PDB Short entry for 4PMI HEADER RNA BINDING PROTEIN/RNA 21-MAY-14 4PMI TITLE CRYSTAL STRUCTURE OF REV AND REV-RESPONSE-ELEMENT RNA COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: REV-RESPONSE-ELEMENT RNA; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: PROTEIN REV; COMPND 7 CHAIN: B, C; COMPND 8 SYNONYM: ART/TRS,ANTI-REPRESSION TRANSACTIVATOR,REGULATOR OF COMPND 9 EXPRESSION OF VIRAL PROTEINS; COMPND 10 ENGINEERED: YES; COMPND 11 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: HUMAN IMMUNODEFICIENCY VIRUS 1; SOURCE 4 ORGANISM_TAXID: 11676; SOURCE 5 MOL_ID: 2; SOURCE 6 ORGANISM_SCIENTIFIC: HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 GROUP M SOURCE 7 SUBTYPE B; SOURCE 8 ORGANISM_COMMON: HIV-1; SOURCE 9 ORGANISM_TAXID: 11707; SOURCE 10 STRAIN: ISOLATE HXB3; SOURCE 11 GENE: REV; SOURCE 12 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 13 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PROTEIN-RNA COMPLEX, HELIX-LOOP-HELIX, HIV, NUCLEAR EXPORT, RNA KEYWDS 2 BINDING PROTEIN-RNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR B.JAYARAMAN,D.C.CROSBY,C.HOMER,I.RIBEIRO,D.MAVOR,A.D.FRANKEL REVDAT 7 27-SEP-23 4PMI 1 REMARK REVDAT 6 25-DEC-19 4PMI 1 REMARK REVDAT 5 13-FEB-19 4PMI 1 SOURCE REVDAT 4 20-SEP-17 4PMI 1 SOURCE REMARK REVDAT 3 04-MAR-15 4PMI 1 JRNL REVDAT 2 21-JAN-15 4PMI 1 JRNL REVDAT 1 24-DEC-14 4PMI 0 JRNL AUTH B.JAYARAMAN,D.C.CROSBY,C.HOMER,I.RIBEIRO,D.MAVOR,A.D.FRANKEL JRNL TITL RNA-DIRECTED REMODELING OF THE HIV-1 PROTEIN REV JRNL TITL 2 ORCHESTRATES ASSEMBLY OF THE REV-REV RESPONSE ELEMENT JRNL TITL 3 COMPLEX. JRNL REF ELIFE V. 4 04120 2014 JRNL REFN ESSN 2050-084X JRNL PMID 25486594 JRNL DOI 10.7554/ELIFE.04120 REMARK 2 REMARK 2 RESOLUTION. 3.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.85 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.990 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 13242 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.195 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.211 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.010 REMARK 3 FREE R VALUE TEST SET COUNT : 1325 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.8507 - 6.6507 1.00 1457 163 0.1670 0.1873 REMARK 3 2 6.6507 - 5.2814 1.00 1359 150 0.2027 0.2243 REMARK 3 3 5.2814 - 4.6145 1.00 1327 148 0.1723 0.1754 REMARK 3 4 4.6145 - 4.1929 1.00 1326 148 0.1744 0.1887 REMARK 3 5 4.1929 - 3.8925 1.00 1299 143 0.2064 0.2424 REMARK 3 6 3.8925 - 3.6631 1.00 1298 145 0.2239 0.2244 REMARK 3 7 3.6631 - 3.4797 1.00 1287 143 0.2139 0.2283 REMARK 3 8 3.4797 - 3.3283 1.00 1296 144 0.2493 0.2977 REMARK 3 9 3.3283 - 3.2002 0.98 1268 141 0.2788 0.3014 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.290 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.980 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 91.89 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 114.7 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 1832 REMARK 3 ANGLE : 0.394 2668 REMARK 3 CHIRALITY : 0.020 321 REMARK 3 PLANARITY : 0.002 198 REMARK 3 DIHEDRAL : 11.911 828 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 36 THROUGH 48 ) REMARK 3 ORIGIN FOR THE GROUP (A): -36.6385 -21.1849 16.8382 REMARK 3 T TENSOR REMARK 3 T11: 0.8587 T22: 1.3614 REMARK 3 T33: 0.7596 T12: -0.1781 REMARK 3 T13: 0.0238 T23: -0.3064 REMARK 3 L TENSOR REMARK 3 L11: 5.9628 L22: 2.9521 REMARK 3 L33: 5.0549 L12: 0.6640 REMARK 3 L13: -4.7364 L23: -0.5357 REMARK 3 S TENSOR REMARK 3 S11: 0.5162 S12: 0.2333 S13: 0.0002 REMARK 3 S21: 0.7798 S22: 0.2765 S23: -0.9213 REMARK 3 S31: -0.6859 S32: 0.8554 S33: -0.8166 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 49 THROUGH 70 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.0085 -34.6927 8.5952 REMARK 3 T TENSOR REMARK 3 T11: 0.8460 T22: 1.6506 REMARK 3 T33: 1.9737 T12: 0.1401 REMARK 3 T13: 0.1544 T23: -0.5743 REMARK 3 L TENSOR REMARK 3 L11: 8.6077 L22: 6.6123 REMARK 3 L33: 4.9332 L12: -1.0455 REMARK 3 L13: -6.4085 L23: 2.4520 REMARK 3 S TENSOR REMARK 3 S11: -0.2770 S12: -1.4189 S13: -0.3089 REMARK 3 S21: 0.4247 S22: 0.4376 S23: -0.5536 REMARK 3 S31: -0.4295 S32: 0.0826 S33: -0.1077 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 71 THROUGH 82 ) REMARK 3 ORIGIN FOR THE GROUP (A): -36.0927 -21.0449 20.3169 REMARK 3 T TENSOR REMARK 3 T11: 0.7904 T22: 1.2293 REMARK 3 T33: 0.6216 T12: 0.0463 REMARK 3 T13: -0.0524 T23: -0.2502 REMARK 3 L TENSOR REMARK 3 L11: 7.1021 L22: 8.1060 REMARK 3 L33: 1.4537 L12: -4.6974 REMARK 3 L13: -3.1772 L23: 1.7373 REMARK 3 S TENSOR REMARK 3 S11: 0.0840 S12: -0.2906 S13: 0.5187 REMARK 3 S21: 0.2731 S22: 0.5792 S23: -1.2890 REMARK 3 S31: -0.3141 S32: 0.5393 S33: -0.6119 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 11 THROUGH 24 ) REMARK 3 ORIGIN FOR THE GROUP (A): -46.1605 -38.4943 -6.2728 REMARK 3 T TENSOR REMARK 3 T11: 0.6473 T22: 1.5830 REMARK 3 T33: 1.2053 T12: 0.2545 REMARK 3 T13: -0.1776 T23: -0.5636 REMARK 3 L TENSOR REMARK 3 L11: 4.8165 L22: 0.8087 REMARK 3 L33: 5.9016 L12: -0.2113 REMARK 3 L13: 2.9096 L23: -1.8787 REMARK 3 S TENSOR REMARK 3 S11: 0.9456 S12: 1.4056 S13: -0.2351 REMARK 3 S21: -0.1400 S22: -0.2332 S23: 0.2273 REMARK 3 S31: -0.4873 S32: -1.0491 S33: -0.8083 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 25 THROUGH 34 ) REMARK 3 ORIGIN FOR THE GROUP (A): -29.2858 -24.9921 -0.2573 REMARK 3 T TENSOR REMARK 3 T11: 1.0398 T22: 1.7411 REMARK 3 T33: 1.6660 T12: -0.4529 REMARK 3 T13: 0.4726 T23: -0.1977 REMARK 3 L TENSOR REMARK 3 L11: 9.7918 L22: 7.4950 REMARK 3 L33: 3.9170 L12: 8.0462 REMARK 3 L13: 5.0638 L23: 3.3126 REMARK 3 S TENSOR REMARK 3 S11: -0.4821 S12: 2.8323 S13: 3.8022 REMARK 3 S21: -1.5642 S22: 2.0005 S23: 0.5594 REMARK 3 S31: -1.0796 S32: 3.1964 S33: -1.0726 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 35 THROUGH 63 ) REMARK 3 ORIGIN FOR THE GROUP (A): -34.8980 -36.2987 4.1596 REMARK 3 T TENSOR REMARK 3 T11: 0.6619 T22: 1.2575 REMARK 3 T33: 1.2163 T12: 0.0612 REMARK 3 T13: 0.2556 T23: -0.4537 REMARK 3 L TENSOR REMARK 3 L11: 2.3974 L22: 5.6605 REMARK 3 L33: 5.6070 L12: -3.3708 REMARK 3 L13: 0.7971 L23: 1.3134 REMARK 3 S TENSOR REMARK 3 S11: -0.1181 S12: 0.5987 S13: -1.2353 REMARK 3 S21: 0.1599 S22: 0.3482 S23: 0.5305 REMARK 3 S31: 0.1636 S32: 0.8768 S33: -0.2840 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 13 THROUGH 25 ) REMARK 3 ORIGIN FOR THE GROUP (A): -50.6644 -40.6474 8.8384 REMARK 3 T TENSOR REMARK 3 T11: 0.6639 T22: 1.3358 REMARK 3 T33: 1.3699 T12: -0.1725 REMARK 3 T13: 0.2757 T23: -0.2364 REMARK 3 L TENSOR REMARK 3 L11: 9.9372 L22: 4.5668 REMARK 3 L33: 7.3562 L12: 1.8573 REMARK 3 L13: -0.5626 L23: -3.3708 REMARK 3 S TENSOR REMARK 3 S11: -0.1487 S12: 1.0583 S13: -1.5694 REMARK 3 S21: -0.1866 S22: 0.9783 S23: 0.6564 REMARK 3 S31: 0.8054 S32: -0.4270 S33: -0.8914 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 26 THROUGH 34 ) REMARK 3 ORIGIN FOR THE GROUP (A): -38.2656 -34.4237 25.4474 REMARK 3 T TENSOR REMARK 3 T11: 0.8629 T22: 1.3431 REMARK 3 T33: 0.8018 T12: 0.0765 REMARK 3 T13: -0.0727 T23: 0.0147 REMARK 3 L TENSOR REMARK 3 L11: 4.9131 L22: 3.8483 REMARK 3 L33: 1.9234 L12: 1.3067 REMARK 3 L13: -0.2282 L23: -2.6603 REMARK 3 S TENSOR REMARK 3 S11: 0.0570 S12: -2.4735 S13: -2.1430 REMARK 3 S21: -0.3799 S22: -1.2082 S23: -0.2664 REMARK 3 S31: -0.3807 S32: 0.4003 S33: 0.5391 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 35 THROUGH 64 ) REMARK 3 ORIGIN FOR THE GROUP (A): -44.3764 -29.5064 13.6319 REMARK 3 T TENSOR REMARK 3 T11: 0.5351 T22: 0.9684 REMARK 3 T33: 1.0017 T12: 0.0698 REMARK 3 T13: 0.2291 T23: -0.0422 REMARK 3 L TENSOR REMARK 3 L11: 9.6977 L22: 4.6520 REMARK 3 L33: 10.0776 L12: -0.3396 REMARK 3 L13: 7.7243 L23: 2.1311 REMARK 3 S TENSOR REMARK 3 S11: -0.2050 S12: -0.5089 S13: 0.1504 REMARK 3 S21: 0.0782 S22: -0.0249 S23: 0.3058 REMARK 3 S31: -0.3739 S32: -0.3481 S33: 0.1616 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4PMI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-MAY-14. REMARK 100 THE DEPOSITION ID IS D_1000201586. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-NOV-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.3.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.115869 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13246 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.200 REMARK 200 RESOLUTION RANGE LOW (A) : 45.850 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 25.90 REMARK 200 R MERGE (I) : 0.11500 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 23.4700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.31 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.4 REMARK 200 DATA REDUNDANCY IN SHELL : 15.90 REMARK 200 R MERGE FOR SHELL (I) : 2.01400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.740 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER, SHELXD REMARK 200 STARTING MODEL: 3LPH, 1ETF REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 80.39 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 6.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50 MM MES PH 6.0, 50 MM KCL, 1-4% PEG REMARK 280 4000,, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 13555 Y+3/4,X+1/4,-Z+1/4 REMARK 290 14555 -Y+3/4,-X+3/4,-Z+3/4 REMARK 290 15555 Y+1/4,-X+1/4,Z+3/4 REMARK 290 16555 -Y+1/4,X+3/4,Z+1/4 REMARK 290 17555 X+3/4,Z+1/4,-Y+1/4 REMARK 290 18555 -X+1/4,Z+3/4,Y+1/4 REMARK 290 19555 -X+3/4,-Z+3/4,-Y+3/4 REMARK 290 20555 X+1/4,-Z+1/4,Y+3/4 REMARK 290 21555 Z+3/4,Y+1/4,-X+1/4 REMARK 290 22555 Z+1/4,-Y+1/4,X+3/4 REMARK 290 23555 -Z+1/4,Y+3/4,X+1/4 REMARK 290 24555 -Z+3/4,-Y+3/4,-X+3/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 82.65000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 82.65000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 82.65000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 82.65000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 82.65000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 82.65000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 82.65000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 82.65000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 82.65000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 82.65000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 82.65000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 82.65000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 82.65000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 82.65000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 82.65000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 82.65000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 82.65000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 82.65000 REMARK 290 SMTRY1 13 0.000000 1.000000 0.000000 123.97500 REMARK 290 SMTRY2 13 1.000000 0.000000 0.000000 41.32500 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 41.32500 REMARK 290 SMTRY1 14 0.000000 -1.000000 0.000000 123.97500 REMARK 290 SMTRY2 14 -1.000000 0.000000 0.000000 123.97500 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 123.97500 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 41.32500 REMARK 290 SMTRY2 15 -1.000000 0.000000 0.000000 41.32500 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 123.97500 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 41.32500 REMARK 290 SMTRY2 16 1.000000 0.000000 0.000000 123.97500 REMARK 290 SMTRY3 16 0.000000 0.000000 1.000000 41.32500 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 123.97500 REMARK 290 SMTRY2 17 0.000000 0.000000 1.000000 41.32500 REMARK 290 SMTRY3 17 0.000000 -1.000000 0.000000 41.32500 REMARK 290 SMTRY1 18 -1.000000 0.000000 0.000000 41.32500 REMARK 290 SMTRY2 18 0.000000 0.000000 1.000000 123.97500 REMARK 290 SMTRY3 18 0.000000 1.000000 0.000000 41.32500 REMARK 290 SMTRY1 19 -1.000000 0.000000 0.000000 123.97500 REMARK 290 SMTRY2 19 0.000000 0.000000 -1.000000 123.97500 REMARK 290 SMTRY3 19 0.000000 -1.000000 0.000000 123.97500 REMARK 290 SMTRY1 20 1.000000 0.000000 0.000000 41.32500 REMARK 290 SMTRY2 20 0.000000 0.000000 -1.000000 41.32500 REMARK 290 SMTRY3 20 0.000000 1.000000 0.000000 123.97500 REMARK 290 SMTRY1 21 0.000000 0.000000 1.000000 123.97500 REMARK 290 SMTRY2 21 0.000000 1.000000 0.000000 41.32500 REMARK 290 SMTRY3 21 -1.000000 0.000000 0.000000 41.32500 REMARK 290 SMTRY1 22 0.000000 0.000000 1.000000 41.32500 REMARK 290 SMTRY2 22 0.000000 -1.000000 0.000000 41.32500 REMARK 290 SMTRY3 22 1.000000 0.000000 0.000000 123.97500 REMARK 290 SMTRY1 23 0.000000 0.000000 -1.000000 41.32500 REMARK 290 SMTRY2 23 0.000000 1.000000 0.000000 123.97500 REMARK 290 SMTRY3 23 1.000000 0.000000 0.000000 41.32500 REMARK 290 SMTRY1 24 0.000000 0.000000 -1.000000 123.97500 REMARK 290 SMTRY2 24 0.000000 -1.000000 0.000000 123.97500 REMARK 290 SMTRY3 24 -1.000000 0.000000 0.000000 123.97500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: NONAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: NONAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 16980 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 32400 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -141.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 0.000000 1.000000 -82.65000 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 -82.65000 REMARK 350 BIOMT3 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 -1.000000 0.000000 -82.65000 REMARK 350 BIOMT2 3 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT3 3 1.000000 0.000000 0.000000 82.65000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: OCTADECAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 37720 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 61030 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -329.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 0.000000 1.000000 -82.65000 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 -82.65000 REMARK 350 BIOMT3 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 -1.000000 0.000000 -82.65000 REMARK 350 BIOMT2 3 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT3 3 1.000000 0.000000 0.000000 82.65000 REMARK 350 BIOMT1 4 0.000000 1.000000 0.000000 -41.32500 REMARK 350 BIOMT2 4 1.000000 0.000000 0.000000 41.32500 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 41.32500 REMARK 350 BIOMT1 5 -1.000000 0.000000 0.000000 -123.97500 REMARK 350 BIOMT2 5 0.000000 0.000000 1.000000 -41.32500 REMARK 350 BIOMT3 5 0.000000 1.000000 0.000000 41.32500 REMARK 350 BIOMT1 6 0.000000 0.000000 -1.000000 -41.32500 REMARK 350 BIOMT2 6 0.000000 -1.000000 0.000000 -41.32500 REMARK 350 BIOMT3 6 -1.000000 0.000000 0.000000 -41.32500 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY B -1 REMARK 465 ALA B 0 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 GLY B 3 REMARK 465 ARG B 4 REMARK 465 SER B 5 REMARK 465 GLY B 6 REMARK 465 ASP B 7 REMARK 465 SER B 8 REMARK 465 ASP B 9 REMARK 465 GLU B 10 REMARK 465 LEU B 64 REMARK 465 GLY B 65 REMARK 465 ARG B 66 REMARK 465 SER B 67 REMARK 465 ALA B 68 REMARK 465 GLU B 69 REMARK 465 PRO B 70 REMARK 465 GLY C -1 REMARK 465 ALA C 0 REMARK 465 MET C 1 REMARK 465 ALA C 2 REMARK 465 GLY C 3 REMARK 465 ARG C 4 REMARK 465 SER C 5 REMARK 465 GLY C 6 REMARK 465 ASP C 7 REMARK 465 SER C 8 REMARK 465 ASP C 9 REMARK 465 GLU C 10 REMARK 465 ASP C 11 REMARK 465 SER C 12 REMARK 465 GLY C 65 REMARK 465 ARG C 66 REMARK 465 SER C 67 REMARK 465 ALA C 68 REMARK 465 GLU C 69 REMARK 465 PRO C 70 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 A A 68 N9 C8 N7 C5 C6 N6 N1 REMARK 470 A A 68 C2 N3 C4 REMARK 470 LEU B 13 CG CD1 CD2 REMARK 470 LYS B 14 CD CE NZ REMARK 470 ARG B 17 NE CZ NH1 NH2 REMARK 470 LYS B 20 CD CE NZ REMARK 470 GLN B 24 CG CD OE1 NE2 REMARK 470 ARG B 42 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 46 CG CD NE CZ NH1 NH2 REMARK 470 TYR B 63 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS C 14 CD CE NZ REMARK 470 GLU C 32 CG CD OE1 OE2 REMARK 470 ARG C 35 CG CD NE CZ NH1 NH2 REMARK 470 LEU C 64 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OP2 G A 36 O3 PO4 A 101 1.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR C 62 -156.95 -103.89 REMARK 500 TYR C 63 -6.97 63.56 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 A 101 DBREF 4PMI A 36 82 PDB 4PMI 4PMI 36 82 DBREF 4PMI B 1 70 UNP P69718 REV_HV1H3 1 70 DBREF 4PMI C 1 70 UNP P69718 REV_HV1H3 1 70 SEQADV 4PMI GLY B -1 UNP P69718 EXPRESSION TAG SEQADV 4PMI ALA B 0 UNP P69718 EXPRESSION TAG SEQADV 4PMI SER B 12 UNP P69718 LEU 12 ENGINEERED MUTATION SEQADV 4PMI ALA B 47 UNP P69718 GLU 47 ENGINEERED MUTATION SEQADV 4PMI ARG B 60 UNP P69718 LEU 60 ENGINEERED MUTATION SEQADV 4PMI GLY C -1 UNP P69718 EXPRESSION TAG SEQADV 4PMI ALA C 0 UNP P69718 EXPRESSION TAG SEQADV 4PMI SER C 12 UNP P69718 LEU 12 ENGINEERED MUTATION SEQADV 4PMI ALA C 47 UNP P69718 GLU 47 ENGINEERED MUTATION SEQADV 4PMI ARG C 60 UNP P69718 LEU 60 ENGINEERED MUTATION SEQRES 1 A 40 G G G A G U A U A U G G G SEQRES 2 A 40 C G C A C U U C G G U G A SEQRES 3 A 40 C G G U A C A G G C U C C SEQRES 4 A 40 U SEQRES 1 B 72 GLY ALA MET ALA GLY ARG SER GLY ASP SER ASP GLU ASP SEQRES 2 B 72 SER LEU LYS ALA VAL ARG LEU ILE LYS PHE LEU TYR GLN SEQRES 3 B 72 SER ASN PRO PRO PRO ASN PRO GLU GLY THR ARG GLN ALA SEQRES 4 B 72 ARG ARG ASN ARG ARG ARG ARG TRP ARG ALA ARG GLN ARG SEQRES 5 B 72 GLN ILE HIS SER ILE SER GLU ARG ILE ARG SER THR TYR SEQRES 6 B 72 LEU GLY ARG SER ALA GLU PRO SEQRES 1 C 72 GLY ALA MET ALA GLY ARG SER GLY ASP SER ASP GLU ASP SEQRES 2 C 72 SER LEU LYS ALA VAL ARG LEU ILE LYS PHE LEU TYR GLN SEQRES 3 C 72 SER ASN PRO PRO PRO ASN PRO GLU GLY THR ARG GLN ALA SEQRES 4 C 72 ARG ARG ASN ARG ARG ARG ARG TRP ARG ALA ARG GLN ARG SEQRES 5 C 72 GLN ILE HIS SER ILE SER GLU ARG ILE ARG SER THR TYR SEQRES 6 C 72 LEU GLY ARG SER ALA GLU PRO HET PO4 A 101 5 HETNAM PO4 PHOSPHATE ION FORMUL 4 PO4 O4 P 3- FORMUL 5 HOH *(H2 O) HELIX 1 AA1 ASP B 11 SER B 25 1 15 HELIX 2 AA2 THR B 34 THR B 62 1 29 HELIX 3 AA3 LYS C 14 SER C 25 1 12 HELIX 4 AA4 THR C 34 THR C 62 1 29 LINK P G A 36 O3 PO4 A 101 1555 1555 1.61 SITE 1 AC1 2 G A 36 ARG C 39 CRYST1 165.300 165.300 165.300 90.00 90.00 90.00 P 41 3 2 48 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006050 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006050 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006050 0.00000