PDB Short entry for 4QXE HEADER MEMBRANE PROTEIN 20-JUL-14 4QXE TITLE CRYSTAL STRUCTURE OF LGR4 FUSED WITH HAGFISH VLR COMPND MOL_ID: 1; COMPND 2 MOLECULE: LEUCINE-RICH REPEAT-CONTAINING G-PROTEIN COUPLED RECEPTOR COMPND 3 4, LINKER, VARIABLE LYMPHOCYTE RECEPTOR B; COMPND 4 CHAIN: A; COMPND 5 FRAGMENT: R-SPONDIN RECEPTOR, UNP RESIDUES 27-396, UNP RESIDUES 133- COMPND 6 200; COMPND 7 SYNONYM: G-PROTEIN COUPLED RECEPTOR 48; COMPND 8 ENGINEERED: YES; COMPND 9 MUTATION: YES; COMPND 10 OTHER_DETAILS: CHIMERA OF (LEUCINE-RICH REPEAT-CONTAINING G-PROTEIN COMPND 11 COUPLED RECEPTOR 4, LINKER, VARIABLE LYMPHOCYTE RECEPTOR B) SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS, EPTATRETUS BURGERI; SOURCE 3 ORGANISM_COMMON: HUMAN, INSHORE HAGFISH; SOURCE 4 ORGANISM_TAXID: 9606, 7764; SOURCE 5 STRAIN: HUMAN; SOURCE 6 GENE: GPR48, LGR4, VLRB; SOURCE 7 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: SF9; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: VIRUS; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PFASTBAC1 KEYWDS LRR REPEATS, RECEPTOR, R-SPONDINS, GLYCOSYLATION, MEMBRANE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.G.XU,C.HUANG,Y.ZHU REVDAT 4 08-NOV-23 4QXE 1 HETSYN REVDAT 3 29-JUL-20 4QXE 1 COMPND REMARK DBREF SEQADV REVDAT 3 2 1 HETNAM LINK SITE REVDAT 2 28-JUN-17 4QXE 1 SOURCE REVDAT 1 22-OCT-14 4QXE 0 JRNL AUTH J.G.XU,C.HUANG,Y.ZHOU,Y.ZHU JRNL TITL CRYSTAL STRUCTURE OF LGR4 FUSED WITH HAGFISH VLR JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.0 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 41778 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.210 REMARK 3 R VALUE (WORKING SET) : 0.209 REMARK 3 FREE R VALUE : 0.237 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2222 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.26 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3068 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.84 REMARK 3 BIN R VALUE (WORKING SET) : 0.2330 REMARK 3 BIN FREE R VALUE SET COUNT : 150 REMARK 3 BIN FREE R VALUE : 0.2730 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3435 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 55 REMARK 3 SOLVENT ATOMS : 312 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.05 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.178 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.161 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.106 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.052 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.937 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.920 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3583 ; 0.006 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4873 ; 1.123 ; 1.995 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 442 ; 4.927 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 155 ;40.773 ;25.290 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 606 ;16.135 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 16 ;19.578 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 571 ; 0.070 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2670 ; 0.003 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2214 ; 0.385 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3584 ; 0.765 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1369 ; 1.183 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1289 ; 2.182 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4QXE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 24-JUL-14. REMARK 100 THE DEPOSITION ID IS D_1000086633. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-APR-13 REMARK 200 TEMPERATURE (KELVIN) : 95 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : SAGITALLY FOCUSED SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 44070 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 28.10 REMARK 200 R MERGE (I) : 0.11600 REMARK 200 R SYM (I) : 0.11600 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 4.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.29 REMARK 200 COMPLETENESS FOR SHELL (%) : 69.6 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASES REMARK 200 STARTING MODEL: 3V44 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 72.48 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.47 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M HEPES PH 7.5, 2.0M AMMONIUM REMARK 280 SULFATE, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 21 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 13555 X+1/2,Y+1/2,Z+1/2 REMARK 290 14555 -X,-Y+1/2,Z REMARK 290 15555 -X+1/2,Y,-Z REMARK 290 16555 X,-Y,-Z+1/2 REMARK 290 17555 Z+1/2,X+1/2,Y+1/2 REMARK 290 18555 Z,-X,-Y+1/2 REMARK 290 19555 -Z,-X+1/2,Y REMARK 290 20555 -Z+1/2,X,-Y REMARK 290 21555 Y+1/2,Z+1/2,X+1/2 REMARK 290 22555 -Y+1/2,Z,-X REMARK 290 23555 Y,-Z,-X+1/2 REMARK 290 24555 -Y,-Z+1/2,X REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 86.87950 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 86.87950 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 86.87950 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 86.87950 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 86.87950 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 86.87950 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 86.87950 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 86.87950 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 86.87950 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 86.87950 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 86.87950 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 86.87950 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 86.87950 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 86.87950 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 86.87950 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 86.87950 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 86.87950 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 86.87950 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 86.87950 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 86.87950 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 86.87950 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 86.87950 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 86.87950 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 86.87950 REMARK 290 SMTRY1 17 0.000000 0.000000 1.000000 86.87950 REMARK 290 SMTRY2 17 1.000000 0.000000 0.000000 86.87950 REMARK 290 SMTRY3 17 0.000000 1.000000 0.000000 86.87950 REMARK 290 SMTRY1 18 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 18 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 18 0.000000 -1.000000 0.000000 86.87950 REMARK 290 SMTRY1 19 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 19 -1.000000 0.000000 0.000000 86.87950 REMARK 290 SMTRY3 19 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 20 0.000000 0.000000 -1.000000 86.87950 REMARK 290 SMTRY2 20 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 20 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 21 0.000000 1.000000 0.000000 86.87950 REMARK 290 SMTRY2 21 0.000000 0.000000 1.000000 86.87950 REMARK 290 SMTRY3 21 1.000000 0.000000 0.000000 86.87950 REMARK 290 SMTRY1 22 0.000000 -1.000000 0.000000 86.87950 REMARK 290 SMTRY2 22 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 22 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 23 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 23 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 23 -1.000000 0.000000 0.000000 86.87950 REMARK 290 SMTRY1 24 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 24 0.000000 0.000000 -1.000000 86.87950 REMARK 290 SMTRY3 24 1.000000 0.000000 0.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 29 -161.57 -125.59 REMARK 500 ASN A 67 -161.49 -106.77 REMARK 500 ASP A 92 56.02 -114.45 REMARK 500 ASN A 115 -164.15 -124.66 REMARK 500 ASN A 139 -148.21 -104.00 REMARK 500 PHE A 149 3.91 80.35 REMARK 500 ASN A 163 -147.56 -129.23 REMARK 500 ASN A 187 -151.89 -124.79 REMARK 500 ASN A 211 -152.00 -108.31 REMARK 500 ASN A 235 -158.22 -130.74 REMARK 500 ASN A 258 -159.82 -124.02 REMARK 500 THR A 318 68.14 -101.62 REMARK 500 GLN A 342 58.07 -106.31 REMARK 500 ASN A 353 -138.38 -116.29 REMARK 500 ASN A 375 -150.69 -120.92 REMARK 500 ASN A 399 -153.97 -129.47 REMARK 500 CYS A 427 35.87 -92.71 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4QXF RELATED DB: PDB DBREF 4QXE A 27 396 UNP Q9BXB1 LGR4_HUMAN 27 396 DBREF 4QXE A 397 398 PDB 4QXE 4QXE 397 398 DBREF 4QXE A 399 466 UNP Q4G1L2 Q4G1L2_EPTBU 133 200 SEQADV 4QXE MET A 25 UNP Q9BXB1 EXPRESSION TAG SEQADV 4QXE ASP A 26 UNP Q9BXB1 EXPRESSION TAG SEQADV 4QXE GLY A 75 UNP Q9BXB1 ASP 75 ENGINEERED MUTATION SEQADV 4QXE LEU A 467 UNP Q4G1L2 EXPRESSION TAG SEQRES 1 A 443 MET ASP PRO LEU CYS ALA ALA PRO CYS SER CYS ASP GLY SEQRES 2 A 443 ASP ARG ARG VAL ASP CYS SER GLY LYS GLY LEU THR ALA SEQRES 3 A 443 VAL PRO GLU GLY LEU SER ALA PHE THR GLN ALA LEU ASP SEQRES 4 A 443 ILE SER MET ASN ASN ILE THR GLN LEU PRO GLU GLY ALA SEQRES 5 A 443 PHE LYS ASN PHE PRO PHE LEU GLU GLU LEU GLN LEU ALA SEQRES 6 A 443 GLY ASN ASP LEU SER PHE ILE HIS PRO LYS ALA LEU SER SEQRES 7 A 443 GLY LEU LYS GLU LEU LYS VAL LEU THR LEU GLN ASN ASN SEQRES 8 A 443 GLN LEU LYS THR VAL PRO SER GLU ALA ILE ARG GLY LEU SEQRES 9 A 443 SER ALA LEU GLN SER LEU ARG LEU ASP ALA ASN HIS ILE SEQRES 10 A 443 THR SER VAL PRO GLU ASP SER PHE GLU GLY LEU VAL GLN SEQRES 11 A 443 LEU ARG HIS LEU TRP LEU ASP ASP ASN SER LEU THR GLU SEQRES 12 A 443 VAL PRO VAL HIS PRO LEU SER ASN LEU PRO THR LEU GLN SEQRES 13 A 443 ALA LEU THR LEU ALA LEU ASN LYS ILE SER SER ILE PRO SEQRES 14 A 443 ASP PHE ALA PHE THR ASN LEU SER SER LEU VAL VAL LEU SEQRES 15 A 443 HIS LEU HIS ASN ASN LYS ILE ARG SER LEU SER GLN HIS SEQRES 16 A 443 CYS PHE ASP GLY LEU ASP ASN LEU GLU THR LEU ASP LEU SEQRES 17 A 443 ASN TYR ASN ASN LEU GLY GLU PHE PRO GLN ALA ILE LYS SEQRES 18 A 443 ALA LEU PRO SER LEU LYS GLU LEU GLY PHE HIS SER ASN SEQRES 19 A 443 SER ILE SER VAL ILE PRO ASP GLY ALA PHE ASP GLY ASN SEQRES 20 A 443 PRO LEU LEU ARG THR ILE HIS LEU TYR ASP ASN PRO LEU SEQRES 21 A 443 SER PHE VAL GLY ASN SER ALA PHE HIS ASN LEU SER ASP SEQRES 22 A 443 LEU HIS SER LEU VAL ILE ARG GLY ALA SER MET VAL GLN SEQRES 23 A 443 GLN PHE PRO ASN LEU THR GLY THR VAL HIS LEU GLU SER SEQRES 24 A 443 LEU THR LEU THR GLY THR LYS ILE SER SER ILE PRO ASN SEQRES 25 A 443 ASN LEU CYS GLN GLU GLN LYS MET LEU ARG THR LEU ASP SEQRES 26 A 443 LEU SER TYR ASN ASN ILE ARG ASP LEU PRO SER PHE ASN SEQRES 27 A 443 GLY CYS HIS ALA LEU GLU GLU ILE SER LEU GLN ARG ASN SEQRES 28 A 443 GLN ILE TYR GLN ILE LYS GLU GLY THR PHE GLN GLY LEU SEQRES 29 A 443 ILE SER LEU ARG ILE LEU ASP LEU ALA SER ASN GLN LEU SEQRES 30 A 443 LYS SER VAL PRO ASP GLY ILE PHE ASP ARG LEU THR SER SEQRES 31 A 443 LEU GLN LYS ILE TRP LEU HIS THR ASN PRO TRP ASP CYS SEQRES 32 A 443 SER CYS PRO ARG ILE ASP TYR LEU SER ARG TRP LEU ASN SEQRES 33 A 443 LYS ASN SER GLN LYS GLU GLN GLY SER ALA LYS CYS SER SEQRES 34 A 443 GLY SER GLY LYS PRO VAL ARG SER ILE ILE CYS PRO THR SEQRES 35 A 443 LEU MODRES 4QXE ASN A 294 ASN GLYCOSYLATION SITE MODRES 4QXE ASN A 199 ASN GLYCOSYLATION SITE MODRES 4QXE ASN A 68 ASN GLYCOSYLATION SITE HET NAG A 601 14 HET NAG A 602 14 HET NAG A 603 14 HET GOL A 604 6 HET CL A 605 1 HET CL A 606 1 HET SO4 A 607 5 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM GOL GLYCEROL HETNAM CL CHLORIDE ION HETNAM SO4 SULFATE ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 NAG 3(C8 H15 N O6) FORMUL 5 GOL C3 H8 O3 FORMUL 6 CL 2(CL 1-) FORMUL 8 SO4 O4 S 2- FORMUL 9 HOH *312(H2 O) HELIX 1 1 PRO A 169 SER A 174 1 6 HELIX 2 2 PRO A 241 LEU A 247 5 7 HELIX 3 3 ASN A 337 GLN A 342 1 6 HELIX 4 4 ILE A 432 ASN A 442 1 11 HELIX 5 5 PRO A 458 ILE A 462 5 5 SHEET 1 A12 SER A 34 CYS A 35 0 SHEET 2 A12 ARG A 40 ASP A 42 -1 O ASP A 42 N SER A 34 SHEET 3 A12 ALA A 61 ASP A 63 1 O ALA A 61 N VAL A 41 SHEET 4 A12 GLU A 85 GLN A 87 1 O GLU A 85 N LEU A 62 SHEET 5 A12 VAL A 109 THR A 111 1 O VAL A 109 N LEU A 86 SHEET 6 A12 SER A 133 ARG A 135 1 O SER A 133 N LEU A 110 SHEET 7 A12 HIS A 157 TRP A 159 1 O TRP A 159 N LEU A 134 SHEET 8 A12 ALA A 181 THR A 183 1 O ALA A 181 N LEU A 158 SHEET 9 A12 VAL A 205 HIS A 207 1 O HIS A 207 N LEU A 182 SHEET 10 A12 THR A 229 ASP A 231 1 O ASP A 231 N LEU A 206 SHEET 11 A12 GLU A 252 GLY A 254 1 O GLY A 254 N LEU A 230 SHEET 12 A12 THR A 276 HIS A 278 1 O HIS A 278 N LEU A 253 SHEET 1 B 2 GLN A 71 LEU A 72 0 SHEET 2 B 2 PHE A 95 ILE A 96 1 O PHE A 95 N LEU A 72 SHEET 1 C 2 SER A 191 ILE A 192 0 SHEET 2 C 2 SER A 215 LEU A 216 1 O SER A 215 N ILE A 192 SHEET 1 D 2 VAL A 262 ILE A 263 0 SHEET 2 D 2 PHE A 286 VAL A 287 1 O PHE A 286 N ILE A 263 SHEET 1 E 7 SER A 300 ARG A 304 0 SHEET 2 E 7 SER A 323 THR A 327 1 O THR A 325 N LEU A 301 SHEET 3 E 7 THR A 347 ASP A 349 1 O ASP A 349 N LEU A 324 SHEET 4 E 7 GLU A 369 SER A 371 1 O GLU A 369 N LEU A 348 SHEET 5 E 7 ILE A 393 ASP A 395 1 O ASP A 395 N ILE A 370 SHEET 6 E 7 LYS A 417 TRP A 419 1 O TRP A 419 N LEU A 394 SHEET 7 E 7 GLU A 446 GLN A 447 1 O GLN A 447 N ILE A 418 SSBOND 1 CYS A 29 CYS A 35 1555 1555 2.04 SSBOND 2 CYS A 33 CYS A 43 1555 1555 2.05 SSBOND 3 CYS A 339 CYS A 364 1555 1555 2.03 SSBOND 4 CYS A 427 CYS A 452 1555 1555 2.03 SSBOND 5 CYS A 429 CYS A 464 1555 1555 2.04 LINK ND2 ASN A 68 C1 NAG A 602 1555 1555 1.45 LINK ND2 ASN A 199 C1 NAG A 601 1555 1555 1.44 LINK ND2 ASN A 294 C1 NAG A 603 1555 1555 1.44 CISPEP 1 ALA A 31 PRO A 32 0 3.56 CISPEP 2 CYS A 429 PRO A 430 0 6.14 CRYST1 173.759 173.759 173.759 90.00 90.00 90.00 I 21 3 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005755 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005755 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005755 0.00000