PDB Short entry for 4R8U HEADER TRANSFERASE/DNA 03-SEP-14 4R8U TITLE S-SAD STRUCTURE OF DINB-DNA COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA POLYMERASE IV; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 2-340; COMPND 5 SYNONYM: POL IV; COMPND 6 EC: 2.7.7.7; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: DNA POLYMERASE IV; COMPND 10 CHAIN: B; COMPND 11 FRAGMENT: UNP RESIDUES 2-338; COMPND 12 SYNONYM: POL IV; COMPND 13 EC: 2.7.7.7; COMPND 14 ENGINEERED: YES; COMPND 15 MOL_ID: 3; COMPND 16 MOLECULE: DNA; COMPND 17 CHAIN: V, C; COMPND 18 ENGINEERED: YES; COMPND 19 MOL_ID: 4; COMPND 20 MOLECULE: DNA; COMPND 21 CHAIN: W; COMPND 22 ENGINEERED: YES; COMPND 23 MOL_ID: 5; COMPND 24 MOLECULE: DNA; COMPND 25 CHAIN: D; COMPND 26 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI K-12; SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 STRAIN: K12; SOURCE 5 GENE: B0231, DINB, DINP, JW0221; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: C41DE3; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PGEX6P1; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI K-12; SOURCE 12 ORGANISM_TAXID: 83333; SOURCE 13 STRAIN: K12; SOURCE 14 GENE: B0231, DINB, DINP, JW0221; SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 17 EXPRESSION_SYSTEM_STRAIN: C41DE3; SOURCE 18 EXPRESSION_SYSTEM_VECTOR_TYPE: PGEX6P1; SOURCE 19 MOL_ID: 3; SOURCE 20 SYNTHETIC: YES; SOURCE 21 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 22 ORGANISM_TAXID: 32630; SOURCE 23 OTHER_DETAILS: SYNTHETIC OLIGONUCLEOTIDE; SOURCE 24 MOL_ID: 4; SOURCE 25 SYNTHETIC: YES; SOURCE 26 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 27 ORGANISM_TAXID: 32630; SOURCE 28 OTHER_DETAILS: SYNTHETIC OLIGONUCLEOTIDE; SOURCE 29 MOL_ID: 5; SOURCE 30 SYNTHETIC: YES; SOURCE 31 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 32 ORGANISM_TAXID: 32630; SOURCE 33 OTHER_DETAILS: SYNTHETIC OLIGONUCLEOTIDE KEYWDS NUCLEOTIDYL TRANSFERASE, DNA POLYMERASE, TRANSFERASE-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR J.KOTTUR,D.T.NAIR,T.WEINERT,V.OLIGERIC,M.WANG REVDAT 5 20-MAR-24 4R8U 1 REMARK SEQADV LINK REVDAT 4 22-NOV-17 4R8U 1 REMARK REVDAT 3 02-SEP-15 4R8U 1 SOURCE REVDAT 2 12-AUG-15 4R8U 1 JRNL REVDAT 1 14-JAN-15 4R8U 0 JRNL AUTH T.WEINERT,V.OLIERIC,S.WALTERSPERGER,E.PANEPUCCI,L.CHEN, JRNL AUTH 2 H.ZHANG,D.ZHOU,J.ROSE,A.EBIHARA,S.KURAMITSU,D.LI,N.HOWE, JRNL AUTH 3 G.SCHNAPP,A.PAUTSCH,K.BARGSTEN,A.E.PROTA,P.SURANA,J.KOTTUR, JRNL AUTH 4 D.T.NAIR,F.BASILICO,V.CECATIELLO,S.PASQUALATO,A.BOLAND, JRNL AUTH 5 O.WEICHENRIEDER,B.C.WANG,M.O.STEINMETZ,M.CAFFREY,M.WANG JRNL TITL FAST NATIVE-SAD PHASING FOR ROUTINE MACROMOLECULAR STRUCTURE JRNL TITL 2 DETERMINATION JRNL REF NAT.METHODS V. 12 131 2015 JRNL REFN ISSN 1548-7091 JRNL PMID 25506719 JRNL DOI 10.1038/NMETH.3211 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.9_1692) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.23 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.920 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 93883 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.183 REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.220 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 4705 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.3394 - 7.1392 1.00 2969 161 0.1310 0.1431 REMARK 3 2 7.1392 - 5.6694 1.00 2995 158 0.1709 0.2020 REMARK 3 3 5.6694 - 4.9536 1.00 2978 162 0.1475 0.1917 REMARK 3 4 4.9536 - 4.5010 1.00 3000 159 0.1391 0.1620 REMARK 3 5 4.5010 - 4.1786 1.00 2984 157 0.1385 0.1671 REMARK 3 6 4.1786 - 3.9324 1.00 3015 160 0.1557 0.1988 REMARK 3 7 3.9324 - 3.7355 1.00 2975 158 0.1690 0.1806 REMARK 3 8 3.7355 - 3.5730 1.00 2929 155 0.1876 0.2616 REMARK 3 9 3.5730 - 3.4355 1.00 3043 159 0.1931 0.2743 REMARK 3 10 3.4355 - 3.3169 1.00 2985 158 0.1983 0.2444 REMARK 3 11 3.3169 - 3.2132 1.00 2975 160 0.2038 0.2235 REMARK 3 12 3.2132 - 3.1214 1.00 2990 160 0.2086 0.2657 REMARK 3 13 3.1214 - 3.0393 1.00 2988 160 0.2198 0.2638 REMARK 3 14 3.0393 - 2.9651 1.00 2973 156 0.2249 0.2813 REMARK 3 15 2.9651 - 2.8977 1.00 2969 156 0.2369 0.2819 REMARK 3 16 2.8977 - 2.8361 1.00 3027 158 0.2525 0.3452 REMARK 3 17 2.8361 - 2.7793 1.00 3028 158 0.2405 0.2870 REMARK 3 18 2.7793 - 2.7269 1.00 2909 153 0.2468 0.3235 REMARK 3 19 2.7269 - 2.6782 1.00 3059 159 0.2431 0.2991 REMARK 3 20 2.6782 - 2.6328 1.00 2970 156 0.2399 0.3463 REMARK 3 21 2.6328 - 2.5903 1.00 2988 159 0.2455 0.2933 REMARK 3 22 2.5903 - 2.5505 1.00 3013 154 0.2283 0.3091 REMARK 3 23 2.5505 - 2.5130 1.00 2985 157 0.2359 0.2631 REMARK 3 24 2.5130 - 2.4776 1.00 2878 152 0.2411 0.3090 REMARK 3 25 2.4776 - 2.4441 1.00 3087 163 0.2500 0.3042 REMARK 3 26 2.4441 - 2.4124 1.00 2961 159 0.2613 0.2863 REMARK 3 27 2.4124 - 2.3822 0.99 2955 154 0.2632 0.3374 REMARK 3 28 2.3822 - 2.3535 0.98 2920 152 0.2800 0.2956 REMARK 3 29 2.3535 - 2.3261 0.97 2955 153 0.3080 0.3544 REMARK 3 30 2.3261 - 2.3000 0.90 2675 139 0.3278 0.3988 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.330 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.160 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 7040 REMARK 3 ANGLE : 1.361 9810 REMARK 3 CHIRALITY : 0.046 1099 REMARK 3 PLANARITY : 0.007 1024 REMARK 3 DIHEDRAL : 20.964 2774 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 14 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 3 THROUGH 82 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.3171 33.9742 40.1577 REMARK 3 T TENSOR REMARK 3 T11: 0.4215 T22: 0.3553 REMARK 3 T33: 0.5526 T12: 0.0207 REMARK 3 T13: -0.1191 T23: -0.0636 REMARK 3 L TENSOR REMARK 3 L11: 3.9281 L22: 4.5915 REMARK 3 L33: 1.6944 L12: -0.7423 REMARK 3 L13: 0.3883 L23: 0.6512 REMARK 3 S TENSOR REMARK 3 S11: -0.2608 S12: 0.2101 S13: 0.5429 REMARK 3 S21: -0.2654 S22: -0.0743 S23: -0.0429 REMARK 3 S31: -0.3115 S32: -0.1836 S33: 0.2870 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 83 THROUGH 242 ) REMARK 3 ORIGIN FOR THE GROUP (A): 37.9256 18.8534 50.6130 REMARK 3 T TENSOR REMARK 3 T11: 0.3953 T22: 0.3438 REMARK 3 T33: 0.7130 T12: -0.0118 REMARK 3 T13: -0.0259 T23: -0.0776 REMARK 3 L TENSOR REMARK 3 L11: 1.7520 L22: 1.7381 REMARK 3 L33: 4.2910 L12: 0.0202 REMARK 3 L13: 0.2787 L23: -0.9644 REMARK 3 S TENSOR REMARK 3 S11: -0.1320 S12: 0.0198 S13: -0.1942 REMARK 3 S21: 0.0601 S22: 0.0731 S23: -0.5251 REMARK 3 S31: 0.1000 S32: 0.1250 S33: 0.0754 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 243 THROUGH 339 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.0401 15.4975 46.0300 REMARK 3 T TENSOR REMARK 3 T11: 0.3654 T22: 0.8363 REMARK 3 T33: 0.4661 T12: -0.1248 REMARK 3 T13: 0.0278 T23: -0.1815 REMARK 3 L TENSOR REMARK 3 L11: 4.8021 L22: 4.2046 REMARK 3 L33: 3.1608 L12: -1.5909 REMARK 3 L13: -0.4522 L23: -0.4642 REMARK 3 S TENSOR REMARK 3 S11: -0.2146 S12: -0.6817 S13: 0.1862 REMARK 3 S21: -0.1082 S22: 0.2315 S23: 0.1927 REMARK 3 S31: 0.2420 S32: -0.9801 S33: 0.0128 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 3 THROUGH 42 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.6079 8.2431 9.5849 REMARK 3 T TENSOR REMARK 3 T11: 0.8338 T22: 0.7511 REMARK 3 T33: 0.5972 T12: 0.0178 REMARK 3 T13: -0.0028 T23: 0.0867 REMARK 3 L TENSOR REMARK 3 L11: 1.6599 L22: 3.8786 REMARK 3 L33: 4.1265 L12: -0.6953 REMARK 3 L13: -1.1410 L23: 2.6497 REMARK 3 S TENSOR REMARK 3 S11: 0.2617 S12: 0.4075 S13: 0.3224 REMARK 3 S21: -0.6328 S22: -0.0611 S23: 0.3545 REMARK 3 S31: -0.4514 S32: -0.9281 S33: -0.1759 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 43 THROUGH 82 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.2627 12.7857 14.5816 REMARK 3 T TENSOR REMARK 3 T11: 0.9198 T22: 0.7189 REMARK 3 T33: 0.6101 T12: 0.0574 REMARK 3 T13: 0.1219 T23: 0.0841 REMARK 3 L TENSOR REMARK 3 L11: 4.3216 L22: 3.9387 REMARK 3 L33: 4.6800 L12: 0.0704 REMARK 3 L13: 0.6507 L23: 0.7971 REMARK 3 S TENSOR REMARK 3 S11: 0.2018 S12: 0.1815 S13: 0.4016 REMARK 3 S21: 0.0207 S22: 0.0403 S23: 0.2217 REMARK 3 S31: -0.6162 S32: -0.8580 S33: -0.2733 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 83 THROUGH 182 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.7914 -2.4011 -4.3068 REMARK 3 T TENSOR REMARK 3 T11: 1.0631 T22: 0.8360 REMARK 3 T33: 0.5671 T12: -0.1569 REMARK 3 T13: -0.0834 T23: 0.0134 REMARK 3 L TENSOR REMARK 3 L11: 4.0759 L22: 2.2347 REMARK 3 L33: 1.9074 L12: -0.8340 REMARK 3 L13: -0.4359 L23: -0.4932 REMARK 3 S TENSOR REMARK 3 S11: 0.1470 S12: -0.0390 S13: -0.0727 REMARK 3 S21: -0.6241 S22: -0.0014 S23: 0.3250 REMARK 3 S31: 0.3454 S32: -0.4794 S33: -0.1102 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 183 THROUGH 202 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.7119 1.1167 10.1257 REMARK 3 T TENSOR REMARK 3 T11: 0.9351 T22: 0.8876 REMARK 3 T33: 0.5727 T12: -0.0856 REMARK 3 T13: -0.0007 T23: -0.0112 REMARK 3 L TENSOR REMARK 3 L11: 7.7835 L22: 3.1107 REMARK 3 L33: 4.4890 L12: 2.2426 REMARK 3 L13: -0.8179 L23: -1.2764 REMARK 3 S TENSOR REMARK 3 S11: 0.0259 S12: -0.7348 S13: 0.4564 REMARK 3 S21: -0.1956 S22: -0.1671 S23: -0.0607 REMARK 3 S31: -0.4727 S32: 0.6614 S33: 0.1690 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 203 THROUGH 242 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.0442 -11.0644 5.9554 REMARK 3 T TENSOR REMARK 3 T11: 1.1816 T22: 0.7248 REMARK 3 T33: 0.6013 T12: -0.0105 REMARK 3 T13: 0.0900 T23: -0.0977 REMARK 3 L TENSOR REMARK 3 L11: 5.4434 L22: 2.2487 REMARK 3 L33: 1.4774 L12: 1.5826 REMARK 3 L13: -1.7547 L23: -1.0497 REMARK 3 S TENSOR REMARK 3 S11: 0.1494 S12: 0.1019 S13: 0.2786 REMARK 3 S21: 0.1040 S22: -0.1605 S23: -0.0202 REMARK 3 S31: 0.6833 S32: 0.0608 S33: -0.0387 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 243 THROUGH 339 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.6172 -9.1334 33.2497 REMARK 3 T TENSOR REMARK 3 T11: 0.7693 T22: 0.6802 REMARK 3 T33: 0.5807 T12: -0.2590 REMARK 3 T13: 0.0987 T23: 0.0146 REMARK 3 L TENSOR REMARK 3 L11: 2.5868 L22: 3.9940 REMARK 3 L33: 5.5314 L12: -0.3476 REMARK 3 L13: 0.7322 L23: -0.0105 REMARK 3 S TENSOR REMARK 3 S11: -0.1007 S12: -0.0767 S13: -0.1537 REMARK 3 S21: -0.3092 S22: 0.0024 S23: 0.0930 REMARK 3 S31: 0.7763 S32: -0.5410 S33: 0.1179 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: (CHAIN 'V' AND (RESID 18 THROUGH 34 )) OR (CHAIN 'W' REMARK 3 AND RESID 37) REMARK 3 ORIGIN FOR THE GROUP (A): 14.0687 8.7621 57.5431 REMARK 3 T TENSOR REMARK 3 T11: 0.4934 T22: 0.5931 REMARK 3 T33: 0.6164 T12: 0.0525 REMARK 3 T13: 0.1076 T23: -0.0696 REMARK 3 L TENSOR REMARK 3 L11: 3.8435 L22: 3.4428 REMARK 3 L33: 3.5934 L12: 1.1647 REMARK 3 L13: 0.5923 L23: -2.6321 REMARK 3 S TENSOR REMARK 3 S11: -0.0993 S12: -0.6720 S13: -0.4313 REMARK 3 S21: 0.3438 S22: -0.1282 S23: 0.0109 REMARK 3 S31: 0.0732 S32: -0.1042 S33: 0.1754 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'W' AND (RESID 38 THROUGH 54 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.7088 2.3197 62.6865 REMARK 3 T TENSOR REMARK 3 T11: 0.5233 T22: 0.7191 REMARK 3 T33: 0.4775 T12: -0.0807 REMARK 3 T13: 0.0653 T23: -0.0285 REMARK 3 L TENSOR REMARK 3 L11: 2.6898 L22: 4.9740 REMARK 3 L33: 2.3608 L12: 1.9196 REMARK 3 L13: 0.1403 L23: -1.4375 REMARK 3 S TENSOR REMARK 3 S11: -0.0479 S12: -0.3782 S13: -0.4830 REMARK 3 S21: 0.0448 S22: 0.0208 S23: -0.4324 REMARK 3 S31: 0.5099 S32: -0.5797 S33: -0.0169 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 18 THROUGH 27 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.9478 -3.6092 20.9461 REMARK 3 T TENSOR REMARK 3 T11: 0.8769 T22: 0.5479 REMARK 3 T33: 0.6833 T12: -0.1262 REMARK 3 T13: 0.0941 T23: 0.1112 REMARK 3 L TENSOR REMARK 3 L11: 5.3195 L22: 5.3356 REMARK 3 L33: 6.4108 L12: -5.2590 REMARK 3 L13: -0.2722 L23: 0.8067 REMARK 3 S TENSOR REMARK 3 S11: 0.2610 S12: 0.0059 S13: -0.1749 REMARK 3 S21: -0.3443 S22: -0.4928 S23: -0.3829 REMARK 3 S31: 0.4294 S32: 0.0942 S33: 0.1873 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: (CHAIN 'C' AND (RESID 28 THROUGH 34 )) OR (CHAIN 'D' REMARK 3 AND (RESID 39 THROUGH 40)) REMARK 3 ORIGIN FOR THE GROUP (A): 6.6236 -28.2841 30.7395 REMARK 3 T TENSOR REMARK 3 T11: 1.1277 T22: 0.7403 REMARK 3 T33: 0.6557 T12: 0.0372 REMARK 3 T13: -0.1597 T23: 0.0415 REMARK 3 L TENSOR REMARK 3 L11: 7.9894 L22: 7.6398 REMARK 3 L33: 4.3320 L12: -4.3044 REMARK 3 L13: -1.1041 L23: -3.2210 REMARK 3 S TENSOR REMARK 3 S11: 0.1925 S12: 0.6810 S13: -0.2761 REMARK 3 S21: 0.5482 S22: -0.7858 S23: -0.2185 REMARK 3 S31: -0.8749 S32: 0.3151 S33: 0.5787 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 41 THROUGH 54 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.6352 -16.8604 22.9996 REMARK 3 T TENSOR REMARK 3 T11: 0.9584 T22: 0.6475 REMARK 3 T33: 0.6927 T12: 0.0947 REMARK 3 T13: 0.0590 T23: 0.0357 REMARK 3 L TENSOR REMARK 3 L11: 1.0982 L22: 8.9836 REMARK 3 L33: 2.5023 L12: -3.0332 REMARK 3 L13: 1.5808 L23: -4.5144 REMARK 3 S TENSOR REMARK 3 S11: 0.3961 S12: 0.3769 S13: -0.3318 REMARK 3 S21: 0.0940 S22: -0.4325 S23: 0.8245 REMARK 3 S31: -0.1564 S32: 0.5595 S33: 0.0126 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4R8U COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 04-SEP-14. REMARK 100 THE DEPOSITION ID IS D_1000087044. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-AUG-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.7 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : D*TREK REMARK 200 DATA SCALING SOFTWARE : D*TREK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 93883 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 48.329 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.33 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.54 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.83 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 18% MPD, 0.1M CITRATE, PH 4.4, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 298KK REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 28.60500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, V, W REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 65 CG CD CE NZ REMARK 470 LYS A 206 CG CD CE NZ REMARK 470 ASP A 341 CG OD1 OD2 REMARK 470 ARG B 36 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 65 CG CD CE NZ REMARK 470 LYS B 206 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O VAL A 235 O HOH A 507 2.01 REMARK 500 NE ARG A 325 O HOH A 512 2.08 REMARK 500 OP1 DG C 21 O HOH C 111 2.09 REMARK 500 O HOH C 103 O HOH C 106 2.10 REMARK 500 O HOH A 518 O HOH A 532 2.11 REMARK 500 O ALA A 57 O HOH A 528 2.12 REMARK 500 O HOH W 102 O HOH W 105 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O PRO B 159 NH2 ARG B 221 2555 2.14 REMARK 500 O PRO A 159 NH2 ARG A 221 2656 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DG V 22 O3' DG V 22 C3' -0.040 REMARK 500 DG W 49 O3' DG W 49 C3' -0.042 REMARK 500 DA D 48 O3' DA D 48 C3' -0.036 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DG V 21 O4' - C1' - N9 ANGL. DEV. = 1.8 DEGREES REMARK 500 DA V 28 O4' - C1' - N9 ANGL. DEV. = 2.6 DEGREES REMARK 500 DT W 39 O4' - C1' - N1 ANGL. DEV. = 2.1 DEGREES REMARK 500 DG W 41 O4' - C1' - N9 ANGL. DEV. = 3.6 DEGREES REMARK 500 DT D 39 O4' - C1' - N1 ANGL. DEV. = 1.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 12 51.69 35.43 REMARK 500 SER A 102 -178.20 179.37 REMARK 500 LYS A 279 78.03 -152.62 REMARK 500 CYS B 12 56.46 34.39 REMARK 500 ALA B 57 -8.60 78.37 REMARK 500 SER B 102 -173.49 174.50 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 401 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 9 OD1 REMARK 620 2 MET A 10 O 94.0 REMARK 620 3 ASP A 104 OD2 78.3 113.0 REMARK 620 4 ASP A 104 OD1 68.1 70.0 45.2 REMARK 620 5 1FZ A 402 O2B 174.7 91.0 101.4 115.5 REMARK 620 6 1FZ A 402 O1A 94.0 171.7 66.6 111.2 81.1 REMARK 620 7 1FZ A 402 O1G 101.7 101.2 145.8 165.2 75.5 79.3 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 402 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 9 OD1 REMARK 620 2 MET B 10 O 90.2 REMARK 620 3 ASP B 104 OD2 79.1 97.9 REMARK 620 4 1FZ B 401 O1A 101.5 168.2 85.9 REMARK 620 5 1FZ B 401 O1G 96.5 98.0 163.5 79.4 REMARK 620 6 1FZ B 401 O2B 175.5 86.2 104.1 82.1 81.4 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1FZ A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1FZ B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 402 DBREF 4R8U A 3 341 UNP Q47155 DPO4_ECOLI 2 340 DBREF 4R8U B 3 339 UNP Q47155 DPO4_ECOLI 2 338 DBREF 4R8U V 18 34 PDB 4R8U 4R8U 18 34 DBREF 4R8U C 18 34 PDB 4R8U 4R8U 18 34 DBREF 4R8U W 37 54 PDB 4R8U 4R8U 37 54 DBREF 4R8U D 39 54 PDB 4R8U 4R8U 39 54 SEQADV 4R8U SER A 2 UNP Q47155 EXPRESSION TAG SEQADV 4R8U ASP B 340 UNP Q47155 EXPRESSION TAG SEQRES 1 A 340 SER ARG LYS ILE ILE HIS VAL ASP MET ASP CYS PHE PHE SEQRES 2 A 340 ALA ALA VAL GLU MET ARG ASP ASN PRO ALA LEU ARG ASP SEQRES 3 A 340 ILE PRO ILE ALA ILE GLY GLY SER ARG GLU ARG ARG GLY SEQRES 4 A 340 VAL ILE SER THR ALA ASN TYR PRO ALA ARG LYS PHE GLY SEQRES 5 A 340 VAL ARG SER ALA MET PRO THR GLY MET ALA LEU LYS LEU SEQRES 6 A 340 CYS PRO HIS LEU THR LEU LEU PRO GLY ARG PHE ASP ALA SEQRES 7 A 340 TYR LYS GLU ALA SER ASN HIS ILE ARG GLU ILE PHE SER SEQRES 8 A 340 ARG TYR THR SER ARG ILE GLU PRO LEU SER LEU ASP GLU SEQRES 9 A 340 ALA TYR LEU ASP VAL THR ASP SER VAL HIS CYS HIS GLY SEQRES 10 A 340 SER ALA THR LEU ILE ALA GLN GLU ILE ARG GLN THR ILE SEQRES 11 A 340 PHE ASN GLU LEU GLN LEU THR ALA SER ALA GLY VAL ALA SEQRES 12 A 340 PRO VAL LYS PHE LEU ALA LYS ILE ALA SER ASP MET ASN SEQRES 13 A 340 LYS PRO ASN GLY GLN PHE VAL ILE THR PRO ALA GLU VAL SEQRES 14 A 340 PRO ALA PHE LEU GLN THR LEU PRO LEU ALA LYS ILE PRO SEQRES 15 A 340 GLY VAL GLY LYS VAL SER ALA ALA LYS LEU GLU ALA MET SEQRES 16 A 340 GLY LEU ARG THR CYS GLY ASP VAL GLN LYS CYS ASP LEU SEQRES 17 A 340 VAL MET LEU LEU LYS ARG PHE GLY LYS PHE GLY ARG ILE SEQRES 18 A 340 LEU TRP GLU ARG SER GLN GLY ILE ASP GLU ARG ASP VAL SEQRES 19 A 340 ASN SER GLU ARG LEU ARG LYS SER VAL GLY VAL GLU ARG SEQRES 20 A 340 THR MET ALA GLU ASP ILE HIS HIS TRP SER GLU CYS GLU SEQRES 21 A 340 ALA ILE ILE GLU ARG LEU TYR PRO GLU LEU GLU ARG ARG SEQRES 22 A 340 LEU ALA LYS VAL LYS PRO ASP LEU LEU ILE ALA ARG GLN SEQRES 23 A 340 GLY VAL LYS LEU LYS PHE ASP ASP PHE GLN GLN THR THR SEQRES 24 A 340 GLN GLU HIS VAL TRP PRO ARG LEU ASN LYS ALA ASP LEU SEQRES 25 A 340 ILE ALA THR ALA ARG LYS THR TRP ASP GLU ARG ARG GLY SEQRES 26 A 340 GLY ARG GLY VAL ARG LEU VAL GLY LEU HIS VAL THR LEU SEQRES 27 A 340 LEU ASP SEQRES 1 B 338 ARG LYS ILE ILE HIS VAL ASP MET ASP CYS PHE PHE ALA SEQRES 2 B 338 ALA VAL GLU MET ARG ASP ASN PRO ALA LEU ARG ASP ILE SEQRES 3 B 338 PRO ILE ALA ILE GLY GLY SER ARG GLU ARG ARG GLY VAL SEQRES 4 B 338 ILE SER THR ALA ASN TYR PRO ALA ARG LYS PHE GLY VAL SEQRES 5 B 338 ARG SER ALA MET PRO THR GLY MET ALA LEU LYS LEU CYS SEQRES 6 B 338 PRO HIS LEU THR LEU LEU PRO GLY ARG PHE ASP ALA TYR SEQRES 7 B 338 LYS GLU ALA SER ASN HIS ILE ARG GLU ILE PHE SER ARG SEQRES 8 B 338 TYR THR SER ARG ILE GLU PRO LEU SER LEU ASP GLU ALA SEQRES 9 B 338 TYR LEU ASP VAL THR ASP SER VAL HIS CYS HIS GLY SER SEQRES 10 B 338 ALA THR LEU ILE ALA GLN GLU ILE ARG GLN THR ILE PHE SEQRES 11 B 338 ASN GLU LEU GLN LEU THR ALA SER ALA GLY VAL ALA PRO SEQRES 12 B 338 VAL LYS PHE LEU ALA LYS ILE ALA SER ASP MET ASN LYS SEQRES 13 B 338 PRO ASN GLY GLN PHE VAL ILE THR PRO ALA GLU VAL PRO SEQRES 14 B 338 ALA PHE LEU GLN THR LEU PRO LEU ALA LYS ILE PRO GLY SEQRES 15 B 338 VAL GLY LYS VAL SER ALA ALA LYS LEU GLU ALA MET GLY SEQRES 16 B 338 LEU ARG THR CYS GLY ASP VAL GLN LYS CYS ASP LEU VAL SEQRES 17 B 338 MET LEU LEU LYS ARG PHE GLY LYS PHE GLY ARG ILE LEU SEQRES 18 B 338 TRP GLU ARG SER GLN GLY ILE ASP GLU ARG ASP VAL ASN SEQRES 19 B 338 SER GLU ARG LEU ARG LYS SER VAL GLY VAL GLU ARG THR SEQRES 20 B 338 MET ALA GLU ASP ILE HIS HIS TRP SER GLU CYS GLU ALA SEQRES 21 B 338 ILE ILE GLU ARG LEU TYR PRO GLU LEU GLU ARG ARG LEU SEQRES 22 B 338 ALA LYS VAL LYS PRO ASP LEU LEU ILE ALA ARG GLN GLY SEQRES 23 B 338 VAL LYS LEU LYS PHE ASP ASP PHE GLN GLN THR THR GLN SEQRES 24 B 338 GLU HIS VAL TRP PRO ARG LEU ASN LYS ALA ASP LEU ILE SEQRES 25 B 338 ALA THR ALA ARG LYS THR TRP ASP GLU ARG ARG GLY GLY SEQRES 26 B 338 ARG GLY VAL ARG LEU VAL GLY LEU HIS VAL THR LEU ASP SEQRES 1 V 17 DC DT DA DG DG DG DT DC DC DT DA DG DG SEQRES 2 V 17 DA DC DC DC SEQRES 1 W 18 DT DC DT DA DG DG DG DT DC DC DT DA DG SEQRES 2 W 18 DG DA DC DC DC SEQRES 1 C 17 DC DT DA DG DG DG DT DC DC DT DA DG DG SEQRES 2 C 17 DA DC DC DC SEQRES 1 D 16 DT DA DG DG DG DT DC DC DT DA DG DG DA SEQRES 2 D 16 DC DC DC HET MG A 401 1 HET 1FZ A 402 29 HET 1FZ B 401 29 HET MG B 402 1 HETNAM MG MAGNESIUM ION HETNAM 1FZ 5'-O-[(R)-HYDROXY{[(R)-HYDROXY(PHOSPHONOOXY) HETNAM 2 1FZ PHOSPHORYL]AMINO}PHOSPHORYL]THYMIDINE FORMUL 7 MG 2(MG 2+) FORMUL 8 1FZ 2(C10 H18 N3 O13 P3) FORMUL 11 HOH *63(H2 O) HELIX 1 1 CYS A 12 ASN A 22 1 11 HELIX 2 2 PRO A 23 ARG A 26 5 4 HELIX 3 3 ASN A 46 LYS A 51 1 6 HELIX 4 4 PRO A 59 CYS A 67 1 9 HELIX 5 5 ARG A 76 ARG A 93 1 18 HELIX 6 6 HIS A 115 GLY A 118 5 4 HELIX 7 7 SER A 119 GLN A 136 1 18 HELIX 8 8 VAL A 146 ASN A 157 1 12 HELIX 9 9 THR A 166 ALA A 168 5 3 HELIX 10 10 GLU A 169 THR A 176 1 8 HELIX 11 11 PRO A 178 ILE A 182 5 5 HELIX 12 12 GLY A 186 ALA A 195 1 10 HELIX 13 13 THR A 200 LYS A 206 1 7 HELIX 14 14 ASP A 208 GLY A 217 1 10 HELIX 15 15 GLY A 217 GLN A 228 1 12 HELIX 16 16 HIS A 256 LYS A 279 1 24 HELIX 17 17 ASN A 309 ARG A 325 1 17 HELIX 18 18 CYS B 12 ASN B 22 1 11 HELIX 19 19 PRO B 23 ARG B 26 5 4 HELIX 20 20 SER B 35 ARG B 39 5 5 HELIX 21 21 ASN B 46 LYS B 51 1 6 HELIX 22 22 PRO B 59 CYS B 67 1 9 HELIX 23 23 ARG B 76 THR B 95 1 20 HELIX 24 24 VAL B 114 GLY B 118 5 5 HELIX 25 25 SER B 119 GLN B 136 1 18 HELIX 26 26 VAL B 146 ASP B 155 1 10 HELIX 27 27 THR B 166 ALA B 168 5 3 HELIX 28 28 GLU B 169 THR B 176 1 8 HELIX 29 29 PRO B 178 ILE B 182 5 5 HELIX 30 30 GLY B 186 ALA B 195 1 10 HELIX 31 31 THR B 200 LYS B 206 1 7 HELIX 32 32 ASP B 208 GLY B 217 1 10 HELIX 33 33 GLY B 217 GLN B 228 1 12 HELIX 34 34 HIS B 256 LYS B 277 1 22 HELIX 35 35 ASN B 309 ARG B 325 1 17 SHEET 1 A 5 ILE A 98 SER A 102 0 SHEET 2 A 5 GLU A 105 ASP A 109 -1 O TYR A 107 N GLU A 99 SHEET 3 A 5 ILE A 5 MET A 10 -1 N ILE A 6 O LEU A 108 SHEET 4 A 5 ALA A 139 ALA A 144 -1 O SER A 140 N ASP A 9 SHEET 5 A 5 GLN A 162 VAL A 164 1 O PHE A 163 N VAL A 143 SHEET 1 B 3 ILE A 42 ALA A 45 0 SHEET 2 B 3 ILE A 30 GLY A 33 -1 N ILE A 32 O SER A 43 SHEET 3 B 3 THR A 71 LEU A 73 1 O LEU A 73 N ALA A 31 SHEET 1 C 4 SER A 243 ILE A 254 0 SHEET 2 C 4 VAL A 330 THR A 338 -1 O LEU A 335 N VAL A 246 SHEET 3 C 4 ARG A 286 PHE A 293 -1 N LYS A 292 O ARG A 331 SHEET 4 C 4 GLN A 298 VAL A 304 -1 O GLN A 301 N VAL A 289 SHEET 1 D 5 ILE B 98 SER B 102 0 SHEET 2 D 5 GLU B 105 ASP B 109 -1 O GLU B 105 N LEU B 101 SHEET 3 D 5 ILE B 5 MET B 10 -1 N ILE B 6 O LEU B 108 SHEET 4 D 5 ALA B 139 ALA B 144 -1 O SER B 140 N ASP B 9 SHEET 5 D 5 GLN B 162 VAL B 164 1 O PHE B 163 N VAL B 143 SHEET 1 E 3 ILE B 42 ALA B 45 0 SHEET 2 E 3 ILE B 30 GLY B 33 -1 N ILE B 32 O SER B 43 SHEET 3 E 3 THR B 71 LEU B 73 1 O LEU B 73 N ALA B 31 SHEET 1 F 4 SER B 243 ILE B 254 0 SHEET 2 F 4 VAL B 330 THR B 338 -1 O LEU B 335 N VAL B 246 SHEET 3 F 4 ARG B 286 PHE B 293 -1 N LYS B 290 O GLY B 334 SHEET 4 F 4 GLN B 298 VAL B 304 -1 O THR B 299 N LEU B 291 LINK OD1 ASP A 9 MG MG A 401 1555 1555 2.33 LINK O MET A 10 MG MG A 401 1555 1555 2.24 LINK OD2 ASP A 104 MG MG A 401 1555 1555 2.42 LINK OD1 ASP A 104 MG MG A 401 1555 1555 2.99 LINK MG MG A 401 O2B 1FZ A 402 1555 1555 2.15 LINK MG MG A 401 O1A 1FZ A 402 1555 1555 2.32 LINK MG MG A 401 O1G 1FZ A 402 1555 1555 2.44 LINK OD1 ASP B 9 MG MG B 402 1555 1555 2.26 LINK O MET B 10 MG MG B 402 1555 1555 2.33 LINK OD2 ASP B 104 MG MG B 402 1555 1555 2.38 LINK O1A 1FZ B 401 MG MG B 402 1555 1555 1.99 LINK O1G 1FZ B 401 MG MG B 402 1555 1555 2.25 LINK O2B 1FZ B 401 MG MG B 402 1555 1555 2.27 CISPEP 1 LYS A 158 PRO A 159 0 -0.96 CISPEP 2 LYS B 158 PRO B 159 0 0.64 SITE 1 AC1 4 ASP A 9 MET A 10 ASP A 104 1FZ A 402 SITE 1 AC2 17 ASP A 9 MET A 10 ASP A 11 CYS A 12 SITE 2 AC2 17 PHE A 13 PHE A 14 SER A 43 THR A 44 SITE 3 AC2 17 ARG A 50 SER A 56 ASP A 104 GLU A 105 SITE 4 AC2 17 LYS A 158 MG A 401 HOH A 514 DA V 20 SITE 5 AC2 17 DC W 54 SITE 1 AC3 15 ASP B 9 MET B 10 ASP B 11 CYS B 12 SITE 2 AC3 15 PHE B 13 PHE B 14 SER B 43 THR B 44 SITE 3 AC3 15 ARG B 50 SER B 56 ASP B 104 LYS B 158 SITE 4 AC3 15 MG B 402 DA C 20 DC D 54 SITE 1 AC4 4 ASP B 9 MET B 10 ASP B 104 1FZ B 401 CRYST1 86.950 57.210 110.600 90.00 94.69 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011501 0.000000 0.000943 0.00000 SCALE2 0.000000 0.017479 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009072 0.00000