3 L TENSOR REMARK 3 L11: 4.4761 L22: 4.0981 REMARK 3 L33: 2.9386 L12: -2.3412 REMARK 3 L13: 0.4627 L23: -1.4948 REMARK 3 S TENSOR REMARK 3 S11: -0.0772 S12: -0.5910 S13: 0.1222 REMARK 3 S21: 0.2028 S22: 0.1974 S23: -0.1518 REMARK 3 S31: -0.1000 S32: 0.1917 S33: 0.0065 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4JJT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-MAR-13. REMARK 100 THE DEPOSITION ID IS D_1000078135. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-FEB-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97929 REMARK 200 MONOCHROMATOR : SI 111 CRYSTAL REMARK 200 OPTICS : MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24439 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 40.500 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.0 REMARK 200 DATA REDUNDANCY : 2.700 REMARK 200 R MERGE (I) : 0.11800 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 18.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.54 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.4 REMARK 200 DATA REDUNDANCY IN SHELL : 2.70 REMARK 200 R MERGE FOR SHELL (I) : 0.56300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY: 3P85 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.09 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.28 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M SODIUM CITRATE, 20% (W/V) REMARK 280 PEG4000, 5% (V/V) 2-PROPANOL, PH 7.0, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 297K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 65.15900 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 43.43700 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 65.15900 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 43.43700 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 20990 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 47150 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -137.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -47.60819 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 65.47897 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 450 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 ALA A 0 REMARK 465 MSE A 1 REMARK 465 THR A 2 REMARK 465 ASP A 3 REMARK 465 ALA A 71 REMARK 465 GLY A 72 REMARK 465 GLN A 73 REMARK 465 THR A 74 REMARK 465 ARG A 237 REMARK 465 GLU A 238 REMARK 465 ALA A 239 REMARK 465 VAL A 240 REMARK 465 LEU A 241 REMARK 465 GLN A 242 REMARK 465 ARG A 243 REMARK 465 GLY A 244 REMARK 465 ARG A 245 REMARK 465 ALA A 246 REMARK 465 GLN A 247 REMARK 465 VAL A 248 REMARK 465 ARG A 249 REMARK 465 SER B -2 REMARK 465 ASN B -1 REMARK 465 ALA B 0 REMARK 465 MSE B 1 REMARK 465 THR B 2 REMARK 465 ASP B 3 REMARK 465 THR B 74 REMARK 465 ALA B 75 REMARK 465 LEU B 76 REMARK 465 PRO B 77 REMARK 465 ASP B 78 REMARK 465 GLY B 230 REMARK 465 ASP B 231 REMARK 465 THR B 232 REMARK 465 ILE B 233 REMARK 465 ALA B 234 REMARK 465 ALA B 235 REMARK 465 ASN B 236 REMARK 465 ARG B 237 REMARK 465 GLU B 238 REMARK 465 ALA B 239 REMARK 465 VAL B 240 REMARK 465 LEU B 241 REMARK 465 GLN B 242 REMARK 465 ARG B 243 REMARK 465 GLY B 244 REMARK 465 ARG B 245 REMARK 465 ALA B 246 REMARK 465 GLN B 247 REMARK 465 VAL B 248 REMARK 465 ARG B 249 REMARK 465 SER C -2 REMARK 465 ASN C -1 REMARK 465 ALA C 0 REMARK 465 MSE C 1 REMARK 465 THR C 2 REMARK 465 ASP C 3 REMARK 465 ALA C 71 REMARK 465 GLY C 72 REMARK 465 GLN C 73 REMARK 465 THR C 74 REMARK 465 ALA C 75 REMARK 465 LEU C 76 REMARK 465 PRO C 77 REMARK 465 ASP C 78 REMARK 465 ILE C 233 REMARK 465 ALA C 234 REMARK 465 ALA C 235 REMARK 465 ASN C 236 REMARK 465 ARG C 237 REMARK 465 GLU C 238 REMARK 465 ALA C 239 REMARK 465 VAL C 240 REMARK 465 LEU C 241 REMARK 465 GLN C 242 REMARK 465 ARG C 243 REMARK 465 GLY C 244 REMARK 465 ARG C 245 REMARK 465 ALA C 246 REMARK 465 GLN C 247 REMARK 465 VAL C 248 REMARK 465 ARG C 249 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 68 CG CD CE NZ REMARK 470 LYS B 68 CG CD CE NZ REMARK 470 ASP C 47 CG OD1 OD2 REMARK 470 LYS C 68 CG CD CE NZ REMARK 470 LEU C 70 CG CD1 CD2 REMARK 470 ARG C 206 CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 100 -100.38 58.98 REMARK 500 THR B 100 -100.81 58.18 REMARK 500 CYS C 62 120.17 -171.08 REMARK 500 THR C 100 -98.43 57.62 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL C 301 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: MCSG-APC107486 RELATED DB: TARGETTRACK DBREF 4JJT A 1 249 UNP I6YEH6 I6YEH6_MYCTU 1 249 DBREF 4JJT B 1 249 UNP I6YEH6 I6YEH6_MYCTU 1 249 DBREF 4JJT C 1 249 UNP I6YEH6 I6YEH6_MYCTU 1 249 SEQADV 4JJT SER A -2 UNP I6YEH6 EXPRESSION TAG SEQADV 4JJT ASN A -1 UNP I6YEH6 EXPRESSION TAG SEQADV 4JJT ALA A 0 UNP I6YEH6 EXPRESSION TAG SEQADV 4JJT SER B -2 UNP I6YEH6 EXPRESSION TAG SEQADV 4JJT ASN B -1 UNP I6YEH6 EXPRESSION TAG SEQADV 4JJT ALA B 0 UNP I6YEH6 EXPRESSION TAG SEQADV 4JJT SER C -2 UNP I6YEH6 EXPRESSION TAG SEQADV 4JJT ASN C -1 UNP I6YEH6 EXPRESSION TAG SEQADV 4JJT ALA C 0 UNP I6YEH6 EXPRESSION TAG SEQRES 1 A 252 SER ASN ALA MSE THR ASP ASP ILE LEU LEU ILE ASP THR SEQRES 2 A 252 ASP GLU ARG VAL ARG THR LEU THR LEU ASN ARG PRO GLN SEQRES 3 A 252 SER ARG ASN ALA LEU SER ALA ALA LEU ARG ASP ARG PHE SEQRES 4 A 252 PHE ALA ALA LEU ALA ASP ALA GLU ALA ASP ASP ASP ILE SEQRES 5 A 252 ASP VAL VAL ILE LEU THR GLY ALA ASP PRO VAL PHE CYS SEQRES 6 A 252 ALA GLY LEU ASP LEU LYS GLU LEU ALA GLY GLN THR ALA SEQRES 7 A 252 LEU PRO ASP ILE SER PRO ARG TRP PRO ALA MSE THR LYS SEQRES 8 A 252 PRO VAL ILE GLY ALA ILE ASN GLY ALA ALA VAL THR GLY SEQRES 9 A 252 GLY LEU GLU LEU ALA LEU TYR CYS ASP ILE LEU ILE ALA SEQRES 10 A 252 SER GLU HIS ALA ARG PHE ALA ASP THR HIS ALA ARG VAL SEQRES 11 A 252 GLY LEU LEU PRO THR TRP GLY LEU SER VAL ARG LEU PRO SEQRES 12 A 252 GLN LYS VAL GLY ILE GLY LEU ALA ARG ARG MSE SER LEU SEQRES 13 A 252 THR GLY ASP TYR LEU SER ALA THR ASP ALA LEU ARG ALA SEQRES 14 A 252 GLY LEU VAL THR GLU VAL VAL ALA HIS ASP GLN LEU LEU SEQRES 15 A 252 PRO THR ALA ARG ARG VAL ALA ALA SER ILE VAL GLY ASN SEQRES 16 A 252 ASN GLN ASN ALA VAL ARG ALA LEU LEU ALA SER TYR HIS SEQRES 17 A 252 ARG ILE ASP GLU SER GLN THR ALA ALA GLY LEU TRP LEU SEQRES 18 A 252 GLU ALA CYS ALA ALA LYS GLN PHE ARG THR SER GLY ASP SEQRES 19 A 252 THR ILE ALA ALA ASN ARG GLU ALA VAL LEU GLN ARG GLY SEQRES 20 A 252 ARG ALA GLN VAL ARG SEQRES 1 B 252 SER ASN ALA MSE THR ASP ASP ILE LEU LEU ILE ASP THR SEQRES 2 B 252 ASP GLU ARG VAL ARG THR LEU THR LEU ASN ARG PRO GLN SEQRES 3 B 252 SER ARG ASN ALA LEU SER ALA ALA LEU ARG ASP ARG PHE SEQRES 4 B 252 PHE ALA ALA LEU ALA ASP ALA GLU ALA ASP ASP ASP ILE SEQRES 5 B 252 ASP VAL VAL ILE LEU THR GLY ALA ASP PRO VAL PHE CYS SEQRES 6 B 252 ALA GLY LEU ASP LEU LYS GLU LEU ALA GLY GLN THR ALA SEQRES 7 B 252 LEU PRO ASP ILE SER PRO ARG TRP PRO ALA MSE THR LYS SEQRES 8 B 252 PRO VAL ILE GLY ALA ILE ASN GLY ALA ALA VAL THR GLY SEQRES 9 B 252 GLY LEU GLU LEU ALA LEU TYR CYS ASP ILE LEU ILE ALA SEQRES 10 B 252 SER GLU HIS ALA ARG PHE ALA ASP THR HIS ALA ARG VAL SEQRES 11 B 252 GLY LEU LEU PRO THR TRP GLY LEU SER VAL ARG LEU PRO SEQRES 12 B 252 GLN LYS VAL GLY ILE GLY LEU ALA ARG ARG MSE SER LEU SEQRES 13 B 252 THR GLY ASP TYR LEU SER ALA THR ASP ALA LEU ARG ALA SEQRES 14 B 252 GLY LEU VAL THR GLU VAL VAL ALA HIS ASP GLN LEU LEU SEQRES 15 B 252 PRO THR ALA ARG ARG VAL ALA ALA SER ILE VAL GLY ASN SEQRES 16 B 252 ASN GLN ASN ALA VAL ARG ALA LEU LEU ALA SER TYR HIS SEQRES 17 B 252 ARG ILE ASP GLU SER GLN THR ALA ALA GLY LEU TRP LEU SEQRES 18 B 252 GLU ALA CYS ALA ALA LYS GLN PHE ARG THR SER GLY ASP SEQRES 19 B 252 THR ILE ALA ALA ASN ARG GLU ALA VAL LEU GLN ARG GLY SEQRES 20 B 252 ARG ALA GLN VAL ARG SEQRES 1 C 252 SER ASN ALA MSE THR ASP ASP ILE LEU LEU ILE ASP THR SEQRES 2 C 252 ASP GLU ARG VAL ARG THR LEU THR LEU ASN ARG PRO GLN SEQRES 3 C 252 SER ARG ASN ALA LEU SER ALA ALA LEU ARG ASP ARG PHE SEQRES 4 C 252 PHE ALA ALA LEU ALA ASP ALA GLU ALA ASP ASP ASP ILE SEQRES 5 C 252 ASP VAL VAL ILE LEU THR GLY ALA ASP PRO VAL PHE CYS SEQRES 6 C 252 ALA GLY LEU ASP LEU LYS GLU LEU ALA GLY GLN THR ALA SEQRES 7 C 252 LEU PRO ASP ILE SER PRO ARG TRP PRO ALA MSE THR LYS SEQRES 8 C 252 PRO VAL ILE GLY ALA ILE ASN GLY ALA ALA VAL THR GLY SEQRES 9 C 252 GLY LEU GLU LEU ALA LEU TYR CYS ASP ILE LEU ILE ALA SEQRES 10 C 252 SER GLU HIS ALA ARG PHE ALA ASP THR HIS ALA ARG VAL SEQRES 11 C 252 GLY LEU LEU PRO THR TRP GLY LEU SER VAL ARG LEU PRO SEQRES 12 C 252 GLN LYS VAL GLY ILE GLY LEU ALA ARG ARG MSE SER LEU SEQRES 13 C 252 THR GLY ASP TYR LEU SER ALA THR ASP ALA LEU ARG ALA SEQRES 14 C 252 GLY LEU VAL THR GLU VAL VAL ALA HIS ASP GLN LEU LEU SEQRES 15 C 252 PRO THR ALA ARG ARG VAL ALA ALA SER ILE VAL GLY ASN SEQRES 16 C 252 ASN GLN ASN ALA VAL ARG ALA LEU LEU ALA SER TYR HIS SEQRES 17 C 252 ARG ILE ASP GLU SER GLN THR ALA ALA GLY LEU TRP LEU SEQRES 18 C 252 GLU ALA CYS ALA ALA LYS GLN PHE ARG THR SER GLY ASP SEQRES 19 C 252 THR ILE ALA ALA ASN ARG GLU ALA VAL LEU GLN ARG GLY SEQRES 20 C 252 ARG ALA GLN VAL ARG MODRES 4JJT MSE A 86 MET SELENOMETHIONINE MODRES 4JJT MSE A 151 MET SELENOMETHIONINE MODRES 4JJT MSE B 86 MET SELENOMETHIONINE MODRES 4JJT MSE B 151 MET SELENOMETHIONINE MODRES 4JJT MSE C 86 MET SELENOMETHIONINE MODRES 4JJT MSE C 151 MET SELENOMETHIONINE HET MSE A 86 8 HET MSE A 151 8 HET MSE B 86 8 HET MSE B 151 8 HET MSE C 86 8 HET MSE C 151 8 HET GOL A 301 6 HET GOL B 301 6 HET ACT B 302 4 HET GOL C 301 6 HETNAM MSE SELENOMETHIONINE HETNAM GOL GLYCEROL HETNAM ACT ACETATE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 MSE 6(C5 H11 N O2 SE) FORMUL 4 GOL 3(C3 H8 O3) FORMUL 6 ACT C2 H3 O2 1- FORMUL 8 HOH *188(H2 O) HELIX 1 1 ARG A 21 ARG A 25 5 5 HELIX 2 2 SER A 29 ASP A 46 1 18 HELIX 3 3 THR A 100 CYS A 109 1 10 HELIX 4 4 THR A 123 GLY A 128 1 6 HELIX 5 5 GLY A 134 GLY A 144 1 11 HELIX 6 6 GLY A 144 GLY A 155 1 12 HELIX 7 7 ALA A 160 ALA A 166 1 7 HELIX 8 8 ALA A 174 ASP A 176 5 3 HELIX 9 9 GLN A 177 GLY A 191 1 15 HELIX 10 10 ASN A 193 ALA A 235 1 43 HELIX 11 11 ARG B 21 ARG B 25 5 5 HELIX 12 12 SER B 29 ASP B 46 1 18 HELIX 13 13 ASP B 66 ALA B 71 1 6 HELIX 14 14 THR B 100 CYS B 109 1 10 HELIX 15 15 GLY B 134 GLY B 144 1 11 HELIX 16 16 GLY B 144 GLY B 155 1 12 HELIX 17 17 ALA B 160 ALA B 166 1 7 HELIX 18 18 ALA B 174 ASP B 176 5 3 HELIX 19 19 GLN B 177 ASN B 192 1 16 HELIX 20 20 ASN B 193 SER B 229 1 37 HELIX 21 21 ARG C 21 ARG C 25 5 5 HELIX 22 22 SER C 29 ASP C 46 1 18 HELIX 23 23 THR C 100 CYS C 109 1 10 HELIX 24 24 THR C 123 GLY C 128 1 6 HELIX 25 25 GLY C 134 GLY C 144 1 11 HELIX 26 26 GLY C 144 GLY C 155 1 12 HELIX 27 27 SER C 159 ALA C 166 1 8 HELIX 28 28 ALA C 174 ASP C 176 5 3 HELIX 29 29 GLN C 177 GLY C 191 1 15 HELIX 30 30 ASN C 193 THR C 232 1 40 SHEET 1 A 6 LEU A 6 ASP A 11 0 SHEET 2 A 6 VAL A 14 LEU A 19 -1 O THR A 18 N LEU A 7 SHEET 3 A 6 VAL A 51 GLY A 56 1 O ILE A 53 N LEU A 17 SHEET 4 A 6 VAL A 90 ILE A 94 1 O ILE A 91 N VAL A 52 SHEET 5 A 6 ILE A 111 SER A 115 1 O ILE A 111 N GLY A 92 SHEET 6 A 6 GLU A 171 VAL A 173 1 O GLU A 171 N ALA A 114 SHEET 1 B 3 ALA A 97 VAL A 99 0 SHEET 2 B 3 ARG A 119 ALA A 121 1 O ARG A 119 N ALA A 98 SHEET 3 B 3 LEU A 158 SER A 159 -1 O LEU A 158 N PHE A 120 SHEET 1 C 6 LEU B 6 ASP B 11 0 SHEET 2 C 6 VAL B 14 LEU B 19 -1 O THR B 16 N ASP B 9 SHEET 3 C 6 VAL B 51 GLY B 56 1 O ILE B 53 N LEU B 17 SHEET 4 C 6 VAL B 90 ILE B 94 1 O ILE B 91 N VAL B 52 SHEET 5 C 6 ILE B 111 SER B 115 1 O ILE B 111 N GLY B 92 SHEET 6 C 6 GLU B 171 VAL B 173 1 O GLU B 171 N ALA B 114 SHEET 1 D 3 ALA B 97 VAL B 99 0 SHEET 2 D 3 ARG B 119 ALA B 121 1 O ARG B 119 N ALA B 98 SHEET 3 D 3 LEU B 158 SER B 159 -1 O LEU B 158 N PHE B 120 SHEET 1 E 6 LEU C 6 ASP C 11 0 SHEET 2 E 6 VAL C 14 LEU C 19 -1 O THR C 16 N ASP C 9 SHEET 3 E 6 VAL C 51 GLY C 56 1 O ILE C 53 N LEU C 17 SHEET 4 E 6 VAL C 90 ILE C 94 1 O ALA C 93 N LEU C 54 SHEET 5 E 6 ILE C 111 SER C 115 1 O ILE C 111 N GLY C 92 SHEET 6 E 6 GLU C 171 VAL C 173 1 O GLU C 171 N ALA C 114 SHEET 1 F 2 ALA C 97 VAL C 99 0 SHEET 2 F 2 ARG C 119 ALA C 121 1 O ARG C 119 N ALA C 98 LINK C ALA A 85 N MSE A 86 1555 1555 1.33 LINK C MSE A 86 N THR A 87 1555 1555 1.33 LINK C ARG A 150 N MSE A 151 1555 1555 1.33 LINK C MSE A 151 N SER A 152 1555 1555 1.33 LINK C ALA B 85 N MSE B 86 1555 1555 1.33 LINK C MSE B 86 N THR B 87 1555 1555 1.33 LINK C ARG B 150 N MSE B 151 1555 1555 1.33 LINK C MSE B 151 N SER B 152 1555 1555 1.33 LINK C ALA C 85 N MSE C 86 1555 1555 1.33 LINK C MSE C 86 N THR C 87 1555 1555 1.33 LINK C ARG C 150 N MSE C 151 1555 1555 1.33 LINK C MSE C 151 N SER C 152 1555 1555 1.33 CISPEP 1 ASP A 58 PRO A 59 0 4.61 CISPEP 2 ASP B 58 PRO B 59 0 1.25 CISPEP 3 ASP C 58 PRO C 59 0 3.97 SITE 1 AC1 6 LEU A 65 GLU A 104 HIS A 124 PRO A 131 SITE 2 AC1 6 THR A 132 TRP A 133 SITE 1 AC2 8 ILE B 79 THR B 100 GLU B 104 HIS B 124 SITE 2 AC2 8 PRO B 131 THR B 132 TRP B 133 HOH B 409 SITE 1 AC3 6 GLY A 144 ILE A 145 GLY A 146 GLN B 141 SITE 2 AC3 6 LYS B 142 GLY B 167 SITE 1 AC4 7 LEU C 65 GLU C 104 HIS C 124 LEU C 130 SITE 2 AC4 7 PRO C 131 THR C 132 TRP C 133 CRYST1 130.318 86.874 80.957 90.00 126.02 90.00 C 1 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007674 0.000000 0.005580 0.00000 SCALE2 0.000000 0.011511 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015273 0.00000