PDB Short entry for 4JWD HEADER CHAPERONE/ANTIBIOTIC 27-MAR-13 4JWD TITLE CRYSTAL STRUCTURE OF THE SUBSTRATE BINDING DOMAIN OF E.COLI DNAK IN TITLE 2 COMPLEX WITH BOVINE BAC7(15-28) COMPND MOL_ID: 1; COMPND 2 MOLECULE: CHAPERONE PROTEIN DNAK; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 389-607; COMPND 5 SYNONYM: HSP70, HEAT SHOCK 70 KDA PROTEIN, HEAT SHOCK PROTEIN 70; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: CATHELICIDIN-3; COMPND 9 CHAIN: C, D; COMPND 10 FRAGMENT: UNP RESIDUES 159-172; COMPND 11 SYNONYM: BACTENECIN-7, BAC7, PR-59; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 STRAIN: K12; SOURCE 5 GENE: DNAK, GROP, GRPF, SEG; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 11 ORGANISM_COMMON: BOVINE,COW,DOMESTIC CATTLE,DOMESTIC COW; SOURCE 12 ORGANISM_TAXID: 9913; SOURCE 13 OTHER_DETAILS: THIS SEQUENCE OCCURS NATURALLY IN CATTLES KEYWDS CHAPERONE, PEPTIDE BINDING, ANTIMICROBIAL PEPTIDE, PEPTIDE BINDING KEYWDS 2 PROTEIN, CHAPERONE-ANTIBIOTIC COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR M.ZAHN,N.STRAETER REVDAT 4 20-SEP-23 4JWD 1 REMARK REVDAT 3 15-NOV-17 4JWD 1 REMARK REVDAT 2 26-MAR-14 4JWD 1 JRNL REVDAT 1 13-NOV-13 4JWD 0 JRNL AUTH M.ZAHN,B.KIESLICH,N.BERTHOLD,D.KNAPPE,R.HOFFMANN,N.STRATER JRNL TITL STRUCTURAL IDENTIFICATION OF DNAK BINDING SITES WITHIN JRNL TITL 2 BOVINE AND SHEEP BACTENECIN BAC7. JRNL REF PROTEIN PEPT.LETT. V. 21 407 2014 JRNL REFN ISSN 0929-8665 JRNL PMID 24164259 REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.8.0 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.77 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 39247 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.189 REMARK 3 R VALUE (WORKING SET) : 0.187 REMARK 3 FREE R VALUE : 0.217 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.050 REMARK 3 FREE R VALUE TEST SET COUNT : 1982 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.00 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 3029 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2170 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2880 REMARK 3 BIN R VALUE (WORKING SET) : 0.2148 REMARK 3 BIN FREE R VALUE : 0.2612 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.92 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 149 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3340 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 15 REMARK 3 SOLVENT ATOMS : 298 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 26.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.93 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 6.71060 REMARK 3 B22 (A**2) : -2.70050 REMARK 3 B33 (A**2) : -4.01020 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.238 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.941 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.929 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 3412 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 4607 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1255 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 113 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 479 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 3412 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 475 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 3980 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.11 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.79 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 18.35 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|389 - A|516 } REMARK 3 ORIGIN FOR THE GROUP (A): -31.5333 36.1542 -21.9061 REMARK 3 T TENSOR REMARK 3 T11: -0.0659 T22: -0.0300 REMARK 3 T33: 0.0109 T12: -0.0048 REMARK 3 T13: 0.0028 T23: -0.0232 REMARK 3 L TENSOR REMARK 3 L11: 1.6910 L22: 0.6697 REMARK 3 L33: 0.4113 L12: -0.2138 REMARK 3 L13: -0.2815 L23: 0.1063 REMARK 3 S TENSOR REMARK 3 S11: -0.0601 S12: 0.0186 S13: 0.1006 REMARK 3 S21: -0.0259 S22: 0.0499 S23: 0.0229 REMARK 3 S31: -0.0004 S32: -0.0490 S33: 0.0102 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { A|517 - A|550 } REMARK 3 ORIGIN FOR THE GROUP (A): -40.2796 20.5233 -13.5966 REMARK 3 T TENSOR REMARK 3 T11: -0.1643 T22: -0.1434 REMARK 3 T33: 0.0846 T12: -0.0477 REMARK 3 T13: -0.0446 T23: 0.0702 REMARK 3 L TENSOR REMARK 3 L11: 7.0138 L22: 1.6929 REMARK 3 L33: 0.1773 L12: 1.2605 REMARK 3 L13: -0.6711 L23: -1.2999 REMARK 3 S TENSOR REMARK 3 S11: -0.0141 S12: 0.2319 S13: 0.1917 REMARK 3 S21: -0.2448 S22: 0.2383 S23: 0.3860 REMARK 3 S31: 0.0860 S32: -0.2105 S33: -0.2242 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: { A|551 - A|599 } REMARK 3 ORIGIN FOR THE GROUP (A): -54.4016 17.6511 -2.3268 REMARK 3 T TENSOR REMARK 3 T11: -0.1586 T22: -0.0074 REMARK 3 T33: 0.1444 T12: -0.0174 REMARK 3 T13: 0.0474 T23: 0.0087 REMARK 3 L TENSOR REMARK 3 L11: 3.1931 L22: 1.0593 REMARK 3 L33: 2.3297 L12: 0.3042 REMARK 3 L13: -1.1239 L23: -0.1911 REMARK 3 S TENSOR REMARK 3 S11: -0.0617 S12: -0.3401 S13: 0.2849 REMARK 3 S21: 0.0962 S22: 0.1025 S23: 0.4888 REMARK 3 S31: -0.1475 S32: -0.4350 S33: -0.0408 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: { B|389 - B|507 } REMARK 3 ORIGIN FOR THE GROUP (A): -11.4112 18.9367 -5.9199 REMARK 3 T TENSOR REMARK 3 T11: -0.0532 T22: -0.0573 REMARK 3 T33: 0.0103 T12: -0.0250 REMARK 3 T13: -0.0065 T23: 0.0005 REMARK 3 L TENSOR REMARK 3 L11: 0.9364 L22: 1.7250 REMARK 3 L33: 0.5979 L12: -0.5026 REMARK 3 L13: -0.2942 L23: 0.6155 REMARK 3 S TENSOR REMARK 3 S11: 0.0395 S12: -0.0844 S13: -0.0296 REMARK 3 S21: -0.0855 S22: 0.0146 S23: -0.1558 REMARK 3 S31: -0.0195 S32: 0.1002 S33: -0.0541 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: { B|508 - B|534 } REMARK 3 ORIGIN FOR THE GROUP (A): -29.2691 17.0309 -0.9982 REMARK 3 T TENSOR REMARK 3 T11: -0.0766 T22: -0.0389 REMARK 3 T33: 0.0497 T12: -0.0069 REMARK 3 T13: 0.0063 T23: 0.0268 REMARK 3 L TENSOR REMARK 3 L11: 3.4714 L22: 3.8283 REMARK 3 L33: 0.9452 L12: 1.5900 REMARK 3 L13: 0.8223 L23: 0.9112 REMARK 3 S TENSOR REMARK 3 S11: 0.0173 S12: -0.4632 S13: -0.2165 REMARK 3 S21: 0.2500 S22: -0.0657 S23: 0.2213 REMARK 3 S31: -0.0406 S32: -0.3329 S33: 0.0484 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: { B|535 - B|602 } REMARK 3 ORIGIN FOR THE GROUP (A): -20.3541 -8.4658 -19.8195 REMARK 3 T TENSOR REMARK 3 T11: -0.1109 T22: -0.0730 REMARK 3 T33: -0.0733 T12: -0.1162 REMARK 3 T13: -0.0306 T23: -0.0663 REMARK 3 L TENSOR REMARK 3 L11: 4.2219 L22: 6.2616 REMARK 3 L33: 6.9222 L12: -1.1297 REMARK 3 L13: -2.1943 L23: 2.9087 REMARK 3 S TENSOR REMARK 3 S11: -0.1244 S12: 0.5442 S13: 0.0122 REMARK 3 S21: -0.4891 S22: 0.1722 S23: 0.0531 REMARK 3 S31: 0.0990 S32: 0.0128 S33: -0.0477 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4JWD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-MAR-13. REMARK 100 THE DEPOSITION ID IS D_1000078587. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-APR-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.918 REMARK 200 MONOCHROMATOR : SI 111 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39301 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 24.770 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.3 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.05900 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.06 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.53400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: PDB ENTRY 3DPO REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.55 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.77 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.2 M AMMONIUM SULFATE, 0.1 M CITRIC REMARK 280 ACID PH 4.4, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 38.99600 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 80.22000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 38.99600 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 80.22000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1300 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12300 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -20.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1470 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12210 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -28.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 600 REMARK 465 ILE A 601 REMARK 465 ALA A 602 REMARK 465 GLN A 603 REMARK 465 GLN A 604 REMARK 465 GLN A 605 REMARK 465 HIS A 606 REMARK 465 ALA A 607 REMARK 465 GLN B 603 REMARK 465 GLN B 604 REMARK 465 GLN B 605 REMARK 465 HIS B 606 REMARK 465 ALA B 607 REMARK 465 ARG C 22 REMARK 465 PRO C 23 REMARK 465 GLY C 24 REMARK 465 PRO C 25 REMARK 465 ARG C 26 REMARK 465 PRO C 27 REMARK 465 ILE C 28 REMARK 465 ARG D 22 REMARK 465 PRO D 23 REMARK 465 GLY D 24 REMARK 465 PRO D 25 REMARK 465 ARG D 26 REMARK 465 PRO D 27 REMARK 465 ILE D 28 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 404 123.71 -36.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR CHAIN C OF CATHELICIDIN-3 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR CHAIN D OF CATHELICIDIN-3 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1DKX RELATED DB: PDB REMARK 900 RELATED ID: 1DKY RELATED DB: PDB REMARK 900 RELATED ID: 1DKZ RELATED DB: PDB REMARK 900 RELATED ID: 3DPO RELATED DB: PDB REMARK 900 RELATED ID: 3DPP RELATED DB: PDB REMARK 900 RELATED ID: 3DPQ RELATED DB: PDB REMARK 900 RELATED ID: 3QNJ RELATED DB: PDB REMARK 900 RELATED ID: 4E81 RELATED DB: PDB REMARK 900 RELATED ID: 4JWC RELATED DB: PDB REMARK 900 RELATED ID: 4JWE RELATED DB: PDB REMARK 900 RELATED ID: 4JWI RELATED DB: PDB DBREF 4JWD A 389 607 UNP P0A6Y8 DNAK_ECOLI 389 607 DBREF 4JWD B 389 607 UNP P0A6Y8 DNAK_ECOLI 389 607 DBREF 4JWD C 15 28 UNP P19661 CTHL3_BOVIN 159 172 DBREF 4JWD D 15 28 UNP P19661 CTHL3_BOVIN 159 172 SEQRES 1 A 219 VAL LEU LEU LEU ASP VAL THR PRO LEU SER LEU GLY ILE SEQRES 2 A 219 GLU THR MET GLY GLY VAL MET THR THR LEU ILE ALA LYS SEQRES 3 A 219 ASN THR THR ILE PRO THR LYS HIS SER GLN VAL PHE SER SEQRES 4 A 219 THR ALA GLU ASP ASN GLN SER ALA VAL THR ILE HIS VAL SEQRES 5 A 219 LEU GLN GLY GLU ARG LYS ARG ALA ALA ASP ASN LYS SER SEQRES 6 A 219 LEU GLY GLN PHE ASN LEU ASP GLY ILE ASN PRO ALA PRO SEQRES 7 A 219 ARG GLY MET PRO GLN ILE GLU VAL THR PHE ASP ILE ASP SEQRES 8 A 219 ALA ASP GLY ILE LEU HIS VAL SER ALA LYS ASP LYS ASN SEQRES 9 A 219 SER GLY LYS GLU GLN LYS ILE THR ILE LYS ALA SER SER SEQRES 10 A 219 GLY LEU ASN GLU ASP GLU ILE GLN LYS MET VAL ARG ASP SEQRES 11 A 219 ALA GLU ALA ASN ALA GLU ALA ASP ARG LYS PHE GLU GLU SEQRES 12 A 219 LEU VAL GLN THR ARG ASN GLN GLY ASP HIS LEU LEU HIS SEQRES 13 A 219 SER THR ARG LYS GLN VAL GLU GLU ALA GLY ASP LYS LEU SEQRES 14 A 219 PRO ALA ASP ASP LYS THR ALA ILE GLU SER ALA LEU THR SEQRES 15 A 219 ALA LEU GLU THR ALA LEU LYS GLY GLU ASP LYS ALA ALA SEQRES 16 A 219 ILE GLU ALA LYS MET GLN GLU LEU ALA GLN VAL SER GLN SEQRES 17 A 219 LYS LEU MET GLU ILE ALA GLN GLN GLN HIS ALA SEQRES 1 B 219 VAL LEU LEU LEU ASP VAL THR PRO LEU SER LEU GLY ILE SEQRES 2 B 219 GLU THR MET GLY GLY VAL MET THR THR LEU ILE ALA LYS SEQRES 3 B 219 ASN THR THR ILE PRO THR LYS HIS SER GLN VAL PHE SER SEQRES 4 B 219 THR ALA GLU ASP ASN GLN SER ALA VAL THR ILE HIS VAL SEQRES 5 B 219 LEU GLN GLY GLU ARG LYS ARG ALA ALA ASP ASN LYS SER SEQRES 6 B 219 LEU GLY GLN PHE ASN LEU ASP GLY ILE ASN PRO ALA PRO SEQRES 7 B 219 ARG GLY MET PRO GLN ILE GLU VAL THR PHE ASP ILE ASP SEQRES 8 B 219 ALA ASP GLY ILE LEU HIS VAL SER ALA LYS ASP LYS ASN SEQRES 9 B 219 SER GLY LYS GLU GLN LYS ILE THR ILE LYS ALA SER SER SEQRES 10 B 219 GLY LEU ASN GLU ASP GLU ILE GLN LYS MET VAL ARG ASP SEQRES 11 B 219 ALA GLU ALA ASN ALA GLU ALA ASP ARG LYS PHE GLU GLU SEQRES 12 B 219 LEU VAL GLN THR ARG ASN GLN GLY ASP HIS LEU LEU HIS SEQRES 13 B 219 SER THR ARG LYS GLN VAL GLU GLU ALA GLY ASP LYS LEU SEQRES 14 B 219 PRO ALA ASP ASP LYS THR ALA ILE GLU SER ALA LEU THR SEQRES 15 B 219 ALA LEU GLU THR ALA LEU LYS GLY GLU ASP LYS ALA ALA SEQRES 16 B 219 ILE GLU ALA LYS MET GLN GLU LEU ALA GLN VAL SER GLN SEQRES 17 B 219 LYS LEU MET GLU ILE ALA GLN GLN GLN HIS ALA SEQRES 1 C 14 PRO ARG PRO LEU PRO PHE PRO ARG PRO GLY PRO ARG PRO SEQRES 2 C 14 ILE SEQRES 1 D 14 PRO ARG PRO LEU PRO PHE PRO ARG PRO GLY PRO ARG PRO SEQRES 2 D 14 ILE HET SO4 A 701 5 HET SO4 B 701 5 HET SO4 B 702 5 HETNAM SO4 SULFATE ION FORMUL 5 SO4 3(O4 S 2-) FORMUL 8 HOH *298(H2 O) HELIX 1 1 ARG A 447 ASN A 451 5 5 HELIX 2 2 ASN A 508 ASN A 522 1 15 HELIX 3 3 ASN A 522 GLY A 554 1 33 HELIX 4 4 ASP A 555 LEU A 557 5 3 HELIX 5 5 PRO A 558 LYS A 577 1 20 HELIX 6 6 ASP A 580 VAL A 594 1 15 HELIX 7 7 ARG B 447 ASN B 451 5 5 HELIX 8 8 ASN B 508 ASN B 522 1 15 HELIX 9 9 ASN B 522 GLY B 554 1 33 HELIX 10 10 ASP B 555 LEU B 557 5 3 HELIX 11 11 PRO B 558 GLY B 578 1 21 HELIX 12 12 ASP B 580 SER B 595 1 16 HELIX 13 13 SER B 595 ALA B 602 1 8 SHEET 1 A 4 VAL A 407 ILE A 412 0 SHEET 2 A 4 LEU A 399 THR A 403 -1 N LEU A 399 O LEU A 411 SHEET 3 A 4 VAL A 436 GLN A 442 -1 O LEU A 441 N GLY A 400 SHEET 4 A 4 LYS A 452 LEU A 459 -1 O PHE A 457 N ILE A 438 SHEET 1 B 5 GLU A 496 ILE A 501 0 SHEET 2 B 5 LEU A 484 ASP A 490 -1 N LEU A 484 O ILE A 501 SHEET 3 B 5 ILE A 472 ILE A 478 -1 N ASP A 477 O HIS A 485 SHEET 4 B 5 THR A 420 THR A 428 -1 N THR A 420 O ILE A 478 SHEET 5 B 5 ARG D 16 LEU D 18 1 O ARG D 16 N SER A 427 SHEET 1 C 4 VAL B 407 ILE B 412 0 SHEET 2 C 4 LEU B 399 THR B 403 -1 N LEU B 399 O LEU B 411 SHEET 3 C 4 VAL B 436 GLN B 442 -1 O LEU B 441 N GLY B 400 SHEET 4 C 4 LYS B 452 LEU B 459 -1 O PHE B 457 N ILE B 438 SHEET 1 D 5 GLU B 496 ILE B 501 0 SHEET 2 D 5 LEU B 484 ASP B 490 -1 N LEU B 484 O ILE B 501 SHEET 3 D 5 ILE B 472 ILE B 478 -1 N ASP B 477 O HIS B 485 SHEET 4 D 5 THR B 420 THR B 428 -1 N PHE B 426 O ILE B 472 SHEET 5 D 5 PRO C 17 LEU C 18 1 O LEU C 18 N SER B 427 CISPEP 1 ILE A 418 PRO A 419 0 4.05 CISPEP 2 ILE B 418 PRO B 419 0 0.74 SITE 1 AC1 4 LYS A 421 HIS A 422 SER A 423 HOH A 944 SITE 1 AC2 3 LYS B 502 SER B 504 HOH B 814 SITE 1 AC3 4 ARG B 447 ARG B 536 LYS B 577 GLU B 579 SITE 1 AC4 20 ILE B 401 GLU B 402 THR B 403 MET B 404 SITE 2 AC4 20 THR B 409 GLN B 424 VAL B 425 PHE B 426 SITE 3 AC4 20 SER B 427 THR B 428 ALA B 429 GLN B 433 SITE 4 AC4 20 SER B 434 ALA B 435 VAL B 436 THR B 437 SITE 5 AC4 20 ILE B 438 ASN B 458 HOH B 931 HOH C 101 SITE 1 AC5 18 ILE A 401 GLU A 402 THR A 403 MET A 404 SITE 2 AC5 18 THR A 409 GLN A 424 VAL A 425 PHE A 426 SITE 3 AC5 18 SER A 427 ALA A 429 GLN A 433 ALA A 435 SITE 4 AC5 18 VAL A 436 THR A 437 ASN A 458 HOH A 893 SITE 5 AC5 18 HOH A 960 HOH D 101 CRYST1 77.992 160.440 44.973 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012822 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006233 0.000000 0.00000 SCALE3 0.000000 0.000000 0.022236 0.00000