PDB Short entry for 4PI9 HEADER HYDROLASE 08-MAY-14 4PI9 TITLE CRYSTAL STRUCTURE OF S. AUREUS AUTOLYSIN E IN COMPLEX WITH MUROPEPTIDE TITLE 2 NAM-L-ALA-D-IGLU COMPND MOL_ID: 1; COMPND 2 MOLECULE: AUTOLYSIN E; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 35-258; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS (STRAIN MU50 / ATCC SOURCE 3 700699); SOURCE 4 ORGANISM_TAXID: 158878; SOURCE 5 STRAIN: MU50 / ATCC 700699; SOURCE 6 GENE: SAV2307; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS AUTOLYSIN, GLYCOSIDASE, PEPTIDOGLYCAN, MUROPEPTIDE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR M.MIHELIC,M.RENKO,D.TURK REVDAT 4 27-DEC-23 4PI9 1 REMARK REVDAT 3 18-APR-18 4PI9 1 JRNL REVDAT 2 08-MAR-17 4PI9 1 JRNL REVDAT 1 14-OCT-15 4PI9 0 JRNL AUTH M.MIHELIC,K.VLAHOVICEK-KAHLINA,M.RENKO,S.MESNAGE,A.DOBERSEK, JRNL AUTH 2 A.TALER-VERCIC,A.JAKAS,D.TURK JRNL TITL THE MECHANISM BEHIND THE SELECTION OF TWO DIFFERENT CLEAVAGE JRNL TITL 2 SITES IN NAG-NAM POLYMERS. JRNL REF IUCRJ V. 4 185 2017 JRNL REFN ESSN 2052-2525 JRNL PMID 28250957 JRNL DOI 10.1107/S2052252517000367 REMARK 2 REMARK 2 RESOLUTION. 1.48 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0071 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.48 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.75 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 37625 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.179 REMARK 3 R VALUE (WORKING SET) : 0.177 REMARK 3 FREE R VALUE : 0.209 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1981 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.48 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.52 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2594 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.96 REMARK 3 BIN R VALUE (WORKING SET) : 0.3010 REMARK 3 BIN FREE R VALUE SET COUNT : 137 REMARK 3 BIN FREE R VALUE : 0.3360 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1788 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 56 REMARK 3 SOLVENT ATOMS : 237 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 27.48 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.03 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.96000 REMARK 3 B22 (A**2) : -0.85000 REMARK 3 B33 (A**2) : -1.11000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.072 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.075 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.060 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.630 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.971 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.962 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1895 ; 0.015 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 1791 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2549 ; 1.708 ; 1.968 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4137 ; 1.002 ; 3.008 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 226 ; 5.437 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 96 ;35.574 ;25.313 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 355 ;14.359 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 9 ;12.200 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 269 ; 0.101 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2137 ; 0.009 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 438 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 895 ; 2.359 ; 2.614 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 893 ; 2.331 ; 2.608 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1115 ; 3.629 ; 3.902 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1115 ; 3.624 ; 3.902 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1000 ; 3.189 ; 2.921 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1001 ; 3.187 ; 2.920 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1432 ; 4.980 ; 4.225 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 2405 ; 7.740 ;22.020 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 2406 ; 7.739 ;22.021 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4PI9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-SEP-14. REMARK 100 THE DEPOSITION ID IS D_1000200742. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-JAN-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.918409 REMARK 200 MONOCHROMATOR : SI111-DCM WITH SAGITAL BENDER REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39606 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.480 REMARK 200 RESOLUTION RANGE LOW (A) : 38.750 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 6.400 REMARK 200 R MERGE (I) : 0.04400 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 20.1600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.48 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.53 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.3 REMARK 200 DATA REDUNDANCY IN SHELL : 6.50 REMARK 200 R MERGE FOR SHELL (I) : 0.74620 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.070 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.55 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.26 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2 M (NH4)2SO4, 2 M NACL, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 22.81300 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 36.71200 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 34.65600 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 36.71200 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 22.81300 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 34.65600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1260 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11360 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -89.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 31 REMARK 465 ALA A 32 REMARK 465 HIS A 79 REMARK 465 LYS A 80 REMARK 465 ASP A 81 REMARK 465 ASN A 82 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LYS A 73 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 599 O HOH A 614 2.07 REMARK 500 O HOH A 515 O HOH A 536 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 LYS A 73 CD LYS A 73 CE -0.154 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LYS A 73 CD - CE - NZ ANGL. DEV. = -21.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 107 45.37 -104.87 REMARK 500 GLU A 125 60.61 60.27 REMARK 500 LYS A 175 52.34 -95.21 REMARK 500 ASN A 215 66.47 27.71 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 308 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 309 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 310 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 3LT A 311 DBREF1 4PI9 A 35 258 UNP A0A0H3JT72_STAAM DBREF2 4PI9 A A0A0H3JT72 35 258 SEQADV 4PI9 SER A 31 UNP A0A0H3JT7 EXPRESSION TAG SEQADV 4PI9 ALA A 32 UNP A0A0H3JT7 EXPRESSION TAG SEQADV 4PI9 ALA A 33 UNP A0A0H3JT7 EXPRESSION TAG SEQADV 4PI9 ALA A 34 UNP A0A0H3JT7 EXPRESSION TAG SEQRES 1 A 228 SER ALA ALA ALA ASN ASP VAL ASN TYR SER PHE ASP GLU SEQRES 2 A 228 ALA VAL SER MET GLN GLN GLY LYS GLY ILE VAL GLN THR SEQRES 3 A 228 LYS GLU GLU ASP GLY LYS PHE VAL GLU ALA ASN ASN ASN SEQRES 4 A 228 GLU ILE ALA LYS ALA MET THR ILE SER HIS LYS ASP ASN SEQRES 5 A 228 ASP MET LYS TYR MET ASP ILE THR GLU LYS VAL PRO MET SEQRES 6 A 228 SER GLU SER GLU VAL ASN GLN LEU LEU LYS GLY LYS GLY SEQRES 7 A 228 ILE LEU GLU ASN ARG GLY LYS VAL PHE LEU GLU ALA GLN SEQRES 8 A 228 GLU LYS TYR GLU VAL ASN VAL ILE TYR LEU VAL SER HIS SEQRES 9 A 228 ALA LEU VAL GLU THR GLY ASN GLY LYS SER GLU LEU ALA SEQRES 10 A 228 LYS GLY ILE LYS ASP GLY LYS LYS ARG TYR TYR ASN PHE SEQRES 11 A 228 PHE GLY ILE GLY ALA PHE ASP SER SER ALA VAL ARG SER SEQRES 12 A 228 GLY LYS SER TYR ALA GLU LYS GLU GLN TRP THR SER PRO SEQRES 13 A 228 ASP LYS ALA ILE ILE GLY GLY ALA LYS PHE ILE ARG ASN SEQRES 14 A 228 GLU TYR PHE GLU ASN ASN GLN LEU ASN LEU TYR GLN MET SEQRES 15 A 228 ARG TRP ASN PRO GLU ASN PRO ALA GLN HIS GLN TYR ALA SEQRES 16 A 228 SER ASP ILE ARG TRP ALA ASP LYS ILE ALA LYS LEU MET SEQRES 17 A 228 ASP LYS SER TYR LYS GLN PHE GLY ILE LYS LYS ASP ASP SEQRES 18 A 228 ILE ARG GLN THR TYR TYR LYS HET SO4 A 301 5 HET SO4 A 302 5 HET SO4 A 303 5 HET CL A 304 1 HET CL A 305 1 HET CL A 306 1 HET CL A 307 1 HET CL A 308 1 HET CL A 309 1 HET CL A 310 1 HET 3LT A 311 34 HETNAM SO4 SULFATE ION HETNAM CL CHLORIDE ION HETNAM 3LT (4R)-4-[[(2S)-2-[[(2R)-2-[(2R,3S,4R,5R,6R)-5-ACETAMIDO- HETNAM 2 3LT 2-(HYDROXYMETHYL)-3,6-BIS(OXIDANYL)OXAN-4- HETNAM 3 3LT YL]OXYPROPANOYL]AMINO]PROPANOYL]AMINO]-5-AZANYL-5- HETNAM 4 3LT OXIDANYLIDENE-PENTANOIC ACID FORMUL 2 SO4 3(O4 S 2-) FORMUL 5 CL 7(CL 1-) FORMUL 12 3LT C19 H32 N4 O11 FORMUL 13 HOH *237(H2 O) HELIX 1 AA1 SER A 40 GLN A 49 1 10 HELIX 2 AA2 ASN A 67 THR A 76 1 10 HELIX 3 AA3 ASP A 83 MET A 87 5 5 HELIX 4 AA4 SER A 96 LYS A 105 1 10 HELIX 5 AA5 LYS A 107 GLU A 111 5 5 HELIX 6 AA6 ARG A 113 GLU A 125 1 13 HELIX 7 AA7 ASN A 127 GLY A 140 1 14 HELIX 8 AA8 GLU A 145 GLY A 149 5 5 HELIX 9 AA9 ASP A 167 GLY A 174 1 8 HELIX 10 AB1 SER A 176 GLU A 181 1 6 HELIX 11 AB2 SER A 185 TYR A 201 1 17 HELIX 12 AB3 PHE A 202 ASN A 205 5 4 HELIX 13 AB4 ASN A 208 ASN A 215 1 8 HELIX 14 AB5 ARG A 229 GLY A 246 1 18 SHEET 1 AA1 2 THR A 56 GLU A 59 0 SHEET 2 AA1 2 LYS A 62 GLU A 65 -1 O VAL A 64 N LYS A 57 SHEET 1 AA2 2 ILE A 150 ASP A 152 0 SHEET 2 AA2 2 LYS A 155 TYR A 157 -1 O LYS A 155 N ASP A 152 SITE 1 AC1 7 ALA A 225 SER A 226 ASP A 227 3LT A 311 SITE 2 AC1 7 HOH A 421 HOH A 450 HOH A 549 SITE 1 AC2 4 LYS A 115 LYS A 236 LYS A 258 HOH A 495 SITE 1 AC3 4 ILE A 252 ARG A 253 GLN A 254 THR A 255 SITE 1 AC4 1 ILE A 252 SITE 1 AC5 6 GLY A 106 GLY A 108 LYS A 143 LYS A 243 SITE 2 AC5 6 HOH A 632 HOH A 633 SITE 1 AC6 4 SER A 96 SER A 98 ASN A 218 HOH A 419 SITE 1 AC7 2 VAL A 54 HOH A 554 SITE 1 AC8 3 ALA A 74 LYS A 85 TRP A 214 SITE 1 AC9 3 TYR A 256 TYR A 257 HOH A 550 SITE 1 AD1 5 HIS A 134 GLU A 138 PHE A 161 TYR A 224 SITE 2 AD1 5 TRP A 230 SITE 1 AD2 11 GLY A 162 ILE A 163 GLY A 164 PHE A 196 SITE 2 AD2 11 TYR A 201 GLN A 223 TYR A 224 SO4 A 301 SITE 3 AD2 11 HOH A 402 HOH A 418 HOH A 466 CRYST1 45.626 69.312 73.424 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021917 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014428 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013620 0.00000