PDB Short entry for 4LVM HEADER DNA BINDING PROTEIN/DNA 26-JUL-13 4LVM TITLE MOBM RELAXASE DOMAIN (MOBV; MOB_PRE) BOUND TO PLASMID PMV158 ORIT DNA TITLE 2 (23NT). MN-BOUND CRYSTAL STRUCTURE AT PH 6.5 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PLASMID RECOMBINATION ENZYME; COMPND 3 CHAIN: A, C; COMPND 4 FRAGMENT: RELAXASE DOMAIN OF MOBM PROTEIN, UNP RESIDUES 2-199; COMPND 5 SYNONYM: MOBILIZATION PROTEIN; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: ACTTTAT OLIGONUCLEOTIDE; COMPND 9 CHAIN: B, D; COMPND 10 FRAGMENT: OLIGONUCLEOTIDE_1 MIMICKING PMV158 ORIT DNA HAIRPIN; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: ATAAAGTATAGTGTGT OLIGONUCLEOTIDE; COMPND 14 CHAIN: E, F; COMPND 15 FRAGMENT: OLIGONUCLEOTIDE_2 MIMICKING PMV158 ORIT DNA HAIRPIN; COMPND 16 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS AGALACTIAE; SOURCE 3 ORGANISM_TAXID: 1311; SOURCE 4 GENE: PRE, MOB; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PALSMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PQE-1; SOURCE 10 MOL_ID: 2; SOURCE 11 SYNTHETIC: YES; SOURCE 12 OTHER_DETAILS: OLIGONUCLEOTIDES WERE OBTAINED FROM BIOMERS (ULM, SOURCE 13 GERMANY).; SOURCE 14 MOL_ID: 3; SOURCE 15 SYNTHETIC: YES; SOURCE 16 OTHER_DETAILS: OLIGONUCLEOTIDES WERE OBTAINED FROM BIOMERS (ULM, SOURCE 17 GERMANY). KEYWDS PROTEIN-DNA COMPLEX, PFAM FAMILY: MOB_PRE (PF01076). MOB RELAXASE KEYWDS 2 FAMILY: MOBV, RELAXASE/ENDONUCLEASE, ORIT DNA, DNA BINDING PROTEIN- KEYWDS 3 DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR R.PLUTA,D.R.BOER,M.COLL REVDAT 3 28-FEB-24 4LVM 1 REMARK LINK REVDAT 2 18-OCT-17 4LVM 1 JRNL REVDAT 1 24-SEP-14 4LVM 0 JRNL AUTH R.PLUTA,D.R.BOER,F.LORENZO-DIAZ,S.RUSSI,H.GOMEZ, JRNL AUTH 2 C.FERNANDEZ-LOPEZ,R.PEREZ-LUQUE,M.OROZCO,M.ESPINOSA,M.COLL JRNL TITL STRUCTURAL BASIS OF A HISTIDINE-DNA NICKING/JOINING JRNL TITL 2 MECHANISM FOR GENE TRANSFER AND PROMISCUOUS SPREAD OF JRNL TITL 3 ANTIBIOTIC RESISTANCE. JRNL REF PROC. NATL. ACAD. SCI. V. 114 E6526 2017 JRNL REF 2 U.S.A. JRNL REFN ESSN 1091-6490 JRNL PMID 28739894 JRNL DOI 10.1073/PNAS.1702971114 REMARK 2 REMARK 2 RESOLUTION. 3.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0102 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.40 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 3 NUMBER OF REFLECTIONS : 13500 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.257 REMARK 3 R VALUE (WORKING SET) : 0.255 REMARK 3 FREE R VALUE : 0.294 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 732 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.18 REMARK 3 REFLECTION IN BIN (WORKING SET) : 974 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.79 REMARK 3 BIN R VALUE (WORKING SET) : 0.4300 REMARK 3 BIN FREE R VALUE SET COUNT : 46 REMARK 3 BIN FREE R VALUE : 0.5330 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3144 REMARK 3 NUCLEIC ACID ATOMS : 864 REMARK 3 HETEROGEN ATOMS : 9 REMARK 3 SOLVENT ATOMS : 14 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 76.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 87.63 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -12.83000 REMARK 3 B22 (A**2) : -5.32000 REMARK 3 B33 (A**2) : 18.15000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.509 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.508 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 55.145 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.913 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.894 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4179 ; 0.008 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5786 ; 1.409 ; 2.210 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 380 ; 5.848 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 180 ;38.021 ;24.333 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 601 ;17.079 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 23 ;17.202 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 604 ; 0.089 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2920 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1905 ; 0.444 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3056 ; 0.868 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2274 ; 0.961 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2730 ; 1.630 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 14 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 26 REMARK 3 ORIGIN FOR THE GROUP (A): 40.2501 20.1011 37.7115 REMARK 3 T TENSOR REMARK 3 T11: 0.4671 T22: 0.5985 REMARK 3 T33: 0.4698 T12: 0.0103 REMARK 3 T13: -0.0314 T23: 0.0102 REMARK 3 L TENSOR REMARK 3 L11: 1.0402 L22: -0.8520 REMARK 3 L33: 2.4486 L12: 0.7683 REMARK 3 L13: -0.1896 L23: -0.3941 REMARK 3 S TENSOR REMARK 3 S11: -0.0051 S12: -0.2709 S13: -0.3427 REMARK 3 S21: 0.4903 S22: 0.0411 S23: -0.3971 REMARK 3 S31: 0.1721 S32: 0.0846 S33: -0.0360 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 33 A 65 REMARK 3 ORIGIN FOR THE GROUP (A): 35.6121 18.1727 47.3371 REMARK 3 T TENSOR REMARK 3 T11: 0.6772 T22: 0.7790 REMARK 3 T33: 0.4269 T12: -0.0333 REMARK 3 T13: -0.0042 T23: 0.0328 REMARK 3 L TENSOR REMARK 3 L11: -4.4771 L22: 1.0663 REMARK 3 L33: 0.3987 L12: -0.7495 REMARK 3 L13: -0.2726 L23: 0.1800 REMARK 3 S TENSOR REMARK 3 S11: -0.0646 S12: -0.5184 S13: -0.0917 REMARK 3 S21: 0.2946 S22: -0.0159 S23: -0.0233 REMARK 3 S31: -0.0416 S32: 0.0311 S33: 0.0805 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 66 A 90 REMARK 3 ORIGIN FOR THE GROUP (A): 31.0193 19.1890 33.7666 REMARK 3 T TENSOR REMARK 3 T11: 0.4483 T22: 0.5549 REMARK 3 T33: 0.3594 T12: -0.0001 REMARK 3 T13: 0.0730 T23: -0.0099 REMARK 3 L TENSOR REMARK 3 L11: -1.0152 L22: 0.9454 REMARK 3 L33: 1.2322 L12: -0.9899 REMARK 3 L13: -0.0414 L23: -0.4325 REMARK 3 S TENSOR REMARK 3 S11: 0.0996 S12: -0.3403 S13: -0.3116 REMARK 3 S21: 0.1052 S22: 0.0455 S23: -0.0364 REMARK 3 S31: 0.0702 S32: -0.2085 S33: -0.1451 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 91 A 150 REMARK 3 ORIGIN FOR THE GROUP (A): 34.2898 29.1704 41.3691 REMARK 3 T TENSOR REMARK 3 T11: 0.4804 T22: 0.5960 REMARK 3 T33: 0.4049 T12: 0.0061 REMARK 3 T13: 0.0005 T23: -0.0594 REMARK 3 L TENSOR REMARK 3 L11: 0.0503 L22: 0.5348 REMARK 3 L33: 0.9997 L12: 0.4465 REMARK 3 L13: 0.5755 L23: 0.1861 REMARK 3 S TENSOR REMARK 3 S11: 0.0219 S12: -0.2892 S13: 0.0999 REMARK 3 S21: 0.2645 S22: -0.0685 S23: -0.0687 REMARK 3 S31: -0.0561 S32: -0.0125 S33: 0.0466 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 151 A 199 REMARK 3 ORIGIN FOR THE GROUP (A): 40.9645 33.5615 29.6552 REMARK 3 T TENSOR REMARK 3 T11: 0.4633 T22: 0.4559 REMARK 3 T33: 0.4133 T12: -0.0478 REMARK 3 T13: 0.0100 T23: -0.0513 REMARK 3 L TENSOR REMARK 3 L11: 1.5375 L22: 0.7079 REMARK 3 L33: 1.6266 L12: 0.1906 REMARK 3 L13: 0.1736 L23: 0.1547 REMARK 3 S TENSOR REMARK 3 S11: -0.0648 S12: -0.1790 S13: 0.4201 REMARK 3 S21: 0.0337 S22: 0.0357 S23: 0.0094 REMARK 3 S31: -0.2711 S32: 0.0615 S33: 0.0291 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : E 12 E 18 REMARK 3 ORIGIN FOR THE GROUP (A): 23.0473 11.3018 19.0333 REMARK 3 T TENSOR REMARK 3 T11: 0.3988 T22: 0.3778 REMARK 3 T33: 0.4516 T12: -0.1257 REMARK 3 T13: -0.0160 T23: -0.0178 REMARK 3 L TENSOR REMARK 3 L11: 0.0617 L22: 2.6234 REMARK 3 L33: 1.7177 L12: 0.9205 REMARK 3 L13: 0.3895 L23: 1.5728 REMARK 3 S TENSOR REMARK 3 S11: -0.2345 S12: -0.4228 S13: -0.2394 REMARK 3 S21: -0.2946 S22: -0.0261 S23: 0.3340 REMARK 3 S31: -0.0146 S32: -0.4154 S33: 0.2607 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : E 19 E 23 REMARK 3 ORIGIN FOR THE GROUP (A): 39.2961 27.9736 24.5237 REMARK 3 T TENSOR REMARK 3 T11: 0.4539 T22: 0.5424 REMARK 3 T33: 0.4252 T12: -0.1032 REMARK 3 T13: -0.1255 T23: -0.1447 REMARK 3 L TENSOR REMARK 3 L11: 1.9302 L22: 2.5551 REMARK 3 L33: 2.3719 L12: 6.7081 REMARK 3 L13: -1.3742 L23: 1.3634 REMARK 3 S TENSOR REMARK 3 S11: 0.5195 S12: -0.4801 S13: 0.4788 REMARK 3 S21: -0.4294 S22: -0.4645 S23: -0.5322 REMARK 3 S31: -0.0539 S32: 0.1482 S33: -0.0551 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : E 24 E 27 REMARK 3 ORIGIN FOR THE GROUP (A): 50.0556 28.2611 35.4870 REMARK 3 T TENSOR REMARK 3 T11: 0.3671 T22: 0.9188 REMARK 3 T33: 0.5178 T12: 0.0044 REMARK 3 T13: 0.0514 T23: 0.0461 REMARK 3 L TENSOR REMARK 3 L11: -6.4722 L22: 33.6973 REMARK 3 L33: -7.2589 L12: 6.5876 REMARK 3 L13: 7.1416 L23: 1.8802 REMARK 3 S TENSOR REMARK 3 S11: 0.7618 S12: -0.6018 S13: -0.0839 REMARK 3 S21: 2.1456 S22: -0.4980 S23: 1.5918 REMARK 3 S31: -0.6878 S32: 0.9906 S33: -0.2637 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 2 C 101 REMARK 3 ORIGIN FOR THE GROUP (A): 34.0547 37.2404 2.4140 REMARK 3 T TENSOR REMARK 3 T11: 0.1740 T22: 0.1939 REMARK 3 T33: 0.0562 T12: -0.0252 REMARK 3 T13: -0.0058 T23: -0.0072 REMARK 3 L TENSOR REMARK 3 L11: 0.9940 L22: 1.1792 REMARK 3 L33: 1.0138 L12: -0.3936 REMARK 3 L13: 0.1836 L23: -0.3530 REMARK 3 S TENSOR REMARK 3 S11: -0.0061 S12: 0.0330 S13: 0.0675 REMARK 3 S21: -0.0111 S22: -0.0039 S23: 0.0267 REMARK 3 S31: -0.0021 S32: -0.0164 S33: 0.0100 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 102 C 170 REMARK 3 ORIGIN FOR THE GROUP (A): 41.0206 38.2994 -6.7685 REMARK 3 T TENSOR REMARK 3 T11: 0.2375 T22: 0.2458 REMARK 3 T33: 0.0716 T12: -0.0025 REMARK 3 T13: 0.0268 T23: 0.0394 REMARK 3 L TENSOR REMARK 3 L11: 0.5153 L22: 0.6434 REMARK 3 L33: 0.2689 L12: -0.2143 REMARK 3 L13: -0.1337 L23: -0.1333 REMARK 3 S TENSOR REMARK 3 S11: -0.0060 S12: 0.1684 S13: 0.1754 REMARK 3 S21: -0.1512 S22: -0.0246 S23: -0.2102 REMARK 3 S31: 0.0139 S32: 0.0439 S33: 0.0305 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 171 C 192 REMARK 3 ORIGIN FOR THE GROUP (A): 35.6414 25.3366 -12.2942 REMARK 3 T TENSOR REMARK 3 T11: 0.3896 T22: 0.3861 REMARK 3 T33: 0.3544 T12: 0.0077 REMARK 3 T13: -0.0311 T23: 0.0444 REMARK 3 L TENSOR REMARK 3 L11: 1.4651 L22: 0.9171 REMARK 3 L33: 1.8307 L12: 1.0387 REMARK 3 L13: 0.0510 L23: 1.1903 REMARK 3 S TENSOR REMARK 3 S11: 0.0012 S12: 0.2081 S13: -0.4974 REMARK 3 S21: -0.0220 S22: -0.0210 S23: 0.2110 REMARK 3 S31: 0.1243 S32: -0.2838 S33: 0.0198 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : F 12 F 16 REMARK 3 ORIGIN FOR THE GROUP (A): 24.3753 59.5212 -17.9090 REMARK 3 T TENSOR REMARK 3 T11: 0.4183 T22: 0.3558 REMARK 3 T33: 0.4485 T12: 0.1283 REMARK 3 T13: 0.0281 T23: 0.0733 REMARK 3 L TENSOR REMARK 3 L11: 11.3348 L22: 5.2809 REMARK 3 L33: 2.1876 L12: -1.1849 REMARK 3 L13: 4.5668 L23: -2.4243 REMARK 3 S TENSOR REMARK 3 S11: -0.0058 S12: 0.4747 S13: 0.3952 REMARK 3 S21: -0.3001 S22: -0.1905 S23: -0.0678 REMARK 3 S31: -0.3808 S32: 0.1676 S33: 0.1963 REMARK 3 REMARK 3 TLS GROUP : 13 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : F 17 F 20 REMARK 3 ORIGIN FOR THE GROUP (A): 26.2350 42.9927 -16.0211 REMARK 3 T TENSOR REMARK 3 T11: 0.3112 T22: 0.3995 REMARK 3 T33: 0.2793 T12: 0.0341 REMARK 3 T13: -0.0059 T23: 0.0044 REMARK 3 L TENSOR REMARK 3 L11: 1.5635 L22: 8.4176 REMARK 3 L33: 1.4742 L12: 1.5110 REMARK 3 L13: 0.9259 L23: 1.9537 REMARK 3 S TENSOR REMARK 3 S11: 0.1178 S12: 0.3424 S13: 0.1036 REMARK 3 S21: -0.1071 S22: -0.0728 S23: -0.3392 REMARK 3 S31: 0.2562 S32: 0.2376 S33: -0.0449 REMARK 3 REMARK 3 TLS GROUP : 14 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : F 21 F 25 REMARK 3 ORIGIN FOR THE GROUP (A): 33.6057 27.2906 -12.9239 REMARK 3 T TENSOR REMARK 3 T11: 0.3371 T22: 0.3365 REMARK 3 T33: 0.2327 T12: -0.0388 REMARK 3 T13: -0.0244 T23: -0.0133 REMARK 3 L TENSOR REMARK 3 L11: 2.3584 L22: 0.0633 REMARK 3 L33: 3.5127 L12: -2.7086 REMARK 3 L13: 1.7185 L23: 0.9771 REMARK 3 S TENSOR REMARK 3 S11: 0.2335 S12: -0.1752 S13: 0.4467 REMARK 3 S21: -0.0812 S22: -0.0016 S23: 0.2402 REMARK 3 S31: 0.2049 S32: -0.0488 S33: -0.2319 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4LVM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-SEP-13. REMARK 100 THE DEPOSITION ID IS D_1000081141. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-FEB-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97243 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13500 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.100 REMARK 200 RESOLUTION RANGE LOW (A) : 28.400 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : 4.100 REMARK 200 R MERGE (I) : 0.09200 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 9.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.15 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.17 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 8000, 02.M MGAC(4H20), 0.1M REMARK 280 MES PH 6.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 33.67000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 65.06000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 33.67000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 65.06000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5310 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12860 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -53.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4810 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12700 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -69.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PHE A 27 REMARK 465 GLU A 28 REMARK 465 THR A 29 REMARK 465 HIS A 30 REMARK 465 SER A 31 REMARK 465 ASN A 32 REMARK 465 LYS C 193 REMARK 465 ARG C 194 REMARK 465 ALA C 195 REMARK 465 MET C 196 REMARK 465 ALA C 197 REMARK 465 ASP C 198 REMARK 465 MET C 199 REMARK 465 DG F 26 REMARK 465 DT F 27 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 DT E 27 C5' C4' O4' C3' O3' C2' C1' REMARK 470 DT E 27 N1 C2 O2 N3 C4 O4 C5 REMARK 470 DT E 27 C7 C6 REMARK 470 DT F 25 C5' C4' O4' C3' O3' C2' C1' REMARK 470 DT F 25 N1 C2 O2 N3 C4 O4 C5 REMARK 470 DT F 25 C7 C6 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DA E 19 O3' DA E 19 C3' -0.042 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DA B 1 O4' - C1' - N9 ANGL. DEV. = 3.9 DEGREES REMARK 500 DC B 2 C3' - C2' - C1' ANGL. DEV. = -8.0 DEGREES REMARK 500 DC B 2 O4' - C1' - N1 ANGL. DEV. = 4.4 DEGREES REMARK 500 DT B 3 C3' - C2' - C1' ANGL. DEV. = -6.0 DEGREES REMARK 500 DT B 3 O4' - C1' - N1 ANGL. DEV. = 3.9 DEGREES REMARK 500 DT B 4 O4' - C1' - N1 ANGL. DEV. = 2.6 DEGREES REMARK 500 DA E 14 O4' - C1' - N9 ANGL. DEV. = 1.9 DEGREES REMARK 500 DA E 16 O4' - C1' - N9 ANGL. DEV. = 4.1 DEGREES REMARK 500 DT E 18 O4' - C4' - C3' ANGL. DEV. = -3.3 DEGREES REMARK 500 DG E 24 C3' - C2' - C1' ANGL. DEV. = -6.0 DEGREES REMARK 500 DG E 24 O4' - C1' - N9 ANGL. DEV. = 1.9 DEGREES REMARK 500 DT E 25 O4' - C1' - N1 ANGL. DEV. = 2.8 DEGREES REMARK 500 DG E 26 O4' - C1' - N9 ANGL. DEV. = 2.3 DEGREES REMARK 500 DC D 2 C1' - O4' - C4' ANGL. DEV. = -6.7 DEGREES REMARK 500 DC D 2 O4' - C1' - N1 ANGL. DEV. = 6.6 DEGREES REMARK 500 DA F 12 O4' - C1' - N9 ANGL. DEV. = 4.2 DEGREES REMARK 500 DT F 13 C3' - O3' - P ANGL. DEV. = 10.9 DEGREES REMARK 500 DA F 14 O4' - C1' - N9 ANGL. DEV. = 2.1 DEGREES REMARK 500 DA F 16 O4' - C1' - N9 ANGL. DEV. = 3.1 DEGREES REMARK 500 DG F 22 O4' - C1' - N9 ANGL. DEV. = 3.0 DEGREES REMARK 500 DT F 23 O5' - C5' - C4' ANGL. DEV. = -7.6 DEGREES REMARK 500 DT F 23 C3' - O3' - P ANGL. DEV. = 8.8 DEGREES REMARK 500 DG F 24 C3' - O3' - P ANGL. DEV. = 13.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 42 -31.46 70.39 REMARK 500 ASP A 48 47.68 -96.20 REMARK 500 GLU A 82 95.25 -68.56 REMARK 500 SER A 87 -167.20 -161.76 REMARK 500 LYS A 94 22.01 -77.50 REMARK 500 ALA A 123 73.12 -156.23 REMARK 500 PHE A 152 72.69 -104.08 REMARK 500 ARG C 25 50.10 72.01 REMARK 500 ASP C 34 55.34 -91.37 REMARK 500 ASN C 66 -13.27 -143.06 REMARK 500 SER C 87 -146.56 -140.75 REMARK 500 GLU C 93 0.76 -68.77 REMARK 500 ASP C 96 -166.72 -79.88 REMARK 500 ASP C 128 -4.14 -57.05 REMARK 500 ARG C 154 -56.21 -29.94 REMARK 500 GLU C 191 94.99 -66.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 201 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 22 NE2 REMARK 620 2 HIS A 126 ND1 88.9 REMARK 620 3 GLU A 129 OE2 104.9 112.7 REMARK 620 4 HIS A 133 NE2 167.4 102.6 75.8 REMARK 620 5 HIS A 135 NE2 101.5 92.8 143.2 73.0 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN C 201 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS C 22 NE2 REMARK 620 2 GLU C 129 OE2 79.4 REMARK 620 3 HIS C 133 NE2 157.2 84.0 REMARK 620 4 HIS C 135 NE2 107.0 142.0 77.2 REMARK 620 5 HOH C 308 O 87.6 105.5 112.0 112.1 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN C 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL C 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL C 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL C 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL F 101 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4LVI RELATED DB: PDB REMARK 900 RELATED ID: 4LVJ RELATED DB: PDB REMARK 900 RELATED ID: 4LVK RELATED DB: PDB REMARK 900 RELATED ID: 4LVL RELATED DB: PDB DBREF 4LVM A 2 199 UNP P13925 PRE_STRAG 2 199 DBREF 4LVM C 2 199 UNP P13925 PRE_STRAG 2 199 DBREF 4LVM B 1 7 PDB 4LVM 4LVM 1 7 DBREF 4LVM D 1 7 PDB 4LVM 4LVM 1 7 DBREF 4LVM E 12 27 PDB 4LVM 4LVM 12 27 DBREF 4LVM F 12 27 PDB 4LVM 4LVM 12 27 SEQRES 1 A 198 SER TYR MET VAL ALA ARG MET GLN LYS MET LYS ALA GLY SEQRES 2 A 198 ASN LEU GLY GLY ALA PHE LYS HIS ASN GLU ARG VAL PHE SEQRES 3 A 198 GLU THR HIS SER ASN LYS ASP ILE ASN PRO SER ARG SER SEQRES 4 A 198 HIS LEU ASN TYR GLU LEU THR ASP ARG ASP ARG SER VAL SEQRES 5 A 198 SER TYR GLU LYS GLN ILE LYS ASP TYR VAL ASN GLU ASN SEQRES 6 A 198 LYS VAL SER ASN ARG ALA ILE ARG LYS ASP ALA VAL LEU SEQRES 7 A 198 CYS ASP GLU TRP ILE ILE THR SER ASP LYS ASP PHE PHE SEQRES 8 A 198 GLU LYS LEU ASP GLU GLU GLN THR ARG THR PHE PHE GLU SEQRES 9 A 198 THR ALA LYS ASN TYR PHE ALA GLU ASN TYR GLY GLU SER SEQRES 10 A 198 ASN ILE ALA TYR ALA SER VAL HIS LEU ASP GLU SER THR SEQRES 11 A 198 PRO HIS MET HIS MET GLY VAL VAL PRO PHE GLU ASN GLY SEQRES 12 A 198 LYS LEU SER SER LYS ALA MET PHE ASP ARG GLU GLU LEU SEQRES 13 A 198 LYS HIS ILE GLN GLU ASP LEU PRO ARG TYR MET SER ASP SEQRES 14 A 198 HIS GLY PHE GLU LEU GLU ARG GLY LYS LEU ASN SER GLU SEQRES 15 A 198 ALA LYS HIS LYS THR VAL ALA GLU PHE LYS ARG ALA MET SEQRES 16 A 198 ALA ASP MET SEQRES 1 B 7 DA DC DT DT DT DA DT SEQRES 1 E 16 DA DT DA DA DA DG DT DA DT DA DG DT DG SEQRES 2 E 16 DT DG DT SEQRES 1 C 198 SER TYR MET VAL ALA ARG MET GLN LYS MET LYS ALA GLY SEQRES 2 C 198 ASN LEU GLY GLY ALA PHE LYS HIS ASN GLU ARG VAL PHE SEQRES 3 C 198 GLU THR HIS SER ASN LYS ASP ILE ASN PRO SER ARG SER SEQRES 4 C 198 HIS LEU ASN TYR GLU LEU THR ASP ARG ASP ARG SER VAL SEQRES 5 C 198 SER TYR GLU LYS GLN ILE LYS ASP TYR VAL ASN GLU ASN SEQRES 6 C 198 LYS VAL SER ASN ARG ALA ILE ARG LYS ASP ALA VAL LEU SEQRES 7 C 198 CYS ASP GLU TRP ILE ILE THR SER ASP LYS ASP PHE PHE SEQRES 8 C 198 GLU LYS LEU ASP GLU GLU GLN THR ARG THR PHE PHE GLU SEQRES 9 C 198 THR ALA LYS ASN TYR PHE ALA GLU ASN TYR GLY GLU SER SEQRES 10 C 198 ASN ILE ALA TYR ALA SER VAL HIS LEU ASP GLU SER THR SEQRES 11 C 198 PRO HIS MET HIS MET GLY VAL VAL PRO PHE GLU ASN GLY SEQRES 12 C 198 LYS LEU SER SER LYS ALA MET PHE ASP ARG GLU GLU LEU SEQRES 13 C 198 LYS HIS ILE GLN GLU ASP LEU PRO ARG TYR MET SER ASP SEQRES 14 C 198 HIS GLY PHE GLU LEU GLU ARG GLY LYS LEU ASN SER GLU SEQRES 15 C 198 ALA LYS HIS LYS THR VAL ALA GLU PHE LYS ARG ALA MET SEQRES 16 C 198 ALA ASP MET SEQRES 1 D 7 DA DC DT DT DT DA DT SEQRES 1 F 16 DA DT DA DA DA DG DT DA DT DA DG DT DG SEQRES 2 F 16 DT DG DT HET MN A 201 1 HET MG A 202 1 HET CL A 203 1 HET NA A 204 1 HET MN C 201 1 HET CL C 202 1 HET CL C 203 1 HET CL C 204 1 HET CL F 101 1 HETNAM MN MANGANESE (II) ION HETNAM MG MAGNESIUM ION HETNAM CL CHLORIDE ION HETNAM NA SODIUM ION FORMUL 7 MN 2(MN 2+) FORMUL 8 MG MG 2+ FORMUL 9 CL 5(CL 1-) FORMUL 10 NA NA 1+ FORMUL 16 HOH *14(H2 O) HELIX 1 1 LYS A 12 GLU A 24 1 13 HELIX 2 2 SER A 54 LYS A 67 1 14 HELIX 3 3 ASP A 88 LYS A 94 1 7 HELIX 4 4 ASP A 96 GLY A 116 1 21 HELIX 5 5 SER A 147 PHE A 152 1 6 HELIX 6 6 ASP A 153 SER A 169 1 17 HELIX 7 7 ASP A 170 GLY A 172 5 3 HELIX 8 8 THR A 188 ALA A 195 1 8 HELIX 9 9 GLY C 14 GLU C 24 1 11 HELIX 10 10 ASN C 36 HIS C 41 1 6 HELIX 11 11 SER C 54 GLU C 65 1 12 HELIX 12 12 ASP C 88 GLU C 93 1 6 HELIX 13 13 ASP C 96 GLY C 116 1 21 HELIX 14 14 SER C 147 PHE C 152 1 6 HELIX 15 15 ASP C 153 SER C 169 1 17 SHEET 1 A 4 MET A 4 MET A 11 0 SHEET 2 A 4 CYS A 80 SER A 87 -1 O THR A 86 N VAL A 5 SHEET 3 A 4 HIS A 133 VAL A 138 -1 O MET A 136 N TRP A 83 SHEET 4 A 4 ILE A 120 HIS A 126 -1 N SER A 124 O HIS A 135 SHEET 1 B 2 PHE A 141 GLU A 142 0 SHEET 2 B 2 LYS A 145 LEU A 146 -1 O LYS A 145 N GLU A 142 SHEET 1 C 5 VAL C 5 MET C 11 0 SHEET 2 C 5 CYS C 80 THR C 86 -1 O ILE C 84 N ARG C 7 SHEET 3 C 5 HIS C 133 VAL C 138 -1 O VAL C 138 N ASP C 81 SHEET 4 C 5 ILE C 120 HIS C 126 -1 N HIS C 126 O HIS C 133 SHEET 5 C 5 TYR C 44 GLU C 45 -1 N TYR C 44 O VAL C 125 SHEET 1 D 2 PHE C 141 GLU C 142 0 SHEET 2 D 2 LYS C 145 LEU C 146 -1 O LYS C 145 N GLU C 142 LINK NE2 HIS A 22 MN MN A 201 1555 1555 2.22 LINK ND1 HIS A 126 MN MN A 201 1555 1555 2.21 LINK OE2 GLU A 129 MN MN A 201 1555 1555 2.40 LINK NE2 HIS A 133 MN MN A 201 1555 1555 2.22 LINK NE2 HIS A 135 MN MN A 201 1555 1555 2.21 LINK OD1 ASN A 181 NA NA A 204 1555 1555 3.17 LINK O MET A 199 MG MG A 202 1555 1555 2.04 LINK NE2 HIS C 22 MN MN C 201 1555 1555 2.51 LINK OE2 GLU C 129 MN MN C 201 1555 1555 2.55 LINK NE2 HIS C 133 MN MN C 201 1555 1555 2.05 LINK NE2 HIS C 135 MN MN C 201 1555 1555 2.12 LINK MN MN C 201 O HOH C 308 1555 1555 1.88 SITE 1 AC1 6 HIS A 22 HIS A 126 GLU A 129 HIS A 133 SITE 2 AC1 6 HIS A 135 DG E 26 SITE 1 AC2 2 MET A 199 DA F 21 SITE 1 AC3 4 ASP A 34 GLU A 113 ASP A 128 GLU A 129 SITE 1 AC4 1 ASN A 181 SITE 1 AC5 6 HIS C 22 HIS C 126 GLU C 129 HIS C 133 SITE 2 AC5 6 HIS C 135 HOH C 308 SITE 1 AC6 1 GLN C 58 SITE 1 AC7 4 DA B 1 ASN C 36 SER C 38 ARG C 39 SITE 1 AC8 3 ASN C 36 GLU C 129 SER C 130 SITE 1 AC9 2 HIS C 186 DT F 23 CRYST1 67.340 130.120 87.380 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014850 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007685 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011444 0.00000