PDB Short entry for 4QQN HEADER TRANSFERASE 27-JUN-14 4QQN TITLE PROTEIN ARGININE METHYLTRANSFERASE 3 IN COMPLEX WITH COMPOUND TITLE 2 MTV044246 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PRMT3 PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PRMT3; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)-CODON PLUS RIL(STRATAGEN); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28A-LIC KEYWDS PRMT3, STRUCTURAL GENOMICS, STRUCTURAL GENOMICS CONSORTIUM, SGC, KEYWDS 2 TRANSFERASE, EPIGENETICS EXPDTA X-RAY DIFFRACTION AUTHOR A.DONG,E.DOBROVETSKY,W.TEMPEL,H.HE,K.ZHAO,D.SMIL,M.LANDON,X.LUO, AUTHOR 2 Z.CHEN,M.DAI,Z.YU,Y.LIN,H.ZHANG,K.ZHAO,M.SCHAPIRA,P.J.BROWN, AUTHOR 3 C.BOUNTRA,C.H.ARROWSMITH,A.M.EDWARDS,M.VEDADI,STRUCTURAL GENOMICS AUTHOR 4 CONSORTIUM (SGC) REVDAT 4 20-SEP-23 4QQN 1 REMARK SEQADV REVDAT 3 16-MAY-18 4QQN 1 JRNL REVDAT 2 15-OCT-14 4QQN 1 AUTHOR REVDAT 1 17-SEP-14 4QQN 0 JRNL AUTH H.U.KANISKAN,M.S.ERAM,K.ZHAO,M.M.SZEWCZYK,X.YANG,K.SCHMIDT, JRNL AUTH 2 X.LUO,S.XIAO,M.DAI,F.HE,I.ZANG,Y.LIN,F.LI,E.DOBROVETSKY, JRNL AUTH 3 D.SMIL,S.J.MIN,J.LIN-JONES,M.SCHAPIRA,P.ATADJA,E.LI, JRNL AUTH 4 D.BARSYTE-LOVEJOY,C.H.ARROWSMITH,P.J.BROWN,F.LIU,Z.YU, JRNL AUTH 5 M.VEDADI,J.JIN JRNL TITL DISCOVERY OF POTENT AND SELECTIVE ALLOSTERIC INHIBITORS OF JRNL TITL 2 PROTEIN ARGININE METHYLTRANSFERASE 3 (PRMT3). JRNL REF J. MED. CHEM. V. 61 1204 2018 JRNL REFN ISSN 1520-4804 JRNL PMID 29244490 JRNL DOI 10.1021/ACS.JMEDCHEM.7B01674 REMARK 2 REMARK 2 RESOLUTION. 2.08 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0073 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.08 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 26987 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.183 REMARK 3 FREE R VALUE : 0.212 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.200 REMARK 3 FREE R VALUE TEST SET COUNT : 858 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.08 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.13 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1878 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.79 REMARK 3 BIN R VALUE (WORKING SET) : 0.2460 REMARK 3 BIN FREE R VALUE SET COUNT : 64 REMARK 3 BIN FREE R VALUE : 0.2490 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2328 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 43 REMARK 3 SOLVENT ATOMS : 156 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 30.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.67 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.06000 REMARK 3 B22 (A**2) : 0.06000 REMARK 3 B33 (A**2) : -0.12000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.155 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.139 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.097 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.614 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.959 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.949 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2461 ; 0.008 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2369 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3343 ; 1.231 ; 1.954 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5470 ; 0.720 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 311 ; 5.818 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 96 ;33.377 ;24.583 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 430 ;11.751 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 7 ;19.776 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 390 ; 0.075 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2778 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 535 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1213 ; 1.674 ; 3.223 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1214 ; 1.674 ; 3.224 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1515 ; 2.524 ; 4.814 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 4QQN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-JUL-14. REMARK 100 THE DEPOSITION ID IS D_1000086390. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-APR-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97904 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27071 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.080 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 6.000 REMARK 200 R MERGE (I) : 0.07700 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 25.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.08 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.12 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.40 REMARK 200 R MERGE FOR SHELL (I) : 0.70400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP 11.1.03 REMARK 200 STARTING MODEL: PDB ENTRY 4HSG REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.94 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.79 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG 4000, 0.2 M MGCL2, 0.1 M TRIS REMARK 280 HCL PH8.5, VAPOR DIFFUSION HANGING DROP, TEMPERATURE 293K, VAPOR REMARK 280 DIFFUSION, HANGING DROP REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 86.45900 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 35.15950 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 35.15950 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 129.68850 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 35.15950 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 35.15950 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 43.22950 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 35.15950 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 35.15950 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 129.68850 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 35.15950 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 35.15950 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 43.22950 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 86.45900 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4070 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25030 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -57.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 86.45900 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 209 REMARK 465 GLY A 210 REMARK 465 SER A 211 REMARK 465 SER A 212 REMARK 465 HIS A 213 REMARK 465 HIS A 214 REMARK 465 HIS A 215 REMARK 465 HIS A 216 REMARK 465 HIS A 217 REMARK 465 HIS A 218 REMARK 465 SER A 219 REMARK 465 SER A 220 REMARK 465 GLY A 221 REMARK 465 LEU A 222 REMARK 465 VAL A 223 REMARK 465 PRO A 224 REMARK 465 ARG A 225 REMARK 465 GLY A 226 REMARK 465 SER A 227 REMARK 465 ASP A 228 REMARK 465 LEU A 229 REMARK 465 GLN A 230 REMARK 465 GLU A 231 REMARK 465 ASP A 232 REMARK 465 GLU A 233 REMARK 465 ASP A 234 REMARK 465 GLY A 235 REMARK 465 VAL A 236 REMARK 465 TYR A 237 REMARK 465 PHE A 238 REMARK 465 SER A 239 REMARK 465 SER A 240 REMARK 465 TYR A 241 REMARK 465 GLY A 242 REMARK 465 HIS A 243 REMARK 465 LYS A 526 REMARK 465 LYS A 527 REMARK 465 ASP A 528 REMARK 465 PRO A 529 REMARK 465 ARG A 530 REMARK 465 GLN A 548 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 272 NZ REMARK 470 LYS A 292 CE NZ REMARK 470 GLU A 305 CG CD OE1 OE2 REMARK 470 LYS A 367 CE NZ REMARK 470 LYS A 371 CG CD CE NZ REMARK 470 LYS A 427 CE NZ REMARK 470 ILE A 446 CD1 REMARK 470 LYS A 458 CG CD CE NZ REMARK 470 LYS A 506 CD CE NZ REMARK 470 LYS A 517 NZ REMARK 470 LYS A 524 CG CD CE NZ REMARK 470 ASN A 525 CG OD1 ND2 REMARK 470 SER A 531 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CG2 THR A 444 UNK UNX A 610 2.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 352 -50.89 69.51 REMARK 500 ASP A 389 80.99 -150.53 REMARK 500 GLU A 477 -53.74 -128.43 REMARK 500 GLU A 477 -52.82 -128.78 REMARK 500 ASN A 479 16.61 57.07 REMARK 500 LYS A 498 -140.50 47.82 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 3BQ A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 603 DBREF 4QQN A 228 548 UNP Q8WUV3 Q8WUV3_HUMAN 228 548 SEQADV 4QQN MET A 209 UNP Q8WUV3 EXPRESSION TAG SEQADV 4QQN GLY A 210 UNP Q8WUV3 EXPRESSION TAG SEQADV 4QQN SER A 211 UNP Q8WUV3 EXPRESSION TAG SEQADV 4QQN SER A 212 UNP Q8WUV3 EXPRESSION TAG SEQADV 4QQN HIS A 213 UNP Q8WUV3 EXPRESSION TAG SEQADV 4QQN HIS A 214 UNP Q8WUV3 EXPRESSION TAG SEQADV 4QQN HIS A 215 UNP Q8WUV3 EXPRESSION TAG SEQADV 4QQN HIS A 216 UNP Q8WUV3 EXPRESSION TAG SEQADV 4QQN HIS A 217 UNP Q8WUV3 EXPRESSION TAG SEQADV 4QQN HIS A 218 UNP Q8WUV3 EXPRESSION TAG SEQADV 4QQN SER A 219 UNP Q8WUV3 EXPRESSION TAG SEQADV 4QQN SER A 220 UNP Q8WUV3 EXPRESSION TAG SEQADV 4QQN GLY A 221 UNP Q8WUV3 EXPRESSION TAG SEQADV 4QQN LEU A 222 UNP Q8WUV3 EXPRESSION TAG SEQADV 4QQN VAL A 223 UNP Q8WUV3 EXPRESSION TAG SEQADV 4QQN PRO A 224 UNP Q8WUV3 EXPRESSION TAG SEQADV 4QQN ARG A 225 UNP Q8WUV3 EXPRESSION TAG SEQADV 4QQN GLY A 226 UNP Q8WUV3 EXPRESSION TAG SEQADV 4QQN SER A 227 UNP Q8WUV3 EXPRESSION TAG SEQRES 1 A 340 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 340 LEU VAL PRO ARG GLY SER ASP LEU GLN GLU ASP GLU ASP SEQRES 3 A 340 GLY VAL TYR PHE SER SER TYR GLY HIS TYR GLY ILE HIS SEQRES 4 A 340 GLU GLU MET LEU LYS ASP LYS ILE ARG THR GLU SER TYR SEQRES 5 A 340 ARG ASP PHE ILE TYR GLN ASN PRO HIS ILE PHE LYS ASP SEQRES 6 A 340 LYS VAL VAL LEU ASP VAL GLY CYS GLY THR GLY ILE LEU SEQRES 7 A 340 SER MET PHE ALA ALA LYS ALA GLY ALA LYS LYS VAL LEU SEQRES 8 A 340 GLY VAL ASP GLN SER GLU ILE LEU TYR GLN ALA MET ASP SEQRES 9 A 340 ILE ILE ARG LEU ASN LYS LEU GLU ASP THR ILE THR LEU SEQRES 10 A 340 ILE LYS GLY LYS ILE GLU GLU VAL HIS LEU PRO VAL GLU SEQRES 11 A 340 LYS VAL ASP VAL ILE ILE SER GLU TRP MET GLY TYR PHE SEQRES 12 A 340 LEU LEU PHE GLU SER MET LEU ASP SER VAL LEU TYR ALA SEQRES 13 A 340 LYS ASN LYS TYR LEU ALA LYS GLY GLY SER VAL TYR PRO SEQRES 14 A 340 ASP ILE CYS THR ILE SER LEU VAL ALA VAL SER ASP VAL SEQRES 15 A 340 ASN LYS HIS ALA ASP ARG ILE ALA PHE TRP ASP ASP VAL SEQRES 16 A 340 TYR GLY PHE LYS MET SER CYS MET LYS LYS ALA VAL ILE SEQRES 17 A 340 PRO GLU ALA VAL VAL GLU VAL LEU ASP PRO LYS THR LEU SEQRES 18 A 340 ILE SER GLU PRO CYS GLY ILE LYS HIS ILE ASP CYS HIS SEQRES 19 A 340 THR THR SER ILE SER ASP LEU GLU PHE SER SER ASP PHE SEQRES 20 A 340 THR LEU LYS ILE THR ARG THR SER MET CYS THR ALA ILE SEQRES 21 A 340 ALA GLY TYR PHE ASP ILE TYR PHE GLU LYS ASN CYS HIS SEQRES 22 A 340 ASN ARG VAL VAL PHE SER THR GLY PRO GLN SER THR LYS SEQRES 23 A 340 THR HIS TRP LYS GLN THR VAL PHE LEU LEU GLU LYS PRO SEQRES 24 A 340 PHE SER VAL LYS ALA GLY GLU ALA LEU LYS GLY LYS VAL SEQRES 25 A 340 THR VAL HIS LYS ASN LYS LYS ASP PRO ARG SER LEU THR SEQRES 26 A 340 VAL THR LEU THR LEU ASN ASN SER THR GLN THR TYR GLY SEQRES 27 A 340 LEU GLN HET 3BQ A 601 33 HET GOL A 602 6 HET CL A 603 1 HET UNX A 604 1 HET UNX A 605 1 HET UNX A 606 1 HET UNX A 607 1 HET UNX A 608 1 HET UNX A 609 1 HET UNX A 610 1 HET UNX A 611 1 HET UNX A 612 1 HET UNX A 613 1 HET UNX A 614 1 HET UNX A 615 1 HETNAM 3BQ 1-{2-[1-(AMINOMETHYL)CYCLOHEXYL]ETHYL}-3-ISOQUINOLIN-6- HETNAM 2 3BQ YLUREA HETNAM GOL GLYCEROL HETNAM CL CHLORIDE ION HETNAM UNX UNKNOWN ATOM OR ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 3BQ C19 H26 N4 O FORMUL 3 GOL C3 H8 O3 FORMUL 4 CL CL 1- FORMUL 5 UNX 12(X) FORMUL 17 HOH *156(H2 O) HELIX 1 1 TYR A 244 ASP A 253 1 10 HELIX 2 2 ASP A 253 ASN A 267 1 15 HELIX 3 3 PRO A 268 PHE A 271 5 4 HELIX 4 4 GLY A 284 ALA A 293 1 10 HELIX 5 5 GLU A 305 ASN A 317 1 13 HELIX 6 6 MET A 357 TYR A 368 1 12 HELIX 7 7 ASP A 389 ILE A 397 1 9 HELIX 8 8 ALA A 398 ASP A 402 5 5 HELIX 9 9 MET A 408 CYS A 410 5 3 HELIX 10 10 MET A 411 ILE A 416 1 6 HELIX 11 11 ASP A 425 LEU A 429 5 5 HELIX 12 12 SER A 445 GLU A 450 5 6 SHEET 1 A 5 ILE A 323 LYS A 327 0 SHEET 2 A 5 LYS A 297 ASP A 302 1 N VAL A 298 O THR A 324 SHEET 3 A 5 VAL A 275 VAL A 279 1 N VAL A 276 O LEU A 299 SHEET 4 A 5 VAL A 340 ILE A 344 1 O VAL A 342 N LEU A 277 SHEET 5 A 5 LEU A 369 TYR A 376 1 O ALA A 370 N VAL A 340 SHEET 1 B 5 VAL A 420 GLU A 422 0 SHEET 2 B 5 GLN A 499 VAL A 510 -1 O VAL A 501 N VAL A 420 SHEET 3 B 5 SER A 463 PHE A 476 -1 N GLY A 470 O THR A 500 SHEET 4 B 5 ILE A 379 VAL A 387 -1 N VAL A 385 O ALA A 469 SHEET 5 B 5 CYS A 434 ASP A 440 -1 O ILE A 436 N ILE A 382 SHEET 1 C 4 VAL A 420 GLU A 422 0 SHEET 2 C 4 GLN A 499 VAL A 510 -1 O VAL A 501 N VAL A 420 SHEET 3 C 4 SER A 463 PHE A 476 -1 N GLY A 470 O THR A 500 SHEET 4 C 4 VAL A 484 SER A 487 -1 O VAL A 484 N PHE A 476 SHEET 1 D 4 PHE A 451 LYS A 458 0 SHEET 2 D 4 ALA A 515 HIS A 523 -1 O LEU A 516 N LEU A 457 SHEET 3 D 4 THR A 533 LEU A 538 -1 O THR A 535 N THR A 521 SHEET 4 D 4 SER A 541 GLY A 546 -1 O TYR A 545 N VAL A 534 CISPEP 1 TYR A 376 PRO A 377 0 -0.66 SITE 1 AC1 11 GLY A 245 GLU A 248 ASP A 389 LYS A 392 SITE 2 AC1 11 HIS A 393 ARG A 396 VAL A 420 GLU A 422 SITE 3 AC1 11 THR A 466 ALA A 467 HOH A 775 SITE 1 AC2 3 TYR A 265 PRO A 268 LYS A 292 SITE 1 AC3 3 TYR A 471 GLN A 491 HOH A 710 CRYST1 70.319 70.319 172.918 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014221 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014221 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005783 0.00000