PDB Short entry for 4KI6 HEADER TRANSFERASE/DNA 01-MAY-13 4KI6 TITLE TERNARY COMPLEX OF RB69 MUTANT L415F WITH RIBONUCLEOTIDES AT -1 AND -2 TITLE 2 POSITION COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA POLYMERASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: GP43; COMPND 5 EC: 2.7.7.7; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: DNA/RNA (5'-D(*AP*CP*A)-R(P*GP*G)- COMPND 10 D(P*TP*AP*AP*GP*CP*AP*GP*TP*CP*CP*GP*CP*G)-3'); COMPND 11 CHAIN: T; COMPND 12 ENGINEERED: YES; COMPND 13 MOL_ID: 3; COMPND 14 MOLECULE: DNA (5'-D(*GP*CP*GP*GP*AP*CP*TP*GP*CP*TP*TP*AP*CP*C)-3'); COMPND 15 CHAIN: P; COMPND 16 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROBACTERIA PHAGE RB69; SOURCE 3 ORGANISM_TAXID: 12353; SOURCE 4 GENE: 43; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 SYNTHETIC: YES; SOURCE 9 MOL_ID: 3; SOURCE 10 SYNTHETIC: YES KEYWDS RIBONUCLEOTIDE, TRANSFERASE-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR A.R.CLAUSEN,L.C.PEDERSEN REVDAT 3 20-SEP-23 4KI6 1 REMARK SEQADV LINK REVDAT 2 30-OCT-13 4KI6 1 JRNL REVDAT 1 09-OCT-13 4KI6 0 JRNL AUTH A.R.CLAUSEN,M.S.MURRAY,A.R.PASSER,L.C.PEDERSEN,T.A.KUNKEL JRNL TITL STRUCTURE-FUNCTION ANALYSIS OF RIBONUCLEOTIDE BYPASS BY B JRNL TITL 2 FAMILY DNA REPLICASES. JRNL REF PROC.NATL.ACAD.SCI.USA V. 110 16802 2013 JRNL REFN ISSN 0027-8424 JRNL PMID 24082122 JRNL DOI 10.1073/PNAS.1309119110 REMARK 2 REMARK 2 RESOLUTION. 2.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.1_1168) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.95 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 3 NUMBER OF REFLECTIONS : 39755 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.197 REMARK 3 R VALUE (WORKING SET) : 0.195 REMARK 3 FREE R VALUE : 0.233 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 1994 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 35.9506 - 6.1338 0.96 2859 122 0.1829 0.2221 REMARK 3 2 6.1338 - 4.8724 0.98 2754 167 0.1735 0.1876 REMARK 3 3 4.8724 - 4.2576 0.99 2735 141 0.1449 0.1905 REMARK 3 4 4.2576 - 3.8688 0.98 2734 145 0.1632 0.1737 REMARK 3 5 3.8688 - 3.5918 0.98 2730 154 0.1883 0.2403 REMARK 3 6 3.5918 - 3.3802 0.99 2711 142 0.2048 0.2523 REMARK 3 7 3.3802 - 3.2110 0.99 2725 141 0.2248 0.2598 REMARK 3 8 3.2110 - 3.0713 0.99 2761 128 0.2367 0.2835 REMARK 3 9 3.0713 - 2.9532 0.99 2700 138 0.2478 0.3263 REMARK 3 10 2.9532 - 2.8513 0.99 2738 140 0.2453 0.2852 REMARK 3 11 2.8513 - 2.7622 0.99 2706 142 0.2513 0.2913 REMARK 3 12 2.7622 - 2.6832 0.98 2677 149 0.2549 0.3398 REMARK 3 13 2.6832 - 2.6126 0.94 2548 153 0.2666 0.2777 REMARK 3 14 2.6126 - 2.5489 0.87 2383 132 0.2799 0.3268 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.320 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.200 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 8051 REMARK 3 ANGLE : 0.652 11075 REMARK 3 CHIRALITY : 0.046 1194 REMARK 3 PLANARITY : 0.003 1324 REMARK 3 DIHEDRAL : 11.075 2633 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 17 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 1:108) REMARK 3 ORIGIN FOR THE GROUP (A): 28.5373 60.3971 33.7802 REMARK 3 T TENSOR REMARK 3 T11: 0.3793 T22: 0.5241 REMARK 3 T33: 1.0800 T12: -0.0077 REMARK 3 T13: -0.0368 T23: 0.0918 REMARK 3 L TENSOR REMARK 3 L11: 0.5877 L22: 3.5565 REMARK 3 L33: 1.0527 L12: 0.6550 REMARK 3 L13: -0.7282 L23: -0.6992 REMARK 3 S TENSOR REMARK 3 S11: 0.1763 S12: 0.0761 S13: 0.1231 REMARK 3 S21: 0.1363 S22: -0.1826 S23: -1.1356 REMARK 3 S31: -0.1449 S32: 0.1263 S33: -0.0118 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 109:250) REMARK 3 ORIGIN FOR THE GROUP (A): 12.5161 35.0977 54.9806 REMARK 3 T TENSOR REMARK 3 T11: 0.5455 T22: 0.4291 REMARK 3 T33: 0.4701 T12: -0.0009 REMARK 3 T13: -0.2332 T23: 0.0241 REMARK 3 L TENSOR REMARK 3 L11: 1.0668 L22: 3.6719 REMARK 3 L33: 1.3426 L12: 0.4466 REMARK 3 L13: -0.9510 L23: 0.2186 REMARK 3 S TENSOR REMARK 3 S11: 0.0285 S12: -0.1053 S13: 0.0746 REMARK 3 S21: 0.7139 S22: -0.1949 S23: -0.4603 REMARK 3 S31: -0.0649 S32: 0.0854 S33: 0.1941 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 251:261) REMARK 3 ORIGIN FOR THE GROUP (A): 0.8666 56.3451 53.2452 REMARK 3 T TENSOR REMARK 3 T11: 0.9542 T22: 1.0318 REMARK 3 T33: 1.0092 T12: 0.2330 REMARK 3 T13: -0.2401 T23: -0.2917 REMARK 3 L TENSOR REMARK 3 L11: 0.7630 L22: 3.7769 REMARK 3 L33: 3.4029 L12: -0.9625 REMARK 3 L13: 1.5686 L23: -1.3004 REMARK 3 S TENSOR REMARK 3 S11: -0.4770 S12: -0.5010 S13: 0.5872 REMARK 3 S21: 0.2212 S22: -0.4363 S23: 1.3974 REMARK 3 S31: -0.6305 S32: 0.3468 S33: 0.8623 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 262:310) REMARK 3 ORIGIN FOR THE GROUP (A): 2.3250 37.5547 40.9000 REMARK 3 T TENSOR REMARK 3 T11: 0.2882 T22: 0.3776 REMARK 3 T33: 0.3114 T12: 0.0437 REMARK 3 T13: -0.0391 T23: 0.0460 REMARK 3 L TENSOR REMARK 3 L11: 1.5683 L22: 1.0644 REMARK 3 L33: 2.3234 L12: 0.3015 REMARK 3 L13: 0.3058 L23: 0.6180 REMARK 3 S TENSOR REMARK 3 S11: -0.0013 S12: -0.0882 S13: 0.0202 REMARK 3 S21: 0.1673 S22: -0.0290 S23: 0.1523 REMARK 3 S31: -0.0358 S32: -0.3524 S33: 0.0467 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 311:413) REMARK 3 ORIGIN FOR THE GROUP (A): 7.3415 45.6224 29.6454 REMARK 3 T TENSOR REMARK 3 T11: 0.2851 T22: 0.3800 REMARK 3 T33: 0.3437 T12: 0.0174 REMARK 3 T13: 0.0223 T23: -0.0164 REMARK 3 L TENSOR REMARK 3 L11: 0.6371 L22: 2.3933 REMARK 3 L33: 0.7113 L12: 0.0902 REMARK 3 L13: 0.0072 L23: -0.3173 REMARK 3 S TENSOR REMARK 3 S11: -0.0368 S12: 0.0736 S13: 0.0671 REMARK 3 S21: -0.0540 S22: -0.0726 S23: -0.4168 REMARK 3 S31: 0.0367 S32: -0.0393 S33: 0.0894 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN A AND RESID 414:510) REMARK 3 ORIGIN FOR THE GROUP (A): 8.0180 50.3791 9.9470 REMARK 3 T TENSOR REMARK 3 T11: 0.5618 T22: 0.4907 REMARK 3 T33: 0.3423 T12: 0.0538 REMARK 3 T13: 0.2006 T23: 0.0438 REMARK 3 L TENSOR REMARK 3 L11: 1.3734 L22: 2.4575 REMARK 3 L33: 1.9252 L12: -0.1332 REMARK 3 L13: 0.1745 L23: -1.1431 REMARK 3 S TENSOR REMARK 3 S11: 0.0093 S12: 0.2971 S13: 0.1081 REMARK 3 S21: -0.8300 S22: -0.1270 S23: -0.4566 REMARK 3 S31: 0.2791 S32: 0.1372 S33: 0.0795 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN A AND RESID 511:557) REMARK 3 ORIGIN FOR THE GROUP (A): 9.5209 21.6424 19.1902 REMARK 3 T TENSOR REMARK 3 T11: 1.2633 T22: 0.5905 REMARK 3 T33: 0.7464 T12: 0.1285 REMARK 3 T13: 0.2319 T23: -0.1482 REMARK 3 L TENSOR REMARK 3 L11: 1.4333 L22: 1.0820 REMARK 3 L33: 0.8102 L12: -0.6269 REMARK 3 L13: 0.0210 L23: 0.8018 REMARK 3 S TENSOR REMARK 3 S11: 0.0261 S12: 0.5915 S13: -0.6711 REMARK 3 S21: -0.7516 S22: -0.3281 S23: -0.3261 REMARK 3 S31: 1.4514 S32: 0.0352 S33: 0.2670 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN A AND RESID 558:683) REMARK 3 ORIGIN FOR THE GROUP (A): -1.4780 48.2890 4.7094 REMARK 3 T TENSOR REMARK 3 T11: 0.7366 T22: 0.5541 REMARK 3 T33: 0.3205 T12: 0.0137 REMARK 3 T13: 0.0758 T23: 0.0258 REMARK 3 L TENSOR REMARK 3 L11: 1.8225 L22: 2.0775 REMARK 3 L33: 0.3875 L12: 0.4659 REMARK 3 L13: -0.1022 L23: -0.1709 REMARK 3 S TENSOR REMARK 3 S11: -0.0532 S12: 0.6488 S13: -0.0627 REMARK 3 S21: -0.8272 S22: 0.0317 S23: -0.0653 REMARK 3 S31: 0.2293 S32: -0.0025 S33: 0.0473 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: (CHAIN A AND RESID 684:883) REMARK 3 ORIGIN FOR THE GROUP (A): -18.7521 37.7203 32.6687 REMARK 3 T TENSOR REMARK 3 T11: 0.3256 T22: 0.3711 REMARK 3 T33: 0.4555 T12: -0.0168 REMARK 3 T13: 0.0078 T23: 0.0530 REMARK 3 L TENSOR REMARK 3 L11: 2.1852 L22: 2.0905 REMARK 3 L33: 3.0978 L12: -0.1687 REMARK 3 L13: -0.3217 L23: 0.1587 REMARK 3 S TENSOR REMARK 3 S11: -0.1449 S12: -0.1776 S13: -0.2413 REMARK 3 S21: 0.0009 S22: 0.0194 S23: 0.4213 REMARK 3 S31: 0.2424 S32: -0.1922 S33: 0.1264 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: (CHAIN A AND RESID 884:902) REMARK 3 ORIGIN FOR THE GROUP (A): -36.7663 32.4294 15.1113 REMARK 3 T TENSOR REMARK 3 T11: 0.6175 T22: 0.8587 REMARK 3 T33: 0.7358 T12: -0.1420 REMARK 3 T13: -0.1893 T23: -0.0126 REMARK 3 L TENSOR REMARK 3 L11: 2.0685 L22: 1.3436 REMARK 3 L33: -0.0006 L12: 1.6700 REMARK 3 L13: 0.0416 L23: 0.0345 REMARK 3 S TENSOR REMARK 3 S11: -0.1342 S12: -1.4472 S13: -0.3106 REMARK 3 S21: -0.2669 S22: -0.8024 S23: -0.4253 REMARK 3 S31: -0.1106 S32: -0.0423 S33: 0.8818 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: (CHAIN P AND RESID 102:107) REMARK 3 ORIGIN FOR THE GROUP (A): -33.9684 58.2361 29.7864 REMARK 3 T TENSOR REMARK 3 T11: 0.6940 T22: 1.1827 REMARK 3 T33: 1.4058 T12: 0.0840 REMARK 3 T13: 0.0050 T23: 0.1221 REMARK 3 L TENSOR REMARK 3 L11: 2.2842 L22: 3.5793 REMARK 3 L33: 3.3845 L12: -1.1221 REMARK 3 L13: 2.0465 L23: 1.1536 REMARK 3 S TENSOR REMARK 3 S11: -0.5235 S12: 0.8624 S13: -0.2035 REMARK 3 S21: -0.2266 S22: 0.7371 S23: 1.2180 REMARK 3 S31: 0.9295 S32: -0.4235 S33: 0.1034 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: (CHAIN P AND RESID 108:111) REMARK 3 ORIGIN FOR THE GROUP (A): -16.9149 57.2727 33.8098 REMARK 3 T TENSOR REMARK 3 T11: 0.4010 T22: 0.5720 REMARK 3 T33: 0.8253 T12: -0.0075 REMARK 3 T13: -0.0591 T23: 0.0882 REMARK 3 L TENSOR REMARK 3 L11: 7.7817 L22: 8.6112 REMARK 3 L33: 7.0085 L12: -2.9922 REMARK 3 L13: 1.6138 L23: -1.2880 REMARK 3 S TENSOR REMARK 3 S11: -0.6784 S12: 1.0177 S13: 1.6725 REMARK 3 S21: 0.4699 S22: 0.8250 S23: 0.9336 REMARK 3 S31: -0.9134 S32: -0.4866 S33: 0.0392 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: (CHAIN P AND RESID 112:115) REMARK 3 ORIGIN FOR THE GROUP (A): -8.1499 47.3510 24.7876 REMARK 3 T TENSOR REMARK 3 T11: 0.4489 T22: 0.5359 REMARK 3 T33: 0.3969 T12: 0.0096 REMARK 3 T13: 0.0576 T23: 0.0113 REMARK 3 L TENSOR REMARK 3 L11: 2.7263 L22: 3.9037 REMARK 3 L33: 0.1905 L12: 0.5292 REMARK 3 L13: 0.6946 L23: -0.0651 REMARK 3 S TENSOR REMARK 3 S11: -0.1813 S12: 0.4572 S13: -0.0165 REMARK 3 S21: -0.8604 S22: 0.3960 S23: -0.6995 REMARK 3 S31: -0.1627 S32: -0.4319 S33: -0.3404 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: (CHAIN T AND RESID 1:4) REMARK 3 ORIGIN FOR THE GROUP (A): 4.6431 58.4727 30.4364 REMARK 3 T TENSOR REMARK 3 T11: 0.4699 T22: 0.5811 REMARK 3 T33: 0.4603 T12: 0.0339 REMARK 3 T13: 0.0384 T23: -0.0749 REMARK 3 L TENSOR REMARK 3 L11: 5.5613 L22: 6.9106 REMARK 3 L33: 2.4338 L12: -2.3674 REMARK 3 L13: -1.7532 L23: -2.5188 REMARK 3 S TENSOR REMARK 3 S11: -0.2239 S12: -1.1173 S13: 0.8256 REMARK 3 S21: 1.1033 S22: 0.1625 S23: -0.1908 REMARK 3 S31: -0.2483 S32: 0.1507 S33: 0.0685 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: (CHAIN T AND RESID 5:8) REMARK 3 ORIGIN FOR THE GROUP (A): -10.1477 55.2121 21.8924 REMARK 3 T TENSOR REMARK 3 T11: 0.4449 T22: 0.5428 REMARK 3 T33: 0.7312 T12: -0.0547 REMARK 3 T13: -0.0604 T23: 0.1556 REMARK 3 L TENSOR REMARK 3 L11: 4.7374 L22: 0.8951 REMARK 3 L33: 0.4914 L12: 1.8578 REMARK 3 L13: 0.7311 L23: 0.5399 REMARK 3 S TENSOR REMARK 3 S11: -0.7720 S12: 0.2884 S13: 1.4208 REMARK 3 S21: -1.0256 S22: 0.2526 S23: 0.3462 REMARK 3 S31: -0.0192 S32: -0.0984 S33: 0.5710 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: (CHAIN T AND RESID 9:12) REMARK 3 ORIGIN FOR THE GROUP (A): -23.1702 51.5763 31.8097 REMARK 3 T TENSOR REMARK 3 T11: 0.3975 T22: 0.7134 REMARK 3 T33: 0.6840 T12: 0.0640 REMARK 3 T13: 0.0556 T23: 0.0411 REMARK 3 L TENSOR REMARK 3 L11: 4.8374 L22: 3.7555 REMARK 3 L33: 4.2421 L12: -0.7925 REMARK 3 L13: -2.6982 L23: -0.3795 REMARK 3 S TENSOR REMARK 3 S11: -0.1450 S12: 0.6672 S13: 0.8205 REMARK 3 S21: 0.2218 S22: 0.2839 S23: 0.6665 REMARK 3 S31: -0.2770 S32: -1.4756 S33: 0.1691 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: (CHAIN T AND RESID 13:18) REMARK 3 ORIGIN FOR THE GROUP (A): -37.4316 63.8777 32.5923 REMARK 3 T TENSOR REMARK 3 T11: 0.6136 T22: 0.8526 REMARK 3 T33: 1.4363 T12: 0.1924 REMARK 3 T13: -0.0401 T23: 0.0167 REMARK 3 L TENSOR REMARK 3 L11: 1.8855 L22: 0.0788 REMARK 3 L33: 0.3642 L12: -0.2610 REMARK 3 L13: 0.6729 L23: -0.0132 REMARK 3 S TENSOR REMARK 3 S11: -1.0323 S12: 0.6863 S13: 0.7043 REMARK 3 S21: 0.8042 S22: 0.4190 S23: -0.0196 REMARK 3 S31: 0.3661 S32: 0.9328 S33: 0.4258 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4KI6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-MAY-13. REMARK 100 THE DEPOSITION ID IS D_1000079369. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-DEC-12 REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : MIRRORS REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 300 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39756 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.550 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.400 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 86.2 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX 1.8.1_1168 REMARK 200 STARTING MODEL: 3CQ8 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.67 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50 MM TRIS-HCL, 16% PEG350, 180 MM REMARK 280 CALCIUM CHLORIDE, PH 8.0, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 40.42650 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 63.98500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 59.20000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 63.98500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 40.42650 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 59.20000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6900 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 41370 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -127.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, T, P REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PHE A 903 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 2 CG CD CE NZ REMARK 470 ARG A 25 NE CZ NH1 NH2 REMARK 470 GLU A 30 OE1 OE2 REMARK 470 GLU A 32 CD OE1 OE2 REMARK 470 LYS A 34 CE NZ REMARK 470 GLU A 43 CG CD OE1 OE2 REMARK 470 SER A 44 OG REMARK 470 LYS A 48 CG CD CE NZ REMARK 470 LYS A 55 CD CE NZ REMARK 470 LYS A 60 CG CD CE NZ REMARK 470 GLN A 70 CD OE1 NE2 REMARK 470 GLU A 76 CG CD OE1 OE2 REMARK 470 ASN A 98 CG OD1 ND2 REMARK 470 LYS A 102 CG CD CE NZ REMARK 470 LYS A 107 NZ REMARK 470 LYS A 130 CE NZ REMARK 470 LYS A 195 CD CE NZ REMARK 470 GLN A 207 CG CD OE1 NE2 REMARK 470 LYS A 231 NZ REMARK 470 SER A 237 OG REMARK 470 LYS A 251 CG CD CE NZ REMARK 470 ILE A 253 CD1 REMARK 470 ASN A 255 CG OD1 ND2 REMARK 470 TYR A 257 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ARG A 260 CD NE CZ NH1 NH2 REMARK 470 ILE A 262 CG1 CG2 CD1 REMARK 470 LYS A 302 CG CD CE NZ REMARK 470 LYS A 304 CG CD CE NZ REMARK 470 LYS A 311 CD CE NZ REMARK 470 GLU A 375 CD OE1 OE2 REMARK 470 ARG A 384 CD NE CZ NH1 NH2 REMARK 470 ILE A 400 CD1 REMARK 470 LYS A 405 CE NZ REMARK 470 LYS A 435 CD CE NZ REMARK 470 GLU A 448 CD OE1 OE2 REMARK 470 ASP A 452 CG OD1 OD2 REMARK 470 ARG A 467 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 483 CD CE NZ REMARK 470 LYS A 500 CD CE NZ REMARK 470 LEU A 503 CG CD1 CD2 REMARK 470 LEU A 508 CD1 CD2 REMARK 470 GLU A 512 CG CD OE1 OE2 REMARK 470 LEU A 514 CG CD1 CD2 REMARK 470 GLU A 525 CG CD OE1 OE2 REMARK 470 ILE A 526 CG1 CG2 CD1 REMARK 470 GLU A 528 CG CD OE1 OE2 REMARK 470 ILE A 530 CG2 CD1 REMARK 470 LYS A 531 CG CD CE NZ REMARK 470 LYS A 532 CG CD CE NZ REMARK 470 LEU A 533 CG CD1 CD2 REMARK 470 LYS A 536 CG CD CE NZ REMARK 470 GLU A 603 CG CD OE1 OE2 REMARK 470 VAL A 608 CG1 CG2 REMARK 470 CYS A 609 SG REMARK 470 THR A 611 OG1 CG2 REMARK 470 GLU A 612 CG CD OE1 OE2 REMARK 470 LYS A 631 CD CE NZ REMARK 470 LYS A 635 CG CD CE NZ REMARK 470 GLU A 638 CG CD OE1 OE2 REMARK 470 SER A 639 OG REMARK 470 LYS A 640 CG CD CE NZ REMARK 470 LYS A 653 CG CD CE NZ REMARK 470 ARG A 658 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 696 CG CD CE NZ REMARK 470 GLU A 722 CG CD OE1 OE2 REMARK 470 LYS A 724 CG CD CE NZ REMARK 470 LYS A 734 NZ REMARK 470 LYS A 743 CE NZ REMARK 470 GLU A 758 CG CD OE1 OE2 REMARK 470 GLU A 762 CG CD OE1 OE2 REMARK 470 LYS A 765 CG CD CE NZ REMARK 470 LYS A 816 CD CE NZ REMARK 470 ILE A 819 CG1 CG2 CD1 REMARK 470 ASP A 820 CG OD1 OD2 REMARK 470 GLU A 828 OE1 OE2 REMARK 470 GLU A 873 CG CD OE1 OE2 REMARK 470 LYS A 878 CD CE NZ REMARK 470 LYS A 893 CG CD CE NZ REMARK 470 LYS A 894 CD CE NZ REMARK 470 LEU A 897 CG CD1 CD2 REMARK 470 PHE A 898 CD1 CD2 CE1 CE2 CZ REMARK 470 MET A 900 CG SD CE REMARK 470 ASP A 902 CG OD1 OD2 REMARK 470 DC P 115 O3' REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DC T 14 O4' - C1' - N1 ANGL. DEV. = 2.1 DEGREES REMARK 500 DT P 112 O4' - C1' - N1 ANGL. DEV. = 2.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 45 105.37 -59.69 REMARK 500 PHE A 221 -66.40 -123.71 REMARK 500 ASN A 255 78.81 54.96 REMARK 500 MET A 256 -115.61 55.79 REMARK 500 LEU A 271 79.86 -118.17 REMARK 500 LEU A 303 97.23 -58.71 REMARK 500 ASP A 306 -77.44 -68.16 REMARK 500 LYS A 352 60.22 66.89 REMARK 500 LYS A 405 -71.51 -63.94 REMARK 500 PRO A 458 13.49 -68.88 REMARK 500 LEU A 508 95.62 -54.92 REMARK 500 SER A 534 -161.90 -75.29 REMARK 500 ASP A 579 102.86 -165.14 REMARK 500 THR A 622 -65.01 65.31 REMARK 500 ASP A 623 16.03 -144.70 REMARK 500 GLU A 686 -87.66 -100.53 REMARK 500 ASP A 820 -16.98 71.64 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1004 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 116 OE2 REMARK 620 2 GLU A 116 OE1 51.3 REMARK 620 3 HOH A1126 O 81.5 79.2 REMARK 620 4 HOH A1240 O 157.6 135.4 79.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1006 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 172 OE1 REMARK 620 2 GLU A 177 OE2 98.7 REMARK 620 3 HOH A1202 O 47.0 140.8 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1007 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 192 OD2 REMARK 620 2 GLU A 196 OE2 133.6 REMARK 620 3 GLU A 196 OE1 96.3 47.6 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1002 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 411 OD2 REMARK 620 2 ASP A 411 OD1 54.5 REMARK 620 3 LEU A 412 O 83.2 115.9 REMARK 620 4 ASP A 623 OD2 125.6 84.1 86.3 REMARK 620 5 TTP A1001 O1G 79.3 112.2 102.4 154.7 REMARK 620 6 TTP A1001 O2B 146.7 154.8 85.8 84.7 72.5 REMARK 620 7 TTP A1001 O2A 129.1 86.4 147.6 72.2 89.0 68.6 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1003 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 411 OD1 REMARK 620 2 ASP A 623 OD1 73.4 REMARK 620 3 TTP A1001 O2A 74.5 65.1 REMARK 620 4 HOH A1168 O 64.0 130.5 121.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A1008 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 505 O REMARK 620 2 ASN A 507 OD1 74.8 REMARK 620 3 LYS A 531 O 149.5 74.9 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1005 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 684 OD1 REMARK 620 2 HOH A1251 O 63.6 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TTP A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 1003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 1004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 1005 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 1006 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 1007 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 1008 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 1009 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 1010 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4KHQ RELATED DB: PDB REMARK 900 RELATED ID: 4KHS RELATED DB: PDB REMARK 900 RELATED ID: 4KHU RELATED DB: PDB REMARK 900 RELATED ID: 4KHW RELATED DB: PDB REMARK 900 RELATED ID: 4KHY RELATED DB: PDB REMARK 900 RELATED ID: 4KI4 RELATED DB: PDB DBREF 4KI6 A 1 903 UNP Q38087 DPOL_BPR69 1 903 DBREF 4KI6 T 1 18 PDB 4KI6 4KI6 1 18 DBREF 4KI6 P 102 115 PDB 4KI6 4KI6 102 115 SEQADV 4KI6 ALA A 222 UNP Q38087 ASP 222 ENGINEERED MUTATION SEQADV 4KI6 ALA A 327 UNP Q38087 ASP 327 ENGINEERED MUTATION SEQADV 4KI6 PHE A 415 UNP Q38087 LEU 415 ENGINEERED MUTATION SEQRES 1 A 903 MET LYS GLU PHE TYR LEU THR VAL GLU GLN ILE GLY ASP SEQRES 2 A 903 SER ILE PHE GLU ARG TYR ILE ASP SER ASN GLY ARG GLU SEQRES 3 A 903 ARG THR ARG GLU VAL GLU TYR LYS PRO SER LEU PHE ALA SEQRES 4 A 903 HIS CYS PRO GLU SER GLN ALA THR LYS TYR PHE ASP ILE SEQRES 5 A 903 TYR GLY LYS PRO CYS THR ARG LYS LEU PHE ALA ASN MET SEQRES 6 A 903 ARG ASP ALA SER GLN TRP ILE LYS ARG MET GLU ASP ILE SEQRES 7 A 903 GLY LEU GLU ALA LEU GLY MET ASP ASP PHE LYS LEU ALA SEQRES 8 A 903 TYR LEU SER ASP THR TYR ASN TYR GLU ILE LYS TYR ASP SEQRES 9 A 903 HIS THR LYS ILE ARG VAL ALA ASN PHE ASP ILE GLU VAL SEQRES 10 A 903 THR SER PRO ASP GLY PHE PRO GLU PRO SER GLN ALA LYS SEQRES 11 A 903 HIS PRO ILE ASP ALA ILE THR HIS TYR ASP SER ILE ASP SEQRES 12 A 903 ASP ARG PHE TYR VAL PHE ASP LEU LEU ASN SER PRO TYR SEQRES 13 A 903 GLY ASN VAL GLU GLU TRP SER ILE GLU ILE ALA ALA LYS SEQRES 14 A 903 LEU GLN GLU GLN GLY GLY ASP GLU VAL PRO SER GLU ILE SEQRES 15 A 903 ILE ASP LYS ILE ILE TYR MET PRO PHE ASP ASN GLU LYS SEQRES 16 A 903 GLU LEU LEU MET GLU TYR LEU ASN PHE TRP GLN GLN LYS SEQRES 17 A 903 THR PRO VAL ILE LEU THR GLY TRP ASN VAL GLU SER PHE SEQRES 18 A 903 ALA ILE PRO TYR VAL TYR ASN ARG ILE LYS ASN ILE PHE SEQRES 19 A 903 GLY GLU SER THR ALA LYS ARG LEU SER PRO HIS ARG LYS SEQRES 20 A 903 THR ARG VAL LYS VAL ILE GLU ASN MET TYR GLY SER ARG SEQRES 21 A 903 GLU ILE ILE THR LEU PHE GLY ILE SER VAL LEU ASP TYR SEQRES 22 A 903 ILE ASP LEU TYR LYS LYS PHE SER PHE THR ASN GLN PRO SEQRES 23 A 903 SER TYR SER LEU ASP TYR ILE SER GLU PHE GLU LEU ASN SEQRES 24 A 903 VAL GLY LYS LEU LYS TYR ASP GLY PRO ILE SER LYS LEU SEQRES 25 A 903 ARG GLU SER ASN HIS GLN ARG TYR ILE SER TYR ASN ILE SEQRES 26 A 903 ILE ALA VAL TYR ARG VAL LEU GLN ILE ASP ALA LYS ARG SEQRES 27 A 903 GLN PHE ILE ASN LEU SER LEU ASP MET GLY TYR TYR ALA SEQRES 28 A 903 LYS ILE GLN ILE GLN SER VAL PHE SER PRO ILE LYS THR SEQRES 29 A 903 TRP ASP ALA ILE ILE PHE ASN SER LEU LYS GLU GLN ASN SEQRES 30 A 903 LYS VAL ILE PRO GLN GLY ARG SER HIS PRO VAL GLN PRO SEQRES 31 A 903 TYR PRO GLY ALA PHE VAL LYS GLU PRO ILE PRO ASN ARG SEQRES 32 A 903 TYR LYS TYR VAL MET SER PHE ASP LEU THR SER PHE TYR SEQRES 33 A 903 PRO SER ILE ILE ARG GLN VAL ASN ILE SER PRO GLU THR SEQRES 34 A 903 ILE ALA GLY THR PHE LYS VAL ALA PRO LEU HIS ASP TYR SEQRES 35 A 903 ILE ASN ALA VAL ALA GLU ARG PRO SER ASP VAL TYR SER SEQRES 36 A 903 CYS SER PRO ASN GLY MET MET TYR TYR LYS ASP ARG ASP SEQRES 37 A 903 GLY VAL VAL PRO THR GLU ILE THR LYS VAL PHE ASN GLN SEQRES 38 A 903 ARG LYS GLU HIS LYS GLY TYR MET LEU ALA ALA GLN ARG SEQRES 39 A 903 ASN GLY GLU ILE ILE LYS GLU ALA LEU HIS ASN PRO ASN SEQRES 40 A 903 LEU SER VAL ASP GLU PRO LEU ASP VAL ASP TYR ARG PHE SEQRES 41 A 903 ASP PHE SER ASP GLU ILE LYS GLU LYS ILE LYS LYS LEU SEQRES 42 A 903 SER ALA LYS SER LEU ASN GLU MET LEU PHE ARG ALA GLN SEQRES 43 A 903 ARG THR GLU VAL ALA GLY MET THR ALA GLN ILE ASN ARG SEQRES 44 A 903 LYS LEU LEU ILE ASN SER LEU TYR GLY ALA LEU GLY ASN SEQRES 45 A 903 VAL TRP PHE ARG TYR TYR ASP LEU ARG ASN ALA THR ALA SEQRES 46 A 903 ILE THR THR PHE GLY GLN MET ALA LEU GLN TRP ILE GLU SEQRES 47 A 903 ARG LYS VAL ASN GLU TYR LEU ASN GLU VAL CYS GLY THR SEQRES 48 A 903 GLU GLY GLU ALA PHE VAL LEU TYR GLY ASP THR ASP SER SEQRES 49 A 903 ILE TYR VAL SER ALA ASP LYS ILE ILE ASP LYS VAL GLY SEQRES 50 A 903 GLU SER LYS PHE ARG ASP THR ASN HIS TRP VAL ASP PHE SEQRES 51 A 903 LEU ASP LYS PHE ALA ARG GLU ARG MET GLU PRO ALA ILE SEQRES 52 A 903 ASP ARG GLY PHE ARG GLU MET CYS GLU TYR MET ASN ASN SEQRES 53 A 903 LYS GLN HIS LEU MET PHE MET ASP ARG GLU ALA ILE ALA SEQRES 54 A 903 GLY PRO PRO LEU GLY SER LYS GLY ILE GLY GLY PHE TRP SEQRES 55 A 903 THR GLY LYS LYS ARG TYR ALA LEU ASN VAL TRP ASP MET SEQRES 56 A 903 GLU GLY THR ARG TYR ALA GLU PRO LYS LEU LYS ILE MET SEQRES 57 A 903 GLY LEU GLU THR GLN LYS SER SER THR PRO LYS ALA VAL SEQRES 58 A 903 GLN LYS ALA LEU LYS GLU CYS ILE ARG ARG MET LEU GLN SEQRES 59 A 903 GLU GLY GLU GLU SER LEU GLN GLU TYR PHE LYS GLU PHE SEQRES 60 A 903 GLU LYS GLU PHE ARG GLN LEU ASN TYR ILE SER ILE ALA SEQRES 61 A 903 SER VAL SER SER ALA ASN ASN ILE ALA LYS TYR ASP VAL SEQRES 62 A 903 GLY GLY PHE PRO GLY PRO LYS CYS PRO PHE HIS ILE ARG SEQRES 63 A 903 GLY ILE LEU THR TYR ASN ARG ALA ILE LYS GLY ASN ILE SEQRES 64 A 903 ASP ALA PRO GLN VAL VAL GLU GLY GLU LYS VAL TYR VAL SEQRES 65 A 903 LEU PRO LEU ARG GLU GLY ASN PRO PHE GLY ASP LYS CYS SEQRES 66 A 903 ILE ALA TRP PRO SER GLY THR GLU ILE THR ASP LEU ILE SEQRES 67 A 903 LYS ASP ASP VAL LEU HIS TRP MET ASP TYR THR VAL LEU SEQRES 68 A 903 LEU GLU LYS THR PHE ILE LYS PRO LEU GLU GLY PHE THR SEQRES 69 A 903 SER ALA ALA LYS LEU ASP TYR GLU LYS LYS ALA SER LEU SEQRES 70 A 903 PHE ASP MET PHE ASP PHE SEQRES 1 T 18 DA DC DA G G DT DA DA DG DC DA DG DT SEQRES 2 T 18 DC DC DG DC DG SEQRES 1 P 14 DG DC DG DG DA DC DT DG DC DT DT DA DC SEQRES 2 P 14 DC HET TTP A1001 29 HET CA A1002 1 HET CA A1003 1 HET CA A1004 1 HET CA A1005 1 HET CA A1006 1 HET CA A1007 1 HET NA A1008 1 HET NA A1009 1 HET PO4 A1010 5 HETNAM TTP THYMIDINE-5'-TRIPHOSPHATE HETNAM CA CALCIUM ION HETNAM NA SODIUM ION HETNAM PO4 PHOSPHATE ION FORMUL 4 TTP C10 H17 N2 O14 P3 FORMUL 5 CA 6(CA 2+) FORMUL 11 NA 2(NA 1+) FORMUL 13 PO4 O4 P 3- FORMUL 14 HOH *169(H2 O) HELIX 1 1 ASN A 64 GLY A 79 1 16 HELIX 2 2 ASP A 87 TYR A 97 1 11 HELIX 3 3 ASP A 104 ILE A 108 5 5 HELIX 4 4 SER A 163 LYS A 169 1 7 HELIX 5 5 LEU A 170 GLY A 174 5 5 HELIX 6 6 PRO A 179 ASP A 184 1 6 HELIX 7 7 ASN A 193 LYS A 208 1 16 HELIX 8 8 PHE A 221 GLY A 235 1 15 HELIX 9 9 GLY A 235 LYS A 240 1 6 HELIX 10 10 ARG A 241 SER A 243 5 3 HELIX 11 11 ASP A 272 SER A 281 1 10 HELIX 12 12 SER A 289 ASN A 299 1 11 HELIX 13 13 PRO A 308 SER A 310 5 3 HELIX 14 14 LYS A 311 ASN A 316 1 6 HELIX 15 15 ASN A 316 GLN A 339 1 24 HELIX 16 16 GLN A 339 LYS A 352 1 14 HELIX 17 17 GLN A 354 PHE A 359 5 6 HELIX 18 18 SER A 360 GLN A 376 1 17 HELIX 19 19 SER A 414 ASN A 424 1 11 HELIX 20 20 PRO A 438 ASN A 444 1 7 HELIX 21 21 GLY A 469 LEU A 503 1 35 HELIX 22 22 SER A 523 LYS A 531 1 9 HELIX 23 23 SER A 534 LEU A 570 1 37 HELIX 24 24 ASP A 579 CYS A 609 1 31 HELIX 25 25 ALA A 629 LYS A 635 1 7 HELIX 26 26 GLY A 637 PHE A 641 5 5 HELIX 27 27 ASP A 643 ARG A 658 1 16 HELIX 28 28 ARG A 658 MET A 674 1 17 HELIX 29 29 LEU A 730 LYS A 734 5 5 HELIX 30 30 PRO A 738 GLU A 755 1 18 HELIX 31 31 GLY A 756 PHE A 771 1 16 HELIX 32 32 ARG A 772 LEU A 774 5 3 HELIX 33 33 TYR A 776 ALA A 780 5 5 HELIX 34 34 ILE A 788 LYS A 790 5 3 HELIX 35 35 PRO A 802 ILE A 815 1 14 HELIX 36 36 THR A 855 MET A 866 1 12 HELIX 37 37 ASP A 867 PHE A 876 1 10 HELIX 38 38 PHE A 876 ALA A 887 1 12 HELIX 39 39 SER A 896 PHE A 901 5 6 SHEET 1 A 3 PHE A 4 ILE A 11 0 SHEET 2 A 3 SER A 14 ILE A 20 -1 O ARG A 18 N LEU A 6 SHEET 3 A 3 GLU A 26 VAL A 31 -1 O ARG A 27 N TYR A 19 SHEET 1 B 4 SER A 36 HIS A 40 0 SHEET 2 B 4 PRO A 56 LEU A 61 -1 O THR A 58 N ALA A 39 SHEET 3 B 4 TYR A 49 ASP A 51 -1 N TYR A 49 O CYS A 57 SHEET 4 B 4 LYS A 378 VAL A 379 1 O VAL A 379 N PHE A 50 SHEET 1 C 6 ILE A 186 PHE A 191 0 SHEET 2 C 6 ARG A 145 LEU A 151 1 N PHE A 146 O ILE A 187 SHEET 3 C 6 ILE A 133 ASP A 140 -1 N ILE A 136 O PHE A 149 SHEET 4 C 6 VAL A 110 VAL A 117 -1 N ASN A 112 O TYR A 139 SHEET 5 C 6 ILE A 212 THR A 214 1 O ILE A 212 N ALA A 111 SHEET 6 C 6 SER A 269 VAL A 270 1 O SER A 269 N LEU A 213 SHEET 1 D 2 ASN A 153 SER A 154 0 SHEET 2 D 2 GLY A 157 ASN A 158 -1 O GLY A 157 N SER A 154 SHEET 1 E 2 THR A 248 VAL A 252 0 SHEET 2 E 2 GLU A 261 LEU A 265 -1 O ILE A 262 N LYS A 251 SHEET 1 F 7 ASN A 402 ARG A 403 0 SHEET 2 F 7 GLY A 700 GLY A 704 -1 O TRP A 702 N ASN A 402 SHEET 3 F 7 ARG A 707 MET A 715 -1 O ARG A 707 N THR A 703 SHEET 4 F 7 MET A 683 ALA A 689 -1 N ILE A 688 O TRP A 713 SHEET 5 F 7 VAL A 407 LEU A 412 -1 N SER A 409 O GLU A 686 SHEET 6 F 7 SER A 624 SER A 628 -1 O VAL A 627 N MET A 408 SHEET 7 F 7 VAL A 617 ASP A 621 -1 N LEU A 618 O TYR A 626 SHEET 1 G 4 ASN A 402 ARG A 403 0 SHEET 2 G 4 GLY A 700 GLY A 704 -1 O TRP A 702 N ASN A 402 SHEET 3 G 4 ARG A 707 MET A 715 -1 O ARG A 707 N THR A 703 SHEET 4 G 4 THR A 718 MET A 728 -1 O LYS A 726 N LEU A 710 SHEET 1 H 3 ILE A 430 THR A 433 0 SHEET 2 H 3 MET A 461 TYR A 463 -1 O MET A 462 N ALA A 431 SHEET 3 H 3 SER A 455 CYS A 456 -1 N SER A 455 O TYR A 463 SHEET 1 I 3 SER A 781 SER A 784 0 SHEET 2 I 3 LYS A 829 PRO A 834 -1 O VAL A 830 N SER A 783 SHEET 3 I 3 CYS A 845 PRO A 849 -1 O TRP A 848 N TYR A 831 SHEET 1 J 2 ASP A 792 VAL A 793 0 SHEET 2 J 2 PHE A 796 PRO A 797 -1 O PHE A 796 N VAL A 793 LINK OE2 GLU A 116 CA CA A1004 1555 1555 2.51 LINK OE1 GLU A 116 CA CA A1004 1555 1555 2.56 LINK OE1 GLU A 172 CA CA A1006 1555 1555 2.98 LINK OE2 GLU A 177 CA CA A1006 1555 1555 2.72 LINK OD2 ASP A 192 CA CA A1007 1555 1555 2.73 LINK OE2 GLU A 196 CA CA A1007 1555 1555 2.47 LINK OE1 GLU A 196 CA CA A1007 1555 1555 2.89 LINK OD2 ASP A 411 CA CA A1002 1555 1555 2.36 LINK OD1 ASP A 411 CA CA A1002 1555 1555 2.43 LINK OD1 ASP A 411 CA CA A1003 1555 1555 2.81 LINK O LEU A 412 CA CA A1002 1555 1555 2.38 LINK O ASN A 505 NA NA A1008 1555 1555 2.33 LINK OD1 ASN A 507 NA NA A1008 1555 1555 2.74 LINK O LYS A 531 NA NA A1008 1555 1555 2.36 LINK OD2 ASP A 623 CA CA A1002 1555 1555 2.34 LINK OD1 ASP A 623 CA CA A1003 1555 1555 3.08 LINK OD1 ASP A 684 CA CA A1005 1555 1555 3.03 LINK O1G TTP A1001 CA CA A1002 1555 1555 2.34 LINK O2B TTP A1001 CA CA A1002 1555 1555 2.36 LINK O2A TTP A1001 CA CA A1002 1555 1555 2.40 LINK O2A TTP A1001 CA CA A1003 1555 1555 2.66 LINK CA CA A1003 O HOH A1168 1555 1555 2.52 LINK CA CA A1004 O HOH A1126 1555 1555 2.52 LINK CA CA A1004 O HOH A1240 1555 1555 2.54 LINK CA CA A1005 O HOH A1251 1555 1555 2.72 LINK CA CA A1006 O HOH A1202 1555 1555 2.80 SITE 1 AC1 18 ASP A 411 LEU A 412 THR A 413 SER A 414 SITE 2 AC1 18 PHE A 415 TYR A 416 ARG A 482 LYS A 560 SITE 3 AC1 18 ASN A 564 TYR A 567 ASP A 623 CA A1002 SITE 4 AC1 18 CA A1003 HOH A1101 HOH A1148 DC P 115 SITE 5 AC1 18 DA T 3 G T 4 SITE 1 AC2 4 ASP A 411 LEU A 412 ASP A 623 TTP A1001 SITE 1 AC3 4 ASP A 411 ASP A 623 TTP A1001 HOH A1168 SITE 1 AC4 3 GLU A 116 HOH A1126 HOH A1240 SITE 1 AC5 3 GLU A 660 ASP A 684 HOH A1251 SITE 1 AC6 4 GLU A 172 GLU A 177 GLN A 389 HOH A1202 SITE 1 AC7 4 ASP A 192 GLU A 196 ASP A 856 ASP A 860 SITE 1 AC8 3 ASN A 505 ASN A 507 LYS A 531 SITE 1 AC9 2 SER A 220 ASP A 275 SITE 1 BC1 4 SER A 127 GLN A 128 LYS A 231 ASN A 232 CRYST1 80.853 118.400 127.970 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012368 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008446 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007814 0.00000