PDB Short entry for 4PFJ HEADER HYDROLASE 29-APR-14 4PFJ TITLE THE STRUCTURE OF BI-ACETYLATED SAHH COMPND MOL_ID: 1; COMPND 2 MOLECULE: ADENOSYLHOMOCYSTEINASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ADOHCYASE, S-ADENOSYL-L-HOMOCYSTEINE HYDROLASE; COMPND 5 EC: 3.3.1.1; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: AHCY, SAHH; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ACETYLATION SAHH HYDROLASE SEMI-SYNTHETIC, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR J.M.KAVRAN,Y.WANG,P.A.COLE,D.J.LEAHY REVDAT 7 15-NOV-23 4PFJ 1 ATOM REVDAT 6 27-SEP-23 4PFJ 1 REMARK REVDAT 5 17-JAN-18 4PFJ 1 REMARK SITE ATOM REVDAT 4 22-NOV-17 4PFJ 1 SOURCE JRNL REMARK REVDAT 3 19-NOV-14 4PFJ 1 JRNL REVDAT 2 08-OCT-14 4PFJ 1 JRNL REVDAT 1 01-OCT-14 4PFJ 0 JRNL AUTH Y.WANG,J.M.KAVRAN,Z.CHEN,K.R.KARUKURICHI,D.J.LEAHY,P.A.COLE JRNL TITL REGULATION OF S-ADENOSYLHOMOCYSTEINE HYDROLASE BY LYSINE JRNL TITL 2 ACETYLATION. JRNL REF J.BIOL.CHEM. V. 289 31361 2014 JRNL REFN ESSN 1083-351X JRNL PMID 25248746 JRNL DOI 10.1074/JBC.M114.597153 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.4_1496 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.18 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 39774 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.196 REMARK 3 R VALUE (WORKING SET) : 0.194 REMARK 3 FREE R VALUE : 0.245 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.050 REMARK 3 FREE R VALUE TEST SET COUNT : 2008 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.1942 - 5.5435 0.99 2858 133 0.1834 0.2337 REMARK 3 2 5.5435 - 4.4009 1.00 2756 145 0.1590 0.1948 REMARK 3 3 4.4009 - 3.8449 1.00 2714 145 0.1545 0.2211 REMARK 3 4 3.8449 - 3.4934 1.00 2724 141 0.1637 0.2085 REMARK 3 5 3.4934 - 3.2431 1.00 2693 146 0.1825 0.2282 REMARK 3 6 3.2431 - 3.0519 1.00 2695 151 0.1995 0.2549 REMARK 3 7 3.0519 - 2.8991 1.00 2685 141 0.2148 0.2897 REMARK 3 8 2.8991 - 2.7729 1.00 2679 161 0.2216 0.2556 REMARK 3 9 2.7729 - 2.6662 1.00 2701 133 0.2258 0.3133 REMARK 3 10 2.6662 - 2.5742 1.00 2666 135 0.2442 0.2892 REMARK 3 11 2.5742 - 2.4937 1.00 2683 146 0.2397 0.2763 REMARK 3 12 2.4937 - 2.4224 1.00 2685 130 0.2613 0.3402 REMARK 3 13 2.4224 - 2.3586 1.00 2621 165 0.2662 0.2924 REMARK 3 14 2.3586 - 2.3011 0.97 2606 136 0.3010 0.3484 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.310 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.510 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 6920 REMARK 3 ANGLE : 0.847 9393 REMARK 3 CHIRALITY : 0.030 1058 REMARK 3 PLANARITY : 0.003 1193 REMARK 3 DIHEDRAL : 14.259 2544 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4PFJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-APR-14. REMARK 100 THE DEPOSITION ID IS D_1000201295. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-JAN-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL7-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.918 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39810 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 10.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 5.90 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.240 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1LI4 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.12 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.33 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3350, SODIUM FORMATE, BIS-TRIS, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 49.18300 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 51.36350 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 88.08000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 49.18300 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 51.36350 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 88.08000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 49.18300 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 51.36350 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 88.08000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 49.18300 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 51.36350 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 88.08000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 28540 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 51630 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -130.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 98.36600 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 603 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 ASP B 3 REMARK 465 LYS B 4 REMARK 465 LEU B 5 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 ALY A 408 CH REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HD21 ASN B 179 OD2 ASP B 182 1.53 REMARK 500 HD21 ASN A 179 OD2 ASP A 182 1.57 REMARK 500 O HOH A 749 O HOH A 775 2.09 REMARK 500 ND2 ASN B 179 OD2 ASP B 182 2.09 REMARK 500 OE1 GLU B 26 O HOH B 601 2.17 REMARK 500 O ALA B 72 O HOH B 602 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 11 100.37 -161.19 REMARK 500 HIS A 55 122.90 -34.35 REMARK 500 ALA A 101 141.25 -172.31 REMARK 500 LYS A 186 -72.43 -103.39 REMARK 500 PHE A 189 -64.78 -125.60 REMARK 500 THR A 275 25.45 -140.92 REMARK 500 ALA A 350 -152.43 -146.91 REMARK 500 TYR B 7 -179.81 -172.07 REMARK 500 LYS B 8 116.98 -161.75 REMARK 500 ALA B 101 146.22 -171.84 REMARK 500 PRO B 124 179.99 -58.74 REMARK 500 LYS B 186 -74.99 -87.83 REMARK 500 PHE B 189 -57.73 -121.96 REMARK 500 LEU B 192 -73.47 -81.42 REMARK 500 ASP B 303 49.41 -86.25 REMARK 500 ALA B 350 -149.66 -138.03 REMARK 500 VAL B 381 102.51 -54.29 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 794 DISTANCE = 6.62 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NAD A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ADN A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NAD B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ADN B 502 DBREF 4PFJ A 1 432 UNP P23526 SAHH_HUMAN 1 432 DBREF 4PFJ B 1 432 UNP P23526 SAHH_HUMAN 1 432 SEQADV 4PFJ ASN A 86 UNP P23526 ASP 86 VARIANT SEQADV 4PFJ CYS A 396 UNP P23526 GLU 396 ENGINEERED MUTATION SEQADV 4PFJ ASN B 86 UNP P23526 ASP 86 VARIANT SEQADV 4PFJ CYS B 396 UNP P23526 GLU 396 ENGINEERED MUTATION SEQRES 1 A 432 MET SER ASP LYS LEU PRO TYR LYS VAL ALA ASP ILE GLY SEQRES 2 A 432 LEU ALA ALA TRP GLY ARG LYS ALA LEU ASP ILE ALA GLU SEQRES 3 A 432 ASN GLU MET PRO GLY LEU MET ARG MET ARG GLU ARG TYR SEQRES 4 A 432 SER ALA SER LYS PRO LEU LYS GLY ALA ARG ILE ALA GLY SEQRES 5 A 432 CYS LEU HIS MET THR VAL GLU THR ALA VAL LEU ILE GLU SEQRES 6 A 432 THR LEU VAL THR LEU GLY ALA GLU VAL GLN TRP SER SER SEQRES 7 A 432 CYS ASN ILE PHE SER THR GLN ASN HIS ALA ALA ALA ALA SEQRES 8 A 432 ILE ALA LYS ALA GLY ILE PRO VAL TYR ALA TRP LYS GLY SEQRES 9 A 432 GLU THR ASP GLU GLU TYR LEU TRP CYS ILE GLU GLN THR SEQRES 10 A 432 LEU TYR PHE LYS ASP GLY PRO LEU ASN MET ILE LEU ASP SEQRES 11 A 432 ASP GLY GLY ASP LEU THR ASN LEU ILE HIS THR LYS TYR SEQRES 12 A 432 PRO GLN LEU LEU PRO GLY ILE ARG GLY ILE SER GLU GLU SEQRES 13 A 432 THR THR THR GLY VAL HIS ASN LEU TYR LYS MET MET ALA SEQRES 14 A 432 ASN GLY ILE LEU LYS VAL PRO ALA ILE ASN VAL ASN ASP SEQRES 15 A 432 SER VAL THR LYS SER LYS PHE ASP ASN LEU TYR GLY CYS SEQRES 16 A 432 ARG GLU SER LEU ILE ASP GLY ILE LYS ARG ALA THR ASP SEQRES 17 A 432 VAL MET ILE ALA GLY LYS VAL ALA VAL VAL ALA GLY TYR SEQRES 18 A 432 GLY ASP VAL GLY LYS GLY CYS ALA GLN ALA LEU ARG GLY SEQRES 19 A 432 PHE GLY ALA ARG VAL ILE ILE THR GLU ILE ASP PRO ILE SEQRES 20 A 432 ASN ALA LEU GLN ALA ALA MET GLU GLY TYR GLU VAL THR SEQRES 21 A 432 THR MET ASP GLU ALA CYS GLN GLU GLY ASN ILE PHE VAL SEQRES 22 A 432 THR THR THR GLY CYS ILE ASP ILE ILE LEU GLY ARG HIS SEQRES 23 A 432 PHE GLU GLN MET LYS ASP ASP ALA ILE VAL CYS ASN ILE SEQRES 24 A 432 GLY HIS PHE ASP VAL GLU ILE ASP VAL LYS TRP LEU ASN SEQRES 25 A 432 GLU ASN ALA VAL GLU LYS VAL ASN ILE LYS PRO GLN VAL SEQRES 26 A 432 ASP ARG TYR ARG LEU LYS ASN GLY ARG ARG ILE ILE LEU SEQRES 27 A 432 LEU ALA GLU GLY ARG LEU VAL ASN LEU GLY CYS ALA MET SEQRES 28 A 432 GLY HIS PRO SER PHE VAL MET SER ASN SER PHE THR ASN SEQRES 29 A 432 GLN VAL MET ALA GLN ILE GLU LEU TRP THR HIS PRO ASP SEQRES 30 A 432 LYS TYR PRO VAL GLY VAL HIS PHE LEU PRO LYS LYS LEU SEQRES 31 A 432 ASP GLU ALA VAL ALA CYS ALA HIS LEU GLY ALY LEU ASN SEQRES 32 A 432 VAL LYS LEU THR ALY LEU THR GLU LYS GLN ALA GLN TYR SEQRES 33 A 432 LEU GLY MET SER CYS ASP GLY PRO PHE LYS PRO ASP HIS SEQRES 34 A 432 TYR ARG TYR SEQRES 1 B 432 MET SER ASP LYS LEU PRO TYR LYS VAL ALA ASP ILE GLY SEQRES 2 B 432 LEU ALA ALA TRP GLY ARG LYS ALA LEU ASP ILE ALA GLU SEQRES 3 B 432 ASN GLU MET PRO GLY LEU MET ARG MET ARG GLU ARG TYR SEQRES 4 B 432 SER ALA SER LYS PRO LEU LYS GLY ALA ARG ILE ALA GLY SEQRES 5 B 432 CYS LEU HIS MET THR VAL GLU THR ALA VAL LEU ILE GLU SEQRES 6 B 432 THR LEU VAL THR LEU GLY ALA GLU VAL GLN TRP SER SER SEQRES 7 B 432 CYS ASN ILE PHE SER THR GLN ASN HIS ALA ALA ALA ALA SEQRES 8 B 432 ILE ALA LYS ALA GLY ILE PRO VAL TYR ALA TRP LYS GLY SEQRES 9 B 432 GLU THR ASP GLU GLU TYR LEU TRP CYS ILE GLU GLN THR SEQRES 10 B 432 LEU TYR PHE LYS ASP GLY PRO LEU ASN MET ILE LEU ASP SEQRES 11 B 432 ASP GLY GLY ASP LEU THR ASN LEU ILE HIS THR LYS TYR SEQRES 12 B 432 PRO GLN LEU LEU PRO GLY ILE ARG GLY ILE SER GLU GLU SEQRES 13 B 432 THR THR THR GLY VAL HIS ASN LEU TYR LYS MET MET ALA SEQRES 14 B 432 ASN GLY ILE LEU LYS VAL PRO ALA ILE ASN VAL ASN ASP SEQRES 15 B 432 SER VAL THR LYS SER LYS PHE ASP ASN LEU TYR GLY CYS SEQRES 16 B 432 ARG GLU SER LEU ILE ASP GLY ILE LYS ARG ALA THR ASP SEQRES 17 B 432 VAL MET ILE ALA GLY LYS VAL ALA VAL VAL ALA GLY TYR SEQRES 18 B 432 GLY ASP VAL GLY LYS GLY CYS ALA GLN ALA LEU ARG GLY SEQRES 19 B 432 PHE GLY ALA ARG VAL ILE ILE THR GLU ILE ASP PRO ILE SEQRES 20 B 432 ASN ALA LEU GLN ALA ALA MET GLU GLY TYR GLU VAL THR SEQRES 21 B 432 THR MET ASP GLU ALA CYS GLN GLU GLY ASN ILE PHE VAL SEQRES 22 B 432 THR THR THR GLY CYS ILE ASP ILE ILE LEU GLY ARG HIS SEQRES 23 B 432 PHE GLU GLN MET LYS ASP ASP ALA ILE VAL CYS ASN ILE SEQRES 24 B 432 GLY HIS PHE ASP VAL GLU ILE ASP VAL LYS TRP LEU ASN SEQRES 25 B 432 GLU ASN ALA VAL GLU LYS VAL ASN ILE LYS PRO GLN VAL SEQRES 26 B 432 ASP ARG TYR ARG LEU LYS ASN GLY ARG ARG ILE ILE LEU SEQRES 27 B 432 LEU ALA GLU GLY ARG LEU VAL ASN LEU GLY CYS ALA MET SEQRES 28 B 432 GLY HIS PRO SER PHE VAL MET SER ASN SER PHE THR ASN SEQRES 29 B 432 GLN VAL MET ALA GLN ILE GLU LEU TRP THR HIS PRO ASP SEQRES 30 B 432 LYS TYR PRO VAL GLY VAL HIS PHE LEU PRO LYS LYS LEU SEQRES 31 B 432 ASP GLU ALA VAL ALA CYS ALA HIS LEU GLY ALY LEU ASN SEQRES 32 B 432 VAL LYS LEU THR ALY LEU THR GLU LYS GLN ALA GLN TYR SEQRES 33 B 432 LEU GLY MET SER CYS ASP GLY PRO PHE LYS PRO ASP HIS SEQRES 34 B 432 TYR ARG TYR MODRES 4PFJ ALY A 401 LYS MODIFIED RESIDUE MODRES 4PFJ ALY A 408 LYS MODIFIED RESIDUE MODRES 4PFJ ALY B 401 LYS MODIFIED RESIDUE MODRES 4PFJ ALY B 408 LYS MODIFIED RESIDUE HET ALY A 401 26 HET ALY A 408 25 HET ALY B 401 26 HET ALY B 408 25 HET NAD A 501 70 HET ADN A 502 32 HET NAD B 501 70 HET ADN B 502 32 HETNAM ALY N(6)-ACETYLLYSINE HETNAM NAD NICOTINAMIDE-ADENINE-DINUCLEOTIDE HETNAM ADN ADENOSINE FORMUL 1 ALY 4(C8 H16 N2 O3) FORMUL 3 NAD 2(C21 H27 N7 O14 P2) FORMUL 4 ADN 2(C10 H13 N5 O4) FORMUL 7 HOH *326(H2 O) HELIX 1 AA1 ASP A 11 GLY A 13 5 3 HELIX 2 AA2 LEU A 14 ASN A 27 1 14 HELIX 3 AA3 MET A 29 SER A 40 1 12 HELIX 4 AA4 THR A 57 LEU A 70 1 14 HELIX 5 AA5 GLN A 85 ALA A 95 1 11 HELIX 6 AA6 THR A 106 THR A 117 1 12 HELIX 7 AA7 GLY A 133 TYR A 143 1 11 HELIX 8 AA8 PRO A 144 ILE A 150 5 7 HELIX 9 AA9 THR A 157 ASN A 170 1 14 HELIX 10 AB1 SER A 183 LYS A 188 1 6 HELIX 11 AB2 PHE A 189 ASP A 208 1 20 HELIX 12 AB3 GLY A 222 PHE A 235 1 14 HELIX 13 AB4 ASP A 245 GLU A 255 1 11 HELIX 14 AB5 THR A 261 CYS A 266 1 6 HELIX 15 AB6 LEU A 283 GLU A 288 1 6 HELIX 16 AB7 ASP A 307 ALA A 315 1 9 HELIX 17 AB8 GLU A 341 ARG A 343 5 3 HELIX 18 AB9 LEU A 344 CYS A 349 1 6 HELIX 19 AC1 PRO A 354 HIS A 375 1 22 HELIX 20 AC2 PRO A 376 TYR A 379 5 4 HELIX 21 AC3 PRO A 387 GLY A 400 1 14 HELIX 22 AC4 THR A 410 GLY A 418 1 9 HELIX 23 AC5 ASP B 11 GLY B 13 5 3 HELIX 24 AC6 LEU B 14 GLU B 28 1 15 HELIX 25 AC7 MET B 29 SER B 40 1 12 HELIX 26 AC8 THR B 57 LEU B 70 1 14 HELIX 27 AC9 GLN B 85 ALA B 95 1 11 HELIX 28 AD1 THR B 106 THR B 117 1 12 HELIX 29 AD2 GLY B 133 LYS B 142 1 10 HELIX 30 AD3 LEU B 146 ILE B 150 5 5 HELIX 31 AD4 THR B 157 ASN B 170 1 14 HELIX 32 AD5 SER B 183 LYS B 188 1 6 HELIX 33 AD6 PHE B 189 ASP B 208 1 20 HELIX 34 AD7 GLY B 222 PHE B 235 1 14 HELIX 35 AD8 ASP B 245 MET B 254 1 10 HELIX 36 AD9 THR B 261 CYS B 266 1 6 HELIX 37 AE1 LEU B 283 GLU B 288 1 6 HELIX 38 AE2 ASP B 307 ALA B 315 1 9 HELIX 39 AE3 GLU B 341 ARG B 343 5 3 HELIX 40 AE4 LEU B 344 CYS B 349 1 6 HELIX 41 AE5 PRO B 354 HIS B 375 1 22 HELIX 42 AE6 PRO B 387 GLY B 400 1 14 HELIX 43 AE7 THR B 410 GLY B 418 1 9 SHEET 1 AA1 7 VAL A 99 TYR A 100 0 SHEET 2 AA1 7 GLU A 73 SER A 77 1 N TRP A 76 O TYR A 100 SHEET 3 AA1 7 ARG A 49 CYS A 53 1 N ILE A 50 O GLU A 73 SHEET 4 AA1 7 MET A 127 ASP A 130 1 O LEU A 129 N CYS A 53 SHEET 5 AA1 7 GLY A 152 GLU A 155 1 O SER A 154 N ASP A 130 SHEET 6 AA1 7 ALA A 177 ASN A 179 1 O ILE A 178 N ILE A 153 SHEET 7 AA1 7 VAL A 383 HIS A 384 1 O HIS A 384 N ALA A 177 SHEET 1 AA2 2 TYR A 119 PHE A 120 0 SHEET 2 AA2 2 GLY A 123 PRO A 124 -1 O GLY A 123 N PHE A 120 SHEET 1 AA3 8 GLU A 258 VAL A 259 0 SHEET 2 AA3 8 ARG A 238 THR A 242 1 N ILE A 241 O GLU A 258 SHEET 3 AA3 8 VAL A 215 ALA A 219 1 N ALA A 216 O ILE A 240 SHEET 4 AA3 8 ILE A 271 THR A 274 1 O ILE A 271 N VAL A 217 SHEET 5 AA3 8 ALA A 294 ASN A 298 1 O ILE A 295 N PHE A 272 SHEET 6 AA3 8 ARG A 335 LEU A 339 1 O ILE A 337 N VAL A 296 SHEET 7 AA3 8 VAL A 325 ARG A 329 -1 N ASP A 326 O LEU A 338 SHEET 8 AA3 8 GLU A 317 LYS A 322 -1 N VAL A 319 O ARG A 327 SHEET 1 AA4 7 VAL B 99 TYR B 100 0 SHEET 2 AA4 7 GLU B 73 SER B 77 1 N TRP B 76 O TYR B 100 SHEET 3 AA4 7 ARG B 49 CYS B 53 1 N GLY B 52 O GLN B 75 SHEET 4 AA4 7 MET B 127 ASP B 130 1 O MET B 127 N ALA B 51 SHEET 5 AA4 7 GLY B 152 GLU B 155 1 O SER B 154 N ASP B 130 SHEET 6 AA4 7 ALA B 177 ASN B 179 1 O ILE B 178 N ILE B 153 SHEET 7 AA4 7 VAL B 383 HIS B 384 1 O HIS B 384 N ASN B 179 SHEET 1 AA5 2 TYR B 119 PHE B 120 0 SHEET 2 AA5 2 GLY B 123 PRO B 124 -1 O GLY B 123 N PHE B 120 SHEET 1 AA6 8 GLU B 258 VAL B 259 0 SHEET 2 AA6 8 ARG B 238 THR B 242 1 N ILE B 241 O GLU B 258 SHEET 3 AA6 8 VAL B 215 ALA B 219 1 N ALA B 216 O ILE B 240 SHEET 4 AA6 8 ILE B 271 THR B 274 1 O ILE B 271 N VAL B 217 SHEET 5 AA6 8 ALA B 294 ASN B 298 1 O ILE B 295 N PHE B 272 SHEET 6 AA6 8 ARG B 335 LEU B 339 1 O ILE B 337 N VAL B 296 SHEET 7 AA6 8 VAL B 325 ARG B 329 -1 N TYR B 328 O ILE B 336 SHEET 8 AA6 8 GLU B 317 LYS B 322 -1 N VAL B 319 O ARG B 327 LINK C GLY A 400 N ALY A 401 1555 1555 1.33 LINK C ALY A 401 N LEU A 402 1555 1555 1.33 LINK C THR A 407 N ALY A 408 1555 1555 1.33 LINK C ALY A 408 N LEU A 409 1555 1555 1.33 LINK C GLY B 400 N ALY B 401 1555 1555 1.33 LINK C ALY B 401 N LEU B 402 1555 1555 1.33 LINK C THR B 407 N ALY B 408 1555 1555 1.33 LINK C ALY B 408 N LEU B 409 1555 1555 1.33 CISPEP 1 GLY A 423 PRO A 424 0 0.62 CISPEP 2 GLY B 423 PRO B 424 0 -1.37 SITE 1 AC1 31 THR A 157 THR A 158 THR A 159 ASN A 191 SITE 2 AC1 31 GLY A 220 GLY A 222 ASP A 223 VAL A 224 SITE 3 AC1 31 THR A 242 GLU A 243 ILE A 244 ASP A 245 SITE 4 AC1 31 ASN A 248 THR A 275 THR A 276 GLY A 277 SITE 5 AC1 31 CYS A 278 ILE A 281 ILE A 299 GLY A 300 SITE 6 AC1 31 HIS A 301 ASN A 346 HIS A 353 GLN A 413 SITE 7 AC1 31 LYS A 426 TYR A 430 ADN A 502 HOH A 658 SITE 8 AC1 31 HOH A 681 HOH A 685 HOH A 699 SITE 1 AC2 15 HIS A 55 THR A 57 GLU A 59 THR A 60 SITE 2 AC2 15 ASP A 131 GLU A 156 THR A 157 LYS A 186 SITE 3 AC2 15 ASP A 190 HIS A 301 MET A 351 HIS A 353 SITE 4 AC2 15 MET A 358 PHE A 362 NAD A 501 SITE 1 AC3 29 THR B 157 THR B 158 THR B 159 ASN B 191 SITE 2 AC3 29 GLY B 222 ASP B 223 VAL B 224 THR B 242 SITE 3 AC3 29 GLU B 243 ILE B 244 ASP B 245 ASN B 248 SITE 4 AC3 29 THR B 275 THR B 276 GLY B 277 CYS B 278 SITE 5 AC3 29 ILE B 281 ILE B 299 GLY B 300 HIS B 301 SITE 6 AC3 29 ASN B 346 HIS B 353 GLN B 413 LYS B 426 SITE 7 AC3 29 TYR B 430 ADN B 502 HOH B 657 HOH B 674 SITE 8 AC3 29 HOH B 682 SITE 1 AC4 15 HIS B 55 THR B 57 GLU B 59 THR B 60 SITE 2 AC4 15 ASP B 131 GLU B 156 THR B 157 LYS B 186 SITE 3 AC4 15 ASP B 190 HIS B 301 MET B 351 HIS B 353 SITE 4 AC4 15 MET B 358 PHE B 362 NAD B 501 CRYST1 98.366 102.727 176.160 90.00 90.00 90.00 I 2 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010166 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009735 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005677 0.00000