PDB Short entry for 4NLG
HEADER    TRANSFERASE/DNA                         14-NOV-13   4NLG              
TITLE     Y-FAMILY DNA POLYMERASE CHIMERA DBH-DPO4(243-245)-DBH                 
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: DNA POLYMERASE IV;                                         
COMPND   3 CHAIN: A;                                                            
COMPND   4 SYNONYM: POL IV;                                                     
COMPND   5 EC: 2.7.7.7;                                                         
COMPND   6 ENGINEERED: YES;                                                     
COMPND   7 MUTATION: YES;                                                       
COMPND   8 MOL_ID: 2;                                                           
COMPND   9 MOLECULE: 5'-D(*GP*GP*CP*AP*CP*TP*GP*AP*TP*CP*GP*GP*G)-3';           
COMPND  10 CHAIN: P;                                                            
COMPND  11 ENGINEERED: YES;                                                     
COMPND  12 OTHER_DETAILS: PRIMER DNA;                                           
COMPND  13 MOL_ID: 3;                                                           
COMPND  14 MOLECULE: 5'-D(*TP*TP*AP*CP*GP*CP*CP*CP*TP*GP*AP*TP*CP*AP*GP*TP*GP*CP
COMPND  15 *C)-3';                                                              
COMPND  16 CHAIN: T;                                                            
COMPND  17 ENGINEERED: YES;                                                     
COMPND  18 OTHER_DETAILS: TEMPLATE DNA                                          
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: SULFOLOBUS ACIDOCALDARIUS;                      
SOURCE   3 ORGANISM_TAXID: 2285;                                                
SOURCE   4 GENE: DBH, SACI_0554;                                                
SOURCE   5 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   6 EXPRESSION_SYSTEM_TAXID: 469008;                                     
SOURCE   7 EXPRESSION_SYSTEM_STRAIN: BLR(DE3) PLYSS;                            
SOURCE   8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;                              
SOURCE   9 MOL_ID: 2;                                                           
SOURCE  10 SYNTHETIC: YES;                                                      
SOURCE  11 MOL_ID: 3;                                                           
SOURCE  12 SYNTHETIC: YES                                                       
KEYWDS    TRANSLESION SYNTHESIS, TRANSFERASE-DNA COMPLEX                        
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    P.MUKHERJEE,R.C.WILSON,J.D.PATA                                       
REVDAT   3   14-MAY-14 4NLG    1       JRNL                                     
REVDAT   2   19-FEB-14 4NLG    1       JRNL                                     
REVDAT   1   22-JAN-14 4NLG    0                                                
JRNL        AUTH   P.MUKHERJEE,R.C.WILSON,I.LAHIRI,J.D.PATA                     
JRNL        TITL   THREE RESIDUES OF THE INTERDOMAIN LINKER DETERMINE THE       
JRNL        TITL 2 CONFORMATION AND SINGLE-BASE DELETION FIDELITY OF Y-FAMILY   
JRNL        TITL 3 TRANSLESION POLYMERASES.                                     
JRNL        REF    J.BIOL.CHEM.                  V. 289  6323 2014              
JRNL        REFN                   ISSN 0021-9258                               
JRNL        PMID   24415763                                                     
JRNL        DOI    10.1074/JBC.M113.537860                                      
REMARK   2                                                                      
REMARK   2 RESOLUTION.    2.40 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : PHENIX (PHENIX.REFINE: 1.8.3_1479)                   
REMARK   3   AUTHORS     : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN            
REMARK   3               : DAVIS,KRESHNA GOPAL,RALF GROSSE-                     
REMARK   3               : KUNSTLEVE,LI-WEI HUNG,ROBERT IMMORMINO,              
REMARK   3               : TOM IOERGER,AIRLIE MCCOY,ERIK MCKEE,NIGEL            
REMARK   3               : MORIARTY,REETAL PAI,RANDY READ,JANE                  
REMARK   3               : RICHARDSON,DAVID RICHARDSON,TOD ROMO,JIM             
REMARK   3               : SACCHETTINI,NICHOLAS SAUTER,JACOB SMITH,             
REMARK   3               : LAURENT STORONI,TOM TERWILLIGER,PETER                
REMARK   3               : ZWART                                                
REMARK   3                                                                      
REMARK   3    REFINEMENT TARGET : ML                                            
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 28.70                          
REMARK   3   MIN(FOBS/SIGMA_FOBS)              : 0.180                          
REMARK   3   COMPLETENESS FOR RANGE        (%) : 92.5                           
REMARK   3   NUMBER OF REFLECTIONS             : 22557                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   R VALUE     (WORKING + TEST SET) : 0.177                           
REMARK   3   R VALUE            (WORKING SET) : 0.174                           
REMARK   3   FREE R VALUE                     : 0.231                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 5.150                           
REMARK   3   FREE R VALUE TEST SET COUNT      : 1161                            
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT (IN BINS).                           
REMARK   3   BIN  RESOLUTION RANGE  COMPL.    NWORK NFREE   RWORK  RFREE        
REMARK   3     1 28.6977 -  4.7936    0.99     2912   165  0.1450 0.1974        
REMARK   3     2  4.7936 -  3.8076    0.99     2868   153  0.1436 0.2003        
REMARK   3     3  3.8076 -  3.3271    0.97     2809   150  0.1746 0.2265        
REMARK   3     4  3.3271 -  3.0233    0.96     2778   151  0.1880 0.2468        
REMARK   3     5  3.0233 -  2.8068    0.92     2650   148  0.2241 0.2823        
REMARK   3     6  2.8068 -  2.6414    0.89     2557   137  0.2385 0.3219        
REMARK   3     7  2.6414 -  2.5092    0.86     2507   127  0.2484 0.3186        
REMARK   3     8  2.5092 -  2.4000    0.81     2315   130  0.2517 0.3291        
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELLING.                                             
REMARK   3   METHOD USED        : FLAT BULK SOLVENT MODEL                       
REMARK   3   SOLVENT RADIUS     : 1.11                                          
REMARK   3   SHRINKAGE RADIUS   : 0.90                                          
REMARK   3   K_SOL              : NULL                                          
REMARK   3   B_SOL              : NULL                                          
REMARK   3                                                                      
REMARK   3  ERROR ESTIMATES.                                                    
REMARK   3   COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED)     : 0.320            
REMARK   3   PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.950           
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : 45.97                          
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : NULL                           
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : NULL                                                 
REMARK   3    B22 (A**2) : NULL                                                 
REMARK   3    B33 (A**2) : NULL                                                 
REMARK   3    B12 (A**2) : NULL                                                 
REMARK   3    B13 (A**2) : NULL                                                 
REMARK   3    B23 (A**2) : NULL                                                 
REMARK   3                                                                      
REMARK   3  TWINNING INFORMATION.                                               
REMARK   3   FRACTION: NULL                                                     
REMARK   3   OPERATOR: NULL                                                     
REMARK   3                                                                      
REMARK   3  DEVIATIONS FROM IDEAL VALUES.                                       
REMARK   3                 RMSD          COUNT                                  
REMARK   3   BOND      :  0.009           3508                                  
REMARK   3   ANGLE     :  1.180           4866                                  
REMARK   3   CHIRALITY :  0.047            560                                  
REMARK   3   PLANARITY :  0.005            506                                  
REMARK   3   DIHEDRAL  : 20.949           1407                                  
REMARK   3                                                                      
REMARK   3  TLS DETAILS                                                         
REMARK   3   NUMBER OF TLS GROUPS  : 4                                          
REMARK   3   TLS GROUP : 1                                                      
REMARK   3    SELECTION: (chain 'P') or (chain 'T') or (chain 'A' and (resseq   
REMARK   3               403:403))                                              
REMARK   3    ORIGIN FOR THE GROUP (A):  19.3314 243.2321  22.4576              
REMARK   3    T TENSOR                                                          
REMARK   3      T11:   0.8335 T22:   0.4777                                     
REMARK   3      T33:   0.5082 T12:  -0.1005                                     
REMARK   3      T13:   0.0351 T23:  -0.0281                                     
REMARK   3    L TENSOR                                                          
REMARK   3      L11:   0.1791 L22:   3.8020                                     
REMARK   3      L33:   2.8345 L12:  -0.7864                                     
REMARK   3      L13:   0.2024 L23:   2.9998                                     
REMARK   3    S TENSOR                                                          
REMARK   3      S11:   0.1564 S12:   0.1932 S13:   0.4795                       
REMARK   3      S21:  -0.0317 S22:  -0.0337 S23:  -0.4026                       
REMARK   3      S31:  -0.5980 S32:  -0.1843 S33:  -0.1485                       
REMARK   3   TLS GROUP : 2                                                      
REMARK   3    SELECTION: chain 'A' and ((resseq 1:170))                         
REMARK   3    ORIGIN FOR THE GROUP (A):  31.4672 222.0900   7.0630              
REMARK   3    T TENSOR                                                          
REMARK   3      T11:   0.3180 T22:   0.4488                                     
REMARK   3      T33:   0.2640 T12:   0.0232                                     
REMARK   3      T13:   0.0038 T23:   0.0186                                     
REMARK   3    L TENSOR                                                          
REMARK   3      L11:   2.9486 L22:   2.3234                                     
REMARK   3      L33:   4.7840 L12:  -0.5479                                     
REMARK   3      L13:   0.7044 L23:   0.6785                                     
REMARK   3    S TENSOR                                                          
REMARK   3      S11:   0.0076 S12:  -0.0326 S13:  -0.0767                       
REMARK   3      S21:   0.1443 S22:   0.0748 S23:  -0.3286                       
REMARK   3      S31:   0.1663 S32:   0.8812 S33:  -0.0559                       
REMARK   3   TLS GROUP : 3                                                      
REMARK   3    SELECTION: chain 'A' and ((resseq 171:245))                       
REMARK   3    ORIGIN FOR THE GROUP (A):  38.5914 245.1380  13.5892              
REMARK   3    T TENSOR                                                          
REMARK   3      T11:   1.1782 T22:   0.8311                                     
REMARK   3      T33:   0.9981 T12:  -0.2815                                     
REMARK   3      T13:  -0.0298 T23:   0.1983                                     
REMARK   3    L TENSOR                                                          
REMARK   3      L11:   2.2278 L22:   3.3490                                     
REMARK   3      L33:   2.9973 L12:   0.6250                                     
REMARK   3      L13:  -0.8297 L23:  -0.0587                                     
REMARK   3    S TENSOR                                                          
REMARK   3      S11:  -0.1347 S12:   0.4886 S13:   1.2779                       
REMARK   3      S21:  -0.4740 S22:   0.3901 S23:  -0.4495                       
REMARK   3      S31:  -1.3781 S32:   0.5549 S33:  -0.2470                       
REMARK   3   TLS GROUP : 4                                                      
REMARK   3    SELECTION: chain 'A' and ((resseq 246:344))                       
REMARK   3    ORIGIN FOR THE GROUP (A):   6.1804 233.7951  22.4076              
REMARK   3    T TENSOR                                                          
REMARK   3      T11:   0.3912 T22:   0.3432                                     
REMARK   3      T33:   0.2819 T12:  -0.0130                                     
REMARK   3      T13:   0.0518 T23:  -0.0060                                     
REMARK   3    L TENSOR                                                          
REMARK   3      L11:   4.6118 L22:   2.8383                                     
REMARK   3      L33:   5.9959 L12:  -0.1142                                     
REMARK   3      L13:   0.3770 L23:   0.7327                                     
REMARK   3    S TENSOR                                                          
REMARK   3      S11:   0.0151 S12:   0.2925 S13:   0.3615                       
REMARK   3      S21:   0.0631 S22:  -0.1163 S23:   0.0607                       
REMARK   3      S31:  -0.2775 S32:  -0.0788 S33:   0.0783                       
REMARK   3                                                                      
REMARK   3  NCS DETAILS                                                         
REMARK   3   NUMBER OF NCS GROUPS : NULL                                        
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 4NLG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-NOV-13.                  
REMARK 100 THE RCSB ID CODE IS RCSB083351.                                      
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 24-JUL-12                          
REMARK 200  TEMPERATURE           (KELVIN) : 100                                
REMARK 200  PH                             : 6.0                                
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : NSLS                               
REMARK 200  BEAMLINE                       : X25                                
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 1.1                                
REMARK 200  MONOCHROMATOR                  : DOUBLE CRYSTAL SI(111)             
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : PIXEL                              
REMARK 200  DETECTOR MANUFACTURER          : DECTRIS PILATUS 6M                 
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : HKL-2000                           
REMARK 200  DATA SCALING SOFTWARE          : HKL-2000                           
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 23003                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 2.400                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 30.000                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : 0.000                              
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 91.7                               
REMARK 200  DATA REDUNDANCY                : 2.700                              
REMARK 200  R MERGE                    (I) : 0.04400                            
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 23.2000                            
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 2.43                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 80.7                               
REMARK 200  DATA REDUNDANCY IN SHELL       : 1.90                               
REMARK 200  R MERGE FOR SHELL          (I) : 0.19100                            
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : 2.900                              
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT        
REMARK 200 SOFTWARE USED: PHASER                                                
REMARK 200 STARTING MODEL: PDB ENTRY 4F4Y                                       
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 60.54                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.12                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: 14% PEG3350, 0.1 M CALCIUM ACETATE, 5%   
REMARK 280  GLYCEROL, 0.25 M SUCROSE, PH 6.0, VAPOR DIFFUSION, HANGING DROP,    
REMARK 280  TEMPERATURE 298K                                                    
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1                          
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -X,Y,-Z                                                 
REMARK 290       3555   X+1/2,Y+1/2,Z                                           
REMARK 290       4555   -X+1/2,Y+1/2,-Z                                         
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   2  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000 -1.000000        0.00000            
REMARK 290   SMTRY1   3  1.000000  0.000000  0.000000       60.09650            
REMARK 290   SMTRY2   3  0.000000  1.000000  0.000000       51.53350            
REMARK 290   SMTRY3   3  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   4 -1.000000  0.000000  0.000000       60.09650            
REMARK 290   SMTRY2   4  0.000000  1.000000  0.000000       51.53350            
REMARK 290   SMTRY3   4  0.000000  0.000000 -1.000000        0.00000            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC                          
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC                   
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 TOTAL BURIED SURFACE AREA: 5500 ANGSTROM**2                          
REMARK 350 SURFACE AREA OF THE COMPLEX: 20280 ANGSTROM**2                       
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -58.0 KCAL/MOL                        
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, P, T                               
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     LYS A   345                                                      
REMARK 465     THR A   346                                                      
REMARK 465     ASN A   347                                                      
REMARK 465     LEU A   348                                                      
REMARK 465     SER A   349                                                      
REMARK 465     ASP A   350                                                      
REMARK 465     PHE A   351                                                      
REMARK 465     PHE A   352                                                      
REMARK 465     ASP A   353                                                      
REMARK 465     ILE A   354                                                      
REMARK 465     GLY A   355                                                      
REMARK 465     GLY A   356                                                      
REMARK 465     HIS A   357                                                      
REMARK 465     HIS A   358                                                      
REMARK 465     HIS A   359                                                      
REMARK 465     HIS A   360                                                      
REMARK 465     HIS A   361                                                      
REMARK 465     HIS A   362                                                      
REMARK 465      DT T     1                                                      
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS                                      
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3)               
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   RES CSSEQI ATM2   DEVIATION                     
REMARK 500     DG T  10   O3'    DG T  10   C3'    -0.037                       
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES                                       
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)              
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   ATM2   ATM3                                     
REMARK 500     DA T   3   O4' -  C1' -  N9  ANGL. DEV. =   1.9 DEGREES          
REMARK 500     DC T   7   C1' -  O4' -  C4' ANGL. DEV. =  -6.2 DEGREES          
REMARK 500     DC T   7   O4' -  C1' -  N1  ANGL. DEV. =   3.1 DEGREES          
REMARK 500     DT T   9   O4' -  C4' -  C3' ANGL. DEV. =  -2.5 DEGREES          
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    TYR A  10       58.48     18.65                                   
REMARK 500    ALA A  68       59.80   -140.41                                   
REMARK 500    SER A 103     -173.71   -173.59                                   
REMARK 500    GLN A 201       -7.48   -140.86                                   
REMARK 500    THR A 218      -10.49   -157.58                                   
REMARK 500    SER A 235       76.44   -161.46                                   
REMARK 500    LYS A 327      -22.97     81.82                                   
REMARK 500    ARG A 328      -30.40   -131.07                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 620                                                                      
REMARK 620 METAL COORDINATION                                                   
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):                             
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              CA A 402  CA                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 DCP A 403   O3G                                                    
REMARK 620 2 PHE A   8   O   114.1                                              
REMARK 620 3 ASP A 105   OD2 162.1  79.2                                        
REMARK 620 4 DCP A 403   O2A  76.4 162.1  87.7                                  
REMARK 620 5 DCP A 403   O2B  81.5  91.8  86.4  74.9                            
REMARK 620 6 ASP A   7   OD1 116.4  99.4  70.5  87.7 151.7                      
REMARK 620 N                    1     2     3     4     5                       
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              CA A 401  CA                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 ASP A 105   OD1                                                    
REMARK 620 2 ASP A   7   OD1  68.6                                              
REMARK 620 3 DCP A 403   O2A  85.8  84.1                                        
REMARK 620 4  DG P  13   O3'  81.9 149.4  85.9                                  
REMARK 620 5 ASP A   7   OD2 116.6  49.2  97.8 161.3                            
REMARK 620 6 GLU A 106   OE1 104.2  94.3 168.6 100.8  73.0                      
REMARK 620 7 HOH A 508   O   169.0 117.6  85.9  90.3  71.8  84.8                
REMARK 620 N                    1     2     3     4     5     6                 
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 401                  
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC2                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 402                  
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC3                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DCP A 403                 
DBREF  4NLG A    1   354  UNP    Q4JB80   DPO4_SULAC       1    354             
DBREF  4NLG P    1    13  PDB    4NLG     4NLG             1     13             
DBREF  4NLG T    1    19  PDB    4NLG     4NLG             1     19             
SEQADV 4NLG ARG A  243  UNP  Q4JB80    LYS   243 ENGINEERED MUTATION            
SEQADV 4NLG LYS A  244  UNP  Q4JB80    ILE   244 ENGINEERED MUTATION            
SEQADV 4NLG SER A  245  UNP  Q4JB80    PRO   245 ENGINEERED MUTATION            
SEQADV 4NLG GLY A  355  UNP  Q4JB80              EXPRESSION TAG                 
SEQADV 4NLG GLY A  356  UNP  Q4JB80              EXPRESSION TAG                 
SEQADV 4NLG HIS A  357  UNP  Q4JB80              EXPRESSION TAG                 
SEQADV 4NLG HIS A  358  UNP  Q4JB80              EXPRESSION TAG                 
SEQADV 4NLG HIS A  359  UNP  Q4JB80              EXPRESSION TAG                 
SEQADV 4NLG HIS A  360  UNP  Q4JB80              EXPRESSION TAG                 
SEQADV 4NLG HIS A  361  UNP  Q4JB80              EXPRESSION TAG                 
SEQADV 4NLG HIS A  362  UNP  Q4JB80              EXPRESSION TAG                 
SEQRES   1 A  362  MET ILE VAL ILE PHE VAL ASP PHE ASP TYR PHE PHE ALA          
SEQRES   2 A  362  GLN VAL GLU GLU VAL LEU ASN PRO GLN TYR LYS GLY LYS          
SEQRES   3 A  362  PRO LEU VAL VAL CYS VAL TYR SER GLY ARG THR LYS THR          
SEQRES   4 A  362  SER GLY ALA VAL ALA THR ALA ASN TYR GLU ALA ARG LYS          
SEQRES   5 A  362  LEU GLY VAL LYS ALA GLY MET PRO ILE ILE LYS ALA MET          
SEQRES   6 A  362  GLN ILE ALA PRO SER ALA ILE TYR VAL PRO MET ARG LYS          
SEQRES   7 A  362  PRO ILE TYR GLU ALA PHE SER ASN ARG ILE MET ASN LEU          
SEQRES   8 A  362  LEU ASN LYS HIS ALA ASP LYS ILE GLU VAL ALA SER ILE          
SEQRES   9 A  362  ASP GLU ALA TYR LEU ASP VAL THR ASN LYS VAL GLU GLY          
SEQRES  10 A  362  ASN PHE GLU ASN GLY ILE GLU LEU ALA ARG LYS ILE LYS          
SEQRES  11 A  362  GLN GLU ILE LEU GLU LYS GLU LYS ILE THR VAL THR VAL          
SEQRES  12 A  362  GLY VAL ALA PRO ASN LYS ILE LEU ALA LYS ILE ILE ALA          
SEQRES  13 A  362  ASP LYS SER LYS PRO ASN GLY LEU GLY VAL ILE ARG PRO          
SEQRES  14 A  362  THR GLU VAL GLN ASP PHE LEU ASN GLU LEU ASP ILE ASP          
SEQRES  15 A  362  GLU ILE PRO GLY ILE GLY SER VAL LEU ALA ARG ARG LEU          
SEQRES  16 A  362  ASN GLU LEU GLY ILE GLN LYS LEU ARG ASP ILE LEU SER          
SEQRES  17 A  362  LYS ASN TYR ASN GLU LEU GLU LYS ILE THR GLY LYS ALA          
SEQRES  18 A  362  LYS ALA LEU TYR LEU LEU LYS LEU ALA GLN ASN LYS TYR          
SEQRES  19 A  362  SER GLU PRO VAL GLU ASN LYS SER ARG LYS SER HIS GLY          
SEQRES  20 A  362  ARG TYR LEU THR LEU PRO TYR ASN THR ARG ASP VAL LYS          
SEQRES  21 A  362  VAL ILE LEU PRO TYR LEU LYS LYS ALA ILE ASN GLU ALA          
SEQRES  22 A  362  TYR ASN LYS VAL ASN GLY ILE PRO MET ARG ILE THR VAL          
SEQRES  23 A  362  ILE ALA ILE MET GLU ASP LEU ASP ILE LEU SER LYS GLY          
SEQRES  24 A  362  LYS LYS PHE LYS HIS GLY ILE SER ILE ASP ASN ALA TYR          
SEQRES  25 A  362  LYS VAL ALA GLU ASP LEU LEU ARG GLU LEU LEU VAL ARG          
SEQRES  26 A  362  ASP LYS ARG ARG ASN VAL ARG ARG ILE GLY VAL LYS LEU          
SEQRES  27 A  362  ASP ASN ILE ILE ILE ASN LYS THR ASN LEU SER ASP PHE          
SEQRES  28 A  362  PHE ASP ILE GLY GLY HIS HIS HIS HIS HIS HIS                  
SEQRES   1 P   13   DG  DG  DC  DA  DC  DT  DG  DA  DT  DC  DG  DG  DG          
SEQRES   1 T   19   DT  DT  DA  DC  DG  DC  DC  DC  DT  DG  DA  DT  DC          
SEQRES   2 T   19   DA  DG  DT  DG  DC  DC                                      
HET     CA  A 401       1                                                       
HET     CA  A 402       1                                                       
HET    DCP  A 403      28                                                       
HETNAM      CA CALCIUM ION                                                      
HETNAM     DCP 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE                                 
FORMUL   4   CA    2(CA 2+)                                                     
FORMUL   6  DCP    C9 H16 N3 O13 P3                                             
FORMUL   7  HOH   *41(H2 O)                                                     
HELIX    1   1 TYR A   10  ASN A   20  1                                  11    
HELIX    2   2 PRO A   21  LYS A   24  5                                   4    
HELIX    3   3 ASN A   47  LEU A   53  1                                   7    
HELIX    4   4 PRO A   60  ALA A   68  1                                   9    
HELIX    5   5 ARG A   77  LYS A   94  1                                  18    
HELIX    6   6 ASN A  118  LYS A  138  1                                  21    
HELIX    7   7 ASN A  148  LYS A  158  1                                  11    
HELIX    8   8 ARG A  168  THR A  170  5                                   3    
HELIX    9   9 GLU A  171  LEU A  179  1                                   9    
HELIX   10  10 GLY A  188  GLU A  197  1                                  10    
HELIX   11  11 ARG A  204  LYS A  209  1                                   6    
HELIX   12  12 ASN A  210  LEU A  214  5                                   5    
HELIX   13  13 THR A  218  GLN A  231  1                                  14    
HELIX   14  14 ASP A  258  ASN A  275  1                                  18    
HELIX   15  15 SER A  307  LYS A  327  1                                  21    
SHEET    1   A 5 LYS A  98  SER A 103  0                                        
SHEET    2   A 5 GLU A 106  ASP A 110 -1  O  TYR A 108   N  GLU A 100           
SHEET    3   A 5 VAL A   3  PHE A   8 -1  N  ILE A   4   O  LEU A 109           
SHEET    4   A 5 VAL A 141  ALA A 146 -1  O  ALA A 146   N  VAL A   3           
SHEET    5   A 5 LEU A 164  VAL A 166  1  O  GLY A 165   N  VAL A 143           
SHEET    1   B 3 GLY A  41  ALA A  46  0                                        
SHEET    2   B 3 LEU A  28  TYR A  33 -1  N  VAL A  32   O  ALA A  42           
SHEET    3   B 3 ILE A  72  PRO A  75  1  O  VAL A  74   N  CYS A  31           
SHEET    1   C 4 SER A 245  THR A 256  0                                        
SHEET    2   C 4 VAL A 331  ILE A 343 -1  O  ILE A 334   N  LEU A 250           
SHEET    3   C 4 GLY A 279  MET A 290 -1  N  ILE A 289   O  ARG A 332           
SHEET    4   C 4 ILE A 295  LYS A 301 -1  O  LYS A 298   N  VAL A 286           
LINK        CA    CA A 402                 O3G DCP A 403     1555   1555  2.23  
LINK         O   PHE A   8                CA    CA A 402     1555   1555  2.24  
LINK         OD2 ASP A 105                CA    CA A 402     1555   1555  2.33  
LINK        CA    CA A 402                 O2A DCP A 403     1555   1555  2.41  
LINK        CA    CA A 402                 O2B DCP A 403     1555   1555  2.43  
LINK         OD1 ASP A 105                CA    CA A 401     1555   1555  2.47  
LINK         OD1 ASP A   7                CA    CA A 402     1555   1555  2.49  
LINK         OD1 ASP A   7                CA    CA A 401     1555   1555  2.51  
LINK        CA    CA A 401                 O2A DCP A 403     1555   1555  2.55  
LINK         O3'  DG P  13                CA    CA A 401     1555   1555  2.65  
LINK         OD2 ASP A   7                CA    CA A 401     1555   1555  2.72  
LINK         OE1 GLU A 106                CA    CA A 401     1555   1555  3.16  
LINK        CA    CA A 401                 O   HOH A 508     1555   1555  2.37  
CISPEP   1 LYS A  160    PRO A  161          0        -7.62                     
SITE     1 AC1  7 ASP A   7  ASP A 105  GLU A 106   CA A 402                    
SITE     2 AC1  7 DCP A 403  HOH A 508   DG P  13                               
SITE     1 AC2  5 ASP A   7  PHE A   8  ASP A 105   CA A 401                    
SITE     2 AC2  5 DCP A 403                                                     
SITE     1 AC3 16 ASP A   7  PHE A   8  ASP A   9  TYR A  10                    
SITE     2 AC3 16 PHE A  11  PHE A  12  THR A  45  TYR A  48                    
SITE     3 AC3 16 ARG A  51  ASP A 105  LYS A 160   CA A 401                    
SITE     4 AC3 16  CA A 402  HOH A 513   DG P  13   DG T   5                    
CRYST1  120.193  103.067   53.049  90.00 105.39  90.00 C 1 2 1       4          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.008320  0.000000  0.002290        0.00000                         
SCALE2      0.000000  0.009702  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.019552        0.00000