PDB Short entry for 4P42 HEADER LIPID TRANSPORT 10-MAR-14 4P42 TITLE EXTENDED-SYNAPTOTAGMIN 2, SMP - C2A - C2B DOMAINS COMPND MOL_ID: 1; COMPND 2 MOLECULE: EXTENDED SYNAPTOTAGMIN-2; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: SMP-C2A-C2B DOMAINS (UNP RESIDUES 191-662); COMPND 5 SYNONYM: E-SYT2, CHR2SYT; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ESYT2, FAM62B, KIAA1228; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 83333; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: K-12; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS ENDOCYTOSIS, SIGNAL TRANSDUCTION, MEMBRANE CONTACT SITE, LIPID KEYWDS 2 BINDING, LIPID TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR C.M.SCHAUDER,X.WU,K.M.REINISCH REVDAT 4 27-DEC-23 4P42 1 COMPND SOURCE KEYWDS JRNL REVDAT 4 2 1 REMARK HETNAM HETSYN FORMUL REVDAT 4 3 1 CRYST1 ATOM REVDAT 3 16-JUL-14 4P42 1 JRNL REVDAT 2 18-JUN-14 4P42 1 JRNL REVDAT 1 14-MAY-14 4P42 0 JRNL AUTH C.M.SCHAUDER,X.WU,Y.SAHEKI,P.NARAYANASWAMY,F.TORTA,M.R.WENK, JRNL AUTH 2 P.DE CAMILLI,K.M.REINISCH JRNL TITL STRUCTURE OF A LIPID-BOUND EXTENDED SYNAPTOTAGMIN INDICATES JRNL TITL 2 A ROLE IN LIPID TRANSFER. JRNL REF NATURE V. 510 552 2014 JRNL REFN ESSN 1476-4687 JRNL PMID 24847877 JRNL DOI 10.1038/NATURE13269 REMARK 2 REMARK 2 RESOLUTION. 2.44 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: DEV_1452) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.44 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.14 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 21.800 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 41769 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.212 REMARK 3 R VALUE (WORKING SET) : 0.210 REMARK 3 FREE R VALUE : 0.256 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.790 REMARK 3 FREE R VALUE TEST SET COUNT : 2000 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.1496 - 5.8752 1.00 3038 153 0.1863 0.1895 REMARK 3 2 5.8752 - 4.6646 1.00 2888 146 0.1625 0.2128 REMARK 3 3 4.6646 - 4.0754 1.00 2877 144 0.1563 0.1995 REMARK 3 4 4.0754 - 3.7029 1.00 2842 143 0.1934 0.2467 REMARK 3 5 3.7029 - 3.4376 1.00 2846 142 0.2169 0.2652 REMARK 3 6 3.4376 - 3.2350 1.00 2828 144 0.2372 0.3059 REMARK 3 7 3.2350 - 3.0730 1.00 2830 142 0.2531 0.2758 REMARK 3 8 3.0730 - 2.9392 1.00 2809 141 0.2616 0.3232 REMARK 3 9 2.9392 - 2.8261 1.00 2802 141 0.2585 0.3173 REMARK 3 10 2.8261 - 2.7286 1.00 2820 141 0.2636 0.3290 REMARK 3 11 2.7286 - 2.6433 1.00 2797 141 0.2660 0.3301 REMARK 3 12 2.6433 - 2.5677 1.00 2787 140 0.2664 0.3342 REMARK 3 13 2.5677 - 2.5001 1.00 2810 142 0.2715 0.3344 REMARK 3 14 2.5001 - 2.4400 1.00 2795 140 0.2830 0.3147 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.350 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.950 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 7421 REMARK 3 ANGLE : 0.846 10025 REMARK 3 CHIRALITY : 0.031 1141 REMARK 3 PLANARITY : 0.003 1260 REMARK 3 DIHEDRAL : 14.186 2886 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 163 THROUGH 311 ) REMARK 3 ORIGIN FOR THE GROUP (A): -64.2322 -72.2108 17.7065 REMARK 3 T TENSOR REMARK 3 T11: 0.3232 T22: 0.4054 REMARK 3 T33: 0.3211 T12: -0.0314 REMARK 3 T13: -0.0105 T23: -0.0031 REMARK 3 L TENSOR REMARK 3 L11: 0.5172 L22: 4.6294 REMARK 3 L33: 1.6548 L12: 0.2533 REMARK 3 L13: -0.1440 L23: -1.3989 REMARK 3 S TENSOR REMARK 3 S11: 0.0615 S12: 0.1430 S13: 0.0041 REMARK 3 S21: -0.3783 S22: 0.0492 S23: 0.0115 REMARK 3 S31: 0.0135 S32: 0.0626 S33: -0.0733 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 312 THROUGH 507) REMARK 3 ORIGIN FOR THE GROUP (A):-100.5180 -91.1295 44.9088 REMARK 3 T TENSOR REMARK 3 T11: 0.3257 T22: 0.3480 REMARK 3 T33: 0.3072 T12: 0.0378 REMARK 3 T13: -0.0186 T23: 0.0177 REMARK 3 L TENSOR REMARK 3 L11: 1.5703 L22: 1.0059 REMARK 3 L33: 0.9171 L12: 0.9199 REMARK 3 L13: -0.5867 L23: -0.2874 REMARK 3 S TENSOR REMARK 3 S11: 0.0868 S12: -0.0241 S13: -0.0096 REMARK 3 S21: 0.1361 S22: -0.0737 S23: 0.0805 REMARK 3 S31: 0.0719 S32: -0.1957 S33: -0.0385 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 508 THROUGH 630 ) REMARK 3 ORIGIN FOR THE GROUP (A): -80.9004 -83.8101 57.1123 REMARK 3 T TENSOR REMARK 3 T11: 0.4393 T22: 0.3702 REMARK 3 T33: 0.2954 T12: -0.0672 REMARK 3 T13: 0.0292 T23: -0.0491 REMARK 3 L TENSOR REMARK 3 L11: 5.1283 L22: 2.8127 REMARK 3 L33: 2.4799 L12: -1.1662 REMARK 3 L13: 1.5377 L23: 0.0049 REMARK 3 S TENSOR REMARK 3 S11: 0.0540 S12: 0.0249 S13: 0.1574 REMARK 3 S21: -0.1121 S22: -0.1039 S23: -0.2305 REMARK 3 S31: -0.2839 S32: 0.2924 S33: 0.0601 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 164 THROUGH 331 ) REMARK 3 ORIGIN FOR THE GROUP (A): -81.0253-102.5404 32.5641 REMARK 3 T TENSOR REMARK 3 T11: 0.3870 T22: 0.3135 REMARK 3 T33: 0.3364 T12: 0.0145 REMARK 3 T13: -0.0611 T23: -0.0343 REMARK 3 L TENSOR REMARK 3 L11: 3.1118 L22: 1.6951 REMARK 3 L33: 2.8163 L12: 1.3354 REMARK 3 L13: -1.9489 L23: -1.0547 REMARK 3 S TENSOR REMARK 3 S11: -0.1197 S12: 0.1837 S13: -0.1266 REMARK 3 S21: -0.0836 S22: 0.0806 S23: -0.0831 REMARK 3 S31: 0.0634 S32: -0.0691 S33: 0.0578 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 332 THROUGH 424 ) REMARK 3 ORIGIN FOR THE GROUP (A): -91.9379-109.8780 10.8495 REMARK 3 T TENSOR REMARK 3 T11: 0.3582 T22: 0.4013 REMARK 3 T33: 0.4125 T12: 0.1569 REMARK 3 T13: -0.0660 T23: -0.0573 REMARK 3 L TENSOR REMARK 3 L11: 5.4547 L22: 1.0401 REMARK 3 L33: 3.0007 L12: -0.2108 REMARK 3 L13: 1.2004 L23: -0.4326 REMARK 3 S TENSOR REMARK 3 S11: 0.3116 S12: 0.5253 S13: -0.5710 REMARK 3 S21: -0.4532 S22: -0.1567 S23: 0.1848 REMARK 3 S31: 0.0762 S32: 0.1242 S33: 0.0144 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 425 THROUGH 492 ) REMARK 3 ORIGIN FOR THE GROUP (A): -87.9265-111.7920 4.7066 REMARK 3 T TENSOR REMARK 3 T11: 0.4161 T22: 0.5913 REMARK 3 T33: 0.3797 T12: 0.1420 REMARK 3 T13: -0.0263 T23: -0.0488 REMARK 3 L TENSOR REMARK 3 L11: 4.4124 L22: 7.1649 REMARK 3 L33: 2.5312 L12: -4.6409 REMARK 3 L13: 1.6484 L23: -2.6706 REMARK 3 S TENSOR REMARK 3 S11: 0.6102 S12: 0.7535 S13: -0.0864 REMARK 3 S21: -0.5901 S22: -0.7054 S23: -0.3650 REMARK 3 S31: 0.5399 S32: 0.6666 S33: 0.0276 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 493 THROUGH 544 ) REMARK 3 ORIGIN FOR THE GROUP (A):-110.6455 -94.8852 19.6595 REMARK 3 T TENSOR REMARK 3 T11: 0.2483 T22: 0.2960 REMARK 3 T33: 0.3268 T12: 0.0333 REMARK 3 T13: -0.0336 T23: 0.0366 REMARK 3 L TENSOR REMARK 3 L11: 5.7588 L22: 1.9841 REMARK 3 L33: 6.5736 L12: -1.0973 REMARK 3 L13: -4.1882 L23: 0.7829 REMARK 3 S TENSOR REMARK 3 S11: 0.0225 S12: 0.0845 S13: -0.0144 REMARK 3 S21: -0.0007 S22: -0.1669 S23: 0.0615 REMARK 3 S31: 0.1477 S32: -0.2702 S33: 0.1497 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 545 THROUGH 630 ) REMARK 3 ORIGIN FOR THE GROUP (A):-109.9061 -91.5021 16.7047 REMARK 3 T TENSOR REMARK 3 T11: 0.3030 T22: 0.3277 REMARK 3 T33: 0.2893 T12: 0.0327 REMARK 3 T13: -0.0180 T23: 0.0492 REMARK 3 L TENSOR REMARK 3 L11: 4.4285 L22: 1.8170 REMARK 3 L33: 4.2152 L12: -1.3707 REMARK 3 L13: -2.4345 L23: 1.5220 REMARK 3 S TENSOR REMARK 3 S11: 0.0966 S12: 0.2907 S13: 0.1153 REMARK 3 S21: -0.1184 S22: -0.1862 S23: -0.0231 REMARK 3 S31: -0.0462 S32: -0.2919 S33: 0.0985 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4P42 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-MAR-14. REMARK 100 THE DEPOSITION ID IS D_1000200312. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-AUG-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792, 1.907 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 41769 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.440 REMARK 200 RESOLUTION RANGE LOW (A) : 47.140 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 6.300 REMARK 200 R MERGE (I) : 0.08900 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 2.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.43 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.53 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 1500, MIB BUFFER, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 37.16600 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 83.59500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 44.19100 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 83.59500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 37.16600 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 44.19100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10890 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 41480 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -94.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 161 REMARK 465 SER A 162 REMARK 465 LYS A 495 REMARK 465 ALA A 496 REMARK 465 ASP A 497 REMARK 465 LYS A 498 REMARK 465 ASP A 499 REMARK 465 GLN A 500 REMARK 465 ALA A 501 REMARK 465 ASN A 502 REMARK 465 ASP A 503 REMARK 465 GLY A 523 REMARK 465 LYS A 524 REMARK 465 LYS A 525 REMARK 465 ILE A 526 REMARK 465 LYS A 631 REMARK 465 ARG A 632 REMARK 465 GLU A 633 REMARK 465 ARG A 634 REMARK 465 GLY B 161 REMARK 465 SER B 162 REMARK 465 ASP B 163 REMARK 465 GLU B 229 REMARK 465 ASN B 230 REMARK 465 VAL B 231 REMARK 465 ASP B 232 REMARK 465 GLU B 344 REMARK 465 VAL B 345 REMARK 465 GLN B 346 REMARK 465 ILE B 347 REMARK 465 ALA B 348 REMARK 465 GLN B 349 REMARK 465 LEU B 350 REMARK 465 GLN B 370 REMARK 465 GLY B 371 REMARK 465 LYS B 372 REMARK 465 ASP B 373 REMARK 465 THR B 374 REMARK 465 TYR B 375 REMARK 465 LEU B 376 REMARK 465 LYS B 377 REMARK 465 GLY B 378 REMARK 465 LEU B 379 REMARK 465 VAL B 380 REMARK 465 LYS B 381 REMARK 465 GLY B 382 REMARK 465 LYS B 383 REMARK 465 SER B 384 REMARK 465 ASP B 385 REMARK 465 ASP B 436 REMARK 465 LYS B 437 REMARK 465 ASP B 497 REMARK 465 LYS B 498 REMARK 465 ASP B 499 REMARK 465 GLN B 500 REMARK 465 ALA B 501 REMARK 465 ASN B 502 REMARK 465 ASP B 503 REMARK 465 LYS B 631 REMARK 465 ARG B 632 REMARK 465 GLU B 633 REMARK 465 ARG B 634 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 830 O HOH B 869 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 192 -52.40 -126.76 REMARK 500 LEU A 285 -24.81 70.33 REMARK 500 PHE A 352 65.08 -158.59 REMARK 500 ILE A 364 -77.79 -81.15 REMARK 500 THR A 374 -24.59 67.24 REMARK 500 LEU A 376 17.36 54.40 REMARK 500 TYR A 419 -147.92 -95.04 REMARK 500 ASP A 436 -110.73 -89.50 REMARK 500 ARG A 455 -54.01 65.25 REMARK 500 ASP A 515 -71.62 -78.47 REMARK 500 ASP A 600 15.31 55.88 REMARK 500 SER A 612 -150.47 -135.87 REMARK 500 THR B 192 -51.66 -126.94 REMARK 500 LEU B 285 -23.26 71.15 REMARK 500 ARG B 295 -129.75 49.33 REMARK 500 ILE B 364 -76.75 -82.15 REMARK 500 GLN B 367 -91.14 -139.30 REMARK 500 SER B 407 61.15 68.73 REMARK 500 ARG B 455 -50.72 -2.67 REMARK 500 ASP B 515 -71.32 -78.94 REMARK 500 ASP B 600 14.64 56.42 REMARK 500 SER B 612 -152.25 -135.87 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 EGC A 701 REMARK 610 PEE A 702 REMARK 610 EGC B 701 REMARK 610 PEE B 702 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EGC A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEE A 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EGC B 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEE B 702 DBREF 4P42 A 163 634 UNP A0FGR8 ESYT2_HUMAN 191 662 DBREF 4P42 B 163 634 UNP A0FGR8 ESYT2_HUMAN 191 662 SEQADV 4P42 GLY A 161 UNP A0FGR8 EXPRESSION TAG SEQADV 4P42 SER A 162 UNP A0FGR8 EXPRESSION TAG SEQADV 4P42 GLY B 161 UNP A0FGR8 EXPRESSION TAG SEQADV 4P42 SER B 162 UNP A0FGR8 EXPRESSION TAG SEQRES 1 A 474 GLY SER ASP THR GLU ARG ALA GLU TRP LEU ASN LYS THR SEQRES 2 A 474 VAL LYS HIS MET TRP PRO PHE ILE CYS GLN PHE ILE GLU SEQRES 3 A 474 LYS LEU PHE ARG GLU THR ILE GLU PRO ALA VAL ARG GLY SEQRES 4 A 474 ALA ASN THR HIS LEU SER THR PHE SER PHE THR LYS VAL SEQRES 5 A 474 ASP VAL GLY GLN GLN PRO LEU ARG ILE ASN GLY VAL LYS SEQRES 6 A 474 VAL TYR THR GLU ASN VAL ASP LYS ARG GLN ILE ILE LEU SEQRES 7 A 474 ASP LEU GLN ILE SER PHE VAL GLY ASN CYS GLU ILE ASP SEQRES 8 A 474 LEU GLU ILE LYS ARG TYR PHE CYS ARG ALA GLY VAL LYS SEQRES 9 A 474 SER ILE GLN ILE HIS GLY THR MET ARG VAL ILE LEU GLU SEQRES 10 A 474 PRO LEU ILE GLY ASP MET PRO LEU VAL GLY ALA LEU SER SEQRES 11 A 474 ILE PHE PHE LEU ARG LYS PRO LEU LEU GLU ILE ASN TRP SEQRES 12 A 474 THR GLY LEU THR ASN LEU LEU ASP VAL PRO GLY LEU ASN SEQRES 13 A 474 GLY LEU SER ASP THR ILE ILE LEU ASP ILE ILE SER ASN SEQRES 14 A 474 TYR LEU VAL LEU PRO ASN ARG ILE THR VAL PRO LEU VAL SEQRES 15 A 474 SER GLU VAL GLN ILE ALA GLN LEU ARG PHE PRO VAL PRO SEQRES 16 A 474 LYS GLY VAL LEU ARG ILE HIS PHE ILE GLU ALA GLN ASP SEQRES 17 A 474 LEU GLN GLY LYS ASP THR TYR LEU LYS GLY LEU VAL LYS SEQRES 18 A 474 GLY LYS SER ASP PRO TYR GLY ILE ILE ARG VAL GLY ASN SEQRES 19 A 474 GLN ILE PHE GLN SER ARG VAL ILE LYS GLU ASN LEU SER SEQRES 20 A 474 PRO LYS TRP ASN GLU VAL TYR GLU ALA LEU VAL TYR GLU SEQRES 21 A 474 HIS PRO GLY GLN GLU LEU GLU ILE GLU LEU PHE ASP GLU SEQRES 22 A 474 ASP PRO ASP LYS ASP ASP PHE LEU GLY SER LEU MET ILE SEQRES 23 A 474 ASP LEU ILE GLU VAL GLU LYS GLU ARG LEU LEU ASP GLU SEQRES 24 A 474 TRP PHE THR LEU ASP GLU VAL PRO LYS GLY LYS LEU HIS SEQRES 25 A 474 LEU ARG LEU GLU TRP LEU THR LEU MET PRO ASN ALA SER SEQRES 26 A 474 ASN LEU ASP LYS VAL LEU THR ASP ILE LYS ALA ASP LYS SEQRES 27 A 474 ASP GLN ALA ASN ASP GLY LEU SER SER ALA LEU LEU ILE SEQRES 28 A 474 LEU TYR LEU ASP SER ALA ARG ASN LEU PRO SER GLY LYS SEQRES 29 A 474 LYS ILE SER SER ASN PRO ASN PRO VAL VAL GLN MET SER SEQRES 30 A 474 VAL GLY HIS LYS ALA GLN GLU SER LYS ILE ARG TYR LYS SEQRES 31 A 474 THR ASN GLU PRO VAL TRP GLU GLU ASN PHE THR PHE PHE SEQRES 32 A 474 ILE HIS ASN PRO LYS ARG GLN ASP LEU GLU VAL GLU VAL SEQRES 33 A 474 ARG ASP GLU GLN HIS GLN CYS SER LEU GLY ASN LEU LYS SEQRES 34 A 474 VAL PRO LEU SER GLN LEU LEU THR SER GLU ASP MET THR SEQRES 35 A 474 VAL SER GLN ARG PHE GLN LEU SER ASN SER GLY PRO ASN SEQRES 36 A 474 SER THR ILE LYS MET LYS ILE ALA LEU ARG VAL LEU HIS SEQRES 37 A 474 LEU GLU LYS ARG GLU ARG SEQRES 1 B 474 GLY SER ASP THR GLU ARG ALA GLU TRP LEU ASN LYS THR SEQRES 2 B 474 VAL LYS HIS MET TRP PRO PHE ILE CYS GLN PHE ILE GLU SEQRES 3 B 474 LYS LEU PHE ARG GLU THR ILE GLU PRO ALA VAL ARG GLY SEQRES 4 B 474 ALA ASN THR HIS LEU SER THR PHE SER PHE THR LYS VAL SEQRES 5 B 474 ASP VAL GLY GLN GLN PRO LEU ARG ILE ASN GLY VAL LYS SEQRES 6 B 474 VAL TYR THR GLU ASN VAL ASP LYS ARG GLN ILE ILE LEU SEQRES 7 B 474 ASP LEU GLN ILE SER PHE VAL GLY ASN CYS GLU ILE ASP SEQRES 8 B 474 LEU GLU ILE LYS ARG TYR PHE CYS ARG ALA GLY VAL LYS SEQRES 9 B 474 SER ILE GLN ILE HIS GLY THR MET ARG VAL ILE LEU GLU SEQRES 10 B 474 PRO LEU ILE GLY ASP MET PRO LEU VAL GLY ALA LEU SER SEQRES 11 B 474 ILE PHE PHE LEU ARG LYS PRO LEU LEU GLU ILE ASN TRP SEQRES 12 B 474 THR GLY LEU THR ASN LEU LEU ASP VAL PRO GLY LEU ASN SEQRES 13 B 474 GLY LEU SER ASP THR ILE ILE LEU ASP ILE ILE SER ASN SEQRES 14 B 474 TYR LEU VAL LEU PRO ASN ARG ILE THR VAL PRO LEU VAL SEQRES 15 B 474 SER GLU VAL GLN ILE ALA GLN LEU ARG PHE PRO VAL PRO SEQRES 16 B 474 LYS GLY VAL LEU ARG ILE HIS PHE ILE GLU ALA GLN ASP SEQRES 17 B 474 LEU GLN GLY LYS ASP THR TYR LEU LYS GLY LEU VAL LYS SEQRES 18 B 474 GLY LYS SER ASP PRO TYR GLY ILE ILE ARG VAL GLY ASN SEQRES 19 B 474 GLN ILE PHE GLN SER ARG VAL ILE LYS GLU ASN LEU SER SEQRES 20 B 474 PRO LYS TRP ASN GLU VAL TYR GLU ALA LEU VAL TYR GLU SEQRES 21 B 474 HIS PRO GLY GLN GLU LEU GLU ILE GLU LEU PHE ASP GLU SEQRES 22 B 474 ASP PRO ASP LYS ASP ASP PHE LEU GLY SER LEU MET ILE SEQRES 23 B 474 ASP LEU ILE GLU VAL GLU LYS GLU ARG LEU LEU ASP GLU SEQRES 24 B 474 TRP PHE THR LEU ASP GLU VAL PRO LYS GLY LYS LEU HIS SEQRES 25 B 474 LEU ARG LEU GLU TRP LEU THR LEU MET PRO ASN ALA SER SEQRES 26 B 474 ASN LEU ASP LYS VAL LEU THR ASP ILE LYS ALA ASP LYS SEQRES 27 B 474 ASP GLN ALA ASN ASP GLY LEU SER SER ALA LEU LEU ILE SEQRES 28 B 474 LEU TYR LEU ASP SER ALA ARG ASN LEU PRO SER GLY LYS SEQRES 29 B 474 LYS ILE SER SER ASN PRO ASN PRO VAL VAL GLN MET SER SEQRES 30 B 474 VAL GLY HIS LYS ALA GLN GLU SER LYS ILE ARG TYR LYS SEQRES 31 B 474 THR ASN GLU PRO VAL TRP GLU GLU ASN PHE THR PHE PHE SEQRES 32 B 474 ILE HIS ASN PRO LYS ARG GLN ASP LEU GLU VAL GLU VAL SEQRES 33 B 474 ARG ASP GLU GLN HIS GLN CYS SER LEU GLY ASN LEU LYS SEQRES 34 B 474 VAL PRO LEU SER GLN LEU LEU THR SER GLU ASP MET THR SEQRES 35 B 474 VAL SER GLN ARG PHE GLN LEU SER ASN SER GLY PRO ASN SEQRES 36 B 474 SER THR ILE LYS MET LYS ILE ALA LEU ARG VAL LEU HIS SEQRES 37 B 474 LEU GLU LYS ARG GLU ARG HET EGC A 701 29 HET PEE A 702 42 HET EGC B 701 25 HET PEE B 702 42 HETNAM EGC 2-(2-{2-[2-(2-{2-[2-(2-{2-[4-(1,1,3,3-TETRAMETHYL- HETNAM 2 EGC BUTYL)-PHENOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}- HETNAM 3 EGC ETHOXY)-ETHOXY]-ETHOX Y}-ETHOXY)-ETHANOL HETNAM PEE 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE HETSYN EGC TRITON X-100 HETSYN PEE DOPE FORMUL 3 EGC 2(C32 H58 O10) FORMUL 4 PEE 2(C41 H78 N O8 P) FORMUL 7 HOH *212(H2 O) HELIX 1 AA1 ALA A 167 THR A 192 1 26 HELIX 2 AA2 THR A 192 GLY A 199 1 8 HELIX 3 AA3 ASN A 201 SER A 205 5 5 HELIX 4 AA4 GLY A 305 LEU A 310 1 6 HELIX 5 AA5 SER A 319 LEU A 331 1 13 HELIX 6 AA6 SER A 343 PHE A 352 1 10 HELIX 7 AA7 LEU A 448 ARG A 455 1 8 HELIX 8 AA8 ASN A 486 ILE A 494 1 9 HELIX 9 AA9 LEU A 592 THR A 597 1 6 HELIX 10 AB1 SER A 598 ASP A 600 5 3 HELIX 11 AB2 ALA B 167 THR B 192 1 26 HELIX 12 AB3 THR B 192 GLY B 199 1 8 HELIX 13 AB4 ASN B 201 SER B 205 5 5 HELIX 14 AB5 ARG B 256 PHE B 258 5 3 HELIX 15 AB6 GLY B 305 ASP B 311 1 7 HELIX 16 AB7 SER B 319 LEU B 331 1 13 HELIX 17 AB8 LEU B 448 GLU B 454 1 7 HELIX 18 AB9 ASN B 486 ALA B 496 1 11 HELIX 19 AC1 LEU B 592 THR B 597 1 6 HELIX 20 AC2 SER B 598 ASP B 600 5 3 SHEET 1 AA1 4 PHE A 207 ASP A 213 0 SHEET 2 AA1 4 ILE A 236 ILE A 254 -1 O GLU A 249 N ASP A 213 SHEET 3 AA1 4 CYS A 259 LEU A 276 -1 O ALA A 261 N LEU A 252 SHEET 4 AA1 4 LEU A 298 THR A 304 -1 O LEU A 298 N HIS A 269 SHEET 1 AA2 5 ARG A 220 TYR A 227 0 SHEET 2 AA2 5 ILE A 236 ILE A 254 -1 O GLN A 241 N ASN A 222 SHEET 3 AA2 5 CYS A 259 LEU A 276 -1 O ALA A 261 N LEU A 252 SHEET 4 AA2 5 ALA A 288 PHE A 293 -1 O PHE A 292 N ARG A 273 SHEET 5 AA2 5 ILE A 337 PRO A 340 -1 O ILE A 337 N ILE A 291 SHEET 1 AA3 6 LYS A 409 VAL A 418 0 SHEET 2 AA3 6 GLY A 357 GLN A 370 -1 N ILE A 361 O TYR A 414 SHEET 3 AA3 6 LYS A 468 MET A 481 -1 O LEU A 478 N VAL A 358 SHEET 4 AA3 6 THR A 617 LEU A 629 -1 O HIS A 628 N THR A 479 SHEET 5 AA3 6 ALA A 508 ARG A 518 -1 N LEU A 509 O ARG A 625 SHEET 6 AA3 6 VAL A 555 ILE A 564 -1 O PHE A 560 N LEU A 512 SHEET 1 AA4 4 LEU A 456 THR A 462 0 SHEET 2 AA4 4 LYS A 468 MET A 481 -1 O LEU A 471 N PHE A 461 SHEET 3 AA4 4 THR A 617 LEU A 629 -1 O HIS A 628 N THR A 479 SHEET 4 AA4 4 THR A 602 GLN A 608 -1 N VAL A 603 O ILE A 622 SHEET 1 AA5 4 GLN A 395 GLN A 398 0 SHEET 2 AA5 4 PRO A 386 VAL A 392 -1 N ILE A 390 O PHE A 397 SHEET 3 AA5 4 GLU A 425 ASP A 432 -1 O GLU A 427 N ARG A 391 SHEET 4 AA5 4 PHE A 440 ASP A 447 -1 O GLY A 442 N LEU A 430 SHEET 1 AA6 4 LYS A 541 GLU A 544 0 SHEET 2 AA6 4 PRO A 532 VAL A 538 -1 N MET A 536 O GLN A 543 SHEET 3 AA6 4 ASP A 571 ASP A 578 -1 O GLU A 575 N GLN A 535 SHEET 4 AA6 4 CYS A 583 PRO A 591 -1 O LEU A 585 N VAL A 576 SHEET 1 AA7 4 PHE B 207 ASP B 213 0 SHEET 2 AA7 4 ILE B 236 ILE B 254 -1 O GLU B 249 N ASP B 213 SHEET 3 AA7 4 CYS B 259 LEU B 276 -1 O MET B 272 N LEU B 240 SHEET 4 AA7 4 LEU B 298 THR B 304 -1 O LEU B 298 N HIS B 269 SHEET 1 AA8 5 ARG B 220 VAL B 226 0 SHEET 2 AA8 5 ILE B 236 ILE B 254 -1 O ASP B 239 N LYS B 225 SHEET 3 AA8 5 CYS B 259 LEU B 276 -1 O MET B 272 N LEU B 240 SHEET 4 AA8 5 ALA B 288 PHE B 293 -1 O PHE B 292 N ARG B 273 SHEET 5 AA8 5 ILE B 337 PRO B 340 -1 O VAL B 339 N LEU B 289 SHEET 1 AA9 6 LYS B 409 VAL B 418 0 SHEET 2 AA9 6 GLY B 357 ALA B 366 -1 N ILE B 361 O TYR B 414 SHEET 3 AA9 6 LYS B 470 MET B 481 -1 O HIS B 472 N GLU B 365 SHEET 4 AA9 6 THR B 617 LEU B 629 -1 O HIS B 628 N THR B 479 SHEET 5 AA9 6 ALA B 508 ARG B 518 -1 N SER B 516 O LYS B 619 SHEET 6 AA9 6 VAL B 555 ILE B 564 -1 O PHE B 560 N LEU B 512 SHEET 1 AB1 4 LEU B 456 THR B 462 0 SHEET 2 AB1 4 LYS B 470 MET B 481 -1 O LEU B 471 N PHE B 461 SHEET 3 AB1 4 THR B 617 LEU B 629 -1 O HIS B 628 N THR B 479 SHEET 4 AB1 4 THR B 602 GLN B 608 -1 N VAL B 603 O ILE B 622 SHEET 1 AB2 4 GLN B 395 GLN B 398 0 SHEET 2 AB2 4 TYR B 387 VAL B 392 -1 N ILE B 390 O PHE B 397 SHEET 3 AB2 4 GLU B 425 ASP B 432 -1 O GLU B 427 N ARG B 391 SHEET 4 AB2 4 ASP B 439 ASP B 447 -1 O ILE B 446 N LEU B 426 SHEET 1 AB3 4 ALA B 542 GLU B 544 0 SHEET 2 AB3 4 PRO B 532 SER B 537 -1 N MET B 536 O GLN B 543 SHEET 3 AB3 4 ASP B 571 ASP B 578 -1 O GLU B 575 N GLN B 535 SHEET 4 AB3 4 CYS B 583 PRO B 591 -1 O LEU B 585 N VAL B 576 CISPEP 1 GLU A 277 PRO A 278 0 0.30 CISPEP 2 MET A 283 PRO A 284 0 4.22 CISPEP 3 LEU A 333 PRO A 334 0 4.73 CISPEP 4 GLU B 277 PRO B 278 0 -0.98 CISPEP 5 MET B 283 PRO B 284 0 4.58 CISPEP 6 LEU B 333 PRO B 334 0 3.89 CISPEP 7 HIS B 421 PRO B 422 0 2.59 SITE 1 AC1 7 ILE A 291 LEU A 331 PRO A 334 ASN A 335 SITE 2 AC1 7 ARG A 336 ILE A 337 GLU B 249 SITE 1 AC2 10 PHE A 189 ILE A 193 VAL A 214 LEU A 219 SITE 2 AC2 10 PHE A 244 ILE A 326 ILE A 327 TYR A 330 SITE 3 AC2 10 LEU A 331 HOH A 811 SITE 1 AC3 6 TYR B 330 LEU B 331 PRO B 334 ASN B 335 SITE 2 AC3 6 ARG B 336 ILE B 337 SITE 1 AC4 11 TRP B 178 ILE B 193 VAL B 197 ALA B 200 SITE 2 AC4 11 LEU B 219 PHE B 244 ILE B 266 LEU B 318 SITE 3 AC4 11 ILE B 326 ILE B 327 TYR B 330 CRYST1 74.332 88.382 167.190 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013453 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011315 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005981 0.00000