PDB Short entry for 4TVZ HEADER PROTEIN BINDING 29-JUN-14 4TVZ TITLE CRYSTAL STRUCTURE OF SCARB2 IN NEURAL CONDITION (PH7.5) COMPND MOL_ID: 1; COMPND 2 MOLECULE: SCAVENGER RECEPTOR CLASS B MEMBER 2; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: ECTODOMAIN, UNP RESIDUE 37-430; COMPND 5 SYNONYM: LYSOSOME MEMBRANE PROTEIN 2, 85 KDA LYSOSOMAL MEMBRANE COMPND 6 SIALOGLYCOPROTEIN, LGP85, CD36 ANTIGEN-LIKE 2, LYSOSOME MEMBRANE COMPND 7 PROTEIN II, LIMP II; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SCARB2, CD36L2, LIMP2, LIMPII; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 9 EXPRESSION_SYSTEM_CELL_LINE: HEK 293T; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PHL_SEC KEYWDS LIPID BINDING TUNNEL, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR M.H.DANG,X.X.WANG,Z.H.RAO REVDAT 4 08-NOV-23 4TVZ 1 REMARK HETSYN LINK ATOM REVDAT 3 29-JUL-20 4TVZ 1 COMPND REMARK HETNAM LINK REVDAT 3 2 1 SITE ATOM REVDAT 2 29-JAN-20 4TVZ 1 SOURCE REMARK REVDAT 1 08-JUL-15 4TVZ 0 JRNL AUTH M.DANG,X.WANG,Q.WANG,Y.WANG,J.LIN,Y.SUN,X.LI,L.ZHANG,Z.LOU, JRNL AUTH 2 J.WANG,Z.RAO JRNL TITL MOLECULAR MECHANISM OF SCARB2-MEDIATED ATTACHMENT AND JRNL TITL 2 UNCOATING OF EV71 JRNL REF PROTEIN CELL V. 5 692 2014 JRNL REFN ESSN 1674-8018 JRNL PMID 24986489 JRNL DOI 10.1007/S13238-014-0087-3 REMARK 2 REMARK 2 RESOLUTION. 3.01 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.9_1692) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.01 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.88 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 69.6 REMARK 3 NUMBER OF REFLECTIONS : 18190 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.262 REMARK 3 R VALUE (WORKING SET) : 0.259 REMARK 3 FREE R VALUE : 0.304 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.910 REMARK 3 FREE R VALUE TEST SET COUNT : 894 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 34.8854 - 5.4557 0.96 4095 200 0.2448 0.2397 REMARK 3 2 5.4557 - 4.3330 0.91 3787 188 0.2285 0.3224 REMARK 3 3 4.3330 - 3.7860 0.91 3739 195 0.2689 0.3133 REMARK 3 4 3.7860 - 3.4402 0.71 2967 150 0.2829 0.3113 REMARK 3 5 3.4402 - 3.1938 0.47 1913 116 0.2911 0.3783 REMARK 3 6 3.1938 - 3.0056 0.19 795 45 0.3364 0.3360 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.340 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.890 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 32.02 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 39.88 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 7173 REMARK 3 ANGLE : 1.604 9862 REMARK 3 CHIRALITY : 0.057 1244 REMARK 3 PLANARITY : 0.004 1181 REMARK 3 DIHEDRAL : 16.375 2681 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN A REMARK 3 SELECTION : CHAIN B REMARK 3 ATOM PAIRS NUMBER : 3589 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4TVZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 25-AUG-14. REMARK 100 THE DEPOSITION ID IS D_1000202376. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-JUN-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-5A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX225HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : SCALEPACK REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24297 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.7 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : 0.13100 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 5.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.11 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.8 REMARK 200 DATA REDUNDANCY IN SHELL : 3.40 REMARK 200 R MERGE FOR SHELL (I) : 0.63700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4F7B REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 66.25 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.64 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 MOL/L HEPES, 25%(W/V) PEG 3350, PH REMARK 280 7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 47.48000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 31.86150 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 47.48000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 31.86150 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: BIOLOGICAL UNIT IS THE SAME AS ASYM. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, D, E, F, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, H, I, J, K, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ILE A 37 CG1 CG2 CD1 REMARK 470 LYS A 39 CG CD CE NZ REMARK 470 LYS A 40 CG CD CE NZ REMARK 470 GLU A 48 CG CD OE1 OE2 REMARK 470 LYS A 55 CG CD CE NZ REMARK 470 GLN A 101 CG CD OE1 NE2 REMARK 470 LYS A 234 CG CD CE NZ REMARK 470 LYS A 262 CG CD CE NZ REMARK 470 ASP A 307 CG OD1 OD2 REMARK 470 ASN A 317 CG OD1 ND2 REMARK 470 VAL A 326 CG1 CG2 REMARK 470 SER A 427 OG REMARK 470 MET A 428 CG SD CE REMARK 470 ILE B 37 CG1 CG2 CD1 REMARK 470 LYS B 40 CG CD CE NZ REMARK 470 GLU B 48 CG CD OE1 OE2 REMARK 470 LYS B 55 CG CD CE NZ REMARK 470 GLN B 101 CG CD OE1 NE2 REMARK 470 LYS B 234 CG CD CE NZ REMARK 470 LYS B 244 CG CD CE NZ REMARK 470 LYS B 262 CG CD CE NZ REMARK 470 SER B 306 OG REMARK 470 ASP B 307 CG OD1 OD2 REMARK 470 ASN B 317 CG OD1 ND2 REMARK 470 VAL B 326 CG1 CG2 REMARK 470 GLU B 347 CG CD OE1 OE2 REMARK 470 ARG B 424 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 426 CG CD CE NZ REMARK 470 SER B 427 OG REMARK 470 MET B 428 CG SD CE REMARK 470 ILE B 429 CG1 CG2 CD1 REMARK 470 ASN B 430 CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 SG CYS B 312 CB CYS B 318 1.67 REMARK 500 SG CYS A 312 CB CYS A 318 1.76 REMARK 500 OE1 GLU B 85 OH TYR B 410 2.15 REMARK 500 CB CYS B 274 SG CYS B 329 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 347 CD GLU A 347 OE2 0.077 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLN B 164 N - CA - C ANGL. DEV. = 16.4 DEGREES REMARK 500 LEU B 319 CA - CB - CG ANGL. DEV. = 13.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 105 -87.89 -101.67 REMARK 500 ALA A 111 -178.26 -170.24 REMARK 500 ILE A 155 -15.23 84.61 REMARK 500 CYS A 274 -0.66 76.35 REMARK 500 GLN A 288 -127.56 58.50 REMARK 500 ASN A 331 33.91 34.51 REMARK 500 ASP B 104 -119.18 39.09 REMARK 500 ALA B 111 -179.04 -171.60 REMARK 500 ILE B 155 -15.30 84.94 REMARK 500 GLN B 164 -14.52 71.24 REMARK 500 GLN B 288 -126.24 57.29 REMARK 500 ASN B 331 35.08 35.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 TYR B 163 GLN B 164 122.74 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4TW0 RELATED DB: PDB REMARK 900 RELATED ID: 4TW2 RELATED DB: PDB DBREF 4TVZ A 37 430 UNP Q14108 SCRB2_HUMAN 37 430 DBREF 4TVZ B 37 430 UNP Q14108 SCRB2_HUMAN 37 430 SEQRES 1 A 394 ILE GLU LYS LYS ILE VAL LEU ARG ASN GLY THR GLU ALA SEQRES 2 A 394 PHE ASP SER TRP GLU LYS PRO PRO LEU PRO VAL TYR THR SEQRES 3 A 394 GLN PHE TYR PHE PHE ASN VAL THR ASN PRO GLU GLU ILE SEQRES 4 A 394 LEU ARG GLY GLU THR PRO ARG VAL GLU GLU VAL GLY PRO SEQRES 5 A 394 TYR THR TYR ARG GLU LEU ARG ASN LYS ALA ASN ILE GLN SEQRES 6 A 394 PHE GLY ASP ASN GLY THR THR ILE SER ALA VAL SER ASN SEQRES 7 A 394 LYS ALA TYR VAL PHE GLU ARG ASP GLN SER VAL GLY ASP SEQRES 8 A 394 PRO LYS ILE ASP LEU ILE ARG THR LEU ASN ILE PRO VAL SEQRES 9 A 394 LEU THR VAL ILE GLU TRP SER GLN VAL HIS PHE LEU ARG SEQRES 10 A 394 GLU ILE ILE GLU ALA MET LEU LYS ALA TYR GLN GLN LYS SEQRES 11 A 394 LEU PHE VAL THR HIS THR VAL ASP GLU LEU LEU TRP GLY SEQRES 12 A 394 TYR LYS ASP GLU ILE LEU SER LEU ILE HIS VAL PHE ARG SEQRES 13 A 394 PRO ASP ILE SER PRO TYR PHE GLY LEU PHE TYR GLU LYS SEQRES 14 A 394 ASN GLY THR ASN ASP GLY ASP TYR VAL PHE LEU THR GLY SEQRES 15 A 394 GLU ASP SER TYR LEU ASN PHE THR LYS ILE VAL GLU TRP SEQRES 16 A 394 ASN GLY LYS THR SER LEU ASP TRP TRP ILE THR ASP LYS SEQRES 17 A 394 CYS ASN MET ILE ASN GLY THR ASP GLY ASP SER PHE HIS SEQRES 18 A 394 PRO LEU ILE THR LYS ASP GLU VAL LEU TYR VAL PHE PRO SEQRES 19 A 394 SER ASP PHE CYS ARG SER VAL TYR ILE THR PHE SER ASP SEQRES 20 A 394 TYR GLU SER VAL GLN GLY LEU PRO ALA PHE ARG TYR LYS SEQRES 21 A 394 VAL PRO ALA GLU ILE LEU ALA ASN THR SER ASP ASN ALA SEQRES 22 A 394 GLY PHE CYS ILE PRO GLU GLY ASN CYS LEU GLY SER GLY SEQRES 23 A 394 VAL LEU ASN VAL SER ILE CYS LYS ASN GLY ALA PRO ILE SEQRES 24 A 394 ILE MET SER PHE PRO HIS PHE TYR GLN ALA ASP GLU ARG SEQRES 25 A 394 PHE VAL SER ALA ILE GLU GLY MET HIS PRO ASN GLN GLU SEQRES 26 A 394 ASP HIS GLU THR PHE VAL ASP ILE ASN PRO LEU THR GLY SEQRES 27 A 394 ILE ILE LEU LYS ALA ALA LYS ARG PHE GLN ILE ASN ILE SEQRES 28 A 394 TYR VAL LYS LYS LEU ASP ASP PHE VAL GLU THR GLY ASP SEQRES 29 A 394 ILE ARG THR MET VAL PHE PRO VAL MET TYR LEU ASN GLU SEQRES 30 A 394 SER VAL HIS ILE ASP LYS GLU THR ALA SER ARG LEU LYS SEQRES 31 A 394 SER MET ILE ASN SEQRES 1 B 394 ILE GLU LYS LYS ILE VAL LEU ARG ASN GLY THR GLU ALA SEQRES 2 B 394 PHE ASP SER TRP GLU LYS PRO PRO LEU PRO VAL TYR THR SEQRES 3 B 394 GLN PHE TYR PHE PHE ASN VAL THR ASN PRO GLU GLU ILE SEQRES 4 B 394 LEU ARG GLY GLU THR PRO ARG VAL GLU GLU VAL GLY PRO SEQRES 5 B 394 TYR THR TYR ARG GLU LEU ARG ASN LYS ALA ASN ILE GLN SEQRES 6 B 394 PHE GLY ASP ASN GLY THR THR ILE SER ALA VAL SER ASN SEQRES 7 B 394 LYS ALA TYR VAL PHE GLU ARG ASP GLN SER VAL GLY ASP SEQRES 8 B 394 PRO LYS ILE ASP LEU ILE ARG THR LEU ASN ILE PRO VAL SEQRES 9 B 394 LEU THR VAL ILE GLU TRP SER GLN VAL HIS PHE LEU ARG SEQRES 10 B 394 GLU ILE ILE GLU ALA MET LEU LYS ALA TYR GLN GLN LYS SEQRES 11 B 394 LEU PHE VAL THR HIS THR VAL ASP GLU LEU LEU TRP GLY SEQRES 12 B 394 TYR LYS ASP GLU ILE LEU SER LEU ILE HIS VAL PHE ARG SEQRES 13 B 394 PRO ASP ILE SER PRO TYR PHE GLY LEU PHE TYR GLU LYS SEQRES 14 B 394 ASN GLY THR ASN ASP GLY ASP TYR VAL PHE LEU THR GLY SEQRES 15 B 394 GLU ASP SER TYR LEU ASN PHE THR LYS ILE VAL GLU TRP SEQRES 16 B 394 ASN GLY LYS THR SER LEU ASP TRP TRP ILE THR ASP LYS SEQRES 17 B 394 CYS ASN MET ILE ASN GLY THR ASP GLY ASP SER PHE HIS SEQRES 18 B 394 PRO LEU ILE THR LYS ASP GLU VAL LEU TYR VAL PHE PRO SEQRES 19 B 394 SER ASP PHE CYS ARG SER VAL TYR ILE THR PHE SER ASP SEQRES 20 B 394 TYR GLU SER VAL GLN GLY LEU PRO ALA PHE ARG TYR LYS SEQRES 21 B 394 VAL PRO ALA GLU ILE LEU ALA ASN THR SER ASP ASN ALA SEQRES 22 B 394 GLY PHE CYS ILE PRO GLU GLY ASN CYS LEU GLY SER GLY SEQRES 23 B 394 VAL LEU ASN VAL SER ILE CYS LYS ASN GLY ALA PRO ILE SEQRES 24 B 394 ILE MET SER PHE PRO HIS PHE TYR GLN ALA ASP GLU ARG SEQRES 25 B 394 PHE VAL SER ALA ILE GLU GLY MET HIS PRO ASN GLN GLU SEQRES 26 B 394 ASP HIS GLU THR PHE VAL ASP ILE ASN PRO LEU THR GLY SEQRES 27 B 394 ILE ILE LEU LYS ALA ALA LYS ARG PHE GLN ILE ASN ILE SEQRES 28 B 394 TYR VAL LYS LYS LEU ASP ASP PHE VAL GLU THR GLY ASP SEQRES 29 B 394 ILE ARG THR MET VAL PHE PRO VAL MET TYR LEU ASN GLU SEQRES 30 B 394 SER VAL HIS ILE ASP LYS GLU THR ALA SER ARG LEU LYS SEQRES 31 B 394 SER MET ILE ASN HET NAG C 1 14 HET NAG C 2 14 HET BMA C 3 11 HET MAN C 4 11 HET NAG D 1 14 HET NAG D 2 14 HET NAG E 1 14 HET NAG E 2 14 HET NAG F 1 14 HET NAG F 2 14 HET BMA F 3 11 HET MAN F 4 11 HET MAN F 5 11 HET MAN F 6 11 HET MAN F 7 11 HET MAN F 8 11 HET MAN F 9 11 HET NAG G 1 14 HET NAG G 2 14 HET BMA G 3 11 HET MAN G 4 11 HET MAN G 5 11 HET NAG H 1 14 HET NAG H 2 14 HET BMA H 3 11 HET NAG I 1 14 HET NAG I 2 14 HET NAG J 1 14 HET NAG J 2 14 HET NAG K 1 14 HET NAG K 2 14 HET BMA K 3 11 HET MAN K 4 11 HET MAN K 5 11 HET MAN K 6 11 HET MAN K 7 11 HET MAN K 8 11 HET MAN K 9 11 HET MAN K 10 11 HET NAG L 1 14 HET NAG L 2 14 HET BMA L 3 11 HET MAN L 4 11 HET NAG A 501 14 HET NAG A 502 14 HET NAG A 503 14 HET NAG B 501 14 HET NAG B 502 14 HET NAG B 503 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 3 NAG 26(C8 H15 N O6) FORMUL 3 BMA 6(C6 H12 O6) FORMUL 3 MAN 17(C6 H12 O6) HELIX 1 AA1 ILE A 37 ILE A 41 5 5 HELIX 2 AA2 THR A 47 LYS A 55 1 9 HELIX 3 AA3 ASN A 71 ARG A 77 1 7 HELIX 4 AA4 ASN A 137 VAL A 149 1 13 HELIX 5 AA5 GLU A 157 TYR A 163 1 7 HELIX 6 AA6 VAL A 173 GLY A 179 1 7 HELIX 7 AA7 ASP A 182 ARG A 192 1 11 HELIX 8 AA8 SER A 221 PHE A 225 5 5 HELIX 9 AA9 PRO A 270 CYS A 274 5 5 HELIX 10 AB1 ASN A 308 CYS A 312 5 5 HELIX 11 AB2 PRO A 340 TYR A 343 5 4 HELIX 12 AB3 ASP A 346 ILE A 353 1 8 HELIX 13 AB4 ASN A 359 GLU A 364 1 6 HELIX 14 AB5 PHE A 395 GLY A 399 5 5 HELIX 15 AB6 ASP A 418 SER A 427 1 10 HELIX 16 AB7 ILE B 37 ILE B 41 5 5 HELIX 17 AB8 THR B 47 LYS B 55 1 9 HELIX 18 AB9 ASN B 71 ARG B 77 1 7 HELIX 19 AC1 ARG B 121 SER B 124 5 4 HELIX 20 AC2 ASN B 137 VAL B 149 1 13 HELIX 21 AC3 GLU B 157 TYR B 163 1 7 HELIX 22 AC4 VAL B 173 GLY B 179 1 7 HELIX 23 AC5 ASP B 182 ARG B 192 1 11 HELIX 24 AC6 SER B 221 PHE B 225 5 5 HELIX 25 AC7 ASN B 308 CYS B 312 5 5 HELIX 26 AC8 PRO B 340 TYR B 343 5 4 HELIX 27 AC9 ASP B 346 ILE B 353 1 8 HELIX 28 AD1 ASN B 359 GLU B 364 1 6 HELIX 29 AD2 GLU B 420 MET B 428 1 9 SHEET 1 AA1 8 VAL A 83 VAL A 86 0 SHEET 2 AA1 8 VAL A 60 VAL A 69 -1 N ASN A 68 O GLU A 84 SHEET 3 AA1 8 MET A 404 HIS A 416 -1 O SER A 414 N TYR A 61 SHEET 4 AA1 8 ILE A 376 VAL A 389 -1 N ILE A 385 O MET A 409 SHEET 5 AA1 8 PHE A 366 ILE A 369 -1 N ASP A 368 O LYS A 378 SHEET 6 AA1 8 LEU A 290 LYS A 296 -1 N TYR A 295 O VAL A 367 SHEET 7 AA1 8 VAL A 277 VAL A 287 -1 N SER A 282 O ARG A 294 SHEET 8 AA1 8 LEU A 266 VAL A 268 -1 N VAL A 268 O VAL A 277 SHEET 1 AA2 9 LYS A 227 TRP A 231 0 SHEET 2 AA2 9 TYR A 213 LEU A 216 -1 N LEU A 216 O LYS A 227 SHEET 3 AA2 9 THR A 108 GLU A 120 -1 N ILE A 109 O PHE A 215 SHEET 4 AA2 9 THR A 90 PHE A 102 -1 N THR A 90 O GLU A 120 SHEET 5 AA2 9 VAL A 60 VAL A 69 -1 N VAL A 60 O GLU A 93 SHEET 6 AA2 9 MET A 404 HIS A 416 -1 O SER A 414 N TYR A 61 SHEET 7 AA2 9 ILE A 376 VAL A 389 -1 N ILE A 385 O MET A 409 SHEET 8 AA2 9 ILE A 335 SER A 338 -1 N ILE A 336 O ASN A 386 SHEET 9 AA2 9 VAL A 323 ASN A 325 -1 N LEU A 324 O MET A 337 SHEET 1 AA3 2 LEU A 132 LEU A 136 0 SHEET 2 AA3 2 PHE A 168 THR A 172 -1 O HIS A 171 N ILE A 133 SHEET 1 AA4 2 TYR A 180 LYS A 181 0 SHEET 2 AA4 2 TYR A 198 PHE A 199 -1 O PHE A 199 N TYR A 180 SHEET 1 AA5 8 VAL B 83 VAL B 86 0 SHEET 2 AA5 8 VAL B 60 VAL B 69 -1 N PHE B 66 O VAL B 86 SHEET 3 AA5 8 MET B 404 HIS B 416 -1 O SER B 414 N TYR B 61 SHEET 4 AA5 8 ILE B 376 VAL B 389 -1 N ILE B 385 O MET B 409 SHEET 5 AA5 8 PHE B 366 ILE B 369 -1 N ASP B 368 O LYS B 378 SHEET 6 AA5 8 LEU B 290 LYS B 296 -1 N PHE B 293 O ILE B 369 SHEET 7 AA5 8 VAL B 277 VAL B 287 -1 N SER B 282 O ARG B 294 SHEET 8 AA5 8 LEU B 266 VAL B 268 -1 N VAL B 268 O VAL B 277 SHEET 1 AA6 9 LYS B 227 TRP B 231 0 SHEET 2 AA6 9 THR B 208 LEU B 216 -1 N LEU B 216 O LYS B 227 SHEET 3 AA6 9 THR B 108 GLU B 120 -1 N ILE B 109 O PHE B 215 SHEET 4 AA6 9 THR B 90 PHE B 102 -1 N THR B 90 O GLU B 120 SHEET 5 AA6 9 VAL B 60 VAL B 69 -1 N VAL B 60 O GLU B 93 SHEET 6 AA6 9 MET B 404 HIS B 416 -1 O SER B 414 N TYR B 61 SHEET 7 AA6 9 ILE B 376 VAL B 389 -1 N ILE B 385 O MET B 409 SHEET 8 AA6 9 ILE B 335 SER B 338 -1 N ILE B 336 O ASN B 386 SHEET 9 AA6 9 VAL B 323 ASN B 325 -1 N LEU B 324 O MET B 337 SHEET 1 AA7 2 LEU B 132 LEU B 136 0 SHEET 2 AA7 2 PHE B 168 THR B 172 -1 O VAL B 169 N THR B 135 SHEET 1 AA8 2 TYR B 180 LYS B 181 0 SHEET 2 AA8 2 TYR B 198 PHE B 199 -1 O PHE B 199 N TYR B 180 SSBOND 1 CYS A 274 CYS A 329 1555 1555 2.03 SSBOND 2 CYS A 312 CYS A 318 1555 1555 2.03 SSBOND 3 CYS B 274 CYS B 329 1555 1555 2.03 SSBOND 4 CYS B 312 CYS B 318 1555 1555 2.04 LINK ND2 ASN A 45 C1 NAG A 501 1555 1555 1.45 LINK ND2 ASN A 68 C1 NAG C 1 1555 1555 1.43 LINK ND2 ASN A 206 C1 NAG D 1 1555 1555 1.44 LINK ND2 ASN A 224 C1 NAG A 502 1555 1555 1.45 LINK ND2 ASN A 249 C1 NAG E 1 1555 1555 1.43 LINK ND2 ASN A 304 C1 NAG A 503 1555 1555 1.43 LINK ND2 ASN A 325 C1 NAG F 1 1555 1555 1.43 LINK ND2 ASN A 412 C1 NAG G 1 1555 1555 1.44 LINK ND2 ASN B 45 C1 NAG B 501 1555 1555 1.45 LINK ND2 ASN B 68 C1 NAG H 1 1555 1555 1.44 LINK ND2 ASN B 206 C1 NAG I 1 1555 1555 1.44 LINK ND2 ASN B 224 C1 NAG B 502 1555 1555 1.43 LINK ND2 ASN B 249 C1 NAG J 1 1555 1555 1.43 LINK ND2 ASN B 304 C1 NAG B 503 1555 1555 1.44 LINK ND2 ASN B 325 C1 NAG K 1 1555 1555 1.43 LINK ND2 ASN B 412 C1 NAG L 1 1555 1555 1.44 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.43 LINK O4 NAG C 2 C1 BMA C 3 1555 1555 1.43 LINK O3 BMA C 3 C1 MAN C 4 1555 1555 1.43 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.44 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.44 LINK O4 NAG F 1 C1 NAG F 2 1555 1555 1.44 LINK O4 NAG F 2 C1 BMA F 3 1555 1555 1.43 LINK O6 BMA F 3 C1 MAN F 4 1555 1555 1.44 LINK O3 BMA F 3 C1 MAN F 9 1555 1555 1.43 LINK O3 MAN F 4 C1 MAN F 5 1555 1555 1.44 LINK O6 MAN F 4 C1 MAN F 7 1555 1555 1.43 LINK O2 MAN F 5 C1 MAN F 6 1555 1555 1.44 LINK O2 MAN F 7 C1 MAN F 8 1555 1555 1.44 LINK O4 NAG G 1 C1 NAG G 2 1555 1555 1.44 LINK O4 NAG G 2 C1 BMA G 3 1555 1555 1.44 LINK O3 BMA G 3 C1 MAN G 4 1555 1555 1.44 LINK O6 BMA G 3 C1 MAN G 5 1555 1555 1.44 LINK O4 NAG H 1 C1 NAG H 2 1555 1555 1.43 LINK O4 NAG H 2 C1 BMA H 3 1555 1555 1.44 LINK O4 NAG I 1 C1 NAG I 2 1555 1555 1.44 LINK O4 NAG J 1 C1 NAG J 2 1555 1555 1.44 LINK O4 NAG K 1 C1 NAG K 2 1555 1555 1.44 LINK O4 NAG K 2 C1 BMA K 3 1555 1555 1.43 LINK O6 BMA K 3 C1 MAN K 4 1555 1555 1.44 LINK O3 BMA K 3 C1 MAN K 9 1555 1555 1.43 LINK O3 MAN K 4 C1 MAN K 5 1555 1555 1.44 LINK O6 MAN K 4 C1 MAN K 7 1555 1555 1.43 LINK O2 MAN K 5 C1 MAN K 6 1555 1555 1.45 LINK O2 MAN K 7 C1 MAN K 8 1555 1555 1.44 LINK O2 MAN K 9 C1 MAN K 10 1555 1555 1.43 LINK O4 NAG L 1 C1 NAG L 2 1555 1555 1.44 LINK O4 NAG L 2 C1 BMA L 3 1555 1555 1.43 LINK O3 BMA L 3 C1 MAN L 4 1555 1555 1.43 CISPEP 1 GLY A 87 PRO A 88 0 4.97 CISPEP 2 ILE A 429 ASN A 430 0 2.87 CISPEP 3 GLY B 87 PRO B 88 0 5.44 CRYST1 94.960 63.723 219.925 90.00 99.75 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010531 0.000000 0.001810 0.00000 SCALE2 0.000000 0.015693 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004614 0.00000 MTRIX1 1 -0.999919 0.003412 -0.012247 30.43790 1 MTRIX2 1 0.003437 0.999992 -0.002066 -27.11790 1 MTRIX3 1 0.012240 -0.002108 -0.999923 107.68600 1