PDB Short entry for 4R3R HEADER TRANSFERASE 17-AUG-14 4R3R TITLE CRYSTAL STRUCTURES OF EGFR IN COMPLEX WITH MIG6 COMPND MOL_ID: 1; COMPND 2 MOLECULE: EPIDERMAL GROWTH FACTOR RECEPTOR; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: KINASE DOMAIN (UNP RESIDUES 696-1018); COMPND 5 SYNONYM: PROTO-ONCOGENE C-ERBB-1, RECEPTOR TYROSINE-PROTEIN KINASE COMPND 6 ERBB-1; COMPND 7 EC: 2.7.10.1; COMPND 8 ENGINEERED: YES; COMPND 9 MUTATION: YES; COMPND 10 MOL_ID: 2; COMPND 11 MOLECULE: PEPTIDE FROM ERBB RECEPTOR FEEDBACK INHIBITOR 1'; COMPND 12 CHAIN: B; COMPND 13 FRAGMENT: SEGMENT 2 (UNP RESIDUES 392-398); COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: EGFR, ERBB, ERBB1, ERBB1(EGFR), HER1; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: SF9; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PTRIEX; SOURCE 10 MOL_ID: 2; SOURCE 11 SYNTHETIC: YES; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_COMMON: HUMAN; SOURCE 14 ORGANISM_TAXID: 9606 KEYWDS KINASE, PHOPHORYLATION, ATP HYDROLYSIS, MIG6, PHOSPHORYLATION, KEYWDS 2 TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR E.PARK,N.KIM,Z.YI,A.CHO,K.KIM,S.B.FICARRO,A.PARK,W.Y.PARK,B.MURRAY, AUTHOR 2 M.MEYERSON,R.BEROUKIM,J.A.MARTO,J.CHO,M.J.ECK REVDAT 3 16-SEP-15 4R3R 1 JRNL REVDAT 2 26-AUG-15 4R3R 1 JRNL REVDAT 1 12-AUG-15 4R3R 0 JRNL AUTH E.PARK,N.KIM,S.B.FICARRO,Y.ZHANG,B.I.LEE,A.CHO,K.KIM, JRNL AUTH 2 A.K.PARK,W.Y.PARK,B.MURRAY,M.MEYERSON,R.BEROUKHIM,J.A.MARTO, JRNL AUTH 3 J.CHO,M.J.ECK JRNL TITL STRUCTURE AND MECHANISM OF ACTIVITY-BASED INHIBITION OF THE JRNL TITL 2 EGF RECEPTOR BY MIG6. JRNL REF NAT.STRUCT.MOL.BIOL. V. 22 703 2015 JRNL REFN ISSN 1545-9993 JRNL PMID 26280531 JRNL DOI 10.1038/NSMB.3074 REMARK 2 REMARK 2 RESOLUTION. 3.25 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.9_1692) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE- REMARK 3 : KUNSTLEVE,LI-WEI HUNG,ROBERT IMMORMINO, REMARK 3 : TOM IOERGER,AIRLIE MCCOY,ERIK MCKEE,NIGEL REMARK 3 : MORIARTY,REETAL PAI,RANDY READ,JANE REMARK 3 : RICHARDSON,DAVID RICHARDSON,TOD ROMO,JIM REMARK 3 : SACCHETTINI,NICHOLAS SAUTER,JACOB SMITH, REMARK 3 : LAURENT STORONI,TOM TERWILLIGER,PETER REMARK 3 : ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.25 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.76 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 87.8 REMARK 3 NUMBER OF REFLECTIONS : 7110 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.201 REMARK 3 R VALUE (WORKING SET) : 0.196 REMARK 3 FREE R VALUE : 0.247 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.200 REMARK 3 FREE R VALUE TEST SET COUNT : 725 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.7592 - 5.5548 0.82 1230 143 0.1815 0.2404 REMARK 3 2 5.5548 - 4.4101 0.86 1252 148 0.1745 0.2430 REMARK 3 3 4.4101 - 3.8530 0.89 1282 142 0.1923 0.2287 REMARK 3 4 3.8530 - 3.5009 0.91 1313 149 0.2146 0.2509 REMARK 3 5 3.5009 - 3.2500 0.92 1308 143 0.2773 0.3081 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.420 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.470 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 82.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 2565 REMARK 3 ANGLE : 0.947 3476 REMARK 3 CHIRALITY : 0.041 390 REMARK 3 PLANARITY : 0.004 436 REMARK 3 DIHEDRAL : 14.037 957 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: all REMARK 3 ORIGIN FOR THE GROUP (A): -57.0304 -8.2123 -25.1780 REMARK 3 T TENSOR REMARK 3 T11: 0.4863 T22: 0.4768 REMARK 3 T33: 0.3905 T12: -0.0043 REMARK 3 T13: 0.0042 T23: 0.0053 REMARK 3 L TENSOR REMARK 3 L11: 0.9600 L22: 1.5886 REMARK 3 L33: 0.8524 L12: 0.6114 REMARK 3 L13: -0.5994 L23: -0.9442 REMARK 3 S TENSOR REMARK 3 S11: -0.0341 S12: -0.0658 S13: -0.0071 REMARK 3 S21: -0.1311 S22: -0.0966 S23: -0.1453 REMARK 3 S31: 0.0275 S32: 0.1767 S33: 0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4R3R COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-AUG-14. REMARK 100 THE RCSB ID CODE IS RCSB086861. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-NOV-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97920 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 7110 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.260 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 87.8 REMARK 200 DATA REDUNDANCY : 4.100 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.25 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.50 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASES REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.96 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.32 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 40% PEG400, 0.15M SODIUM CHLORIDE, REMARK 280 0.1M HEPES, PH 7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z,-X,-Y REMARK 290 7555 -Z,-X,Y REMARK 290 8555 -Z,X,-Y REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z,-X REMARK 290 11555 Y,-Z,-X REMARK 290 12555 -Y,-Z,X REMARK 290 13555 X+1/2,Y+1/2,Z+1/2 REMARK 290 14555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 15555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 16555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 17555 Z+1/2,X+1/2,Y+1/2 REMARK 290 18555 Z+1/2,-X+1/2,-Y+1/2 REMARK 290 19555 -Z+1/2,-X+1/2,Y+1/2 REMARK 290 20555 -Z+1/2,X+1/2,-Y+1/2 REMARK 290 21555 Y+1/2,Z+1/2,X+1/2 REMARK 290 22555 -Y+1/2,Z+1/2,-X+1/2 REMARK 290 23555 Y+1/2,-Z+1/2,-X+1/2 REMARK 290 24555 -Y+1/2,-Z+1/2,X+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 72.34450 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 72.34450 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 72.34450 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 72.34450 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 72.34450 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 72.34450 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 72.34450 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 72.34450 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 72.34450 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 72.34450 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 72.34450 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 72.34450 REMARK 290 SMTRY1 17 0.000000 0.000000 1.000000 72.34450 REMARK 290 SMTRY2 17 1.000000 0.000000 0.000000 72.34450 REMARK 290 SMTRY3 17 0.000000 1.000000 0.000000 72.34450 REMARK 290 SMTRY1 18 0.000000 0.000000 1.000000 72.34450 REMARK 290 SMTRY2 18 -1.000000 0.000000 0.000000 72.34450 REMARK 290 SMTRY3 18 0.000000 -1.000000 0.000000 72.34450 REMARK 290 SMTRY1 19 0.000000 0.000000 -1.000000 72.34450 REMARK 290 SMTRY2 19 -1.000000 0.000000 0.000000 72.34450 REMARK 290 SMTRY3 19 0.000000 1.000000 0.000000 72.34450 REMARK 290 SMTRY1 20 0.000000 0.000000 -1.000000 72.34450 REMARK 290 SMTRY2 20 1.000000 0.000000 0.000000 72.34450 REMARK 290 SMTRY3 20 0.000000 -1.000000 0.000000 72.34450 REMARK 290 SMTRY1 21 0.000000 1.000000 0.000000 72.34450 REMARK 290 SMTRY2 21 0.000000 0.000000 1.000000 72.34450 REMARK 290 SMTRY3 21 1.000000 0.000000 0.000000 72.34450 REMARK 290 SMTRY1 22 0.000000 -1.000000 0.000000 72.34450 REMARK 290 SMTRY2 22 0.000000 0.000000 1.000000 72.34450 REMARK 290 SMTRY3 22 -1.000000 0.000000 0.000000 72.34450 REMARK 290 SMTRY1 23 0.000000 1.000000 0.000000 72.34450 REMARK 290 SMTRY2 23 0.000000 0.000000 -1.000000 72.34450 REMARK 290 SMTRY3 23 -1.000000 0.000000 0.000000 72.34450 REMARK 290 SMTRY1 24 0.000000 -1.000000 0.000000 72.34450 REMARK 290 SMTRY2 24 0.000000 0.000000 -1.000000 72.34450 REMARK 290 SMTRY3 24 1.000000 0.000000 0.000000 72.34450 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 930 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15810 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -12.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 749 REMARK 465 SER A 991 REMARK 465 PRO A 992 REMARK 465 THR A 993 REMARK 465 ASP A 994 REMARK 465 SER A 995 REMARK 465 ASN A 996 REMARK 465 PHE A 997 REMARK 465 TYR A 998 REMARK 465 ARG A 999 REMARK 465 ALA A 1000 REMARK 465 LEU A 1001 REMARK 465 MET A 1002 REMARK 465 GLU A 1005 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 697 CD OE1 OE2 REMARK 470 ARG A 748 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 865 CG CD OE1 OE2 REMARK 470 LYS A 867 CG CD CE NZ REMARK 470 ARG A 986 CG CD NE CZ NH1 NH2 REMARK 470 HIS A 988 CG ND1 CD2 CE1 NE2 REMARK 470 MET A1007 CG SD CE REMARK 470 ILE A1018 CG1 CG2 CD1 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLU A 709 CD REMARK 480 GLU A 734 CD REMARK 480 GLU A 758 CD OE1 REMARK 480 GLU A 804 CD REMARK 480 GLN A 812 CD REMARK 480 GLU A 922 CD REMARK 480 GLU A 931 CD REMARK 480 ASP A 956 CG REMARK 480 GLN A 982 CG REMARK 480 GLU A 985 CD REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 734 108.13 -54.24 REMARK 500 ASP A 837 39.55 -155.05 REMARK 500 ASP A 855 75.69 58.15 REMARK 500 MET A1007 30.30 -95.75 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLU A 746 LEU A 747 -149.17 REMARK 500 GLU A 758 ILE A 759 141.68 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1103 DISTANCE = 5.17 ANGSTROMS REMARK 525 HOH A1105 DISTANCE = 5.23 ANGSTROMS REMARK 525 HOH A1109 DISTANCE = 5.58 ANGSTROMS REMARK 525 HOH A1111 DISTANCE = 7.05 ANGSTROMS REMARK 525 HOH A1116 DISTANCE = 6.09 ANGSTROMS REMARK 525 HOH A1122 DISTANCE = 5.09 ANGSTROMS REMARK 525 HOH A1135 DISTANCE = 7.25 ANGSTROMS REMARK 525 HOH A1147 DISTANCE = 5.75 ANGSTROMS REMARK 525 HOH A1148 DISTANCE = 7.03 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4R3P RELATED DB: PDB DBREF 4R3R A 696 1018 UNP P00533 EGFR_HUMAN 696 1018 DBREF 4R3R B 392 398 UNP Q9UJM3 ERRFI_HUMAN 392 398 SEQADV 4R3R ARG A 858 UNP P00533 LEU 858 ENGINEERED MUTATION SEQRES 1 A 323 GLY GLU ALA PRO ASN GLN ALA LEU LEU ARG ILE LEU LYS SEQRES 2 A 323 GLU THR GLU PHE LYS LYS ILE LYS VAL LEU GLY SER GLY SEQRES 3 A 323 ALA PHE GLY THR VAL TYR LYS GLY LEU TRP ILE PRO GLU SEQRES 4 A 323 GLY GLU LYS VAL LYS ILE PRO VAL ALA ILE LYS GLU LEU SEQRES 5 A 323 ARG GLU ALA THR SER PRO LYS ALA ASN LYS GLU ILE LEU SEQRES 6 A 323 ASP GLU ALA TYR VAL MET ALA SER VAL ASP ASN PRO HIS SEQRES 7 A 323 VAL CYS ARG LEU LEU GLY ILE CYS LEU THR SER THR VAL SEQRES 8 A 323 GLN LEU ILE THR GLN LEU MET PRO PHE GLY CYS LEU LEU SEQRES 9 A 323 ASP TYR VAL ARG GLU HIS LYS ASP ASN ILE GLY SER GLN SEQRES 10 A 323 TYR LEU LEU ASN TRP CYS VAL GLN ILE ALA LYS GLY MET SEQRES 11 A 323 ASN TYR LEU GLU ASP ARG ARG LEU VAL HIS ARG ASP LEU SEQRES 12 A 323 ALA ALA ARG ASN VAL LEU VAL LYS THR PRO GLN HIS VAL SEQRES 13 A 323 LYS ILE THR ASP PHE GLY ARG ALA LYS LEU LEU GLY ALA SEQRES 14 A 323 GLU GLU LYS GLU TYR HIS ALA GLU GLY GLY LYS VAL PRO SEQRES 15 A 323 ILE LYS TRP MET ALA LEU GLU SER ILE LEU HIS ARG ILE SEQRES 16 A 323 TYR THR HIS GLN SER ASP VAL TRP SER TYR GLY VAL THR SEQRES 17 A 323 VAL TRP GLU LEU MET THR PHE GLY SER LYS PRO TYR ASP SEQRES 18 A 323 GLY ILE PRO ALA SER GLU ILE SER SER ILE LEU GLU LYS SEQRES 19 A 323 GLY GLU ARG LEU PRO GLN PRO PRO ILE CYS THR ILE ASP SEQRES 20 A 323 VAL TYR MET ILE MET VAL LYS CYS TRP MET ILE ASP ALA SEQRES 21 A 323 ASP SER ARG PRO LYS PHE ARG GLU LEU ILE ILE GLU PHE SEQRES 22 A 323 SER LYS MET ALA ARG ASP PRO GLN ARG TYR LEU VAL ILE SEQRES 23 A 323 GLN GLY ASP GLU ARG MET HIS LEU PRO SER PRO THR ASP SEQRES 24 A 323 SER ASN PHE TYR ARG ALA LEU MET ASP GLU GLU ASP MET SEQRES 25 A 323 ASP ASP VAL VAL ASP ALA ASP GLU TYR LEU ILE SEQRES 1 B 7 THR HIS PTR PTR LEU LEU PRO MODRES 4R3R PTR B 394 TYR O-PHOSPHOTYROSINE MODRES 4R3R PTR B 395 TYR O-PHOSPHOTYROSINE HET PTR B 394 16 HET PTR B 395 16 HETNAM PTR O-PHOSPHOTYROSINE HETSYN PTR PHOSPHONOTYROSINE FORMUL 2 PTR 2(C9 H12 N O6 P) FORMUL 3 HOH *49(H2 O) HELIX 1 1 LYS A 708 THR A 710 5 3 HELIX 2 2 SER A 752 GLU A 758 1 7 HELIX 3 3 ILE A 759 VAL A 769 1 11 HELIX 4 4 LEU A 798 HIS A 805 1 8 HELIX 5 5 GLY A 810 ARG A 831 1 22 HELIX 6 6 ALA A 839 ARG A 841 5 3 HELIX 7 7 PRO A 877 MET A 881 5 5 HELIX 8 8 ALA A 882 ARG A 889 1 8 HELIX 9 9 THR A 892 THR A 909 1 18 HELIX 10 10 PRO A 919 SER A 921 5 3 HELIX 11 11 GLU A 922 GLY A 930 1 9 HELIX 12 12 THR A 940 TRP A 951 1 12 HELIX 13 13 ASP A 954 ARG A 958 5 5 HELIX 14 14 LYS A 960 ARG A 973 1 14 HELIX 15 15 ASP A 974 LEU A 979 1 6 HELIX 16 16 GLY A 983 MET A 987 5 5 HELIX 17 17 ASP A 1012 TYR A 1016 5 5 SHEET 1 A 5 PHE A 712 GLY A 721 0 SHEET 2 A 5 GLY A 724 TRP A 731 -1 O LYS A 728 N LYS A 716 SHEET 3 A 5 ILE A 740 GLU A 746 -1 O ILE A 744 N TYR A 727 SHEET 4 A 5 GLN A 787 GLN A 791 -1 O THR A 790 N ALA A 743 SHEET 5 A 5 LEU A 777 CYS A 781 -1 N CYS A 781 O GLN A 787 SHEET 1 B 3 GLY A 796 CYS A 797 0 SHEET 2 B 3 VAL A 843 THR A 847 -1 O VAL A 845 N GLY A 796 SHEET 3 B 3 HIS A 850 ILE A 853 -1 O LYS A 852 N LEU A 844 SHEET 1 C 2 LEU A 833 VAL A 834 0 SHEET 2 C 2 LYS A 860 LEU A 861 -1 O LYS A 860 N VAL A 834 SHEET 1 D 2 TYR A 869 HIS A 870 0 SHEET 2 D 2 ILE A 890 TYR A 891 -1 O TYR A 891 N TYR A 869 LINK C HIS B 393 N PTR B 394 1555 1555 1.33 LINK C PTR B 394 N PTR B 395 1555 1555 1.33 LINK C PTR B 395 N LEU B 396 1555 1555 1.33 CRYST1 144.689 144.689 144.689 90.00 90.00 90.00 I 2 3 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006911 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006911 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006911 0.00000