PDB Short entry for 4KZL HEADER TRANSFERASE/TRANSFERASE INHIBITOR 30-MAY-13 4KZL TITLE CRYSTAL STRUCTURE OF HUMAN TANKYRASE 2 IN COMPLEX WITH 4'-FLUORO TITLE 2 FLAVONE COMPND MOL_ID: 1; COMPND 2 MOLECULE: TANKYRASE-2; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: C-TERMINAL FRAGMENT, UNP RESIDUES 946-1113; COMPND 5 SYNONYM: TANK2, ADP-RIBOSYLTRANSFERASE DIPHTHERIA TOXIN-LIKE 6, COMPND 6 ARTD6, POLY [ADP-RIBOSE] POLYMERASE 5B, TNKS-2, TRF1-INTERACTING COMPND 7 ANKYRIN-RELATED ADP-RIBOSE POLYMERASE 2, TANKYRASE II, TANKYRASE-LIKE COMPND 8 PROTEIN, TANKYRASE-RELATED PROTEIN; COMPND 9 EC: 2.4.2.30; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 2; COMPND 12 MOLECULE: TANKYRASE-2; COMPND 13 CHAIN: C, D; COMPND 14 FRAGMENT: C-TERMINAL FRAGMENT, UNP RESIDUES 1114-1162; COMPND 15 EC: 2.4.2.30; COMPND 16 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TNKS2, PARP5B, TANK2, TNKL; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ROSETTA 2(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PNIC-BSA4; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_COMMON: HUMAN; SOURCE 14 ORGANISM_TAXID: 9606; SOURCE 15 GENE: TNKS2, PARP5B, TANK2, TNKL; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 18 EXPRESSION_SYSTEM_STRAIN: ROSETTA 2(DE3); SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PNIC-BSA4 KEYWDS PROTEIN-LIGAND COMPLEX, DIPHTHERIA TOXIN LIKE FOLD, TRANSFERASE, ADP- KEYWDS 2 RIBOSYLATION, TRANSFERASE-TRANSFERASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR M.NARWAL,T.HAIKARAINEN,L.LEHTIO REVDAT 4 20-SEP-23 4KZL 1 REMARK LINK REVDAT 3 29-JAN-20 4KZL 1 REMARK SEQADV REVDAT 2 15-JAN-14 4KZL 1 JRNL REVDAT 1 30-OCT-13 4KZL 0 JRNL AUTH M.NARWAL,J.KOIVUNEN,T.HAIKARAINEN,E.OBAJI,O.E.LEGALA, JRNL AUTH 2 H.VENKANNAGARI,P.JOENSUU,T.PIHLAJANIEMI,L.LEHTIO JRNL TITL DISCOVERY OF TANKYRASE INHIBITING FLAVONES WITH INCREASED JRNL TITL 2 POTENCY AND ISOENZYME SELECTIVITY. JRNL REF J.MED.CHEM. V. 56 7880 2013 JRNL REFN ISSN 0022-2623 JRNL PMID 24116873 JRNL DOI 10.1021/JM401463Y REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.16 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 34607 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.174 REMARK 3 R VALUE (WORKING SET) : 0.172 REMARK 3 FREE R VALUE : 0.216 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1822 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2514 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.89 REMARK 3 BIN R VALUE (WORKING SET) : 0.2470 REMARK 3 BIN FREE R VALUE SET COUNT : 132 REMARK 3 BIN FREE R VALUE : 0.2870 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3347 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 64 REMARK 3 SOLVENT ATOMS : 264 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.82 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.29000 REMARK 3 B22 (A**2) : -2.08000 REMARK 3 B33 (A**2) : 1.80000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.151 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.143 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.097 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.537 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.958 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.934 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3494 ; 0.014 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 3195 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4705 ; 1.642 ; 1.949 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7328 ; 0.792 ; 3.002 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 413 ; 6.300 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 180 ;32.779 ;22.889 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 575 ;13.132 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 28 ;13.640 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 468 ; 0.095 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3997 ; 0.009 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 911 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4KZL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-JUN-13. REMARK 100 THE DEPOSITION ID IS D_1000079993. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-FEB-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.920 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL, SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36429 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 29.160 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 6.620 REMARK 200 R MERGE (I) : 0.13100 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 13.8200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.05 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.79 REMARK 200 R MERGE FOR SHELL (I) : 0.81100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.450 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 3U9H REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.67 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.44 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M LI2SO4, 0.1 M TRIS HCL 24 % REMARK 280 PEG3350, PH 8.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 59.44500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 59.44500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 45.72000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 49.13000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 45.72000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 49.13000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 59.44500 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 45.72000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 49.13000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 59.44500 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 45.72000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 49.13000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5930 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10590 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -33.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5970 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10680 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -31.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A1341 LIES ON A SPECIAL POSITION. REMARK 375 HOH B1333 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 923 REMARK 465 HIS A 924 REMARK 465 HIS A 925 REMARK 465 HIS A 926 REMARK 465 HIS A 927 REMARK 465 HIS A 928 REMARK 465 HIS A 929 REMARK 465 SER A 930 REMARK 465 SER A 931 REMARK 465 GLY A 932 REMARK 465 VAL A 933 REMARK 465 ASP A 934 REMARK 465 LEU A 935 REMARK 465 GLY A 936 REMARK 465 THR A 937 REMARK 465 GLU A 938 REMARK 465 ASN A 939 REMARK 465 LEU A 940 REMARK 465 TYR A 941 REMARK 465 PHE A 942 REMARK 465 GLN A 943 REMARK 465 SER A 944 REMARK 465 MET A 945 REMARK 465 LEU A 946 REMARK 465 ASN A 947 REMARK 465 THR A 948 REMARK 465 SER A 949 REMARK 465 GLY A 950 REMARK 465 SER A 951 REMARK 465 MET A 1113 REMARK 465 LYS C 1114 REMARK 465 GLY C 1162 REMARK 465 MET B 923 REMARK 465 HIS B 924 REMARK 465 HIS B 925 REMARK 465 HIS B 926 REMARK 465 HIS B 927 REMARK 465 HIS B 928 REMARK 465 HIS B 929 REMARK 465 SER B 930 REMARK 465 SER B 931 REMARK 465 GLY B 932 REMARK 465 VAL B 933 REMARK 465 ASP B 934 REMARK 465 LEU B 935 REMARK 465 GLY B 936 REMARK 465 THR B 937 REMARK 465 GLU B 938 REMARK 465 ASN B 939 REMARK 465 LEU B 940 REMARK 465 TYR B 941 REMARK 465 PHE B 942 REMARK 465 GLN B 943 REMARK 465 SER B 944 REMARK 465 MET B 945 REMARK 465 LEU B 946 REMARK 465 ASN B 947 REMARK 465 THR B 948 REMARK 465 SER B 949 REMARK 465 GLY B 950 REMARK 465 SER B 951 REMARK 465 LYS D 1114 REMARK 465 GLY D 1162 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A1020 54.77 -141.96 REMARK 500 VAL C1131 -61.20 -136.24 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1202 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A1081 SG REMARK 620 2 HIS A1084 ND1 105.2 REMARK 620 3 CYS A1089 SG 116.6 108.5 REMARK 620 4 CYS A1092 SG 116.4 95.6 111.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B1202 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B1081 SG REMARK 620 2 HIS B1084 ND1 108.1 REMARK 620 3 CYS B1089 SG 112.2 104.9 REMARK 620 4 CYS B1092 SG 117.5 101.5 111.3 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 20D A 1201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 1202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL C 1201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 20D B 1201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 1202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 1203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 1204 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4HKI RELATED DB: PDB REMARK 900 TANKYRASE 2 IN COMPLEX WITH FLAVONE REMARK 900 RELATED ID: 4KZQ RELATED DB: PDB REMARK 900 RELATED ID: 4KZU RELATED DB: PDB REMARK 900 RELATED ID: 4L09 RELATED DB: PDB REMARK 900 RELATED ID: 4L0B RELATED DB: PDB REMARK 900 RELATED ID: 4L0I RELATED DB: PDB REMARK 900 RELATED ID: 4L0S RELATED DB: PDB REMARK 900 RELATED ID: 4L0T RELATED DB: PDB REMARK 900 RELATED ID: 4L0V RELATED DB: PDB REMARK 900 RELATED ID: 4L10 RELATED DB: PDB REMARK 900 RELATED ID: 4L2F RELATED DB: PDB REMARK 900 RELATED ID: 4L2G RELATED DB: PDB REMARK 900 RELATED ID: 4L2K RELATED DB: PDB REMARK 900 RELATED ID: 4L31 RELATED DB: PDB REMARK 900 RELATED ID: 4L32 RELATED DB: PDB REMARK 900 RELATED ID: 4L33 RELATED DB: PDB REMARK 900 RELATED ID: 4L34 RELATED DB: PDB REMARK 900 RELATED ID: 4BS4 RELATED DB: PDB DBREF 4KZL A 946 1113 UNP Q9H2K2 TNKS2_HUMAN 946 1113 DBREF 4KZL C 1114 1162 UNP Q9H2K2 TNKS2_HUMAN 1114 1162 DBREF 4KZL B 946 1113 UNP Q9H2K2 TNKS2_HUMAN 946 1113 DBREF 4KZL D 1114 1162 UNP Q9H2K2 TNKS2_HUMAN 1114 1162 SEQADV 4KZL MET A 923 UNP Q9H2K2 EXPRESSION TAG SEQADV 4KZL HIS A 924 UNP Q9H2K2 EXPRESSION TAG SEQADV 4KZL HIS A 925 UNP Q9H2K2 EXPRESSION TAG SEQADV 4KZL HIS A 926 UNP Q9H2K2 EXPRESSION TAG SEQADV 4KZL HIS A 927 UNP Q9H2K2 EXPRESSION TAG SEQADV 4KZL HIS A 928 UNP Q9H2K2 EXPRESSION TAG SEQADV 4KZL HIS A 929 UNP Q9H2K2 EXPRESSION TAG SEQADV 4KZL SER A 930 UNP Q9H2K2 EXPRESSION TAG SEQADV 4KZL SER A 931 UNP Q9H2K2 EXPRESSION TAG SEQADV 4KZL GLY A 932 UNP Q9H2K2 EXPRESSION TAG SEQADV 4KZL VAL A 933 UNP Q9H2K2 EXPRESSION TAG SEQADV 4KZL ASP A 934 UNP Q9H2K2 EXPRESSION TAG SEQADV 4KZL LEU A 935 UNP Q9H2K2 EXPRESSION TAG SEQADV 4KZL GLY A 936 UNP Q9H2K2 EXPRESSION TAG SEQADV 4KZL THR A 937 UNP Q9H2K2 EXPRESSION TAG SEQADV 4KZL GLU A 938 UNP Q9H2K2 EXPRESSION TAG SEQADV 4KZL ASN A 939 UNP Q9H2K2 EXPRESSION TAG SEQADV 4KZL LEU A 940 UNP Q9H2K2 EXPRESSION TAG SEQADV 4KZL TYR A 941 UNP Q9H2K2 EXPRESSION TAG SEQADV 4KZL PHE A 942 UNP Q9H2K2 EXPRESSION TAG SEQADV 4KZL GLN A 943 UNP Q9H2K2 EXPRESSION TAG SEQADV 4KZL SER A 944 UNP Q9H2K2 EXPRESSION TAG SEQADV 4KZL MET A 945 UNP Q9H2K2 EXPRESSION TAG SEQADV 4KZL MET B 923 UNP Q9H2K2 EXPRESSION TAG SEQADV 4KZL HIS B 924 UNP Q9H2K2 EXPRESSION TAG SEQADV 4KZL HIS B 925 UNP Q9H2K2 EXPRESSION TAG SEQADV 4KZL HIS B 926 UNP Q9H2K2 EXPRESSION TAG SEQADV 4KZL HIS B 927 UNP Q9H2K2 EXPRESSION TAG SEQADV 4KZL HIS B 928 UNP Q9H2K2 EXPRESSION TAG SEQADV 4KZL HIS B 929 UNP Q9H2K2 EXPRESSION TAG SEQADV 4KZL SER B 930 UNP Q9H2K2 EXPRESSION TAG SEQADV 4KZL SER B 931 UNP Q9H2K2 EXPRESSION TAG SEQADV 4KZL GLY B 932 UNP Q9H2K2 EXPRESSION TAG SEQADV 4KZL VAL B 933 UNP Q9H2K2 EXPRESSION TAG SEQADV 4KZL ASP B 934 UNP Q9H2K2 EXPRESSION TAG SEQADV 4KZL LEU B 935 UNP Q9H2K2 EXPRESSION TAG SEQADV 4KZL GLY B 936 UNP Q9H2K2 EXPRESSION TAG SEQADV 4KZL THR B 937 UNP Q9H2K2 EXPRESSION TAG SEQADV 4KZL GLU B 938 UNP Q9H2K2 EXPRESSION TAG SEQADV 4KZL ASN B 939 UNP Q9H2K2 EXPRESSION TAG SEQADV 4KZL LEU B 940 UNP Q9H2K2 EXPRESSION TAG SEQADV 4KZL TYR B 941 UNP Q9H2K2 EXPRESSION TAG SEQADV 4KZL PHE B 942 UNP Q9H2K2 EXPRESSION TAG SEQADV 4KZL GLN B 943 UNP Q9H2K2 EXPRESSION TAG SEQADV 4KZL SER B 944 UNP Q9H2K2 EXPRESSION TAG SEQADV 4KZL MET B 945 UNP Q9H2K2 EXPRESSION TAG SEQRES 1 A 191 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 191 GLY THR GLU ASN LEU TYR PHE GLN SER MET LEU ASN THR SEQRES 3 A 191 SER GLY SER GLY THR ILE LEU ILE ASP LEU SER PRO ASP SEQRES 4 A 191 ASP LYS GLU PHE GLN SER VAL GLU GLU GLU MET GLN SER SEQRES 5 A 191 THR VAL ARG GLU HIS ARG ASP GLY GLY HIS ALA GLY GLY SEQRES 6 A 191 ILE PHE ASN ARG TYR ASN ILE LEU LYS ILE GLN LYS VAL SEQRES 7 A 191 CYS ASN LYS LYS LEU TRP GLU ARG TYR THR HIS ARG ARG SEQRES 8 A 191 LYS GLU VAL SER GLU GLU ASN HIS ASN HIS ALA ASN GLU SEQRES 9 A 191 ARG MET LEU PHE HIS GLY SER PRO PHE VAL ASN ALA ILE SEQRES 10 A 191 ILE HIS LYS GLY PHE ASP GLU ARG HIS ALA TYR ILE GLY SEQRES 11 A 191 GLY MET PHE GLY ALA GLY ILE TYR PHE ALA GLU ASN SER SEQRES 12 A 191 SER LYS SER ASN GLN TYR VAL TYR GLY ILE GLY GLY GLY SEQRES 13 A 191 THR GLY CYS PRO VAL HIS LYS ASP ARG SER CYS TYR ILE SEQRES 14 A 191 CYS HIS ARG GLN LEU LEU PHE CYS ARG VAL THR LEU GLY SEQRES 15 A 191 LYS SER PHE LEU GLN PHE SER ALA MET SEQRES 1 C 49 LYS MET ALA HIS SER PRO PRO GLY HIS HIS SER VAL THR SEQRES 2 C 49 GLY ARG PRO SER VAL ASN GLY LEU ALA LEU ALA GLU TYR SEQRES 3 C 49 VAL ILE TYR ARG GLY GLU GLN ALA TYR PRO GLU TYR LEU SEQRES 4 C 49 ILE THR TYR GLN ILE MET ARG PRO GLU GLY SEQRES 1 B 191 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 B 191 GLY THR GLU ASN LEU TYR PHE GLN SER MET LEU ASN THR SEQRES 3 B 191 SER GLY SER GLY THR ILE LEU ILE ASP LEU SER PRO ASP SEQRES 4 B 191 ASP LYS GLU PHE GLN SER VAL GLU GLU GLU MET GLN SER SEQRES 5 B 191 THR VAL ARG GLU HIS ARG ASP GLY GLY HIS ALA GLY GLY SEQRES 6 B 191 ILE PHE ASN ARG TYR ASN ILE LEU LYS ILE GLN LYS VAL SEQRES 7 B 191 CYS ASN LYS LYS LEU TRP GLU ARG TYR THR HIS ARG ARG SEQRES 8 B 191 LYS GLU VAL SER GLU GLU ASN HIS ASN HIS ALA ASN GLU SEQRES 9 B 191 ARG MET LEU PHE HIS GLY SER PRO PHE VAL ASN ALA ILE SEQRES 10 B 191 ILE HIS LYS GLY PHE ASP GLU ARG HIS ALA TYR ILE GLY SEQRES 11 B 191 GLY MET PHE GLY ALA GLY ILE TYR PHE ALA GLU ASN SER SEQRES 12 B 191 SER LYS SER ASN GLN TYR VAL TYR GLY ILE GLY GLY GLY SEQRES 13 B 191 THR GLY CYS PRO VAL HIS LYS ASP ARG SER CYS TYR ILE SEQRES 14 B 191 CYS HIS ARG GLN LEU LEU PHE CYS ARG VAL THR LEU GLY SEQRES 15 B 191 LYS SER PHE LEU GLN PHE SER ALA MET SEQRES 1 D 49 LYS MET ALA HIS SER PRO PRO GLY HIS HIS SER VAL THR SEQRES 2 D 49 GLY ARG PRO SER VAL ASN GLY LEU ALA LEU ALA GLU TYR SEQRES 3 D 49 VAL ILE TYR ARG GLY GLU GLN ALA TYR PRO GLU TYR LEU SEQRES 4 D 49 ILE THR TYR GLN ILE MET ARG PRO GLU GLY HET 20D A1201 18 HET ZN A1202 1 HET SO4 A1203 5 HET SO4 A1204 5 HET GOL C1201 6 HET 20D B1201 18 HET ZN B1202 1 HET SO4 B1203 5 HET SO4 B1204 5 HETNAM 20D 2-(4-FLUOROPHENYL)-4H-CHROMEN-4-ONE HETNAM ZN ZINC ION HETNAM SO4 SULFATE ION HETNAM GOL GLYCEROL HETSYN 20D 4'-FLUOROFLAVONE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 5 20D 2(C15 H9 F O2) FORMUL 6 ZN 2(ZN 2+) FORMUL 7 SO4 4(O4 S 2-) FORMUL 9 GOL C3 H8 O3 FORMUL 14 HOH *264(H2 O) HELIX 1 1 ASP A 962 THR A 975 1 14 HELIX 2 2 ASN A 1002 GLU A 1019 1 18 HELIX 3 3 PHE A 1035 GLY A 1043 1 9 HELIX 4 4 ASP A 1045 ALA A 1049 5 5 HELIX 5 5 ASN A 1064 GLN A 1070 1 7 HELIX 6 6 GLY A 1074 GLY A 1078 5 5 HELIX 7 7 ARG C 1143 GLU C 1145 5 3 HELIX 8 8 ASP B 962 THR B 975 1 14 HELIX 9 9 ASN B 1002 ASN B 1020 1 19 HELIX 10 10 PHE B 1035 GLY B 1043 1 9 HELIX 11 11 ASP B 1045 ALA B 1049 5 5 HELIX 12 12 ASN B 1064 GLN B 1070 1 7 HELIX 13 13 GLY B 1074 GLY B 1078 5 5 HELIX 14 14 ARG D 1143 GLU D 1145 5 3 SHEET 1 A 5 ILE A 954 ASP A 957 0 SHEET 2 A 5 TYR A 992 CYS A1001 -1 O LYS A 999 N ILE A 956 SHEET 3 A 5 ALA C1147 ILE C1157 -1 O LEU C1152 N GLN A 998 SHEET 4 A 5 ARG A1094 THR A1102 -1 N ARG A1094 O TYR C1155 SHEET 5 A 5 GLU A1026 HIS A1031 -1 N LEU A1029 O CYS A1099 SHEET 1 B 4 ILE A1059 ALA A1062 0 SHEET 2 B 4 GLU C1138 ILE C1141 -1 O TYR C1139 N PHE A1061 SHEET 3 B 4 SER C1124 PRO C1129 -1 N GLY C1127 O GLU C1138 SHEET 4 B 4 SER A1106 SER A1111 1 N PHE A1107 O THR C1126 SHEET 1 C 5 ILE B 954 ASP B 957 0 SHEET 2 C 5 TYR B 992 CYS B1001 -1 O CYS B1001 N ILE B 954 SHEET 3 C 5 ALA D1147 ILE D1157 -1 O LEU D1152 N GLN B 998 SHEET 4 C 5 ARG B1094 THR B1102 -1 N ARG B1094 O TYR D1155 SHEET 5 C 5 GLU B1026 HIS B1031 -1 N LEU B1029 O CYS B1099 SHEET 1 D 4 ILE B1059 ALA B1062 0 SHEET 2 D 4 GLU D1138 ILE D1141 -1 O ILE D1141 N ILE B1059 SHEET 3 D 4 SER D1124 PRO D1129 -1 N GLY D1127 O GLU D1138 SHEET 4 D 4 SER B1106 SER B1111 1 N GLN B1109 O THR D1126 LINK SG CYS A1081 ZN ZN A1202 1555 1555 2.25 LINK ND1 HIS A1084 ZN ZN A1202 1555 1555 2.32 LINK SG CYS A1089 ZN ZN A1202 1555 1555 2.30 LINK SG CYS A1092 ZN ZN A1202 1555 1555 2.36 LINK SG CYS B1081 ZN ZN B1202 1555 1555 2.30 LINK ND1 HIS B1084 ZN ZN B1202 1555 1555 2.11 LINK SG CYS B1089 ZN ZN B1202 1555 1555 2.24 LINK SG CYS B1092 ZN ZN B1202 1555 1555 2.31 SITE 1 AC1 8 HIS A1031 GLY A1032 TYR A1050 TYR A1060 SITE 2 AC1 8 LYS A1067 SER A1068 TYR A1071 GLU C1138 SITE 1 AC2 4 CYS A1081 HIS A1084 CYS A1089 CYS A1092 SITE 1 AC3 7 ARG A 977 HIS A 979 ARG A 980 LYS A1067 SITE 2 AC3 7 GLN A1070 HOH A1408 HOH C1316 SITE 1 AC4 5 ASN A 990 ARG A 991 HOH A1355 PRO C1160 SITE 2 AC4 5 GLU C1161 SITE 1 AC5 5 PRO C1129 SER C1130 VAL C1131 ASN C1132 SITE 2 AC5 5 GLY C1133 SITE 1 AC6 8 HIS B1031 GLY B1032 TYR B1050 TYR B1060 SITE 2 AC6 8 LYS B1067 SER B1068 TYR B1071 GLU D1138 SITE 1 AC7 4 CYS B1081 HIS B1084 CYS B1089 CYS B1092 SITE 1 AC8 7 ARG B 977 HIS B 979 ARG B 980 LYS B1067 SITE 2 AC8 7 GLN B1070 HOH B1388 HOH D1210 SITE 1 AC9 5 ASN B 990 ARG B 991 PRO D1160 GLU D1161 SITE 2 AC9 5 HOH D1208 CRYST1 91.440 98.260 118.890 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010936 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010177 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008411 0.00000