PDB Short entry for 4QKD HEADER OXIDOREDUCTASE 06-JUN-14 4QKD TITLE CRYSTAL STRUCTURE OF HUMAN ALKBH7 IN COMPLEX WITH ALPHA-KETOGLUTARATE TITLE 2 AND MN(II) COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 7, COMPND 3 MITOCHONDRIAL; COMPND 4 CHAIN: A, B, C; COMPND 5 FRAGMENT: UNP RESIDUES 17-215; COMPND 6 SYNONYM: ALKYLATED DNA REPAIR PROTEIN ALKB HOMOLOG 7, SPERMATOGENESIS COMPND 7 CELL PROLIFERATION-RELATED PROTEIN, SPERMATOGENESIS-ASSOCIATED COMPND 8 PROTEIN 11; COMPND 9 EC: 1.14.11.-; COMPND 10 ENGINEERED: YES; COMPND 11 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ABH7, ALKBH7, SPATA11, UNQ6002/PRO34564; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ALKBH7, DIOXYGENASE, METAL-BINDING, OXIDOREDUCTASE, PROGRAMMED KEYWDS 2 NECROSIS, FAT METABOLISM EXPDTA X-RAY DIFFRACTION AUTHOR G.WANG,Z.CHEN REVDAT 4 06-DEC-23 4QKD 1 REMARK REVDAT 3 08-NOV-23 4QKD 1 REMARK SEQADV LINK REVDAT 2 21-OCT-15 4QKD 1 JRNL REVDAT 1 20-AUG-14 4QKD 0 JRNL AUTH G.WANG,Q.HE,C.FENG,Y.LIU,Z.DENG,X.QI,W.WU,P.MEI,Z.CHEN JRNL TITL THE ATOMIC RESOLUTION STRUCTURE OF HUMAN ALKB HOMOLOG 7 JRNL TITL 2 (ALKBH7), A KEY PROTEIN FOR PROGRAMMED NECROSIS AND FAT JRNL TITL 3 METABOLISM JRNL REF J.BIOL.CHEM. V. 289 27924 2014 JRNL REFN ISSN 0021-9258 JRNL PMID 25122757 JRNL DOI 10.1074/JBC.M114.590505 REMARK 2 REMARK 2 RESOLUTION. 1.35 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0049 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.35 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.40 REMARK 3 DATA CUTOFF (SIGMA(F)) : 3.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 91.8 REMARK 3 NUMBER OF REFLECTIONS : 117785 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.146 REMARK 3 R VALUE (WORKING SET) : 0.146 REMARK 3 FREE R VALUE : 0.163 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 6254 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.35 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.39 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5898 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 62.02 REMARK 3 BIN R VALUE (WORKING SET) : 0.2130 REMARK 3 BIN FREE R VALUE SET COUNT : 342 REMARK 3 BIN FREE R VALUE : 0.2260 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4499 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 37 REMARK 3 SOLVENT ATOMS : 731 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.99 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -5.62000 REMARK 3 B22 (A**2) : 12.12000 REMARK 3 B33 (A**2) : -6.50000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 2.82000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.012 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.010 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.035 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.788 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.968 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.964 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4631 ; 0.008 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 4379 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6255 ; 1.348 ; 1.971 REMARK 3 BOND ANGLES OTHERS (DEGREES): 10031 ; 0.759 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 564 ; 6.504 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 212 ;29.040 ;20.755 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 766 ;12.090 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 66 ;18.469 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 675 ; 0.077 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5172 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1122 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2268 ; 1.630 ; 1.615 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2267 ; 1.623 ; 1.614 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2825 ; 1.828 ; 2.429 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2826 ; 1.828 ; 2.430 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2363 ; 1.769 ; 1.810 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2359 ; 1.771 ; 1.811 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 3426 ; 1.999 ; 2.651 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 5778 ; 3.252 ;14.991 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 5323 ; 2.483 ;13.899 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 9010 ; 2.395 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 208 ;21.627 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 9441 ; 6.371 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TWIN DETAILS REMARK 3 NUMBER OF TWIN DOMAINS : 3 REMARK 3 TWIN DOMAIN : 1 REMARK 3 TWIN OPERATOR : H, K, L REMARK 3 TWIN FRACTION : 0.699 REMARK 3 TWIN DOMAIN : 2 REMARK 3 TWIN OPERATOR : L, K, -H-L REMARK 3 TWIN FRACTION : 0.092 REMARK 3 TWIN DOMAIN : 3 REMARK 3 TWIN OPERATOR : -H-L, K, H REMARK 3 TWIN FRACTION : 0.210 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4QKD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 13-JUN-14. REMARK 100 THE DEPOSITION ID IS D_1000086164. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-OCT-12 REMARK 200 TEMPERATURE (KELVIN) : 130 REMARK 200 PH : 6 REMARK 200 NUMBER OF CRYSTALS USED : 3 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97930 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 124116 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.350 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.9 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.35 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.37 REMARK 200 COMPLETENESS FOR SHELL (%) : 61.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 4QKB REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.31 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG PH6, EVAPORATION, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 41.02400 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5170 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24530 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -44.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 100 REMARK 465 GLU A 207 REMARK 465 GLY A 208 REMARK 465 MET A 209 REMARK 465 GLY A 210 REMARK 465 PRO A 211 REMARK 465 GLY A 212 REMARK 465 GLU A 213 REMARK 465 SER A 214 REMARK 465 GLY A 215 REMARK 465 GLY B 100 REMARK 465 GLU B 207 REMARK 465 GLY B 208 REMARK 465 MET B 209 REMARK 465 GLY B 210 REMARK 465 PRO B 211 REMARK 465 GLY B 212 REMARK 465 GLU B 213 REMARK 465 SER B 214 REMARK 465 GLY B 215 REMARK 465 PRO C 99 REMARK 465 GLY C 100 REMARK 465 GLN C 101 REMARK 465 GLU C 207 REMARK 465 GLY C 208 REMARK 465 MET C 209 REMARK 465 GLY C 210 REMARK 465 PRO C 211 REMARK 465 GLY C 212 REMARK 465 GLU C 213 REMARK 465 SER C 214 REMARK 465 GLY C 215 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 16 CG SD CE REMARK 470 SER A 27 OG REMARK 470 GLN A 30 OE1 REMARK 470 ARG A 58 NH1 NH2 REMARK 470 ARG A 60 CD NE CZ NH1 NH2 REMARK 470 ARG A 80 CG CD NE CZ NH1 NH2 REMARK 470 THR A 102 OG1 CG2 REMARK 470 GLN A 149 CG CD OE1 NE2 REMARK 470 GLU A 150 CG CD OE1 OE2 REMARK 470 MET B 16 CG SD CE REMARK 470 GLN B 30 OE1 NE2 REMARK 470 GLU B 46 CD OE1 OE2 REMARK 470 ARG B 80 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 115 CD NE CZ NH1 NH2 REMARK 470 GLU B 160 CD OE1 OE2 REMARK 470 LEU B 205 CG CD1 CD2 REMARK 470 SER C 27 OG REMARK 470 ARG C 50 CD NE CZ NH1 NH2 REMARK 470 GLU C 55 OE2 REMARK 470 ARG C 80 CG CD NE CZ NH1 NH2 REMARK 470 GLU C 83 CD OE1 OE2 REMARK 470 THR C 102 OG1 CG2 REMARK 470 LEU C 103 CD1 CD2 REMARK 470 ARG C 115 NH1 REMARK 470 LEU C 155 CG CD1 CD2 REMARK 470 GLU C 183 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU C 45 O HOH C 515 2.07 REMARK 500 OE2 GLU B 45 O HOH B 511 2.08 REMARK 500 O HOH A 495 O HOH A 571 2.12 REMARK 500 OE2 GLU A 45 O HOH A 495 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 99 C - N - CD ANGL. DEV. = -14.5 DEGREES REMARK 500 ARG B 194 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 138 -47.42 81.59 REMARK 500 LEU B 138 -48.65 83.77 REMARK 500 LEU C 138 -49.22 79.78 REMARK 500 GLU C 150 92.89 -160.84 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 303 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 62 OE2 REMARK 620 2 GLU A 75 OE2 98.7 REMARK 620 3 HOH A 422 O 88.7 88.8 REMARK 620 4 HOH A 442 O 82.6 174.8 86.2 REMARK 620 5 HOH A 446 O 88.7 101.0 170.1 84.0 REMARK 620 6 HIS C 65 NE2 174.3 86.4 89.0 92.0 92.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 303 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 65 NE2 REMARK 620 2 GLU B 62 OE2 177.0 REMARK 620 3 GLU B 75 OE2 87.9 95.0 REMARK 620 4 HOH B 409 O 90.0 87.4 169.9 REMARK 620 5 HOH B 444 O 90.8 87.7 101.7 88.2 REMARK 620 6 HOH B 449 O 92.7 88.4 87.4 82.9 170.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 301 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 121 NE2 REMARK 620 2 ASP A 123 OD1 90.9 REMARK 620 3 HIS A 177 NE2 88.2 89.9 REMARK 620 4 AKG A 302 O2 95.1 97.3 172.0 REMARK 620 5 AKG A 302 O5 95.8 172.9 92.7 79.7 REMARK 620 6 HOH A 437 O 176.2 92.8 90.9 85.4 80.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN C 303 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 65 NE2 REMARK 620 2 GLU C 62 OE2 176.0 REMARK 620 3 GLU C 75 OE2 87.4 96.2 REMARK 620 4 HOH C 476 O 88.9 87.4 173.9 REMARK 620 5 HOH C 477 O 90.3 91.0 99.0 85.8 REMARK 620 6 HOH C 479 O 89.3 89.0 88.1 87.0 172.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 301 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 121 NE2 REMARK 620 2 ASP B 123 OD1 93.1 REMARK 620 3 HIS B 177 NE2 90.6 91.2 REMARK 620 4 AKG B 302 O2 94.9 98.6 168.4 REMARK 620 5 AKG B 302 O5 92.8 172.2 93.8 75.8 REMARK 620 6 HOH B 427 O 177.3 89.5 89.9 84.1 84.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 304 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 189 OE1 REMARK 620 2 HOH B 502 O 86.5 REMARK 620 3 HOH B 528 O 89.0 80.8 REMARK 620 4 HOH B 554 O 170.2 85.4 84.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN C 301 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS C 121 NE2 REMARK 620 2 ASP C 123 OD1 92.8 REMARK 620 3 HIS C 177 NE2 92.1 95.0 REMARK 620 4 AKG C 302 O2 92.2 94.7 169.2 REMARK 620 5 AKG C 302 O5 96.3 168.7 91.4 78.3 REMARK 620 6 HOH C 421 O 178.1 89.0 88.5 87.0 81.9 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AKG A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AKG B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN C 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AKG C 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN C 303 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4QKF RELATED DB: PDB REMARK 900 RELATED ID: 4QKB RELATED DB: PDB DBREF 4QKD A 17 215 UNP Q9BT30 ALKB7_HUMAN 17 215 DBREF 4QKD B 17 215 UNP Q9BT30 ALKB7_HUMAN 17 215 DBREF 4QKD C 17 215 UNP Q9BT30 ALKB7_HUMAN 17 215 SEQADV 4QKD MET A 16 UNP Q9BT30 EXPRESSION TAG SEQADV 4QKD ARG A 90 UNP Q9BT30 GLN 90 ENGINEERED MUTATION SEQADV 4QKD MET B 16 UNP Q9BT30 EXPRESSION TAG SEQADV 4QKD ARG B 90 UNP Q9BT30 GLN 90 ENGINEERED MUTATION SEQADV 4QKD MET C 16 UNP Q9BT30 EXPRESSION TAG SEQADV 4QKD ARG C 90 UNP Q9BT30 GLN 90 ENGINEERED MUTATION SEQRES 1 A 200 MET TRP VAL ARG GLY SER GLY PRO SER VAL LEU SER ARG SEQRES 2 A 200 LEU GLN ASP ALA ALA VAL VAL ARG PRO GLY PHE LEU SER SEQRES 3 A 200 THR ALA GLU GLU GLU THR LEU SER ARG GLU LEU GLU PRO SEQRES 4 A 200 GLU LEU ARG ARG ARG ARG TYR GLU TYR ASP HIS TRP ASP SEQRES 5 A 200 ALA ALA ILE HIS GLY PHE ARG GLU THR GLU LYS SER ARG SEQRES 6 A 200 TRP SER GLU ALA SER ARG ALA ILE LEU ARG ARG VAL GLN SEQRES 7 A 200 ALA ALA ALA PHE GLY PRO GLY GLN THR LEU LEU SER SER SEQRES 8 A 200 VAL HIS VAL LED ASP LEU GLU ALA ARG GLY TYR ILE LYS SEQRES 9 A 200 PRO HIS VAL ASP SER ILE LYS PHE CYS GLY ALA THR ILE SEQRES 10 A 200 ALA GLY LEU SER LEU LEU SER PRO SER VAL MET ARG LEU SEQRES 11 A 200 VAL HIS THR GLN GLU PRO GLY GLU TRP LEU GLU LEU LEU SEQRES 12 A 200 LEU GLU PRO GLY SER LEU TYR ILE LEU ARG GLY SER ALA SEQRES 13 A 200 ARG TYR ASP PHE SER HIS GLU ILE LEU ARG ASP GLU GLU SEQRES 14 A 200 SER PHE PHE GLY GLU ARG ARG ILE PRO ARG GLY ARG ARG SEQRES 15 A 200 ILE SER VAL ILE CYS ARG SER LEU PRO GLU GLY MET GLY SEQRES 16 A 200 PRO GLY GLU SER GLY SEQRES 1 B 200 MET TRP VAL ARG GLY SER GLY PRO SER VAL LEU SER ARG SEQRES 2 B 200 LEU GLN ASP ALA ALA VAL VAL ARG PRO GLY PHE LEU SER SEQRES 3 B 200 THR ALA GLU GLU GLU THR LEU SER ARG GLU LEU GLU PRO SEQRES 4 B 200 GLU LEU ARG ARG ARG ARG TYR GLU TYR ASP HIS TRP ASP SEQRES 5 B 200 ALA ALA ILE HIS GLY PHE ARG GLU THR GLU LYS SER ARG SEQRES 6 B 200 TRP SER GLU ALA SER ARG ALA ILE LEU ARG ARG VAL GLN SEQRES 7 B 200 ALA ALA ALA PHE GLY PRO GLY GLN THR LEU LEU SER SER SEQRES 8 B 200 VAL HIS VAL LED ASP LEU GLU ALA ARG GLY TYR ILE LYS SEQRES 9 B 200 PRO HIS VAL ASP SER ILE LYS PHE CYS GLY ALA THR ILE SEQRES 10 B 200 ALA GLY LEU SER LEU LEU SER PRO SER VAL MET ARG LEU SEQRES 11 B 200 VAL HIS THR GLN GLU PRO GLY GLU TRP LEU GLU LEU LEU SEQRES 12 B 200 LEU GLU PRO GLY SER LEU TYR ILE LEU ARG GLY SER ALA SEQRES 13 B 200 ARG TYR ASP PHE SER HIS GLU ILE LEU ARG ASP GLU GLU SEQRES 14 B 200 SER PHE PHE GLY GLU ARG ARG ILE PRO ARG GLY ARG ARG SEQRES 15 B 200 ILE SER VAL ILE CYS ARG SER LEU PRO GLU GLY MET GLY SEQRES 16 B 200 PRO GLY GLU SER GLY SEQRES 1 C 200 MET TRP VAL ARG GLY SER GLY PRO SER VAL LEU SER ARG SEQRES 2 C 200 LEU GLN ASP ALA ALA VAL VAL ARG PRO GLY PHE LEU SER SEQRES 3 C 200 THR ALA GLU GLU GLU THR LEU SER ARG GLU LEU GLU PRO SEQRES 4 C 200 GLU LEU ARG ARG ARG ARG TYR GLU TYR ASP HIS TRP ASP SEQRES 5 C 200 ALA ALA ILE HIS GLY PHE ARG GLU THR GLU LYS SER ARG SEQRES 6 C 200 TRP SER GLU ALA SER ARG ALA ILE LEU ARG ARG VAL GLN SEQRES 7 C 200 ALA ALA ALA PHE GLY PRO GLY GLN THR LEU LEU SER SER SEQRES 8 C 200 VAL HIS VAL LED ASP LEU GLU ALA ARG GLY TYR ILE LYS SEQRES 9 C 200 PRO HIS VAL ASP SER ILE LYS PHE CYS GLY ALA THR ILE SEQRES 10 C 200 ALA GLY LEU SER LEU LEU SER PRO SER VAL MET ARG LEU SEQRES 11 C 200 VAL HIS THR GLN GLU PRO GLY GLU TRP LEU GLU LEU LEU SEQRES 12 C 200 LEU GLU PRO GLY SER LEU TYR ILE LEU ARG GLY SER ALA SEQRES 13 C 200 ARG TYR ASP PHE SER HIS GLU ILE LEU ARG ASP GLU GLU SEQRES 14 C 200 SER PHE PHE GLY GLU ARG ARG ILE PRO ARG GLY ARG ARG SEQRES 15 C 200 ILE SER VAL ILE CYS ARG SER LEU PRO GLU GLY MET GLY SEQRES 16 C 200 PRO GLY GLU SER GLY MODRES 4QKD LED A 110 LEU (4R)-5-OXO-L-LEUCINE MODRES 4QKD LED B 110 LEU (4R)-5-OXO-L-LEUCINE MODRES 4QKD LED C 110 LEU (4R)-5-OXO-L-LEUCINE HET LED A 110 9 HET LED B 110 9 HET LED C 110 9 HET MN A 301 1 HET AKG A 302 10 HET MN A 303 1 HET MN B 301 1 HET AKG B 302 10 HET MN B 303 1 HET MN B 304 1 HET MN C 301 1 HET AKG C 302 10 HET MN C 303 1 HETNAM LED (4R)-5-OXO-L-LEUCINE HETNAM MN MANGANESE (II) ION HETNAM AKG 2-OXOGLUTARIC ACID FORMUL 1 LED 3(C6 H11 N O3) FORMUL 4 MN 7(MN 2+) FORMUL 5 AKG 3(C5 H6 O5) FORMUL 14 HOH *731(H2 O) HELIX 1 1 GLY A 22 LEU A 29 1 8 HELIX 2 2 SER A 41 ARG A 58 1 18 HELIX 3 3 SER A 82 PHE A 97 1 16 HELIX 4 4 GLY A 169 ASP A 174 1 6 HELIX 5 5 ARG A 181 GLU A 184 5 4 HELIX 6 6 GLY B 22 LEU B 29 1 8 HELIX 7 7 SER B 41 ARG B 58 1 18 HELIX 8 8 SER B 82 PHE B 97 1 16 HELIX 9 9 GLY B 169 ASP B 174 1 6 HELIX 10 10 ARG B 181 GLU B 184 5 4 HELIX 11 11 GLY C 22 LEU C 29 1 8 HELIX 12 12 SER C 41 ARG C 58 1 18 HELIX 13 13 SER C 82 PHE C 97 1 16 HELIX 14 14 GLY C 169 ASP C 174 1 6 HELIX 15 15 ARG C 181 GLU C 184 5 4 SHEET 1 A 9 VAL A 18 GLY A 20 0 SHEET 2 A 9 TRP A 154 LEU A 159 -1 O GLU A 156 N ARG A 19 SHEET 3 A 9 SER A 141 HIS A 147 -1 N MET A 143 O LEU A 157 SHEET 4 A 9 PHE A 175 ILE A 179 -1 O SER A 176 N VAL A 146 SHEET 5 A 9 VAL A 107 HIS A 121 -1 N HIS A 121 O HIS A 177 SHEET 6 A 9 ARG A 197 ARG A 203 -1 O ILE A 201 N HIS A 108 SHEET 7 A 9 THR A 131 LEU A 137 -1 N ALA A 133 O CYS A 202 SHEET 8 A 9 LEU A 164 ARG A 168 -1 O LEU A 167 N ILE A 132 SHEET 9 A 9 ALA A 33 ARG A 36 -1 N ARG A 36 O LEU A 164 SHEET 1 B 6 VAL A 18 GLY A 20 0 SHEET 2 B 6 TRP A 154 LEU A 159 -1 O GLU A 156 N ARG A 19 SHEET 3 B 6 SER A 141 HIS A 147 -1 N MET A 143 O LEU A 157 SHEET 4 B 6 PHE A 175 ILE A 179 -1 O SER A 176 N VAL A 146 SHEET 5 B 6 VAL A 107 HIS A 121 -1 N HIS A 121 O HIS A 177 SHEET 6 B 6 ILE A 70 LYS A 78 -1 N THR A 76 O VAL A 109 SHEET 1 C 2 PHE A 186 PHE A 187 0 SHEET 2 C 2 ARG A 190 ARG A 191 -1 O ARG A 190 N PHE A 187 SHEET 1 D 9 VAL B 18 GLY B 20 0 SHEET 2 D 9 TRP B 154 LEU B 159 -1 O GLU B 156 N ARG B 19 SHEET 3 D 9 SER B 141 HIS B 147 -1 N MET B 143 O LEU B 157 SHEET 4 D 9 PHE B 175 ILE B 179 -1 O SER B 176 N VAL B 146 SHEET 5 D 9 VAL B 107 HIS B 121 -1 N HIS B 121 O HIS B 177 SHEET 6 D 9 ARG B 197 ARG B 203 -1 O ILE B 201 N HIS B 108 SHEET 7 D 9 THR B 131 LEU B 137 -1 N ALA B 133 O CYS B 202 SHEET 8 D 9 LEU B 164 ARG B 168 -1 O LEU B 167 N ILE B 132 SHEET 9 D 9 ALA B 33 ARG B 36 -1 N ARG B 36 O LEU B 164 SHEET 1 E 6 VAL B 18 GLY B 20 0 SHEET 2 E 6 TRP B 154 LEU B 159 -1 O GLU B 156 N ARG B 19 SHEET 3 E 6 SER B 141 HIS B 147 -1 N MET B 143 O LEU B 157 SHEET 4 E 6 PHE B 175 ILE B 179 -1 O SER B 176 N VAL B 146 SHEET 5 E 6 VAL B 107 HIS B 121 -1 N HIS B 121 O HIS B 177 SHEET 6 E 6 ILE B 70 LYS B 78 -1 N ARG B 74 O ASP B 111 SHEET 1 F 2 PHE B 186 PHE B 187 0 SHEET 2 F 2 ARG B 190 ARG B 191 -1 O ARG B 190 N PHE B 187 SHEET 1 G 9 VAL C 18 GLY C 20 0 SHEET 2 G 9 TRP C 154 LEU C 159 -1 O GLU C 156 N ARG C 19 SHEET 3 G 9 SER C 141 HIS C 147 -1 N SER C 141 O LEU C 159 SHEET 4 G 9 PHE C 175 ILE C 179 -1 O SER C 176 N VAL C 146 SHEET 5 G 9 VAL C 107 HIS C 121 -1 N HIS C 121 O HIS C 177 SHEET 6 G 9 ARG C 197 ARG C 203 -1 O ILE C 201 N HIS C 108 SHEET 7 G 9 THR C 131 LEU C 137 -1 N ALA C 133 O CYS C 202 SHEET 8 G 9 LEU C 164 ARG C 168 -1 O TYR C 165 N GLY C 134 SHEET 9 G 9 ALA C 33 ARG C 36 -1 N ARG C 36 O LEU C 164 SHEET 1 H 6 VAL C 18 GLY C 20 0 SHEET 2 H 6 TRP C 154 LEU C 159 -1 O GLU C 156 N ARG C 19 SHEET 3 H 6 SER C 141 HIS C 147 -1 N SER C 141 O LEU C 159 SHEET 4 H 6 PHE C 175 ILE C 179 -1 O SER C 176 N VAL C 146 SHEET 5 H 6 VAL C 107 HIS C 121 -1 N HIS C 121 O HIS C 177 SHEET 6 H 6 ILE C 70 LYS C 78 -1 N ARG C 74 O ASP C 111 SHEET 1 I 2 PHE C 186 PHE C 187 0 SHEET 2 I 2 ARG C 190 ARG C 191 -1 O ARG C 190 N PHE C 187 LINK C VAL A 109 N LED A 110 1555 1555 1.33 LINK C LED A 110 N ASP A 111 1555 1555 1.33 LINK C VAL B 109 N LED B 110 1555 1555 1.33 LINK C LED B 110 N ASP B 111 1555 1555 1.34 LINK C VAL C 109 N LED C 110 1555 1555 1.34 LINK C LED C 110 N ASP C 111 1555 1555 1.33 LINK OE2 GLU A 62 MN MN A 303 1555 1555 2.18 LINK NE2 HIS A 65 MN MN B 303 1555 1555 2.28 LINK OE2 GLU A 75 MN MN A 303 1555 1555 2.23 LINK NE2 HIS A 121 MN MN A 301 1555 1555 2.08 LINK OD1 ASP A 123 MN MN A 301 1555 1555 2.15 LINK NE2 HIS A 177 MN MN A 301 1555 1555 2.15 LINK MN MN A 301 O2 AKG A 302 1555 1555 2.08 LINK MN MN A 301 O5 AKG A 302 1555 1555 2.14 LINK MN MN A 301 O HOH A 437 1555 1555 2.19 LINK MN MN A 303 O HOH A 422 1555 1555 2.26 LINK MN MN A 303 O HOH A 442 1555 1555 2.29 LINK MN MN A 303 O HOH A 446 1555 1555 2.18 LINK MN MN A 303 NE2 HIS C 65 1555 1555 2.27 LINK OE2 GLU B 62 MN MN B 303 1555 1555 2.20 LINK NE2 HIS B 65 MN MN C 303 1555 1555 2.26 LINK OE2 GLU B 75 MN MN B 303 1555 1555 2.22 LINK NE2 HIS B 121 MN MN B 301 1555 1555 2.10 LINK OD1 ASP B 123 MN MN B 301 1555 1555 2.11 LINK NE2 HIS B 177 MN MN B 301 1555 1555 2.09 LINK OE1 GLU B 189 MN MN B 304 1555 1555 2.06 LINK MN MN B 301 O2 AKG B 302 1555 1555 2.07 LINK MN MN B 301 O5 AKG B 302 1555 1555 2.19 LINK MN MN B 301 O HOH B 427 1555 1555 2.20 LINK MN MN B 303 O HOH B 409 1555 1555 2.17 LINK MN MN B 303 O HOH B 444 1555 1555 2.20 LINK MN MN B 303 O HOH B 449 1555 1555 2.22 LINK MN MN B 304 O HOH B 502 1555 1555 2.40 LINK MN MN B 304 O HOH B 528 1555 1555 2.32 LINK MN MN B 304 O HOH B 554 1555 1555 2.12 LINK OE2 GLU C 62 MN MN C 303 1555 1555 2.14 LINK OE2 GLU C 75 MN MN C 303 1555 1555 2.21 LINK NE2 HIS C 121 MN MN C 301 1555 1555 2.09 LINK OD1 ASP C 123 MN MN C 301 1555 1555 2.10 LINK NE2 HIS C 177 MN MN C 301 1555 1555 2.11 LINK MN MN C 301 O2 AKG C 302 1555 1555 2.03 LINK MN MN C 301 O5 AKG C 302 1555 1555 2.11 LINK MN MN C 301 O HOH C 421 1555 1555 2.10 LINK MN MN C 303 O HOH C 476 1555 1555 2.24 LINK MN MN C 303 O HOH C 477 1555 1555 2.22 LINK MN MN C 303 O HOH C 479 1555 1555 2.30 SITE 1 AC1 5 HIS A 121 ASP A 123 HIS A 177 AKG A 302 SITE 2 AC1 5 HOH A 437 SITE 1 AC2 14 HIS A 108 LED A 110 ILE A 118 HIS A 121 SITE 2 AC2 14 ASP A 123 TYR A 165 HIS A 177 ARG A 197 SITE 3 AC2 14 SER A 199 ARG A 203 MN A 301 HOH A 404 SITE 4 AC2 14 HOH A 434 HOH A 437 SITE 1 AC3 6 GLU A 62 GLU A 75 HOH A 422 HOH A 442 SITE 2 AC3 6 HOH A 446 HIS C 65 SITE 1 AC4 5 HIS B 121 ASP B 123 HIS B 177 AKG B 302 SITE 2 AC4 5 HOH B 427 SITE 1 AC5 15 HIS B 108 LED B 110 ILE B 118 HIS B 121 SITE 2 AC5 15 ASP B 123 TYR B 165 HIS B 177 ARG B 197 SITE 3 AC5 15 SER B 199 ILE B 201 ARG B 203 MN B 301 SITE 4 AC5 15 HOH B 419 HOH B 427 HOH B 446 SITE 1 AC6 6 HIS A 65 GLU B 62 GLU B 75 HOH B 409 SITE 2 AC6 6 HOH B 444 HOH B 449 SITE 1 AC7 6 GLU A 189 GLU B 189 HOH B 502 HOH B 528 SITE 2 AC7 6 HOH B 554 GLU C 189 SITE 1 AC8 5 HIS C 121 ASP C 123 HIS C 177 AKG C 302 SITE 2 AC8 5 HOH C 421 SITE 1 AC9 15 HOH B 662 HIS C 108 LED C 110 ILE C 118 SITE 2 AC9 15 HIS C 121 ASP C 123 TYR C 165 HIS C 177 SITE 3 AC9 15 ARG C 197 SER C 199 ILE C 201 ARG C 203 SITE 4 AC9 15 MN C 301 HOH C 401 HOH C 421 SITE 1 BC1 6 HIS B 65 GLU C 62 GLU C 75 HOH C 476 SITE 2 BC1 6 HOH C 477 HOH C 479 CRYST1 66.426 82.048 66.414 90.00 120.03 90.00 P 1 21 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015054 0.000000 0.008701 0.00000 SCALE2 0.000000 0.012188 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017391 0.00000