PDB Short entry for 4NMU HEADER OXIDOREDUCTASE 15-NOV-13 4NMU TITLE CRYSTAL STRUCTURE OF THIOL-DISULFIDE OXIDOREDUCTASE FROM BACILLUS STR. TITLE 2 'AMES ANCESTOR' COMPND MOL_ID: 1; COMPND 2 MOLECULE: THIOL-DISULFIDE OXIDOREDUCTASE RESA; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS ANTHRACIS; SOURCE 3 ORGANISM_COMMON: ANTHRAX,ANTHRAX BACTERIUM; SOURCE 4 ORGANISM_TAXID: 1392; SOURCE 5 STRAIN: AMES ANCESTOR; SOURCE 6 GENE: BAS1383, BA_1494, GBAA_1494, RESA; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) GOLD; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PMCSG53 KEYWDS STRUCTURAL GENOMICS, NIAID, NATIONAL INSTITUTE OF ALLERGY AND KEYWDS 2 INFECTIOUS DISEASES, CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS KEYWDS 3 DISEASES, CSGID, ALPHA-BETA STRUCTURE, ALPHA-BETA-ALPHA SANDWICH, KEYWDS 4 OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.KIM,M.ZHOU,S.SHATSMAN,W.F.ANDERSON,A.JOACHIMIAK,CENTER FOR AUTHOR 2 STRUCTURAL GENOMICS OF INFECTIOUS DISEASES (CSGID) REVDAT 1 18-DEC-13 4NMU 0 JRNL AUTH Y.KIM,M.ZHOU,S.SHATSMAN,W.F.ANDERSON,A.JOACHIMIAK, JRNL AUTH 2 CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES JRNL AUTH 3 (CSGID) JRNL TITL CRYSTAL STRUCTURE OF THIOL-DISULFIDE OXIDOREDUCTASE FROM JRNL TITL 2 BACILLUS STR. 'AMES ANCESTOR' JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.35 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.4_1496) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VICENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE- REMARK 3 : KUNSTLEVE,LI-WEI HUNG,ROBERT IMMORMINO, REMARK 3 : TOM IOERGER,AIRLIE MCCOY,ERIK MCKEE,NIGEL REMARK 3 : MORIARTY,REETAL PAI,RANDY READ,JANE REMARK 3 : RICHARDSON,DAVID RICHARDSON,TOD ROMO,JIM REMARK 3 : SACCHETTINI,NICHOLAS SAUTER,JACOB SMITH, REMARK 3 : LAURENT STORONI,TOM TERWILLIGER,PETER REMARK 3 : ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : TWIN_LSQ_F REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.35 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.27 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.0 REMARK 3 NUMBER OF REFLECTIONS : 99386 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.141 REMARK 3 R VALUE (WORKING SET) : 0.137 REMARK 3 FREE R VALUE : 0.176 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.220 REMARK 3 FREE R VALUE TEST SET COUNT : 5184 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 20.6005 - 3.6586 0.89 4799 246 0.0793 0.1248 REMARK 3 2 3.6586 - 2.9066 0.94 5050 261 0.0866 0.1378 REMARK 3 3 2.9066 - 2.5399 0.93 5034 279 0.1178 0.1593 REMARK 3 4 2.5399 - 2.3080 0.93 4986 281 0.1303 0.1735 REMARK 3 5 2.3080 - 2.1428 0.92 4967 277 0.1383 0.1755 REMARK 3 6 2.1428 - 2.0166 0.92 4979 256 0.1533 0.1987 REMARK 3 7 2.0166 - 1.9156 0.92 4983 252 0.1634 0.1923 REMARK 3 8 1.9156 - 1.8323 0.91 4899 276 0.1771 0.1960 REMARK 3 9 1.8323 - 1.7618 0.91 4960 261 0.1856 0.1986 REMARK 3 10 1.7618 - 1.7010 0.91 4915 249 0.1884 0.2018 REMARK 3 11 1.7010 - 1.6479 0.91 4921 234 0.1911 0.2221 REMARK 3 12 1.6479 - 1.6008 0.90 4839 277 0.1965 0.2086 REMARK 3 13 1.6008 - 1.5587 0.90 4913 285 0.1944 0.2171 REMARK 3 14 1.5587 - 1.5206 0.90 4854 240 0.2031 0.2241 REMARK 3 15 1.5206 - 1.4861 0.90 4811 235 0.2060 0.2567 REMARK 3 16 1.4861 - 1.4545 0.89 4861 243 0.2093 0.2335 REMARK 3 17 1.4545 - 1.4254 0.88 4746 262 0.2211 0.2503 REMARK 3 18 1.4254 - 1.3985 0.82 4460 217 0.2274 0.2623 REMARK 3 19 1.3985 - 1.3735 0.69 3732 207 0.2360 0.2609 REMARK 3 20 1.3735 - 1.3502 0.50 2698 125 0.2526 0.2874 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.420 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 11.43 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.40 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: 0.5000 REMARK 3 OPERATOR: H,-K,-L REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 4827 REMARK 3 ANGLE : 1.269 6468 REMARK 3 CHIRALITY : 0.085 692 REMARK 3 PLANARITY : 0.007 828 REMARK 3 DIHEDRAL : 15.067 1875 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4NMU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-NOV-13. REMARK 100 THE RCSB ID CODE IS RCSB083400. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-APR-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97897 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 102076 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.340 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.5 REMARK 200 DATA REDUNDANCY : 2.400 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.02200 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 13.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.35 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.37 REMARK 200 COMPLETENESS FOR SHELL (%) : 75.6 REMARK 200 DATA REDUNDANCY IN SHELL : 2.10 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.30000 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: HKL3000, SHELXS,MLPHARE,DM REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 35.37 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.90 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M LITHIUM CHLORIDE, 0.1 M SODIUM REMARK 280 ACETATE, 30 %(W/V) PEG 6000, PH 7.5, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER B -2 REMARK 465 ASN B -1 REMARK 465 ALA B 0 REMARK 465 ALA B 1 REMARK 465 ASP B 2 REMARK 465 LYS B 3 REMARK 465 GLU B 4 REMARK 465 SER D -2 REMARK 465 ASN D -1 REMARK 465 ALA D 0 REMARK 465 ALA D 1 REMARK 465 ASP D 2 REMARK 465 LYS D 3 REMARK 465 GLU D 4 REMARK 465 LYS D 5 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CYS B 44 CA - CB - SG ANGL. DEV. = 8.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 64 7.55 -66.61 REMARK 500 GLU D 124 143.96 -172.80 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 434 DISTANCE = 7.00 ANGSTROMS REMARK 525 HOH B 447 DISTANCE = 6.67 ANGSTROMS REMARK 525 HOH D 415 DISTANCE = 6.51 ANGSTROMS REMARK 525 HOH D 428 DISTANCE = 7.64 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG D 201 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU D 48 OE2 REMARK 620 2 HOH D 335 O 68.9 REMARK 620 3 HOH D 449 O 144.4 104.7 REMARK 620 4 HOH D 317 O 94.3 100.3 121.1 REMARK 620 5 HOH D 312 O 69.8 85.4 74.9 160.1 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACY A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACY B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACY B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACY B 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 206 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 207 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL C 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO C 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO C 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO C 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO C 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO C 206 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG D 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACY D 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG D 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO D 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO D 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO D 206 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: CSGID-IDP02519 RELATED DB: TARGETTRACK DBREF 4NMU A 1 144 UNP Q81SZ9 RESA_BACAN 30 173 DBREF 4NMU B 1 144 UNP Q81SZ9 RESA_BACAN 30 173 DBREF 4NMU C 1 144 UNP Q81SZ9 RESA_BACAN 30 173 DBREF 4NMU D 1 144 UNP Q81SZ9 RESA_BACAN 30 173 SEQADV 4NMU SER A -2 UNP Q81SZ9 EXPRESSION TAG SEQADV 4NMU ASN A -1 UNP Q81SZ9 EXPRESSION TAG SEQADV 4NMU ALA A 0 UNP Q81SZ9 EXPRESSION TAG SEQADV 4NMU SER B -2 UNP Q81SZ9 EXPRESSION TAG SEQADV 4NMU ASN B -1 UNP Q81SZ9 EXPRESSION TAG SEQADV 4NMU ALA B 0 UNP Q81SZ9 EXPRESSION TAG SEQADV 4NMU SER C -2 UNP Q81SZ9 EXPRESSION TAG SEQADV 4NMU ASN C -1 UNP Q81SZ9 EXPRESSION TAG SEQADV 4NMU ALA C 0 UNP Q81SZ9 EXPRESSION TAG SEQADV 4NMU SER D -2 UNP Q81SZ9 EXPRESSION TAG SEQADV 4NMU ASN D -1 UNP Q81SZ9 EXPRESSION TAG SEQADV 4NMU ALA D 0 UNP Q81SZ9 EXPRESSION TAG SEQRES 1 A 147 SER ASN ALA ALA ASP LYS GLU LYS MSE GLN ILE GLY LYS SEQRES 2 A 147 GLU ALA PRO ASN PHE VAL VAL THR ASP LEU GLU GLY LYS SEQRES 3 A 147 LYS ILE GLU LEU LYS ASP LEU LYS GLY LYS GLY VAL PHE SEQRES 4 A 147 LEU ASN PHE TRP GLY THR TRP CYS LYS PRO CYS GLU LYS SEQRES 5 A 147 GLU MSE PRO TYR MSE ASN GLU LEU TYR PRO LYS TYR LYS SEQRES 6 A 147 GLU LYS GLY VAL GLU ILE ILE ALA LEU ASP ALA ASP GLU SEQRES 7 A 147 THR ASP ILE ALA VAL LYS ASN PHE VAL ASN GLN TYR GLY SEQRES 8 A 147 LEU LYS PHE PRO VAL ALA ILE ASP LYS GLY GLN LYS ILE SEQRES 9 A 147 ILE GLY THR TYR GLY VAL GLY PRO LEU PRO THR SER PHE SEQRES 10 A 147 LEU ILE ASP LYS ASP GLY LYS VAL VAL GLU GLN ILE ILE SEQRES 11 A 147 GLY GLU GLN THR LYS GLU GLN LEU GLU GLY TYR LEU LYS SEQRES 12 A 147 LYS ILE THR PRO SEQRES 1 B 147 SER ASN ALA ALA ASP LYS GLU LYS MSE GLN ILE GLY LYS SEQRES 2 B 147 GLU ALA PRO ASN PHE VAL VAL THR ASP LEU GLU GLY LYS SEQRES 3 B 147 LYS ILE GLU LEU LYS ASP LEU LYS GLY LYS GLY VAL PHE SEQRES 4 B 147 LEU ASN PHE TRP GLY THR TRP CYS LYS PRO CYS GLU LYS SEQRES 5 B 147 GLU MSE PRO TYR MSE ASN GLU LEU TYR PRO LYS TYR LYS SEQRES 6 B 147 GLU LYS GLY VAL GLU ILE ILE ALA LEU ASP ALA ASP GLU SEQRES 7 B 147 THR ASP ILE ALA VAL LYS ASN PHE VAL ASN GLN TYR GLY SEQRES 8 B 147 LEU LYS PHE PRO VAL ALA ILE ASP LYS GLY GLN LYS ILE SEQRES 9 B 147 ILE GLY THR TYR GLY VAL GLY PRO LEU PRO THR SER PHE SEQRES 10 B 147 LEU ILE ASP LYS ASP GLY LYS VAL VAL GLU GLN ILE ILE SEQRES 11 B 147 GLY GLU GLN THR LYS GLU GLN LEU GLU GLY TYR LEU LYS SEQRES 12 B 147 LYS ILE THR PRO SEQRES 1 C 147 SER ASN ALA ALA ASP LYS GLU LYS MSE GLN ILE GLY LYS SEQRES 2 C 147 GLU ALA PRO ASN PHE VAL VAL THR ASP LEU GLU GLY LYS SEQRES 3 C 147 LYS ILE GLU LEU LYS ASP LEU LYS GLY LYS GLY VAL PHE SEQRES 4 C 147 LEU ASN PHE TRP GLY THR TRP CYS LYS PRO CYS GLU LYS SEQRES 5 C 147 GLU MSE PRO TYR MSE ASN GLU LEU TYR PRO LYS TYR LYS SEQRES 6 C 147 GLU LYS GLY VAL GLU ILE ILE ALA LEU ASP ALA ASP GLU SEQRES 7 C 147 THR ASP ILE ALA VAL LYS ASN PHE VAL ASN GLN TYR GLY SEQRES 8 C 147 LEU LYS PHE PRO VAL ALA ILE ASP LYS GLY GLN LYS ILE SEQRES 9 C 147 ILE GLY THR TYR GLY VAL GLY PRO LEU PRO THR SER PHE SEQRES 10 C 147 LEU ILE ASP LYS ASP GLY LYS VAL VAL GLU GLN ILE ILE SEQRES 11 C 147 GLY GLU GLN THR LYS GLU GLN LEU GLU GLY TYR LEU LYS SEQRES 12 C 147 LYS ILE THR PRO SEQRES 1 D 147 SER ASN ALA ALA ASP LYS GLU LYS MSE GLN ILE GLY LYS SEQRES 2 D 147 GLU ALA PRO ASN PHE VAL VAL THR ASP LEU GLU GLY LYS SEQRES 3 D 147 LYS ILE GLU LEU LYS ASP LEU LYS GLY LYS GLY VAL PHE SEQRES 4 D 147 LEU ASN PHE TRP GLY THR TRP CYS LYS PRO CYS GLU LYS SEQRES 5 D 147 GLU MSE PRO TYR MSE ASN GLU LEU TYR PRO LYS TYR LYS SEQRES 6 D 147 GLU LYS GLY VAL GLU ILE ILE ALA LEU ASP ALA ASP GLU SEQRES 7 D 147 THR ASP ILE ALA VAL LYS ASN PHE VAL ASN GLN TYR GLY SEQRES 8 D 147 LEU LYS PHE PRO VAL ALA ILE ASP LYS GLY GLN LYS ILE SEQRES 9 D 147 ILE GLY THR TYR GLY VAL GLY PRO LEU PRO THR SER PHE SEQRES 10 D 147 LEU ILE ASP LYS ASP GLY LYS VAL VAL GLU GLN ILE ILE SEQRES 11 D 147 GLY GLU GLN THR LYS GLU GLN LEU GLU GLY TYR LEU LYS SEQRES 12 D 147 LYS ILE THR PRO MODRES 4NMU MSE A 6 MET SELENOMETHIONINE MODRES 4NMU MSE A 51 MET SELENOMETHIONINE MODRES 4NMU MSE A 54 MET SELENOMETHIONINE MODRES 4NMU MSE B 6 MET SELENOMETHIONINE MODRES 4NMU MSE B 51 MET SELENOMETHIONINE MODRES 4NMU MSE B 54 MET SELENOMETHIONINE MODRES 4NMU MSE C 6 MET SELENOMETHIONINE MODRES 4NMU MSE C 51 MET SELENOMETHIONINE MODRES 4NMU MSE C 54 MET SELENOMETHIONINE MODRES 4NMU MSE D 6 MET SELENOMETHIONINE MODRES 4NMU MSE D 51 MET SELENOMETHIONINE MODRES 4NMU MSE D 54 MET SELENOMETHIONINE HET MSE A 6 8 HET MSE A 51 8 HET MSE A 54 16 HET MSE B 6 8 HET MSE B 51 16 HET MSE B 54 16 HET MSE C 6 8 HET MSE C 51 16 HET MSE C 54 16 HET MSE D 6 8 HET MSE D 51 16 HET MSE D 54 16 HET ACY A 201 4 HET EDO A 202 4 HET EDO A 203 4 HET GOL A 204 6 HET EDO A 205 4 HET ACY B 201 4 HET ACY B 202 4 HET ACY B 203 4 HET EDO B 204 4 HET EDO B 205 4 HET EDO B 206 4 HET EDO B 207 4 HET GOL C 201 6 HET EDO C 202 4 HET EDO C 203 4 HET EDO C 204 4 HET EDO C 205 4 HET EDO C 206 4 HET MG D 201 1 HET ACY D 202 4 HET PEG D 203 7 HET EDO D 204 4 HET EDO D 205 4 HET EDO D 206 4 HETNAM MSE SELENOMETHIONINE HETNAM ACY ACETIC ACID HETNAM EDO 1,2-ETHANEDIOL HETNAM GOL GLYCEROL HETNAM MG MAGNESIUM ION HETNAM PEG DI(HYDROXYETHYL)ETHER HETSYN EDO ETHYLENE GLYCOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 MSE 12(C5 H11 N O2 SE) FORMUL 5 ACY 5(C2 H4 O2) FORMUL 6 EDO 15(C2 H6 O2) FORMUL 8 GOL 2(C3 H8 O3) FORMUL 23 MG MG 2+ FORMUL 25 PEG C4 H10 O3 FORMUL 29 HOH *606(H2 O) HELIX 1 1 ASN A -1 GLU A 4 5 6 HELIX 2 2 LYS A 28 LYS A 31 5 4 HELIX 3 3 CYS A 44 LYS A 64 1 21 HELIX 4 4 THR A 76 GLY A 88 1 13 HELIX 5 5 GLN A 99 GLY A 106 1 8 HELIX 6 6 THR A 131 ILE A 142 1 12 HELIX 7 7 LYS B 28 LYS B 31 5 4 HELIX 8 8 CYS B 44 GLU B 63 1 20 HELIX 9 9 THR B 76 GLY B 88 1 13 HELIX 10 10 GLN B 99 TYR B 105 1 7 HELIX 11 11 THR B 131 ILE B 142 1 12 HELIX 12 12 LYS C 28 LYS C 31 5 4 HELIX 13 13 CYS C 44 GLU C 63 1 20 HELIX 14 14 THR C 76 TYR C 87 1 12 HELIX 15 15 GLN C 99 TYR C 105 1 7 HELIX 16 16 THR C 131 THR C 143 1 13 HELIX 17 17 LYS D 28 LYS D 31 5 4 HELIX 18 18 CYS D 44 GLU D 63 1 20 HELIX 19 19 THR D 76 GLY D 88 1 13 HELIX 20 20 GLN D 99 TYR D 105 1 7 HELIX 21 21 THR D 131 ILE D 142 1 12 SHEET 1 A 6 LYS A 10 GLU A 11 0 SHEET 2 A 6 LYS A 121 ILE A 127 -1 O VAL A 122 N LYS A 10 SHEET 3 A 6 THR A 112 ILE A 116 -1 N SER A 113 O ILE A 126 SHEET 4 A 6 GLY A 34 TRP A 40 -1 N VAL A 35 O ILE A 116 SHEET 5 A 6 VAL A 66 ASP A 72 1 O GLU A 67 N GLY A 34 SHEET 6 A 6 VAL A 93 ILE A 95 1 O ALA A 94 N ASP A 72 SHEET 1 B 2 VAL A 16 THR A 18 0 SHEET 2 B 2 LYS A 24 GLU A 26 -1 O ILE A 25 N VAL A 17 SHEET 1 C 2 VAL B 16 THR B 18 0 SHEET 2 C 2 LYS B 24 GLU B 26 -1 O ILE B 25 N VAL B 17 SHEET 1 D 5 VAL B 93 ILE B 95 0 SHEET 2 D 5 VAL B 66 ASP B 72 1 N ASP B 72 O ALA B 94 SHEET 3 D 5 GLY B 34 TRP B 40 1 N ASN B 38 O LEU B 71 SHEET 4 D 5 THR B 112 ILE B 116 -1 O ILE B 116 N VAL B 35 SHEET 5 D 5 VAL B 122 ILE B 127 -1 O ILE B 126 N SER B 113 SHEET 1 E 2 VAL C 16 THR C 18 0 SHEET 2 E 2 LYS C 24 GLU C 26 -1 O ILE C 25 N VAL C 17 SHEET 1 F 5 VAL C 93 ILE C 95 0 SHEET 2 F 5 VAL C 66 ASP C 72 1 N ASP C 72 O ALA C 94 SHEET 3 F 5 GLY C 34 TRP C 40 1 N GLY C 34 O GLU C 67 SHEET 4 F 5 THR C 112 ILE C 116 -1 O ILE C 116 N VAL C 35 SHEET 5 F 5 VAL C 122 ILE C 127 -1 O ILE C 126 N SER C 113 SHEET 1 G 2 VAL D 16 THR D 18 0 SHEET 2 G 2 LYS D 24 GLU D 26 -1 O ILE D 25 N VAL D 17 SHEET 1 H 5 VAL D 93 ILE D 95 0 SHEET 2 H 5 VAL D 66 ASP D 72 1 N ASP D 72 O ALA D 94 SHEET 3 H 5 GLY D 34 TRP D 40 1 N GLY D 34 O GLU D 67 SHEET 4 H 5 THR D 112 ILE D 116 -1 O THR D 112 N PHE D 39 SHEET 5 H 5 VAL D 122 ILE D 127 -1 O ILE D 126 N SER D 113 SSBOND 1 CYS A 44 CYS A 47 1555 1555 2.37 SSBOND 2 CYS B 44 CYS B 47 1555 1555 2.29 LINK C LYS A 5 N MSE A 6 1555 1555 1.33 LINK C MSE A 6 N GLN A 7 1555 1555 1.32 LINK C GLU A 50 N MSE A 51 1555 1555 1.33 LINK C MSE A 51 N PRO A 52 1555 1555 1.35 LINK C TYR A 53 N AMSE A 54 1555 1555 1.33 LINK C TYR A 53 N BMSE A 54 1555 1555 1.33 LINK C AMSE A 54 N ASN A 55 1555 1555 1.33 LINK C BMSE A 54 N ASN A 55 1555 1555 1.33 LINK C LYS B 5 N MSE B 6 1555 1555 1.33 LINK C MSE B 6 N GLN B 7 1555 1555 1.33 LINK C GLU B 50 N AMSE B 51 1555 1555 1.33 LINK C GLU B 50 N BMSE B 51 1555 1555 1.32 LINK C AMSE B 51 N PRO B 52 1555 1555 1.35 LINK C BMSE B 51 N PRO B 52 1555 1555 1.35 LINK C TYR B 53 N AMSE B 54 1555 1555 1.33 LINK C TYR B 53 N BMSE B 54 1555 1555 1.34 LINK C AMSE B 54 N ASN B 55 1555 1555 1.33 LINK C BMSE B 54 N ASN B 55 1555 1555 1.32 LINK C LYS C 5 N MSE C 6 1555 1555 1.33 LINK C MSE C 6 N GLN C 7 1555 1555 1.33 LINK C GLU C 50 N AMSE C 51 1555 1555 1.33 LINK C GLU C 50 N BMSE C 51 1555 1555 1.33 LINK C AMSE C 51 N PRO C 52 1555 1555 1.35 LINK C BMSE C 51 N PRO C 52 1555 1555 1.34 LINK C TYR C 53 N AMSE C 54 1555 1555 1.33 LINK C TYR C 53 N BMSE C 54 1555 1555 1.33 LINK C AMSE C 54 N ASN C 55 1555 1555 1.33 LINK C BMSE C 54 N ASN C 55 1555 1555 1.33 LINK C MSE D 6 N GLN D 7 1555 1555 1.33 LINK C GLU D 50 N AMSE D 51 1555 1555 1.33 LINK C GLU D 50 N BMSE D 51 1555 1555 1.33 LINK C AMSE D 51 N PRO D 52 1555 1555 1.35 LINK C BMSE D 51 N PRO D 52 1555 1555 1.35 LINK C TYR D 53 N AMSE D 54 1555 1555 1.33 LINK C TYR D 53 N BMSE D 54 1555 1555 1.34 LINK C AMSE D 54 N ASN D 55 1555 1555 1.33 LINK C BMSE D 54 N ASN D 55 1555 1555 1.33 LINK OE2 GLU D 48 MG MG D 201 1555 1555 2.61 LINK MG MG D 201 O HOH D 335 1555 1555 2.10 LINK MG MG D 201 O HOH D 449 1555 1555 2.13 LINK MG MG D 201 O HOH D 317 1555 1555 2.30 LINK MG MG D 201 O HOH D 312 1555 1555 2.69 CISPEP 1 LEU A 110 PRO A 111 0 1.02 CISPEP 2 LEU B 110 PRO B 111 0 -3.93 CISPEP 3 LEU C 110 PRO C 111 0 -6.92 CISPEP 4 LEU D 110 PRO D 111 0 3.09 SITE 1 AC1 3 GLU A 133 GLU A 136 HOH A 400 SITE 1 AC2 8 VAL A 16 VAL A 17 THR A 18 HOH A 319 SITE 2 AC2 8 HOH A 343 HOH A 362 HOH A 382 LYS D 90 SITE 1 AC3 5 LYS A 62 LYS A 90 HOH A 341 HOH A 386 SITE 2 AC3 5 HOH A 415 SITE 1 AC4 3 THR A 42 GLU A 48 GLN A 86 SITE 1 AC5 2 GLY A 106 LYS B 33 SITE 1 AC6 3 ILE B 8 GLU B 124 GLN B 125 SITE 1 AC7 3 LYS B 118 ASP B 119 HOH B 348 SITE 1 AC8 4 PRO A 109 LYS B 62 HOH B 387 HOH B 427 SITE 1 AC9 4 LYS B 90 HOH B 385 VAL C 16 LYS C 24 SITE 1 BC1 3 GLU B 133 GLY B 137 LYS B 140 SITE 1 BC2 5 ASN B 14 PHE B 15 VAL B 16 LYS B 100 SITE 2 BC2 5 HOH B 419 SITE 1 BC3 6 LYS A 90 HOH A 323 GLN B 99 VAL B 107 SITE 2 BC3 6 GLY B 108 LEU B 110 SITE 1 BC4 9 HOH A 364 LYS B 118 PRO B 144 HOH B 322 SITE 2 BC4 9 HOH B 417 TYR C 61 LYS C 140 THR C 143 SITE 3 BC4 9 EDO C 202 SITE 1 BC5 10 LYS B 118 THR B 143 PRO B 144 HOH B 325 SITE 2 BC5 10 LYS C 60 TYR C 61 LYS C 64 LYS C 140 SITE 3 BC5 10 GOL C 201 HOH C 301 SITE 1 BC6 2 GLU C 21 LYS C 90 SITE 1 BC7 3 PRO C 59 LYS C 90 EDO C 205 SITE 1 BC8 4 PRO C 59 LYS C 62 GLU C 63 EDO C 204 SITE 1 BC9 2 LYS C 23 HOH C 340 SITE 1 CC1 6 LYS D 45 GLU D 48 HOH D 312 HOH D 317 SITE 2 CC1 6 HOH D 335 HOH D 449 SITE 1 CC2 3 LYS D 132 GLU D 133 HOH D 384 SITE 1 CC3 3 ILE D 8 GLN D 125 ILE D 127 SITE 1 CC4 6 GLU C 21 HOH C 321 HOH C 335 HOH C 380 SITE 2 CC4 6 GLN D 99 HOH D 405 SITE 1 CC5 4 VAL D 16 GLU D 56 LYS D 132 HOH D 364 SITE 1 CC6 5 PRO B 52 HOH B 304 HOH B 433 THR D 76 SITE 2 CC6 5 ILE D 78 CRYST1 36.816 55.166 62.570 92.27 90.09 89.99 P 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.027162 -0.000005 0.000043 0.00000 SCALE2 0.000000 0.018127 0.000719 0.00000 SCALE3 0.000000 0.000000 0.015995 0.00000