PDB Short entry for 4KLD
HEADER    TRANSFERASE, LYASE/DNA                  07-MAY-13   4KLD              
TITLE     DNA POLYMERASE BETA MATCHED SUBSTRATE COMPLEX WITH CA2+, 0 S          
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: 5'-D(*CP*CP*GP*AP*CP*GP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3';  
COMPND   3 CHAIN: T;                                                            
COMPND   4 ENGINEERED: YES;                                                     
COMPND   5 MOL_ID: 2;                                                           
COMPND   6 MOLECULE: 5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*C)-3';                    
COMPND   7 CHAIN: P;                                                            
COMPND   8 ENGINEERED: YES;                                                     
COMPND   9 MOL_ID: 3;                                                           
COMPND  10 MOLECULE: 5'-D(P*GP*TP*CP*GP*G)-3';                                  
COMPND  11 CHAIN: D;                                                            
COMPND  12 ENGINEERED: YES;                                                     
COMPND  13 MOL_ID: 4;                                                           
COMPND  14 MOLECULE: DNA POLYMERASE BETA;                                       
COMPND  15 CHAIN: A;                                                            
COMPND  16 EC: 2.7.7.7, 4.2.99.-;                                               
COMPND  17 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 SYNTHETIC: YES;                                                      
SOURCE   3 MOL_ID: 2;                                                           
SOURCE   4 SYNTHETIC: YES;                                                      
SOURCE   5 MOL_ID: 3;                                                           
SOURCE   6 SYNTHETIC: YES;                                                      
SOURCE   7 MOL_ID: 4;                                                           
SOURCE   8 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   9 ORGANISM_COMMON: HUMAN;                                              
SOURCE  10 ORGANISM_TAXID: 9606;                                                
SOURCE  11 GENE: POLB;                                                          
SOURCE  12 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE  13 EXPRESSION_SYSTEM_TAXID: 562;                                        
SOURCE  14 EXPRESSION_SYSTEM_STRAIN: TAP56;                                     
SOURCE  15 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;                              
SOURCE  16 EXPRESSION_SYSTEM_PLASMID: PWL11                                     
KEYWDS    DNA POLYMERASE, TRANSFERASE, LYASE-DNA COMPLEX                        
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    B.D.FREUDENTHAL,W.A.BEARD,D.D.SHOCK,S.H.WILSON                        
REVDAT   2   15-NOV-17 4KLD    1       REMARK                                   
REVDAT   1   17-JUL-13 4KLD    0                                                
JRNL        AUTH   B.D.FREUDENTHAL,W.A.BEARD,D.D.SHOCK,S.H.WILSON               
JRNL        TITL   OBSERVING A DNA POLYMERASE CHOOSE RIGHT FROM WRONG.          
JRNL        REF    CELL(CAMBRIDGE,MASS.)         V. 154   157 2013              
JRNL        REFN                   ISSN 0092-8674                               
JRNL        PMID   23827680                                                     
JRNL        DOI    10.1016/J.CELL.2013.05.048                                   
REMARK   2                                                                      
REMARK   2 RESOLUTION.    1.92 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : PHENIX 1.7_650                                       
REMARK   3   AUTHORS     : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN            
REMARK   3               : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE,           
REMARK   3               : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER,            
REMARK   3               : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY,              
REMARK   3               : REETAL PAI,RANDY READ,JANE RICHARDSON,               
REMARK   3               : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI,           
REMARK   3               : NICHOLAS SAUTER,JACOB SMITH,LAURENT                  
REMARK   3               : STORONI,TOM TERWILLIGER,PETER ZWART                  
REMARK   3                                                                      
REMARK   3    REFINEMENT TARGET : ML                                            
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 1.92                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 23.15                          
REMARK   3   MIN(FOBS/SIGMA_FOBS)              : 0.000                          
REMARK   3   COMPLETENESS FOR RANGE        (%) : 87.2                           
REMARK   3   NUMBER OF REFLECTIONS             : 28482                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   R VALUE     (WORKING + TEST SET) : 0.202                           
REMARK   3   R VALUE            (WORKING SET) : 0.197                           
REMARK   3   FREE R VALUE                     : 0.251                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 10.000                          
REMARK   3   FREE R VALUE TEST SET COUNT      : 2848                            
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT (IN BINS).                           
REMARK   3   BIN  RESOLUTION RANGE  COMPL.    NWORK NFREE   RWORK  RFREE        
REMARK   3     1 23.1488 -  5.1818    1.00     1518   161  0.1849 0.1884        
REMARK   3     2  5.1818 -  4.1205    0.91     1351   143  0.1574 0.2187        
REMARK   3     3  4.1205 -  3.6019    0.92     1367   140  0.1665 0.2236        
REMARK   3     4  3.6019 -  3.2736    0.99     1476   145  0.1879 0.2361        
REMARK   3     5  3.2736 -  3.0395    0.99     1444   173  0.2018 0.2585        
REMARK   3     6  3.0395 -  2.8606    0.98     1438   162  0.2126 0.2663        
REMARK   3     7  2.8606 -  2.7176    0.97     1424   157  0.2241 0.2910        
REMARK   3     8  2.7176 -  2.5994    0.96     1422   150  0.2348 0.2581        
REMARK   3     9  2.5994 -  2.4995    0.95     1383   150  0.2286 0.3095        
REMARK   3    10  2.4995 -  2.4133    0.95     1383   158  0.2268 0.3350        
REMARK   3    11  2.4133 -  2.3380    0.97     1419   176  0.2130 0.2663        
REMARK   3    12  2.3380 -  2.2712    0.92     1339   147  0.2089 0.2704        
REMARK   3    13  2.2712 -  2.2114    0.95     1366   169  0.2110 0.2703        
REMARK   3    14  2.2114 -  2.1575    0.92     1374   146  0.2111 0.2747        
REMARK   3    15  2.1575 -  2.1085    0.89     1299   152  0.2145 0.3224        
REMARK   3    16  2.1085 -  2.0637    0.88     1260   163  0.2244 0.2898        
REMARK   3    17  2.0637 -  2.0224    0.82     1210   129  0.2423 0.3167        
REMARK   3    18  2.0224 -  1.9843    0.80     1174   120  0.2461 0.2917        
REMARK   3    19  1.9843 -  1.9489    0.52      771    80  0.2421 0.3566        
REMARK   3    20  1.9489 -  1.9160    0.15      216    27  0.2603 0.3028        
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELLING.                                             
REMARK   3   METHOD USED        : FLAT BULK SOLVENT MODEL                       
REMARK   3   SOLVENT RADIUS     : 1.10                                          
REMARK   3   SHRINKAGE RADIUS   : 0.83                                          
REMARK   3   K_SOL              : 0.40                                          
REMARK   3   B_SOL              : 60.96                                         
REMARK   3                                                                      
REMARK   3  ERROR ESTIMATES.                                                    
REMARK   3   COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED)     : 0.300            
REMARK   3   PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.200           
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : NULL                           
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : 34.14                          
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : 4.40480                                              
REMARK   3    B22 (A**2) : -0.59560                                             
REMARK   3    B33 (A**2) : -3.80930                                             
REMARK   3    B12 (A**2) : 0.00000                                              
REMARK   3    B13 (A**2) : -0.54540                                             
REMARK   3    B23 (A**2) : 0.00000                                              
REMARK   3                                                                      
REMARK   3  TWINNING INFORMATION.                                               
REMARK   3   FRACTION: NULL                                                     
REMARK   3   OPERATOR: NULL                                                     
REMARK   3                                                                      
REMARK   3  DEVIATIONS FROM IDEAL VALUES.                                       
REMARK   3                 RMSD          COUNT                                  
REMARK   3   BOND      :  0.011           3473                                  
REMARK   3   ANGLE     :  1.237           4829                                  
REMARK   3   CHIRALITY :  0.072            522                                  
REMARK   3   PLANARITY :  0.004            508                                  
REMARK   3   DIHEDRAL  : 19.291           1344                                  
REMARK   3                                                                      
REMARK   3  TLS DETAILS                                                         
REMARK   3   NUMBER OF TLS GROUPS  : NULL                                       
REMARK   3                                                                      
REMARK   3  NCS DETAILS                                                         
REMARK   3   NUMBER OF NCS GROUPS : NULL                                        
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 4KLD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-MAY-13.                  
REMARK 100 THE DEPOSITION ID IS D_1000079483.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 13-AUG-12                          
REMARK 200  TEMPERATURE           (KELVIN) : 100                                
REMARK 200  PH                             : 8.0                                
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : N                                  
REMARK 200  RADIATION SOURCE               : ROTATING ANODE                     
REMARK 200  BEAMLINE                       : NULL                               
REMARK 200  X-RAY GENERATOR MODEL          : RIGAKU MICROMAX-007 HF             
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 1.54178                            
REMARK 200  MONOCHROMATOR                  : MIRRORS                            
REMARK 200  OPTICS                         : MIRRORS                            
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : CCD                                
REMARK 200  DETECTOR MANUFACTURER          : RIGAKU SATURN 92                   
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : DENZO                              
REMARK 200  DATA SCALING SOFTWARE          : SCALEPACK                          
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 30191                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 1.916                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 50.000                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : -3.000                             
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 97.7                               
REMARK 200  DATA REDUNDANCY                : 4.600                              
REMARK 200  R MERGE                    (I) : 0.06400                            
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 15.6000                            
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.92                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 1.99                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 92.0                               
REMARK 200  DATA REDUNDANCY IN SHELL       : 2.60                               
REMARK 200  R MERGE FOR SHELL          (I) : 0.48300                            
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : NULL                               
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT        
REMARK 200 SOFTWARE USED: NULL                                                  
REMARK 200 STARTING MODEL: PDB ENTRY 3C2M                                       
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 45.59                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.26                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: 50 MM IMIDAZOLE, 350 MM SODIUM           
REMARK 280  CHLORIDE, 17% PEG3350, PH 8.0, VAPOR DIFFUSION, TEMPERATURE 291K    
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1                         
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -X,Y+1/2,-Z                                             
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   2  0.000000  1.000000  0.000000       40.20000            
REMARK 290   SMTRY3   2  0.000000  0.000000 -1.000000        0.00000            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC                        
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC                 
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 TOTAL BURIED SURFACE AREA: 6230 ANGSTROM**2                          
REMARK 350 SURFACE AREA OF THE COMPLEX: 20480 ANGSTROM**2                       
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -123.0 KCAL/MOL                       
REMARK 350 APPLY THE FOLLOWING TO CHAINS: T, P, D, A                            
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     MET A     1                                                      
REMARK 465     SER A     2                                                      
REMARK 465     LYS A     3                                                      
REMARK 465     ARG A     4                                                      
REMARK 465     LYS A     5                                                      
REMARK 465     ALA A     6                                                      
REMARK 465     PRO A     7                                                      
REMARK 465     GLN A     8                                                      
REMARK 465     GLU A     9                                                      
REMARK 470                                                                      
REMARK 470 MISSING ATOM                                                         
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;           
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;          
REMARK 470 I=INSERTION CODE):                                                   
REMARK 470   M RES CSSEQI  ATOMS                                                
REMARK 470     LYS A 248    CG   CD   CE   NZ                                   
REMARK 470     VAL A 303    CG1  CG2                                            
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES                                       
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)              
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   ATM2   ATM3                                     
REMARK 500     DA P   5   O4' -  C1' -  N9  ANGL. DEV. =   2.8 DEGREES          
REMARK 500     DT D   2   O4' -  C1' -  N1  ANGL. DEV. =  -4.5 DEGREES          
REMARK 500     DG D   5   O4' -  C1' -  N9  ANGL. DEV. =   2.9 DEGREES          
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    LYS A 120       26.90   -154.51                                   
REMARK 500    CYS A 178     -151.11   -115.96                                   
REMARK 500    SER A 275     -179.77    -69.84                                   
REMARK 500    ASN A 294     -165.63   -124.33                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 620                                                                      
REMARK 620 METAL COORDINATION                                                   
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):                             
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              CA A 402  CA                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 DCP A 401   O3G                                                    
REMARK 620 2 ASP A 190   OD1  97.5                                              
REMARK 620 3 DCP A 401   O2A  91.9  81.5                                        
REMARK 620 4 ASP A 192   OD2 166.6  95.8  88.3                                  
REMARK 620 5 DCP A 401   O2B  77.4 158.9  78.3  89.5                            
REMARK 620 6 HOH A 529   O    88.0 124.9 153.4  85.9  75.8                      
REMARK 620 7 ASP A 190   O    97.8  68.0 148.9  88.8 132.7  56.9                
REMARK 620 N                    1     2     3     4     5     6                 
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              NA A 405  NA                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 HOH D 101   O                                                      
REMARK 620 2 VAL A  65   O    84.5                                              
REMARK 620 3 LYS A  60   O    84.1  86.8                                        
REMARK 620 4 HOH A 567   O   102.6 172.8  93.9                                  
REMARK 620 5  DC D   3   OP1  94.5  90.3 176.8  89.2                            
REMARK 620 6 LEU A  62   O   172.6  94.1  88.6  78.8  92.8                      
REMARK 620 N                    1     2     3     4     5                       
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              NA A 404  NA                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 THR A 101   O                                                      
REMARK 620 2  DG P   9   OP1 174.7                                              
REMARK 620 3 HOH A 531   O    83.8  93.8                                        
REMARK 620 4 ILE A 106   O    89.2  94.0 167.1                                  
REMARK 620 5 VAL A 103   O    93.6  90.8  82.1  87.6                            
REMARK 620 6 HOH P 111   O    79.9  96.4 109.1  80.1 166.1                      
REMARK 620 N                    1     2     3     4     5                       
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              CA A 403  CA                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 ASP A 256   OD2                                                    
REMARK 620 2 ASP A 192   OD1  91.5                                              
REMARK 620 3 ASP A 190   OD2  88.2 123.5                                        
REMARK 620 4 DCP A 401   O2A 161.6  84.2 109.1                                  
REMARK 620 5 ASP A 190   OD1 127.3  87.5  51.0  70.6                            
REMARK 620 6  DC P  10   O3'  73.4  81.6 149.9  88.2 157.1                      
REMARK 620 7 HOH A 528   O   102.4 153.1  80.3  75.3 101.5  80.6                
REMARK 620 N                    1     2     3     4     5     6                 
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DCP A 401                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC2                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 402                  
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC3                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 403                  
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC4                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 404                  
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC5                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 405                  
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC6                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 406                  
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC7                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 407                  
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC8                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 408                  
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC9                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 409                  
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 4KLE   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 4KLF   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 4KLG   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 4KLH   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 4KLI   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 4KLJ   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 4KLL   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 4KLM   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 4KLO   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 4KLP   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 4KLQ   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 4KLS   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 4KLT   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 4KLU   RELATED DB: PDB                                   
DBREF  4KLD A    1   335  UNP    P06746   DPOLB_HUMAN      1    335             
DBREF  4KLD T    1    16  PDB    4KLD     4KLD             1     16             
DBREF  4KLD P    1    10  PDB    4KLD     4KLD             1     10             
DBREF  4KLD D    1     5  PDB    4KLD     4KLD             1      5             
SEQRES   1 T   16   DC  DC  DG  DA  DC  DG  DG  DC  DG  DC  DA  DT  DC          
SEQRES   2 T   16   DA  DG  DC                                                  
SEQRES   1 P   10   DG  DC  DT  DG  DA  DT  DG  DC  DG  DC                      
SEQRES   1 D    5   DG  DT  DC  DG  DG                                          
SEQRES   1 A  335  MET SER LYS ARG LYS ALA PRO GLN GLU THR LEU ASN GLY          
SEQRES   2 A  335  GLY ILE THR ASP MET LEU THR GLU LEU ALA ASN PHE GLU          
SEQRES   3 A  335  LYS ASN VAL SER GLN ALA ILE HIS LYS TYR ASN ALA TYR          
SEQRES   4 A  335  ARG LYS ALA ALA SER VAL ILE ALA LYS TYR PRO HIS LYS          
SEQRES   5 A  335  ILE LYS SER GLY ALA GLU ALA LYS LYS LEU PRO GLY VAL          
SEQRES   6 A  335  GLY THR LYS ILE ALA GLU LYS ILE ASP GLU PHE LEU ALA          
SEQRES   7 A  335  THR GLY LYS LEU ARG LYS LEU GLU LYS ILE ARG GLN ASP          
SEQRES   8 A  335  ASP THR SER SER SER ILE ASN PHE LEU THR ARG VAL SER          
SEQRES   9 A  335  GLY ILE GLY PRO SER ALA ALA ARG LYS PHE VAL ASP GLU          
SEQRES  10 A  335  GLY ILE LYS THR LEU GLU ASP LEU ARG LYS ASN GLU ASP          
SEQRES  11 A  335  LYS LEU ASN HIS HIS GLN ARG ILE GLY LEU LYS TYR PHE          
SEQRES  12 A  335  GLY ASP PHE GLU LYS ARG ILE PRO ARG GLU GLU MET LEU          
SEQRES  13 A  335  GLN MET GLN ASP ILE VAL LEU ASN GLU VAL LYS LYS VAL          
SEQRES  14 A  335  ASP SER GLU TYR ILE ALA THR VAL CYS GLY SER PHE ARG          
SEQRES  15 A  335  ARG GLY ALA GLU SER SER GLY ASP MET ASP VAL LEU LEU          
SEQRES  16 A  335  THR HIS PRO SER PHE THR SER GLU SER THR LYS GLN PRO          
SEQRES  17 A  335  LYS LEU LEU HIS GLN VAL VAL GLU GLN LEU GLN LYS VAL          
SEQRES  18 A  335  HIS PHE ILE THR ASP THR LEU SER LYS GLY GLU THR LYS          
SEQRES  19 A  335  PHE MET GLY VAL CYS GLN LEU PRO SER LYS ASN ASP GLU          
SEQRES  20 A  335  LYS GLU TYR PRO HIS ARG ARG ILE ASP ILE ARG LEU ILE          
SEQRES  21 A  335  PRO LYS ASP GLN TYR TYR CYS GLY VAL LEU TYR PHE THR          
SEQRES  22 A  335  GLY SER ASP ILE PHE ASN LYS ASN MET ARG ALA HIS ALA          
SEQRES  23 A  335  LEU GLU LYS GLY PHE THR ILE ASN GLU TYR THR ILE ARG          
SEQRES  24 A  335  PRO LEU GLY VAL THR GLY VAL ALA GLY GLU PRO LEU PRO          
SEQRES  25 A  335  VAL ASP SER GLU LYS ASP ILE PHE ASP TYR ILE GLN TRP          
SEQRES  26 A  335  LYS TYR ARG GLU PRO LYS ASP ARG SER GLU                      
HET    DCP  A 401      28                                                       
HET     CA  A 402       1                                                       
HET     CA  A 403       1                                                       
HET     NA  A 404       1                                                       
HET     NA  A 405       1                                                       
HET     CL  A 406       1                                                       
HET     CL  A 407       1                                                       
HET     CL  A 408       1                                                       
HET     CL  A 409       1                                                       
HETNAM     DCP 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE                                 
HETNAM      CA CALCIUM ION                                                      
HETNAM      NA SODIUM ION                                                       
HETNAM      CL CHLORIDE ION                                                     
FORMUL   5  DCP    C9 H16 N3 O13 P3                                             
FORMUL   6   CA    2(CA 2+)                                                     
FORMUL   8   NA    2(NA 1+)                                                     
FORMUL  10   CL    4(CL 1-)                                                     
FORMUL  14  HOH   *197(H2 O)                                                    
HELIX    1   1 ASN A   12  VAL A   29  1                                  18    
HELIX    2   2 ALA A   32  LYS A   48  1                                  17    
HELIX    3   3 SER A   55  LYS A   61  1                                   7    
HELIX    4   4 GLY A   66  GLY A   80  1                                  15    
HELIX    5   5 LEU A   82  ASP A   91  1                                  10    
HELIX    6   6 ASP A   91  THR A  101  1                                  11    
HELIX    7   7 GLY A  107  GLU A  117  1                                  11    
HELIX    8   8 THR A  121  LYS A  127  1                                   7    
HELIX    9   9 ASN A  128  LEU A  132  5                                   5    
HELIX   10  10 ASN A  133  TYR A  142  1                                  10    
HELIX   11  11 TYR A  142  LYS A  148  1                                   7    
HELIX   12  12 ARG A  152  ASP A  170  1                                  19    
HELIX   13  13 LYS A  209  VAL A  221  1                                  13    
HELIX   14  14 PRO A  261  ASP A  263  5                                   3    
HELIX   15  15 GLN A  264  GLY A  274  1                                  11    
HELIX   16  16 SER A  275  LYS A  289  1                                  15    
HELIX   17  17 SER A  315  ILE A  323  1                                   9    
HELIX   18  18 GLU A  329  ARG A  333  5                                   5    
SHEET    1   A 2 ILE A 150  PRO A 151  0                                        
SHEET    2   A 2 SER A 187  SER A 188 -1  O  SER A 188   N  ILE A 150           
SHEET    1   B 5 ILE A 174  VAL A 177  0                                        
SHEET    2   B 5 MET A 191  THR A 196 -1  O  LEU A 194   N  THR A 176           
SHEET    3   B 5 ARG A 253  LEU A 259  1  O  ASP A 256   N  VAL A 193           
SHEET    4   B 5 LYS A 234  CYS A 239 -1  N  PHE A 235   O  ILE A 257           
SHEET    5   B 5 ILE A 224  LYS A 230 -1  N  LEU A 228   O  MET A 236           
SHEET    1   C 2 PHE A 291  ILE A 293  0                                        
SHEET    2   C 2 ILE A 298  PRO A 300 -1  O  ARG A 299   N  THR A 292           
LINK         O3G DCP A 401                CA    CA A 402     1555   1555  2.19  
LINK         OD1 ASP A 190                CA    CA A 402     1555   1555  2.26  
LINK         O2A DCP A 401                CA    CA A 402     1555   1555  2.28  
LINK        NA    NA A 405                 O   HOH D 101     1555   1555  2.28  
LINK         O   THR A 101                NA    NA A 404     1555   1555  2.30  
LINK         O   VAL A  65                NA    NA A 405     1555   1555  2.37  
LINK         OD2 ASP A 256                CA    CA A 403     1555   1555  2.39  
LINK         OD1 ASP A 192                CA    CA A 403     1555   1555  2.39  
LINK         OD2 ASP A 192                CA    CA A 402     1555   1555  2.40  
LINK         OP1  DG P   9                NA    NA A 404     1555   1555  2.41  
LINK         O   LYS A  60                NA    NA A 405     1555   1555  2.41  
LINK        NA    NA A 404                 O   HOH A 531     1555   1555  2.44  
LINK         O2B DCP A 401                CA    CA A 402     1555   1555  2.47  
LINK         OD2 ASP A 190                CA    CA A 403     1555   1555  2.48  
LINK         O   ILE A 106                NA    NA A 404     1555   1555  2.54  
LINK         O2A DCP A 401                CA    CA A 403     1555   1555  2.54  
LINK        NA    NA A 405                 O   HOH A 567     1555   1555  2.55  
LINK         OP1  DC D   3                NA    NA A 405     1555   1555  2.59  
LINK         O   VAL A 103                NA    NA A 404     1555   1555  2.59  
LINK         OD1 ASP A 190                CA    CA A 403     1555   1555  2.59  
LINK         O3'  DC P  10                CA    CA A 403     1555   1555  2.64  
LINK        CA    CA A 403                 O   HOH A 528     1555   1555  2.65  
LINK        NA    NA A 404                 O   HOH P 111     1555   1555  2.66  
LINK         O   LEU A  62                NA    NA A 405     1555   1555  2.66  
LINK        CA    CA A 402                 O   HOH A 529     1555   1555  2.67  
LINK         O   ASP A 190                CA    CA A 402     1555   1555  3.06  
CISPEP   1 GLY A  274    SER A  275          0         0.56                     
SITE     1 AC1 19 ARG A 149  GLY A 179  SER A 180  ARG A 183                    
SITE     2 AC1 19 GLY A 189  ASP A 190  ASP A 192  TYR A 271                    
SITE     3 AC1 19 PHE A 272  THR A 273  GLY A 274  ASP A 276                    
SITE     4 AC1 19 ASN A 279   CA A 402   CA A 403  HOH A 516                    
SITE     5 AC1 19 HOH A 528   DC P  10   DG T   6                               
SITE     1 AC2  5 ASP A 190  ASP A 192  DCP A 401   CA A 403                    
SITE     2 AC2  5 HOH A 529                                                     
SITE     1 AC3  7 ASP A 190  ASP A 192  ASP A 256  DCP A 401                    
SITE     2 AC3  7  CA A 402  HOH A 528   DC P  10                               
SITE     1 AC4  6 THR A 101  VAL A 103  ILE A 106  HOH A 531                    
SITE     2 AC4  6  DG P   9  HOH P 111                                          
SITE     1 AC5  6 LYS A  60  LEU A  62  VAL A  65  HOH A 567                    
SITE     2 AC5  6  DC D   3  HOH D 101                                          
SITE     1 AC6  4 GLN A 264  TYR A 266  CYS A 267  VAL A 313                    
SITE     1 AC7  3 ALA A  32  HIS A  34  LYS A  35                               
SITE     1 AC8  2 LEU A  82  ARG A  89                                          
SITE     1 AC9  4 ASN A 294  THR A 297  ARG A 299  HOH A 625                    
CRYST1   50.800   80.400   55.500  90.00 107.90  90.00 P 1 21 1      2          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.019685  0.000000  0.006358        0.00000                         
SCALE2      0.000000  0.012438  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.018935        0.00000