PDB Short entry for 4P4P
HEADER    TRANSFERASE/DNA                         12-MAR-14   4P4P              
TITLE     CRYSTAL STRUCTURE OF LEISHMANIA INFANTUM POLYMERASE BETA: NICK COMPLEX
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: DNA POLYMERASE BETA;                                       
COMPND   3 CHAIN: A;                                                            
COMPND   4 ENGINEERED: YES;                                                     
COMPND   5 MOL_ID: 2;                                                           
COMPND   6 MOLECULE: DNA (5'-D(*CP*AP*GP*TP*AP*CP*T)-3');                       
COMPND   7 CHAIN: C;                                                            
COMPND   8 ENGINEERED: YES;                                                     
COMPND   9 MOL_ID: 3;                                                           
COMPND  10 MOLECULE: DNA (5'-D(P*GP*CP*CP*G)-3');                               
COMPND  11 CHAIN: D;                                                            
COMPND  12 ENGINEERED: YES;                                                     
COMPND  13 MOL_ID: 4;                                                           
COMPND  14 MOLECULE: DNA (5'-D(P*CP*GP*GP*CP*AP*GP*TP*AP*CP*TP*G)-3');          
COMPND  15 CHAIN: B;                                                            
COMPND  16 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: LEISHMANIA INFANTUM;                            
SOURCE   3 ORGANISM_TAXID: 5671;                                                
SOURCE   4 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   5 EXPRESSION_SYSTEM_TAXID: 562;                                        
SOURCE   6 MOL_ID: 2;                                                           
SOURCE   7 SYNTHETIC: YES;                                                      
SOURCE   8 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT;                            
SOURCE   9 ORGANISM_TAXID: 32630;                                               
SOURCE  10 MOL_ID: 3;                                                           
SOURCE  11 SYNTHETIC: YES;                                                      
SOURCE  12 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT;                            
SOURCE  13 ORGANISM_TAXID: 32630;                                               
SOURCE  14 MOL_ID: 4;                                                           
SOURCE  15 SYNTHETIC: YES;                                                      
SOURCE  16 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT;                            
SOURCE  17 ORGANISM_TAXID: 32630                                                
KEYWDS    DNA POLYMERASE, TRANSFERASE-DNA COMPLEX                               
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    E.MEJIA,M.BURAK,A.ALONSO,V.LARRAGA,T.KUNKEL,K.BEBENEK,M.GARCIA-DIAZ   
REVDAT   3   25-DEC-19 4P4P    1       REMARK                                   
REVDAT   2   06-SEP-17 4P4P    1       SOURCE REMARK                            
REVDAT   1   06-AUG-14 4P4P    0                                                
JRNL        AUTH   E.MEJIA,M.BURAK,A.ALONSO,V.LARRAGA,T.A.KUNKEL,K.BEBENEK,     
JRNL        AUTH 2 M.GARCIA-DIAZ                                                
JRNL        TITL   STRUCTURES OF THE LEISHMANIA INFANTUM POLYMERASE BETA.       
JRNL        REF    DNA REPAIR (AMST.)            V.  18     1 2014              
JRNL        REFN                   ISSN 1568-7856                               
JRNL        PMID   24666693                                                     
JRNL        DOI    10.1016/J.DNAREP.2014.03.001                                 
REMARK   2                                                                      
REMARK   2 RESOLUTION.    2.30 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : PHENIX (PHENIX.REFINE: 1.9_1692)                     
REMARK   3   AUTHORS     : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN            
REMARK   3               : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE,           
REMARK   3               : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER,            
REMARK   3               : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY,              
REMARK   3               : REETAL PAI,RANDY READ,JANE RICHARDSON,               
REMARK   3               : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI,           
REMARK   3               : NICHOLAS SAUTER,JACOB SMITH,LAURENT                  
REMARK   3               : STORONI,TOM TERWILLIGER,PETER ZWART                  
REMARK   3                                                                      
REMARK   3    REFINEMENT TARGET : ML                                            
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 44.30                          
REMARK   3   MIN(FOBS/SIGMA_FOBS)              : 1.360                          
REMARK   3   COMPLETENESS FOR RANGE        (%) : 99.9                           
REMARK   3   NUMBER OF REFLECTIONS             : 24483                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   R VALUE     (WORKING + TEST SET) : 0.195                           
REMARK   3   R VALUE            (WORKING SET) : 0.191                           
REMARK   3   FREE R VALUE                     : 0.234                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 8.160                           
REMARK   3   FREE R VALUE TEST SET COUNT      : 1997                            
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT (IN BINS).                           
REMARK   3   BIN  RESOLUTION RANGE  COMPL.    NWORK NFREE   RWORK  RFREE        
REMARK   3     1 44.3107 -  5.5335    1.00     1784   156  0.2233 0.2647        
REMARK   3     2  5.5335 -  4.3934    1.00     1661   148  0.1766 0.2036        
REMARK   3     3  4.3934 -  3.8384    1.00     1626   144  0.1656 0.1981        
REMARK   3     4  3.8384 -  3.4876    1.00     1612   144  0.1817 0.2344        
REMARK   3     5  3.4876 -  3.2377    1.00     1607   143  0.1822 0.2331        
REMARK   3     6  3.2377 -  3.0469    1.00     1593   142  0.2152 0.2475        
REMARK   3     7  3.0469 -  2.8943    1.00     1605   142  0.2017 0.2690        
REMARK   3     8  2.8943 -  2.7683    1.00     1586   141  0.1915 0.2590        
REMARK   3     9  2.7683 -  2.6618    1.00     1561   139  0.1896 0.2178        
REMARK   3    10  2.6618 -  2.5699    1.00     1583   141  0.1833 0.2085        
REMARK   3    11  2.5699 -  2.4896    1.00     1574   140  0.1773 0.2097        
REMARK   3    12  2.4896 -  2.4184    1.00     1567   139  0.1860 0.2696        
REMARK   3    13  2.4184 -  2.3548    1.00     1591   141  0.2122 0.2372        
REMARK   3    14  2.3548 -  2.2973    0.98     1536   137  0.2131 0.2732        
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELLING.                                             
REMARK   3   METHOD USED        : FLAT BULK SOLVENT MODEL                       
REMARK   3   SOLVENT RADIUS     : 1.11                                          
REMARK   3   SHRINKAGE RADIUS   : 0.90                                          
REMARK   3   K_SOL              : NULL                                          
REMARK   3   B_SOL              : NULL                                          
REMARK   3                                                                      
REMARK   3  ERROR ESTIMATES.                                                    
REMARK   3   COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED)     : 0.220            
REMARK   3   PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.140           
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : NULL                           
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : NULL                           
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : NULL                                                 
REMARK   3    B22 (A**2) : NULL                                                 
REMARK   3    B33 (A**2) : NULL                                                 
REMARK   3    B12 (A**2) : NULL                                                 
REMARK   3    B13 (A**2) : NULL                                                 
REMARK   3    B23 (A**2) : NULL                                                 
REMARK   3                                                                      
REMARK   3  TWINNING INFORMATION.                                               
REMARK   3   FRACTION: NULL                                                     
REMARK   3   OPERATOR: NULL                                                     
REMARK   3                                                                      
REMARK   3  DEVIATIONS FROM IDEAL VALUES.                                       
REMARK   3                 RMSD          COUNT                                  
REMARK   3   BOND      :  0.006           2705                                  
REMARK   3   ANGLE     :  1.045           3730                                  
REMARK   3   CHIRALITY :  0.064            412                                  
REMARK   3   PLANARITY :  0.005            420                                  
REMARK   3   DIHEDRAL  : 18.591           1058                                  
REMARK   3                                                                      
REMARK   3  TLS DETAILS                                                         
REMARK   3   NUMBER OF TLS GROUPS  : 1                                          
REMARK   3   TLS GROUP : 1                                                      
REMARK   3    SELECTION: CHAIN 'A' AND (RESID 32 THROUGH 376 )                  
REMARK   3    ORIGIN FOR THE GROUP (A):  -2.9780 -34.8218  -8.3482              
REMARK   3    T TENSOR                                                          
REMARK   3      T11:   0.1832 T22:   0.1342                                     
REMARK   3      T33:   0.1402 T12:   0.0018                                     
REMARK   3      T13:   0.0389 T23:   0.0084                                     
REMARK   3    L TENSOR                                                          
REMARK   3      L11:   1.2033 L22:   0.9346                                     
REMARK   3      L33:   0.6783 L12:  -0.5622                                     
REMARK   3      L13:  -0.6819 L23:   0.3895                                     
REMARK   3    S TENSOR                                                          
REMARK   3      S11:   0.1093 S12:  -0.0669 S13:   0.0329                       
REMARK   3      S21:   0.0630 S22:  -0.0528 S23:   0.0153                       
REMARK   3      S31:  -0.0646 S32:   0.0016 S33:  -0.0444                       
REMARK   3                                                                      
REMARK   3  NCS DETAILS                                                         
REMARK   3   NUMBER OF NCS GROUPS : NULL                                        
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 4P4P COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-MAR-14.                  
REMARK 100 THE DEPOSITION ID IS D_1000200693.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 21-APR-11                          
REMARK 200  TEMPERATURE           (KELVIN) : 100                                
REMARK 200  PH                             : NULL                               
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : NSLS                               
REMARK 200  BEAMLINE                       : X25                                
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 1.1                                
REMARK 200  MONOCHROMATOR                  : NULL                               
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : PIXEL                              
REMARK 200  DETECTOR MANUFACTURER          : DECTRIS PILATUS 6M                 
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : NULL                               
REMARK 200  DATA SCALING SOFTWARE          : NULL                               
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 24544                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 2.297                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 50.000                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : NULL                               
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 100.0                              
REMARK 200  DATA REDUNDANCY                : 7.800                              
REMARK 200  R MERGE                    (I) : NULL                               
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 20.9000                            
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : NULL                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : NULL                               
REMARK 200  DATA REDUNDANCY IN SHELL       : NULL                               
REMARK 200  R MERGE FOR SHELL          (I) : NULL                               
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : NULL                               
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT        
REMARK 200 SOFTWARE USED: NULL                                                  
REMARK 200 STARTING MODEL: 1BPY                                                 
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 53.66                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.65                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M AMMONIUM SULFATE, 0.1 M SODIUM     
REMARK 280  ACETATE, PH 4.6 AND 12.5% PEG 4000, VAPOR DIFFUSION, HANGING        
REMARK 280  DROP, TEMPERATURE 277K                                              
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2                         
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -Y,X-Y,Z+2/3                                            
REMARK 290       3555   -X+Y,-X,Z+1/3                                           
REMARK 290       4555   -X,-Y,Z+1/2                                             
REMARK 290       5555   Y,-X+Y,Z+1/6                                            
REMARK 290       6555   X-Y,X,Z+5/6                                             
REMARK 290       7555   Y,X,-Z+2/3                                              
REMARK 290       8555   X-Y,-Y,-Z                                               
REMARK 290       9555   -X,-X+Y,-Z+1/3                                          
REMARK 290      10555   -Y,-X,-Z+1/6                                            
REMARK 290      11555   -X+Y,Y,-Z+1/2                                           
REMARK 290      12555   X,X-Y,-Z+5/6                                            
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -0.500000 -0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   2  0.866025 -0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000  1.000000      106.40600            
REMARK 290   SMTRY1   3 -0.500000  0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   3 -0.866025 -0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   3  0.000000  0.000000  1.000000       53.20300            
REMARK 290   SMTRY1   4 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   4  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   4  0.000000  0.000000  1.000000       79.80450            
REMARK 290   SMTRY1   5  0.500000  0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   5 -0.866025  0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   5  0.000000  0.000000  1.000000       26.60150            
REMARK 290   SMTRY1   6  0.500000 -0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   6  0.866025  0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   6  0.000000  0.000000  1.000000      133.00750            
REMARK 290   SMTRY1   7 -0.500000  0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   7  0.866025  0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   7  0.000000  0.000000 -1.000000      106.40600            
REMARK 290   SMTRY1   8  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   8  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   8  0.000000  0.000000 -1.000000        0.00000            
REMARK 290   SMTRY1   9 -0.500000 -0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   9 -0.866025  0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   9  0.000000  0.000000 -1.000000       53.20300            
REMARK 290   SMTRY1  10  0.500000 -0.866025  0.000000        0.00000            
REMARK 290   SMTRY2  10 -0.866025 -0.500000  0.000000        0.00000            
REMARK 290   SMTRY3  10  0.000000  0.000000 -1.000000       26.60150            
REMARK 290   SMTRY1  11 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2  11  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3  11  0.000000  0.000000 -1.000000       79.80450            
REMARK 290   SMTRY1  12  0.500000  0.866025  0.000000        0.00000            
REMARK 290   SMTRY2  12  0.866025 -0.500000  0.000000        0.00000            
REMARK 290   SMTRY3  12  0.000000  0.000000 -1.000000      133.00750            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC                        
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC                 
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 TOTAL BURIED SURFACE AREA: 4040 ANGSTROM**2                          
REMARK 350 SURFACE AREA OF THE COMPLEX: 16190 ANGSTROM**2                       
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -35.0 KCAL/MOL                        
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, D, B                            
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 375                                                                      
REMARK 375 SPECIAL POSITION                                                     
REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS            
REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL          
REMARK 375 POSITIONS.                                                           
REMARK 375                                                                      
REMARK 375 ATOM RES CSSEQI                                                      
REMARK 375      HOH A 527  LIES ON A SPECIAL POSITION.                          
REMARK 375      HOH A 542  LIES ON A SPECIAL POSITION.                          
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     GLY A    -1                                                      
REMARK 465     HIS A     0                                                      
REMARK 465     MET A     1                                                      
REMARK 465     LEU A     2                                                      
REMARK 465     ARG A     3                                                      
REMARK 465     ARG A     4                                                      
REMARK 465     LYS A     5                                                      
REMARK 465     PHE A     6                                                      
REMARK 465     LEU A     7                                                      
REMARK 465     ARG A     8                                                      
REMARK 465     ARG A     9                                                      
REMARK 465     ASP A    10                                                      
REMARK 465     HIS A    11                                                      
REMARK 465     ARG A    12                                                      
REMARK 465     GLU A    13                                                      
REMARK 465     ASN A    14                                                      
REMARK 465     ILE A    15                                                      
REMARK 465     ILE A    16                                                      
REMARK 465     ARG A    17                                                      
REMARK 465     ILE A    18                                                      
REMARK 465     PHE A    19                                                      
REMARK 465     GLN A    20                                                      
REMARK 465     GLU A    21                                                      
REMARK 465     MET A    22                                                      
REMARK 465     ALA A    23                                                      
REMARK 465     ASP A    24                                                      
REMARK 465     LEU A    25                                                      
REMARK 465     ASN A    26                                                      
REMARK 465     ASN A    27                                                      
REMARK 465     ALA A    28                                                      
REMARK 465     LEU A    29                                                      
REMARK 465     GLY A    30                                                      
REMARK 465     GLU A    31                                                      
REMARK 465     SER A    36                                                      
REMARK 465     SER A    37                                                      
REMARK 465     TYR A    38                                                      
REMARK 465     HIS A    39                                                      
REMARK 465     ARG A    40                                                      
REMARK 465     SER A    41                                                      
REMARK 465     ILE A    42                                                      
REMARK 465     GLU A    43                                                      
REMARK 465     SER A    44                                                      
REMARK 465     LEU A    45                                                      
REMARK 465     LYS A    46                                                      
REMARK 465     THR A    47                                                      
REMARK 465     ASN A    48                                                      
REMARK 465     LEU A    49                                                      
REMARK 465     ASP A    50                                                      
REMARK 465     LYS A    51                                                      
REMARK 465     PRO A    52                                                      
REMARK 465     LEU A    53                                                      
REMARK 465     ASN A    54                                                      
REMARK 465     THR A    55                                                      
REMARK 465     PRO A    56                                                      
REMARK 465     GLN A    57                                                      
REMARK 465     ASP A    58                                                      
REMARK 465     LEU A    59                                                      
REMARK 465     LYS A    60                                                      
REMARK 465     ALA A    61                                                      
REMARK 465     PHE A    62                                                      
REMARK 465     SER A    63                                                      
REMARK 465     GLY A    64                                                      
REMARK 465     PHE A    65                                                      
REMARK 465     GLY A    66                                                      
REMARK 465     ALA A    67                                                      
REMARK 465     LYS A    68                                                      
REMARK 465     LEU A    69                                                      
REMARK 465     LEU A    70                                                      
REMARK 465     LYS A    71                                                      
REMARK 465     LYS A    72                                                      
REMARK 465     ALA A    73                                                      
REMARK 465     GLU A    74                                                      
REMARK 465     GLU A    75                                                      
REMARK 465     ILE A    76                                                      
REMARK 465     MET A    77                                                      
REMARK 465     ALA A    78                                                      
REMARK 465     THR A    79                                                      
REMARK 465     GLY A    80                                                      
REMARK 465     LYS A    81                                                      
REMARK 465     LEU A    82                                                      
REMARK 465     GLU A    83                                                      
REMARK 465     GLU A    84                                                      
REMARK 465     LEU A    85                                                      
REMARK 465     GLU A    86                                                      
REMARK 465     SER A    87                                                      
REMARK 465     LYS A    88                                                      
REMARK 465     THR A    89                                                      
REMARK 465     LYS A    90                                                      
REMARK 465     VAL A   253                                                      
REMARK 465     ARG A   254                                                      
REMARK 465     ASP A   255                                                      
REMARK 465     LYS A   256                                                      
REMARK 465     ALA A   257                                                      
REMARK 465     GLY A   258                                                      
REMARK 465     ARG A   259                                                      
REMARK 465     GLU A   260                                                      
REMARK 465      DC D     3                                                      
REMARK 465      DG D     4                                                      
REMARK 465      DC B     1                                                      
REMARK 470                                                                      
REMARK 470 MISSING ATOM                                                         
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;           
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;          
REMARK 470 I=INSERTION CODE):                                                   
REMARK 470   M RES CSSEQI  ATOMS                                                
REMARK 470     LEU A  93    CG   CD1  CD2                                       
REMARK 470     LYS A  94    CG   CD   CE   NZ                                   
REMARK 470     ARG A 108    CD   NE   CZ   NH1  NH2                             
REMARK 470     GLU A 320    CG   CD   OE1  OE2                                  
REMARK 470     ARG A 332    CG   CD   NE   CZ   NH1  NH2                        
REMARK 470      DG B   2    P    OP1  OP2                                       
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS                                      
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3)               
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   RES CSSEQI ATM2   DEVIATION                     
REMARK 500     DG D   1   P      DG D   1   OP3    -0.129                       
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES                                       
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)              
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   ATM2   ATM3                                     
REMARK 500     DG C   3   O4' -  C1' -  N9  ANGL. DEV. =   2.3 DEGREES          
REMARK 500     DT C   4   O4' -  C1' -  N1  ANGL. DEV. =   2.5 DEGREES          
REMARK 500     DC C   6   O4' -  C4' -  C3' ANGL. DEV. =  -2.7 DEGREES          
REMARK 500     DG D   1   OP1 -  P   -  OP2 ANGL. DEV. = -11.9 DEGREES          
REMARK 500     DC B   4   C3' -  C2' -  C1' ANGL. DEV. =  -4.8 DEGREES          
REMARK 500     DC B   4   O4' -  C1' -  N1  ANGL. DEV. =   5.7 DEGREES          
REMARK 500     DG B   6   O4' -  C1' -  N9  ANGL. DEV. =   1.9 DEGREES          
REMARK 500     DT B   7   O4' -  C1' -  N1  ANGL. DEV. =   2.3 DEGREES          
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    CYS A 182     -131.69   -112.65                                   
REMARK 500    ARG A 332      -66.68    -23.39                                   
REMARK 500    LYS A 334      -84.28   -117.39                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 620                                                                      
REMARK 620 METAL COORDINATION                                                   
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):                             
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              NA A 401  NA                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 THR A 100   O                                                      
REMARK 620 2 VAL A 102   O    95.8                                              
REMARK 620 3 PHE A 105   O    91.3  76.0                                        
REMARK 620 4  DA C   5   OP1 171.2  82.6  79.9                                  
REMARK 620 5 HOH A 646   O    87.7  83.9 159.7 100.7                            
REMARK 620 6 HOH C 117   O    79.1 167.1  92.2 100.6 107.5                      
REMARK 620 N                    1     2     3     4     5                       
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 401                  
DBREF  4P4P A    1   376  UNP    Q9U6N3   Q9U6N3_LEIIN     1    376             
DBREF  4P4P C    1     6  PDB    4P4P     4P4P             1      6             
DBREF  4P4P D    1     3  PDB    4P4P     4P4P             1      3             
DBREF  4P4P B    1    11  PDB    4P4P     4P4P             1     11             
SEQADV 4P4P GLY A   -1  UNP  Q9U6N3              EXPRESSION TAG                 
SEQADV 4P4P HIS A    0  UNP  Q9U6N3              EXPRESSION TAG                 
SEQRES   1 A  378  GLY HIS MET LEU ARG ARG LYS PHE LEU ARG ARG ASP HIS          
SEQRES   2 A  378  ARG GLU ASN ILE ILE ARG ILE PHE GLN GLU MET ALA ASP          
SEQRES   3 A  378  LEU ASN ASN ALA LEU GLY GLU LYS TYR LYS VAL SER SER          
SEQRES   4 A  378  TYR HIS ARG SER ILE GLU SER LEU LYS THR ASN LEU ASP          
SEQRES   5 A  378  LYS PRO LEU ASN THR PRO GLN ASP LEU LYS ALA PHE SER          
SEQRES   6 A  378  GLY PHE GLY ALA LYS LEU LEU LYS LYS ALA GLU GLU ILE          
SEQRES   7 A  378  MET ALA THR GLY LYS LEU GLU GLU LEU GLU SER LYS THR          
SEQRES   8 A  378  LYS PRO LYS LEU LYS ALA ILE GLN GLU LEU THR GLN VAL          
SEQRES   9 A  378  HIS GLY PHE GLY PRO ARG ALA ALA ALA ALA LEU PHE ASP          
SEQRES  10 A  378  ARG GLU GLY ILE PHE THR VAL ASP GLU LEU LEU GLN LYS          
SEQRES  11 A  378  ALA ASP SER ILE PRO SER LEU THR ASP GLN GLN ARG VAL          
SEQRES  12 A  378  GLY ILE LYS TYR PHE TYR ASP ILE ASN GLU LYS ILE PRO          
SEQRES  13 A  378  MET GLN GLU SER VAL LEU HIS GLU ASN TYR LEU ARG GLU          
SEQRES  14 A  378  LYS CYS MET GLU VAL LEU GLY LYS ASP PHE SER ILE LEU          
SEQRES  15 A  378  ILE CYS GLY SER TYR ARG ARG ARG HIS PRO PHE SER GLY          
SEQRES  16 A  378  ASP VAL ASP ALA ILE LEU SER ARG THR LEU ASP ALA PRO          
SEQRES  17 A  378  PRO LEU SER GLU PRO VAL ALA ALA THR GLY VAL LEU GLY          
SEQRES  18 A  378  HIS PHE VAL GLU PHE LEU GLU SER LEU LYS TYR LEU GLU          
SEQRES  19 A  378  ALA THR MET ALA GLN GLY PRO LEU LYS TYR MET GLY MET          
SEQRES  20 A  378  GLY ARG LEU PRO PRO ARG ILE VAL ARG ASP LYS ALA GLY          
SEQRES  21 A  378  ARG GLU ASN THR LYS VAL TYR LYS ALA ARG ARG VAL ASP          
SEQRES  22 A  378  ILE ARG LEU ILE GLU THR LYS SER VAL PRO THR ALA MET          
SEQRES  23 A  378  LEU THR PHE THR GLY SER LYS ASN PHE ASN VAL ILE MET          
SEQRES  24 A  378  ARG GLN ALA ALA ILE SER LYS GLY TYR LEU LEU ASN GLU          
SEQRES  25 A  378  TYR GLY LEU PHE LYS LEU GLY THR PRO GLU GLU ALA ARG          
SEQRES  26 A  378  ALA LEU TYR GLU ARG ILE GLY ILE ARG GLY LYS ASN ALA          
SEQRES  27 A  378  GLY GLU GLU LEU GLY VAL PRO LYS ASP GLU LEU GLU ASP          
SEQRES  28 A  378  LYS ARG VAL GLU VAL ARG SER GLU GLN ASP VAL PHE ASP          
SEQRES  29 A  378  VAL LEU GLY MET PRO TYR ALA LYS PRO GLU ASN ARG ASP          
SEQRES  30 A  378  PRO                                                          
SEQRES   1 C    7   DC  DA  DG  DT  DA  DC  DT                                  
SEQRES   1 D    4   DG  DC  DC  DG                                              
SEQRES   1 B   11   DC  DG  DG  DC  DA  DG  DT  DA  DC  DT  DG                  
HET     NA  A 401       1                                                       
HETNAM      NA SODIUM ION                                                       
FORMUL   5   NA    NA 1+                                                        
FORMUL   6  HOH   *250(H2 O)                                                    
HELIX    1 AA1 LYS A   92  THR A  100  1                                   9    
HELIX    2 AA2 GLY A  106  GLY A  118  1                                  13    
HELIX    3 AA3 THR A  121  ALA A  129  1                                   9    
HELIX    4 AA4 ASP A  130  ILE A  132  5                                   3    
HELIX    5 AA5 THR A  136  TYR A  145  1                                  10    
HELIX    6 AA6 TYR A  145  ASN A  150  1                                   6    
HELIX    7 AA7 MET A  155  LEU A  173  1                                  19    
HELIX    8 AA8 CYS A  182  ARG A  187  1                                   6    
HELIX    9 AA9 PRO A  211  THR A  215  5                                   5    
HELIX   10 AB1 GLY A  216  LEU A  228  1                                  13    
HELIX   11 AB2 GLU A  276  LYS A  278  5                                   3    
HELIX   12 AB3 SER A  279  GLY A  289  1                                  11    
HELIX   13 AB4 SER A  290  LYS A  304  1                                  15    
HELIX   14 AB5 THR A  318  GLY A  330  1                                  13    
HELIX   15 AB6 LYS A  344  ASP A  349  1                                   6    
HELIX   16 AB7 SER A  356  LEU A  364  1                                   9    
HELIX   17 AB8 LYS A  370  ARG A  374  5                                   5    
SHEET    1 AA1 2 ILE A 153  PRO A 154  0                                        
SHEET    2 AA1 2 PHE A 191  SER A 192 -1  O  SER A 192   N  ILE A 153           
SHEET    1 AA2 5 PHE A 177  ILE A 181  0                                        
SHEET    2 AA2 5 VAL A 195  ARG A 201 -1  O  ILE A 198   N  LEU A 180           
SHEET    3 AA2 5 ARG A 268  ILE A 275  1  O  ARG A 273   N  LEU A 199           
SHEET    4 AA2 5 LYS A 241  GLY A 246 -1  N  GLY A 246   O  ARG A 268           
SHEET    5 AA2 5 LEU A 231  GLN A 237 -1  N  ALA A 236   O  MET A 243           
SHEET    1 AA3 2 TYR A 306  ASN A 309  0                                        
SHEET    2 AA3 2 GLY A 312  LYS A 315 -1  O  PHE A 314   N  LEU A 307           
SHEET    1 AA4 2 GLU A 338  GLU A 339  0                                        
SHEET    2 AA4 2 VAL A 342  PRO A 343 -1  O  VAL A 342   N  GLU A 339           
LINK         O   THR A 100                NA    NA A 401     1555   1555  2.47  
LINK         O   VAL A 102                NA    NA A 401     1555   1555  2.92  
LINK         O   PHE A 105                NA    NA A 401     1555   1555  2.94  
LINK         OP1  DA C   5                NA    NA A 401     1555   1555  2.53  
LINK        NA    NA A 401                 O   HOH A 646     1555   1555  2.85  
LINK        NA    NA A 401                 O   HOH C 117     1555   1555  2.16  
CISPEP   1 GLY A  289    SER A  290          0         0.76                     
SITE     1 AC1  6 THR A 100  VAL A 102  PHE A 105  HOH A 646                    
SITE     2 AC1  6  DA C   5  HOH C 117                                          
CRYST1  106.497  106.497  159.609  90.00  90.00 120.00 P 65 2 2     12          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.009390  0.005421  0.000000        0.00000                         
SCALE2      0.000000  0.010843  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.006265        0.00000