PDB Short entry for 4OI9 HEADER CELL ADHESION 19-JAN-14 4OI9 TITLE CRYSTAL STRUCTURE OF ICAM-5 D1-D4 ECTODOMAIN FRAGMENT, SPACE GROUP P21 COMPND MOL_ID: 1; COMPND 2 MOLECULE: INTERCELLULAR ADHESION MOLECULE 5; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: D1-D4; COMPND 5 SYNONYM: ICAM-5, TELENCEPHALIN; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ICAM5, TLCN, TLN; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606 KEYWDS CELL ADHESION, CELL SURFACE, NEURONS, IMMUNOGLOBULIN SUPERFAMILY, KEYWDS 2 INTERCELLULAR ADHESION MOLECULES, ICAM-5, TELENCEPHALIN EXPDTA X-RAY DIFFRACTION AUTHOR R.RECACHA,D.JIMENEZ,L.TIAN,R.BARREDO,C.GHAMBERG,J.M.CASASNOVAS REVDAT 2 29-JUL-20 4OI9 1 COMPND REMARK HETNAM LINK REVDAT 2 2 1 SITE ATOM REVDAT 1 16-JUL-14 4OI9 0 JRNL AUTH R.RECACHA,D.JIMENEZ,L.TIAN,R.BARREDO,C.G.GAHMBERG, JRNL AUTH 2 J.M.CASASNOVAS JRNL TITL CRYSTAL STRUCTURES OF AN ICAM-5 ECTODOMAIN FRAGMENT SHOW JRNL TITL 2 ELECTROSTATIC-BASED HOMOPHILIC ADHESIONS. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 70 1934 2014 JRNL REFN ISSN 0907-4449 JRNL PMID 25004970 JRNL DOI 10.1107/S1399004714009468 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.2_1309) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : TWIN_LSQ_F REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 22.42 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.250 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 20738 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.251 REMARK 3 R VALUE (WORKING SET) : 0.248 REMARK 3 FREE R VALUE : 0.263 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 11.740 REMARK 3 FREE R VALUE TEST SET COUNT : 2325 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.5835 - 6.7005 0.84 1873 229 0.2067 0.1993 REMARK 3 2 6.7005 - 5.3542 0.90 2001 226 0.2061 0.2360 REMARK 3 3 5.3542 - 4.6880 0.91 2022 193 0.1726 0.1838 REMARK 3 4 4.6880 - 4.2642 0.89 1970 240 0.1765 0.1931 REMARK 3 5 4.2642 - 3.9613 0.90 2015 230 0.2121 0.2175 REMARK 3 6 3.9613 - 3.7294 0.91 2064 201 0.2119 0.2400 REMARK 3 7 3.7294 - 3.5438 0.90 1957 222 0.2296 0.2589 REMARK 3 8 3.5438 - 3.3903 0.91 2053 209 0.2581 0.2896 REMARK 3 9 3.3903 - 3.2604 0.90 1987 223 0.2815 0.2697 REMARK 3 10 3.2604 - 3.1484 0.90 2009 218 0.2818 0.3236 REMARK 3 11 3.1484 - 3.0503 0.90 2008 222 0.3153 0.3252 REMARK 3 12 3.0503 - 2.9634 0.89 1971 224 0.3308 0.3542 REMARK 3 13 2.9634 - 2.8857 0.90 1992 217 0.3556 0.4127 REMARK 3 14 2.8857 - 2.8155 0.90 2012 225 0.3681 0.4056 REMARK 3 15 2.8155 - 2.7517 0.89 1984 249 0.3711 0.4087 REMARK 3 16 2.7517 - 2.6932 0.91 2047 205 0.3834 0.3508 REMARK 3 17 2.6932 - 2.6395 0.89 1952 232 0.4108 0.4615 REMARK 3 18 2.6395 - 2.5898 0.89 1987 234 0.4231 0.4249 REMARK 3 19 2.5898 - 2.5437 0.90 2006 235 0.4224 0.4832 REMARK 3 20 2.5437 - 2.5006 0.89 2000 242 0.4279 0.4624 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 33.490 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: 0.0300 REMARK 3 OPERATOR: H,-K,-L REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 3272 REMARK 3 ANGLE : 0.931 4401 REMARK 3 CHIRALITY : 0.058 522 REMARK 3 PLANARITY : 0.005 559 REMARK 3 DIHEDRAL : 23.282 1287 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN A AND RESID 1:85 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.2423 -3.2420 91.0249 REMARK 3 T TENSOR REMARK 3 T11: 0.3751 T22: 0.5895 REMARK 3 T33: 0.4639 T12: 0.0584 REMARK 3 T13: 0.0979 T23: 0.0804 REMARK 3 L TENSOR REMARK 3 L11: 9.1897 L22: 3.1669 REMARK 3 L33: 4.5353 L12: 1.9183 REMARK 3 L13: -3.3509 L23: -1.3209 REMARK 3 S TENSOR REMARK 3 S11: -0.0851 S12: 0.1793 S13: 0.0553 REMARK 3 S21: 0.1179 S22: 0.3028 S23: 0.5006 REMARK 3 S31: -0.1766 S32: -1.1629 S33: -0.2147 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN A AND RESID 86:194 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.5467 15.4228 62.9451 REMARK 3 T TENSOR REMARK 3 T11: 0.4982 T22: 0.4809 REMARK 3 T33: 0.4168 T12: 0.0221 REMARK 3 T13: 0.0448 T23: 0.1493 REMARK 3 L TENSOR REMARK 3 L11: 7.3825 L22: 2.5376 REMARK 3 L33: 9.6057 L12: 2.1461 REMARK 3 L13: -5.4778 L23: -3.4281 REMARK 3 S TENSOR REMARK 3 S11: -0.1664 S12: 0.6666 S13: 0.4893 REMARK 3 S21: -0.2520 S22: -0.0203 S23: -0.2088 REMARK 3 S31: -0.4237 S32: 0.0133 S33: 0.1532 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN A AND RESID 195:289 ) REMARK 3 ORIGIN FOR THE GROUP (A): 56.0088 20.0692 31.5361 REMARK 3 T TENSOR REMARK 3 T11: 0.7258 T22: 1.6318 REMARK 3 T33: 0.6804 T12: -0.2637 REMARK 3 T13: 0.0849 T23: 0.4143 REMARK 3 L TENSOR REMARK 3 L11: 2.5944 L22: 3.2679 REMARK 3 L33: 2.6951 L12: 0.2706 REMARK 3 L13: -0.6029 L23: 0.0719 REMARK 3 S TENSOR REMARK 3 S11: -0.2519 S12: 0.6442 S13: 0.0532 REMARK 3 S21: 0.1491 S22: 0.4877 S23: 0.0976 REMARK 3 S31: 0.2280 S32: -0.0172 S33: -0.1609 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: ( CHAIN A AND RESID 290:378 ) REMARK 3 ORIGIN FOR THE GROUP (A): 88.9849 22.8915 5.2396 REMARK 3 T TENSOR REMARK 3 T11: 0.6360 T22: 1.0766 REMARK 3 T33: 0.5662 T12: -0.3033 REMARK 3 T13: 0.1065 T23: -0.0759 REMARK 3 L TENSOR REMARK 3 L11: 2.2487 L22: 2.5307 REMARK 3 L33: 0.5323 L12: 0.5489 REMARK 3 L13: -0.3334 L23: -0.5125 REMARK 3 S TENSOR REMARK 3 S11: -0.1796 S12: 0.8483 S13: -0.6604 REMARK 3 S21: -0.2460 S22: 0.1540 S23: 0.1879 REMARK 3 S31: 0.4571 S32: -1.0938 S33: 0.0339 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4OI9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-JAN-14. REMARK 100 THE DEPOSITION ID IS D_1000084526. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JUL-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM16 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23117 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 22.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 44431.0 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.13100 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 67.33 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.77 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM TRIS-HCL 8.5, 10% PEG4000, PH REMARK 280 5.6, VAPOR DIFFUSION, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 23.45500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 263 CG CD OE1 NE2 REMARK 470 GLU A 264 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CB CYS A 24 SG CYS A 68 1.65 REMARK 500 SG CYS A 28 CB CYS A 72 1.69 REMARK 500 CB CYS A 28 SG CYS A 72 1.71 REMARK 500 CB CYS A 313 SG CYS A 352 1.73 REMARK 500 ND2 ASN A 106 C2 NAG A 2304 1.75 REMARK 500 SG CYS A 313 CB CYS A 352 1.93 REMARK 500 ND2 ASN A 183 C2 NAG C 1 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 43 -74.22 -114.81 REMARK 500 PRO A 89 68.68 -69.91 REMARK 500 SER A 241 77.03 -118.67 REMARK 500 ALA A 261 -2.88 86.34 REMARK 500 GLN A 263 -140.59 58.93 REMARK 500 GLN A 318 -65.62 -95.22 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4OIA RELATED DB: PDB REMARK 900 RELATED ID: 4OIB RELATED DB: PDB DBREF 4OI9 A 1 378 UNP Q9UMF0 ICAM5_HUMAN 32 409 SEQRES 1 A 378 GLU PRO PHE TRP ALA ASP LEU GLN PRO ARG VAL ALA PHE SEQRES 2 A 378 VAL GLU ARG GLY GLY SER LEU TRP LEU ASN CYS SER THR SEQRES 3 A 378 ASN CYS PRO ARG PRO GLU ARG GLY GLY LEU GLU THR SER SEQRES 4 A 378 LEU ARG ARG ASN GLY THR GLN ARG GLY LEU ARG TRP LEU SEQRES 5 A 378 ALA ARG GLN LEU VAL ASP ILE ARG GLU PRO GLU THR GLN SEQRES 6 A 378 PRO VAL CYS PHE PHE ARG CYS ALA ARG ARG THR LEU GLN SEQRES 7 A 378 ALA ARG GLY LEU ILE ARG THR PHE GLN ARG PRO ASP ARG SEQRES 8 A 378 VAL GLU LEU MET PRO LEU PRO PRO TRP GLN PRO VAL GLY SEQRES 9 A 378 GLU ASN PHE THR LEU SER CYS ARG VAL PRO GLY ALA GLY SEQRES 10 A 378 PRO ARG ALA SER LEU THR LEU THR LEU LEU ARG GLY ALA SEQRES 11 A 378 GLN GLU LEU ILE ARG ARG SER PHE ALA GLY GLU PRO PRO SEQRES 12 A 378 ARG ALA ARG GLY ALA VAL LEU THR ALA THR VAL LEU ALA SEQRES 13 A 378 ARG ARG GLU ASP HIS GLY ALA ASN PHE SER CYS ARG ALA SEQRES 14 A 378 GLU LEU ASP LEU ARG PRO HIS GLY LEU GLY LEU PHE GLU SEQRES 15 A 378 ASN SER SER ALA PRO ARG GLU LEU ARG THR PHE SER LEU SEQRES 16 A 378 SER PRO ASP ALA PRO ARG LEU ALA ALA PRO ARG LEU LEU SEQRES 17 A 378 GLU VAL GLY SER GLU ARG PRO VAL SER CYS THR LEU ASP SEQRES 18 A 378 GLY LEU PHE PRO ALA SER GLU ALA ARG VAL TYR LEU ALA SEQRES 19 A 378 LEU GLY ASP GLN ASN LEU SER PRO ASP VAL THR LEU GLU SEQRES 20 A 378 GLY ASP ALA PHE VAL ALA THR ALA THR ALA THR ALA SER SEQRES 21 A 378 ALA GLU GLN GLU GLY ALA ARG GLN LEU VAL CYS ASN VAL SEQRES 22 A 378 THR LEU GLY GLY GLU ASN ARG GLU THR ARG GLU ASN VAL SEQRES 23 A 378 THR ILE TYR SER PHE PRO ALA PRO LEU LEU THR LEU SER SEQRES 24 A 378 GLU PRO SER VAL SER GLU GLY GLN MET VAL THR VAL THR SEQRES 25 A 378 CYS ALA ALA GLY ALA GLN ALA LEU VAL THR LEU GLU GLY SEQRES 26 A 378 VAL PRO ALA ALA VAL PRO GLY GLN PRO ALA GLN LEU GLN SEQRES 27 A 378 LEU ASN ALA THR GLU ASN ASP ASP ARG ARG SER PHE PHE SEQRES 28 A 378 CYS ASP ALA THR LEU ASP VAL ASP GLY GLU THR LEU ILE SEQRES 29 A 378 LYS ASN ARG SER ALA GLU LEU ARG VAL LEU TYR ALA PRO SEQRES 30 A 378 ARG MODRES 4OI9 ASN A 43 ASN GLYCOSYLATION SITE MODRES 4OI9 ASN A 106 ASN GLYCOSYLATION SITE MODRES 4OI9 ASN A 285 ASN GLYCOSYLATION SITE MODRES 4OI9 ASN A 164 ASN GLYCOSYLATION SITE MODRES 4OI9 ASN A 340 ASN GLYCOSYLATION SITE MODRES 4OI9 ASN A 23 ASN GLYCOSYLATION SITE MODRES 4OI9 ASN A 183 ASN GLYCOSYLATION SITE MODRES 4OI9 ASN A 272 ASN GLYCOSYLATION SITE MODRES 4OI9 ASN A 366 ASN GLYCOSYLATION SITE HET NAG B 1 14 HET NAG B 2 14 HET NAG C 1 14 HET NAG C 2 14 HET NAG D 1 14 HET NAG D 2 14 HET BMA D 3 11 HET MAN D 4 11 HET NAG E 1 14 HET NAG E 2 14 HET NAG A2303 14 HET NAG A2304 14 HET NAG A2305 14 HET NAG A2312 14 HET NAG A2315 14 HET EDO A2316 4 HET EDO A2317 4 HET EDO A2318 4 HET EDO A2319 4 HET EDO A2320 4 HET EDO A2321 4 HET EDO A2322 4 HET EDO A2323 4 HET EDO A2324 4 HET EDO A2325 4 HET EDO A2326 4 HET EDO A2327 4 HET EDO A2328 4 HET EDO A2329 4 HET EDO A2330 4 HET EDO A2331 4 HET EDO A2332 4 HET EDO A2333 4 HET EDO A2334 4 HET EDO A2335 4 HET EDO A2336 4 HET EDO A2337 4 HET EDO A2338 4 HET EDO A2339 4 HET EDO A2340 4 HET EDO A2341 4 HET EDO A2342 4 HET EDO A2343 4 HET EDO A2344 4 HET EDO A2345 4 HET EDO A2346 4 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 2 NAG 13(C8 H15 N O6) FORMUL 4 BMA C6 H12 O6 FORMUL 4 MAN C6 H12 O6 FORMUL 11 EDO 31(C2 H6 O2) FORMUL 42 HOH *97(H2 O) HELIX 1 1 PRO A 118 ALA A 120 5 3 HELIX 2 2 ARG A 157 HIS A 161 5 5 HELIX 3 3 ARG A 174 GLY A 177 5 4 HELIX 4 4 PRO A 225 ALA A 229 5 5 HELIX 5 5 THR A 342 ASP A 346 5 5 SHEET 1 A 4 ALA A 5 GLN A 8 0 SHEET 2 A 4 GLY A 18 THR A 26 -1 O ASN A 23 N GLN A 8 SHEET 3 A 4 TRP A 51 ILE A 59 -1 O ARG A 54 N LEU A 22 SHEET 4 A 4 ARG A 41 ARG A 47 -1 N GLN A 46 O ALA A 53 SHEET 1 B 3 VAL A 11 GLU A 15 0 SHEET 2 B 3 LEU A 82 PHE A 86 1 O ARG A 84 N ALA A 12 SHEET 3 B 3 GLU A 63 THR A 64 -1 N THR A 64 O ILE A 83 SHEET 1 C 3 PRO A 31 GLU A 37 0 SHEET 2 C 3 VAL A 67 CYS A 72 -1 O ARG A 71 N GLU A 32 SHEET 3 C 3 ARG A 75 ARG A 80 -1 O LEU A 77 N PHE A 70 SHEET 1 D 3 GLU A 93 LEU A 94 0 SHEET 2 D 3 ASN A 106 VAL A 113 -1 O ARG A 112 N GLU A 93 SHEET 3 D 3 ALA A 148 LEU A 155 -1 O LEU A 150 N CYS A 111 SHEET 1 E 3 GLN A 101 PRO A 102 0 SHEET 2 E 3 THR A 192 LEU A 195 1 O PHE A 193 N GLN A 101 SHEET 3 E 3 LEU A 223 PHE A 224 -1 O PHE A 224 N SER A 194 SHEET 1 F 4 GLN A 131 SER A 137 0 SHEET 2 F 4 LEU A 122 ARG A 128 -1 N LEU A 124 O ARG A 136 SHEET 3 F 4 PHE A 165 ASP A 172 -1 O SER A 166 N LEU A 127 SHEET 4 F 4 LEU A 180 SER A 184 -1 O PHE A 181 N LEU A 171 SHEET 1 G 4 ARG A 201 ALA A 203 0 SHEET 2 G 4 ARG A 214 LEU A 220 -1 O SER A 217 N ALA A 203 SHEET 3 G 4 ALA A 250 ALA A 257 -1 O ALA A 253 N CYS A 218 SHEET 4 G 4 ASP A 243 GLU A 247 -1 N GLU A 247 O ALA A 250 SHEET 1 H 5 LEU A 207 GLU A 209 0 SHEET 2 H 5 GLU A 278 TYR A 289 1 O THR A 287 N LEU A 208 SHEET 3 H 5 GLY A 265 LEU A 275 -1 N GLY A 265 O ILE A 288 SHEET 4 H 5 ARG A 230 LEU A 235 -1 N TYR A 232 O ASN A 272 SHEET 5 H 5 ASN A 239 LEU A 240 -1 O LEU A 240 N LEU A 233 SHEET 1 I 3 LEU A 295 LEU A 298 0 SHEET 2 I 3 MET A 308 ALA A 314 -1 O ALA A 314 N LEU A 295 SHEET 3 I 3 ALA A 335 ASN A 340 -1 O LEU A 339 N VAL A 309 SHEET 1 J 5 SER A 302 SER A 304 0 SHEET 2 J 5 GLU A 361 LEU A 374 1 O ARG A 372 N VAL A 303 SHEET 3 J 5 ARG A 348 VAL A 358 -1 N LEU A 356 O LEU A 363 SHEET 4 J 5 LEU A 320 LEU A 323 -1 N THR A 322 O ASP A 353 SHEET 5 J 5 VAL A 326 PRO A 327 -1 O VAL A 326 N LEU A 323 SSBOND 1 CYS A 24 CYS A 68 1555 1555 2.02 SSBOND 2 CYS A 28 CYS A 72 1555 1555 2.02 SSBOND 3 CYS A 111 CYS A 167 1555 1555 2.03 SSBOND 4 CYS A 218 CYS A 271 1555 1555 2.04 SSBOND 5 CYS A 313 CYS A 352 1555 1555 2.00 LINK ND2 ASN A 23 C1 NAG B 1 1555 1555 1.44 LINK ND2 ASN A 43 C1 NAG A2303 1555 1555 1.43 LINK ND2 ASN A 106 C1 NAG A2304 1555 1555 1.44 LINK ND2 ASN A 164 C1 NAG A2305 1555 1555 1.44 LINK ND2 ASN A 183 C1 NAG C 1 1555 1555 1.44 LINK ND2 ASN A 272 C1 NAG E 1 1555 1555 1.44 LINK ND2 ASN A 285 C1 NAG D 1 1555 1555 1.44 LINK ND2 ASN A 340 C1 NAG A2312 1555 1555 1.44 LINK ND2 ASN A 366 C1 NAG A2315 1555 1555 1.45 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.44 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.44 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.44 LINK O4 NAG D 2 C1 BMA D 3 1555 1555 1.44 LINK O3 BMA D 3 C1 MAN D 4 1555 1555 1.44 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.45 CISPEP 1 GLN A 8 PRO A 9 0 -6.56 CISPEP 2 GLY A 117 PRO A 118 0 -2.69 CISPEP 3 PHE A 224 PRO A 225 0 -19.56 CISPEP 4 GLN A 263 GLU A 264 0 -5.49 CISPEP 5 ALA A 329 VAL A 330 0 0.05 CRYST1 76.590 46.910 95.790 90.00 104.34 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013057 0.000000 0.003338 0.00000 SCALE2 0.000000 0.021317 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010775 0.00000