PDB Short entry for 4Q28 HEADER STRUCTURAL PROTEIN 07-APR-14 4Q28 TITLE CRYSTAL STRUCTURE OF THE PLECTIN 1 AND 2 REPEATS OF THE HUMAN TITLE 2 PERIPLAKIN. NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG) TARGET TITLE 3 HR9083A COMPND MOL_ID: 1; COMPND 2 MOLECULE: PERIPLAKIN; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: UNP RESIDUES 1655-1756; COMPND 5 SYNONYM: 190 KDA PARANEOPLASTIC PEMPHIGUS ANTIGEN, 195 KDA CORNIFIED COMPND 6 ENVELOPE PRECURSOR PROTEIN; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: KIAA0568, PPL; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)+ MAGIC; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PET15_NESG; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: HR9083A-1655-1756-15.6 KEYWDS STRUCTURAL GENOMICS, PSI-BIOLOGY, PROTEIN STRUCTURE INITIATIVE, KEYWDS 2 NORTHEAST STRUCTURAL GENOMICS CONSORTIUM, NESG, PERIPLAKIN, PLECTIN, KEYWDS 3 STRUCTURAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.VOROBIEV,S.LEW,J.SEETHARAMAN,H.JANJUA,R.XIAO,P.T.O'CONNELL, AUTHOR 2 M.MAGLAQUI,D.WANG,J.K.EVERETT,T.B.ACTON,G.T.MONTELIONE,L.TONG, AUTHOR 3 J.F.HUNT,NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG) REVDAT 1 18-JUN-14 4Q28 0 JRNL AUTH S.VOROBIEV,S.LEW,J.SEETHARAMAN,H.JANJUA,R.XIAO, JRNL AUTH 2 P.T.O'CONNELL,M.MAGLAQUI,D.WANG,J.K.EVERETT,T.B.ACTON, JRNL AUTH 3 G.T.MONTELIONE,L.TONG,J.F.HUNT JRNL TITL CRYSTAL STRUCTURE OF THE PLECTIN 1 AND 2 REPEATS OF HUMAN JRNL TITL 2 PERIPLAKIN. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.64 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7.2_869) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE- REMARK 3 : KUNSTLEVE,LI-WEI HUNG,ROBERT IMMORMINO, REMARK 3 : TOM IOERGER,AIRLIE MCCOY,ERIK MCKEE,NIGEL REMARK 3 : MORIARTY,REETAL PAI,RANDY READ,JANE REMARK 3 : RICHARDSON,DAVID RICHARDSON,TOD ROMO,JIM REMARK 3 : SACCHETTINI,NICHOLAS SAUTER,JACOB SMITH, REMARK 3 : LAURENT STORONI,TOM TERWILLIGER,PETER REMARK 3 : ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.64 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.12 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.300 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 29272 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.216 REMARK 3 R VALUE (WORKING SET) : 0.214 REMARK 3 FREE R VALUE : 0.257 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 1470 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 34.1210 - 5.6800 1.00 2780 145 0.1770 0.1980 REMARK 3 2 5.6800 - 4.5120 1.00 2833 120 0.1500 0.1560 REMARK 3 3 4.5120 - 3.9420 1.00 2772 169 0.1660 0.2200 REMARK 3 4 3.9420 - 3.5820 0.96 2653 142 0.2450 0.2890 REMARK 3 5 3.5820 - 3.3260 0.99 2819 158 0.2370 0.3170 REMARK 3 6 3.3260 - 3.1300 1.00 2787 134 0.2580 0.3490 REMARK 3 7 3.1300 - 2.9730 1.00 2791 140 0.2780 0.3090 REMARK 3 8 2.9730 - 2.8440 1.00 2757 170 0.3010 0.3210 REMARK 3 9 2.8440 - 2.7340 1.00 2812 136 0.3260 0.4300 REMARK 3 10 2.7340 - 2.6400 1.00 2798 156 0.3800 0.4720 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.00 REMARK 3 SHRINKAGE RADIUS : 0.73 REMARK 3 K_SOL : 0.28 REMARK 3 B_SOL : 29.59 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.910 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.310 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 61.62 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 73.58 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 4.27300 REMARK 3 B22 (A**2) : 4.27300 REMARK 3 B33 (A**2) : -8.54600 REMARK 3 B12 (A**2) : -0.00000 REMARK 3 B13 (A**2) : -0.00000 REMARK 3 B23 (A**2) : -0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 3608 REMARK 3 ANGLE : 1.330 4858 REMARK 3 CHIRALITY : 0.095 504 REMARK 3 PLANARITY : 0.006 638 REMARK 3 DIHEDRAL : 16.913 1354 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: chain A REMARK 3 ORIGIN FOR THE GROUP (A): 22.5413 18.1062 17.8701 REMARK 3 T TENSOR REMARK 3 T11: 0.3632 T22: 0.4228 REMARK 3 T33: 0.3955 T12: 0.1118 REMARK 3 T13: 0.0223 T23: 0.0334 REMARK 3 L TENSOR REMARK 3 L11: -0.0620 L22: 0.2932 REMARK 3 L33: 0.4895 L12: -0.3711 REMARK 3 L13: 0.6808 L23: 0.0119 REMARK 3 S TENSOR REMARK 3 S11: -0.0571 S12: -0.0247 S13: -0.0809 REMARK 3 S21: 0.0489 S22: -0.0413 S23: 0.2083 REMARK 3 S31: 0.0490 S32: 0.0500 S33: 0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: chain B REMARK 3 ORIGIN FOR THE GROUP (A): 30.9352 36.9017 19.0295 REMARK 3 T TENSOR REMARK 3 T11: 0.3590 T22: 0.4612 REMARK 3 T33: 0.4305 T12: 0.1079 REMARK 3 T13: 0.0115 T23: -0.0614 REMARK 3 L TENSOR REMARK 3 L11: 0.5222 L22: 0.0714 REMARK 3 L33: 0.6071 L12: -0.2362 REMARK 3 L13: 0.1345 L23: 0.2614 REMARK 3 S TENSOR REMARK 3 S11: 0.1165 S12: -0.0951 S13: 0.1853 REMARK 3 S21: -0.1673 S22: -0.0647 S23: -0.2730 REMARK 3 S31: -0.1771 S32: 0.0703 S33: 0.0000 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: chain C REMARK 3 ORIGIN FOR THE GROUP (A): 33.8978 47.1866 8.6849 REMARK 3 T TENSOR REMARK 3 T11: 0.3320 T22: 0.5299 REMARK 3 T33: 0.4187 T12: 0.0666 REMARK 3 T13: -0.0161 T23: -0.0709 REMARK 3 L TENSOR REMARK 3 L11: 0.1331 L22: 1.1530 REMARK 3 L33: 0.0610 L12: -0.5903 REMARK 3 L13: -0.4409 L23: -0.3943 REMARK 3 S TENSOR REMARK 3 S11: -0.1097 S12: -0.1832 S13: 0.0799 REMARK 3 S21: 0.0867 S22: 0.0823 S23: -0.1400 REMARK 3 S31: -0.1348 S32: 0.1148 S33: 0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: chain D REMARK 3 ORIGIN FOR THE GROUP (A): 11.4267 12.6613 9.7448 REMARK 3 T TENSOR REMARK 3 T11: 0.3926 T22: 0.4774 REMARK 3 T33: 0.4240 T12: 0.1107 REMARK 3 T13: 0.0254 T23: 0.0548 REMARK 3 L TENSOR REMARK 3 L11: 0.9266 L22: 0.5050 REMARK 3 L33: 0.1010 L12: 0.2047 REMARK 3 L13: 0.1523 L23: 0.1507 REMARK 3 S TENSOR REMARK 3 S11: 0.0176 S12: -0.2609 S13: -0.0630 REMARK 3 S21: 0.0219 S22: 0.0998 S23: 0.1279 REMARK 3 S31: 0.0743 S32: 0.0569 S33: -0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4Q28 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-APR-14. REMARK 100 THE RCSB ID CODE IS RCSB085511. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-MAR-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X4C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97900 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29474 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.640 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 11.000 REMARK 200 R MERGE (I) : 0.11400 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 22.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.64 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.73 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 8.80 REMARK 200 R MERGE FOR SHELL (I) : 0.85700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.98 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.46 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN SOLUTION: 100MM NACL, 5MM DTT, REMARK 280 0.02% NAN3, 10MM TRIS-HCL (PH 7.5). RESERVOIR SOLUTION: 40% PEG REMARK 280 1000, 0.1M MAGNESIUM NITRATE, 0.1M TAPS, PH 9.0, MICROBATCH REMARK 280 CRYSTALLIZATION UNDER OIL, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 64.19567 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 128.39133 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 128.39133 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 64.19567 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 1644 REMARK 465 GLN A 1755 REMARK 465 LYS A 1756 REMARK 465 MSE B 1644 REMARK 465 GLN B 1755 REMARK 465 LYS B 1756 REMARK 465 MSE C 1644 REMARK 465 GLY C 1754 REMARK 465 GLN C 1755 REMARK 465 LYS C 1756 REMARK 465 MSE D 1644 REMARK 465 GLY D 1754 REMARK 465 GLN D 1755 REMARK 465 LYS D 1756 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A1664 -64.91 -100.20 REMARK 500 ASP B1664 -65.40 -91.89 REMARK 500 ASN D1704 -77.52 -96.46 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B1803 DISTANCE = 6.67 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: NESG-HR9083A RELATED DB: TARGETTRACK DBREF 4Q28 A 1655 1756 UNP O60437 PEPL_HUMAN 1655 1756 DBREF 4Q28 B 1655 1756 UNP O60437 PEPL_HUMAN 1655 1756 DBREF 4Q28 C 1655 1756 UNP O60437 PEPL_HUMAN 1655 1756 DBREF 4Q28 D 1655 1756 UNP O60437 PEPL_HUMAN 1655 1756 SEQADV 4Q28 MSE A 1644 UNP O60437 EXPRESSION TAG SEQADV 4Q28 GLY A 1645 UNP O60437 EXPRESSION TAG SEQADV 4Q28 HIS A 1646 UNP O60437 EXPRESSION TAG SEQADV 4Q28 HIS A 1647 UNP O60437 EXPRESSION TAG SEQADV 4Q28 HIS A 1648 UNP O60437 EXPRESSION TAG SEQADV 4Q28 HIS A 1649 UNP O60437 EXPRESSION TAG SEQADV 4Q28 HIS A 1650 UNP O60437 EXPRESSION TAG SEQADV 4Q28 HIS A 1651 UNP O60437 EXPRESSION TAG SEQADV 4Q28 SER A 1652 UNP O60437 EXPRESSION TAG SEQADV 4Q28 HIS A 1653 UNP O60437 EXPRESSION TAG SEQADV 4Q28 MSE A 1654 UNP O60437 EXPRESSION TAG SEQADV 4Q28 MSE B 1644 UNP O60437 EXPRESSION TAG SEQADV 4Q28 GLY B 1645 UNP O60437 EXPRESSION TAG SEQADV 4Q28 HIS B 1646 UNP O60437 EXPRESSION TAG SEQADV 4Q28 HIS B 1647 UNP O60437 EXPRESSION TAG SEQADV 4Q28 HIS B 1648 UNP O60437 EXPRESSION TAG SEQADV 4Q28 HIS B 1649 UNP O60437 EXPRESSION TAG SEQADV 4Q28 HIS B 1650 UNP O60437 EXPRESSION TAG SEQADV 4Q28 HIS B 1651 UNP O60437 EXPRESSION TAG SEQADV 4Q28 SER B 1652 UNP O60437 EXPRESSION TAG SEQADV 4Q28 HIS B 1653 UNP O60437 EXPRESSION TAG SEQADV 4Q28 MSE B 1654 UNP O60437 EXPRESSION TAG SEQADV 4Q28 MSE C 1644 UNP O60437 EXPRESSION TAG SEQADV 4Q28 GLY C 1645 UNP O60437 EXPRESSION TAG SEQADV 4Q28 HIS C 1646 UNP O60437 EXPRESSION TAG SEQADV 4Q28 HIS C 1647 UNP O60437 EXPRESSION TAG SEQADV 4Q28 HIS C 1648 UNP O60437 EXPRESSION TAG SEQADV 4Q28 HIS C 1649 UNP O60437 EXPRESSION TAG SEQADV 4Q28 HIS C 1650 UNP O60437 EXPRESSION TAG SEQADV 4Q28 HIS C 1651 UNP O60437 EXPRESSION TAG SEQADV 4Q28 SER C 1652 UNP O60437 EXPRESSION TAG SEQADV 4Q28 HIS C 1653 UNP O60437 EXPRESSION TAG SEQADV 4Q28 MSE C 1654 UNP O60437 EXPRESSION TAG SEQADV 4Q28 MSE D 1644 UNP O60437 EXPRESSION TAG SEQADV 4Q28 GLY D 1645 UNP O60437 EXPRESSION TAG SEQADV 4Q28 HIS D 1646 UNP O60437 EXPRESSION TAG SEQADV 4Q28 HIS D 1647 UNP O60437 EXPRESSION TAG SEQADV 4Q28 HIS D 1648 UNP O60437 EXPRESSION TAG SEQADV 4Q28 HIS D 1649 UNP O60437 EXPRESSION TAG SEQADV 4Q28 HIS D 1650 UNP O60437 EXPRESSION TAG SEQADV 4Q28 HIS D 1651 UNP O60437 EXPRESSION TAG SEQADV 4Q28 SER D 1652 UNP O60437 EXPRESSION TAG SEQADV 4Q28 HIS D 1653 UNP O60437 EXPRESSION TAG SEQADV 4Q28 MSE D 1654 UNP O60437 EXPRESSION TAG SEQRES 1 A 113 MSE GLY HIS HIS HIS HIS HIS HIS SER HIS MSE ARG ARG SEQRES 2 A 113 SER ILE VAL VAL ILE HIS PRO ASP THR GLY ARG GLU LEU SEQRES 3 A 113 SER PRO GLU GLU ALA HIS ARG ALA GLY LEU ILE ASP TRP SEQRES 4 A 113 ASN MSE PHE VAL LYS LEU ARG SER GLN GLU CYS ASP TRP SEQRES 5 A 113 GLU GLU ILE SER VAL LYS GLY PRO ASN GLY GLU SER SER SEQRES 6 A 113 VAL ILE HIS ASP ARG LYS SER GLY LYS LYS PHE SER ILE SEQRES 7 A 113 GLU GLU ALA LEU GLN SER GLY ARG LEU THR PRO ALA GLN SEQRES 8 A 113 TYR ASP ARG TYR VAL ASN LYS ASP MSE SER ILE GLN GLU SEQRES 9 A 113 LEU ALA VAL LEU VAL SER GLY GLN LYS SEQRES 1 B 113 MSE GLY HIS HIS HIS HIS HIS HIS SER HIS MSE ARG ARG SEQRES 2 B 113 SER ILE VAL VAL ILE HIS PRO ASP THR GLY ARG GLU LEU SEQRES 3 B 113 SER PRO GLU GLU ALA HIS ARG ALA GLY LEU ILE ASP TRP SEQRES 4 B 113 ASN MSE PHE VAL LYS LEU ARG SER GLN GLU CYS ASP TRP SEQRES 5 B 113 GLU GLU ILE SER VAL LYS GLY PRO ASN GLY GLU SER SER SEQRES 6 B 113 VAL ILE HIS ASP ARG LYS SER GLY LYS LYS PHE SER ILE SEQRES 7 B 113 GLU GLU ALA LEU GLN SER GLY ARG LEU THR PRO ALA GLN SEQRES 8 B 113 TYR ASP ARG TYR VAL ASN LYS ASP MSE SER ILE GLN GLU SEQRES 9 B 113 LEU ALA VAL LEU VAL SER GLY GLN LYS SEQRES 1 C 113 MSE GLY HIS HIS HIS HIS HIS HIS SER HIS MSE ARG ARG SEQRES 2 C 113 SER ILE VAL VAL ILE HIS PRO ASP THR GLY ARG GLU LEU SEQRES 3 C 113 SER PRO GLU GLU ALA HIS ARG ALA GLY LEU ILE ASP TRP SEQRES 4 C 113 ASN MSE PHE VAL LYS LEU ARG SER GLN GLU CYS ASP TRP SEQRES 5 C 113 GLU GLU ILE SER VAL LYS GLY PRO ASN GLY GLU SER SER SEQRES 6 C 113 VAL ILE HIS ASP ARG LYS SER GLY LYS LYS PHE SER ILE SEQRES 7 C 113 GLU GLU ALA LEU GLN SER GLY ARG LEU THR PRO ALA GLN SEQRES 8 C 113 TYR ASP ARG TYR VAL ASN LYS ASP MSE SER ILE GLN GLU SEQRES 9 C 113 LEU ALA VAL LEU VAL SER GLY GLN LYS SEQRES 1 D 113 MSE GLY HIS HIS HIS HIS HIS HIS SER HIS MSE ARG ARG SEQRES 2 D 113 SER ILE VAL VAL ILE HIS PRO ASP THR GLY ARG GLU LEU SEQRES 3 D 113 SER PRO GLU GLU ALA HIS ARG ALA GLY LEU ILE ASP TRP SEQRES 4 D 113 ASN MSE PHE VAL LYS LEU ARG SER GLN GLU CYS ASP TRP SEQRES 5 D 113 GLU GLU ILE SER VAL LYS GLY PRO ASN GLY GLU SER SER SEQRES 6 D 113 VAL ILE HIS ASP ARG LYS SER GLY LYS LYS PHE SER ILE SEQRES 7 D 113 GLU GLU ALA LEU GLN SER GLY ARG LEU THR PRO ALA GLN SEQRES 8 D 113 TYR ASP ARG TYR VAL ASN LYS ASP MSE SER ILE GLN GLU SEQRES 9 D 113 LEU ALA VAL LEU VAL SER GLY GLN LYS MODRES 4Q28 MSE A 1654 MET SELENOMETHIONINE MODRES 4Q28 MSE A 1684 MET SELENOMETHIONINE MODRES 4Q28 MSE A 1743 MET SELENOMETHIONINE MODRES 4Q28 MSE B 1654 MET SELENOMETHIONINE MODRES 4Q28 MSE B 1684 MET SELENOMETHIONINE MODRES 4Q28 MSE B 1743 MET SELENOMETHIONINE MODRES 4Q28 MSE C 1654 MET SELENOMETHIONINE MODRES 4Q28 MSE C 1684 MET SELENOMETHIONINE MODRES 4Q28 MSE C 1743 MET SELENOMETHIONINE MODRES 4Q28 MSE D 1654 MET SELENOMETHIONINE MODRES 4Q28 MSE D 1684 MET SELENOMETHIONINE MODRES 4Q28 MSE D 1743 MET SELENOMETHIONINE HET MSE A1654 8 HET MSE A1684 8 HET MSE A1743 8 HET MSE B1654 8 HET MSE B1684 8 HET MSE B1743 8 HET MSE C1654 8 HET MSE C1684 8 HET MSE C1743 8 HET MSE D1654 8 HET MSE D1684 8 HET MSE D1743 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 12(C5 H11 N O2 SE) FORMUL 5 HOH *51(H2 O) HELIX 1 1 SER A 1670 ALA A 1677 1 8 HELIX 2 2 ASP A 1681 SER A 1690 1 10 HELIX 3 3 ILE A 1721 SER A 1727 1 7 HELIX 4 4 THR A 1731 ASN A 1740 1 10 HELIX 5 5 SER A 1744 GLY A 1754 1 11 HELIX 6 6 SER B 1670 GLY B 1678 1 9 HELIX 7 7 ASP B 1681 GLU B 1692 1 12 HELIX 8 8 ILE B 1721 SER B 1727 1 7 HELIX 9 9 THR B 1731 ASN B 1740 1 10 HELIX 10 10 SER B 1744 GLY B 1754 1 11 HELIX 11 11 SER C 1670 ALA C 1677 1 8 HELIX 12 12 ASP C 1681 GLN C 1691 1 11 HELIX 13 13 ILE C 1721 SER C 1727 1 7 HELIX 14 14 THR C 1731 ASN C 1740 1 10 HELIX 15 15 SER C 1744 SER C 1753 1 10 HELIX 16 16 SER D 1670 ALA D 1677 1 8 HELIX 17 17 ASP D 1681 GLU D 1692 1 12 HELIX 18 18 ILE D 1721 SER D 1727 1 7 HELIX 19 19 THR D 1731 ASN D 1740 1 10 HELIX 20 20 SER D 1744 SER D 1753 1 10 SHEET 1 A 4 GLU A1668 LEU A1669 0 SHEET 2 A 4 HIS A1648 ILE A1661 -1 N VAL A1660 O LEU A1669 SHEET 3 A 4 HIS D1648 ILE D1661 -1 O HIS D1653 N ARG A1655 SHEET 4 A 4 GLU D1668 LEU D1669 -1 O LEU D1669 N VAL D1660 SHEET 1 B 8 LYS A1717 SER A1720 0 SHEET 2 B 8 GLU A1706 ASP A1712 -1 N ASP A1712 O LYS A1717 SHEET 3 B 8 CYS A1693 LYS A1701 -1 N GLU A1696 O HIS A1711 SHEET 4 B 8 HIS A1648 ILE A1661 -1 N SER A1652 O GLU A1697 SHEET 5 B 8 HIS D1648 ILE D1661 -1 O HIS D1653 N ARG A1655 SHEET 6 B 8 CYS D1693 LYS D1701 -1 O LYS D1701 N HIS D1648 SHEET 7 B 8 GLU D1706 ASP D1712 -1 O HIS D1711 N GLU D1696 SHEET 8 B 8 LYS D1718 SER D1720 -1 O PHE D1719 N ILE D1710 SHEET 1 C 4 GLU B1668 LEU B1669 0 SHEET 2 C 4 HIS B1648 ILE B1661 -1 N VAL B1660 O LEU B1669 SHEET 3 C 4 HIS C1648 ILE C1661 -1 O HIS C1653 N ARG B1655 SHEET 4 C 4 GLU C1668 LEU C1669 -1 O LEU C1669 N VAL C1660 SHEET 1 D 8 LYS B1717 SER B1720 0 SHEET 2 D 8 GLY B1705 ASP B1712 -1 N ASP B1712 O LYS B1717 SHEET 3 D 8 CYS B1693 GLY B1702 -1 N GLU B1696 O HIS B1711 SHEET 4 D 8 HIS B1648 ILE B1661 -1 N HIS B1648 O LYS B1701 SHEET 5 D 8 HIS C1648 ILE C1661 -1 O HIS C1653 N ARG B1655 SHEET 6 D 8 CYS C1693 GLY C1702 -1 O GLU C1697 N SER C1652 SHEET 7 D 8 GLY C1705 ASP C1712 -1 O VAL C1709 N ILE C1698 SHEET 8 D 8 LYS C1718 SER C1720 -1 O PHE C1719 N ILE C1710 LINK C HIS A1653 N MSE A1654 1555 1555 1.33 LINK C MSE A1654 N ARG A1655 1555 1555 1.33 LINK C ASN A1683 N MSE A1684 1555 1555 1.33 LINK C MSE A1684 N PHE A1685 1555 1555 1.33 LINK C ASP A1742 N MSE A1743 1555 1555 1.33 LINK C MSE A1743 N SER A1744 1555 1555 1.32 LINK C HIS B1653 N MSE B1654 1555 1555 1.33 LINK C MSE B1654 N ARG B1655 1555 1555 1.33 LINK C ASN B1683 N MSE B1684 1555 1555 1.33 LINK C MSE B1684 N PHE B1685 1555 1555 1.33 LINK C ASP B1742 N MSE B1743 1555 1555 1.33 LINK C MSE B1743 N SER B1744 1555 1555 1.33 LINK C HIS C1653 N MSE C1654 1555 1555 1.33 LINK C MSE C1654 N ARG C1655 1555 1555 1.33 LINK C ASN C1683 N MSE C1684 1555 1555 1.33 LINK C MSE C1684 N PHE C1685 1555 1555 1.33 LINK C ASP C1742 N MSE C1743 1555 1555 1.33 LINK C MSE C1743 N SER C1744 1555 1555 1.33 LINK C HIS D1653 N MSE D1654 1555 1555 1.32 LINK C MSE D1654 N ARG D1655 1555 1555 1.33 LINK C ASN D1683 N MSE D1684 1555 1555 1.33 LINK C MSE D1684 N PHE D1685 1555 1555 1.33 LINK C ASP D1742 N MSE D1743 1555 1555 1.33 LINK C MSE D1743 N SER D1744 1555 1555 1.33 CRYST1 68.237 68.237 192.587 90.00 90.00 120.00 P 31 2 1 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014655 0.008461 0.000000 0.00000 SCALE2 0.000000 0.016922 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005192 0.00000