PDB Short entry for 4U04 HEADER TRANSFERASE 11-JUL-14 4U04 TITLE STRUCTURE OF A EUKARYOTIC FIC DOMAIN CONTAINING PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: ADENOSINE MONOPHOSPHATE-PROTEIN TRANSFERASE FICD; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 102-445; COMPND 5 SYNONYM: HYPE, AMPYLATOR FICD,FIC DOMAIN-CONTAINING PROTEIN, COMPND 6 HUNTINGTIN YEAST PARTNER E,HUNTINGTIN-INTERACTING PROTEIN 13,HIP-13, COMPND 7 HUNTINGTIN-INTERACTING PROTEIN E; COMPND 8 EC: 2.7.7.-; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: FICD, HIP13, HYPE, UNQ3041/PRO9857; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ADENYLATION, TPR, FIC, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR A.R.COLE,T.D.BUNNEY,M.KATAN REVDAT 3 20-DEC-23 4U04 1 REMARK REVDAT 2 04-FEB-15 4U04 1 JRNL REVDAT 1 10-DEC-14 4U04 0 JRNL AUTH T.D.BUNNEY,A.R.COLE,M.BRONCEL,D.ESPOSITO,E.W.TATE,M.KATAN JRNL TITL CRYSTAL STRUCTURE OF THE HUMAN, FIC-DOMAIN CONTAINING JRNL TITL 2 PROTEIN HYPE AND IMPLICATIONS FOR ITS FUNCTIONS. JRNL REF STRUCTURE V. 22 1831 2014 JRNL REFN ISSN 0969-2126 JRNL PMID 25435325 JRNL DOI 10.1016/J.STR.2014.10.007 REMARK 2 REMARK 2 RESOLUTION. 2.48 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.0 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.48 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.81 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 3 NUMBER OF REFLECTIONS : 33248 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.219 REMARK 3 R VALUE (WORKING SET) : 0.218 REMARK 3 FREE R VALUE : 0.245 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.080 REMARK 3 FREE R VALUE TEST SET COUNT : 1688 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 17 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.48 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.56 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.62 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2304 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2591 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2204 REMARK 3 BIN R VALUE (WORKING SET) : 0.2573 REMARK 3 BIN FREE R VALUE : 0.3012 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.34 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 100 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4990 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 36 REMARK 3 SOLVENT ATOMS : 158 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 71.78 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 80.28 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.83900 REMARK 3 B22 (A**2) : 4.61290 REMARK 3 B33 (A**2) : -3.77390 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -22.39550 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.509 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.332 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.234 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.909 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.900 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 9940 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 17898 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 2175 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 114 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 1531 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 9940 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 699 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 10759 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 0.97 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.50 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 18.53 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 13 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|108 - A|136 } REMARK 3 ORIGIN FOR THE GROUP (A): -38.6568 -9.0736 22.2322 REMARK 3 T TENSOR REMARK 3 T11: 0.2587 T22: -0.1678 REMARK 3 T33: -0.0633 T12: 0.0880 REMARK 3 T13: 0.0978 T23: 0.1840 REMARK 3 L TENSOR REMARK 3 L11: -0.2623 L22: 0.9223 REMARK 3 L33: 2.6683 L12: 0.6920 REMARK 3 L13: 0.7082 L23: -2.7180 REMARK 3 S TENSOR REMARK 3 S11: 0.0076 S12: -0.0705 S13: -0.0330 REMARK 3 S21: 0.0029 S22: -0.0045 S23: -0.0293 REMARK 3 S31: 0.0324 S32: 0.0003 S33: -0.0031 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { A|137 - A|177 } REMARK 3 ORIGIN FOR THE GROUP (A): -43.1024 -4.9890 10.2455 REMARK 3 T TENSOR REMARK 3 T11: 0.1547 T22: -0.2081 REMARK 3 T33: -0.0458 T12: -0.0375 REMARK 3 T13: 0.2612 T23: 0.0755 REMARK 3 L TENSOR REMARK 3 L11: 2.6440 L22: 2.9190 REMARK 3 L33: 0.8547 L12: -1.4298 REMARK 3 L13: -1.1981 L23: 1.3290 REMARK 3 S TENSOR REMARK 3 S11: -0.0665 S12: 0.0200 S13: -0.0460 REMARK 3 S21: 0.0840 S22: 0.0297 S23: 0.0663 REMARK 3 S31: 0.1986 S32: -0.1801 S33: 0.0368 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: { A|178 - A|207 } REMARK 3 ORIGIN FOR THE GROUP (A): -33.3533 8.1514 -0.6650 REMARK 3 T TENSOR REMARK 3 T11: 0.0030 T22: -0.1896 REMARK 3 T33: 0.0724 T12: 0.0257 REMARK 3 T13: 0.0672 T23: 0.0588 REMARK 3 L TENSOR REMARK 3 L11: 0.8853 L22: 1.0749 REMARK 3 L33: 1.9984 L12: -1.1527 REMARK 3 L13: -0.2802 L23: 2.3914 REMARK 3 S TENSOR REMARK 3 S11: -0.0415 S12: 0.0596 S13: 0.0579 REMARK 3 S21: 0.0598 S22: 0.0007 S23: 0.1237 REMARK 3 S31: -0.1421 S32: 0.0335 S33: 0.0408 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: { A|222 - A|255 } REMARK 3 ORIGIN FOR THE GROUP (A): -2.8420 -10.2938 -4.7924 REMARK 3 T TENSOR REMARK 3 T11: -0.0369 T22: -0.0812 REMARK 3 T33: 0.0170 T12: 0.1007 REMARK 3 T13: -0.1680 T23: -0.1270 REMARK 3 L TENSOR REMARK 3 L11: 4.1436 L22: 3.1917 REMARK 3 L33: 4.0260 L12: -1.7639 REMARK 3 L13: -0.0950 L23: 0.2097 REMARK 3 S TENSOR REMARK 3 S11: -0.0983 S12: -0.1779 S13: 0.1101 REMARK 3 S21: 0.1102 S22: -0.0356 S23: -0.0587 REMARK 3 S31: 0.0819 S32: 0.0397 S33: 0.1340 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: { A|256 - A|308 } REMARK 3 ORIGIN FOR THE GROUP (A): -11.6897 -13.5345 -17.0210 REMARK 3 T TENSOR REMARK 3 T11: -0.0164 T22: -0.1989 REMARK 3 T33: -0.0919 T12: -0.0736 REMARK 3 T13: 0.0903 T23: 0.0028 REMARK 3 L TENSOR REMARK 3 L11: 5.2571 L22: 4.4828 REMARK 3 L33: 2.0316 L12: -1.5023 REMARK 3 L13: -1.9622 L23: 2.2384 REMARK 3 S TENSOR REMARK 3 S11: -0.1594 S12: 0.2942 S13: 0.0994 REMARK 3 S21: -0.1017 S22: 0.1003 S23: -0.1519 REMARK 3 S31: 0.1758 S32: 0.2277 S33: 0.0591 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: { A|309 - A|433 } REMARK 3 ORIGIN FOR THE GROUP (A): -24.9130 -8.1418 -8.6615 REMARK 3 T TENSOR REMARK 3 T11: -0.1573 T22: -0.1422 REMARK 3 T33: -0.1651 T12: -0.0054 REMARK 3 T13: -0.1049 T23: 0.0279 REMARK 3 L TENSOR REMARK 3 L11: 2.5943 L22: 7.0491 REMARK 3 L33: 3.6271 L12: -1.2313 REMARK 3 L13: -1.4524 L23: 1.6265 REMARK 3 S TENSOR REMARK 3 S11: -0.3815 S12: 0.2150 S13: -0.1115 REMARK 3 S21: 0.1251 S22: 0.1289 S23: 0.5998 REMARK 3 S31: 0.2043 S32: -0.1772 S33: 0.2526 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: { B|108 - B|135 } REMARK 3 ORIGIN FOR THE GROUP (A): 37.5312 -35.8314 -46.6368 REMARK 3 T TENSOR REMARK 3 T11: 0.0322 T22: 0.0018 REMARK 3 T33: 0.0451 T12: -0.1147 REMARK 3 T13: 0.1392 T23: -0.0726 REMARK 3 L TENSOR REMARK 3 L11: 0.4544 L22: 0.9161 REMARK 3 L33: 0.0297 L12: 0.8584 REMARK 3 L13: -0.6594 L23: -0.4670 REMARK 3 S TENSOR REMARK 3 S11: 0.0001 S12: 0.0143 S13: 0.0380 REMARK 3 S21: 0.0441 S22: -0.0078 S23: -0.0319 REMARK 3 S31: -0.0107 S32: 0.1092 S33: 0.0077 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: { B|136 - B|179 } REMARK 3 ORIGIN FOR THE GROUP (A): 25.6846 -39.6940 -51.4281 REMARK 3 T TENSOR REMARK 3 T11: 0.1551 T22: -0.3010 REMARK 3 T33: -0.1562 T12: -0.1504 REMARK 3 T13: 0.3016 T23: 0.0747 REMARK 3 L TENSOR REMARK 3 L11: 1.9900 L22: 6.6415 REMARK 3 L33: 4.8016 L12: -0.2583 REMARK 3 L13: -3.3921 L23: 1.9976 REMARK 3 S TENSOR REMARK 3 S11: -0.1082 S12: 0.1619 S13: 0.4031 REMARK 3 S21: 0.1206 S22: 0.0897 S23: 0.0203 REMARK 3 S31: -0.0497 S32: 0.1034 S33: 0.0185 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: { B|180 - B|203 } REMARK 3 ORIGIN FOR THE GROUP (A): 14.7515 -52.4141 -41.4390 REMARK 3 T TENSOR REMARK 3 T11: 0.1622 T22: -0.3040 REMARK 3 T33: -0.0981 T12: 0.0239 REMARK 3 T13: 0.2830 T23: -0.0119 REMARK 3 L TENSOR REMARK 3 L11: 2.4668 L22: 5.2519 REMARK 3 L33: -0.8346 L12: -1.8259 REMARK 3 L13: -2.3846 L23: 2.4507 REMARK 3 S TENSOR REMARK 3 S11: 0.0168 S12: 0.1320 S13: -0.0569 REMARK 3 S21: 0.0687 S22: -0.0264 S23: 0.0185 REMARK 3 S31: 0.0867 S32: -0.0259 S33: 0.0097 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: { B|204 - B|222 } REMARK 3 ORIGIN FOR THE GROUP (A): 6.3240 -52.2090 -16.4367 REMARK 3 T TENSOR REMARK 3 T11: 0.0228 T22: -0.0213 REMARK 3 T33: 0.0895 T12: -0.0228 REMARK 3 T13: 0.0462 T23: -0.0103 REMARK 3 L TENSOR REMARK 3 L11: 0.6193 L22: 0.1460 REMARK 3 L33: 0.0999 L12: 0.1594 REMARK 3 L13: -0.6468 L23: -0.1969 REMARK 3 S TENSOR REMARK 3 S11: -0.0006 S12: -0.0254 S13: 0.0154 REMARK 3 S21: 0.0133 S22: 0.0016 S23: 0.0015 REMARK 3 S31: -0.0255 S32: -0.0132 S33: -0.0010 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: { B|223 - B|255 } REMARK 3 ORIGIN FOR THE GROUP (A): 7.6073 -31.2171 -12.1890 REMARK 3 T TENSOR REMARK 3 T11: 0.1579 T22: -0.2189 REMARK 3 T33: -0.1132 T12: 0.1520 REMARK 3 T13: 0.1278 T23: 0.0240 REMARK 3 L TENSOR REMARK 3 L11: 2.6922 L22: 4.4654 REMARK 3 L33: 1.2433 L12: 0.5166 REMARK 3 L13: -0.0309 L23: -2.6409 REMARK 3 S TENSOR REMARK 3 S11: -0.0442 S12: -0.0491 S13: -0.0454 REMARK 3 S21: 0.1102 S22: 0.0486 S23: -0.2487 REMARK 3 S31: 0.1430 S32: 0.0246 S33: -0.0044 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: { B|256 - B|308 } REMARK 3 ORIGIN FOR THE GROUP (A): -4.4360 -30.2370 -22.4223 REMARK 3 T TENSOR REMARK 3 T11: 0.1571 T22: -0.2477 REMARK 3 T33: -0.0784 T12: -0.0149 REMARK 3 T13: 0.2723 T23: 0.0444 REMARK 3 L TENSOR REMARK 3 L11: 1.6881 L22: 2.4714 REMARK 3 L33: 2.9907 L12: -2.1263 REMARK 3 L13: -0.0308 L23: 1.7806 REMARK 3 S TENSOR REMARK 3 S11: -0.1734 S12: -0.1479 S13: -0.0941 REMARK 3 S21: 0.1198 S22: 0.0316 S23: 0.0187 REMARK 3 S31: 0.2105 S32: -0.1854 S33: 0.1418 REMARK 3 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: { B|309 - B|434 } REMARK 3 ORIGIN FOR THE GROUP (A): 5.4148 -35.7037 -34.2722 REMARK 3 T TENSOR REMARK 3 T11: 0.1230 T22: -0.3040 REMARK 3 T33: -0.1596 T12: -0.0600 REMARK 3 T13: 0.2911 T23: -0.0118 REMARK 3 L TENSOR REMARK 3 L11: 3.0248 L22: 5.6947 REMARK 3 L33: 3.8240 L12: -2.8488 REMARK 3 L13: -1.5312 L23: 0.8195 REMARK 3 S TENSOR REMARK 3 S11: -0.1479 S12: 0.1094 S13: -0.0124 REMARK 3 S21: -0.3017 S22: -0.0046 S23: -0.1573 REMARK 3 S31: 0.2999 S32: -0.1824 S33: 0.1524 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4U04 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 11-JUL-14. REMARK 100 THE DEPOSITION ID IS D_1000202546. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-JUL-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I24 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9686 REMARK 200 MONOCHROMATOR : DOUBLE XTAL MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33248 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.480 REMARK 200 RESOLUTION RANGE LOW (A) : 47.193 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 200 DATA REDUNDANCY : 3.100 REMARK 200 R MERGE (I) : 0.08800 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 6.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.48 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.61 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.7 REMARK 200 DATA REDUNDANCY IN SHELL : 3.00 REMARK 200 R MERGE FOR SHELL (I) : 0.85400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3CUC REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.84 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.06 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 3350, 200MM NA K TARTRATE, REMARK 280 100MM BIS-TRIS PROPANE 7.5, PH 7.5, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 38.40450 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2800 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 30770 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -5.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 102 REMARK 465 LYS A 103 REMARK 465 LEU A 104 REMARK 465 GLU A 105 REMARK 465 ALA A 106 REMARK 465 PRO A 209 REMARK 465 LYS A 210 REMARK 465 GLY A 211 REMARK 465 ASN A 212 REMARK 465 SER A 213 REMARK 465 ALA A 214 REMARK 465 LEU A 215 REMARK 465 ARG A 216 REMARK 465 ARG A 217 REMARK 465 VAL A 218 REMARK 465 MET A 219 REMARK 465 GLU A 220 REMARK 465 THR A 434 REMARK 465 GLU A 435 REMARK 465 TYR A 436 REMARK 465 SER A 437 REMARK 465 VAL A 438 REMARK 465 ALA A 439 REMARK 465 LEU A 440 REMARK 465 PRO A 441 REMARK 465 GLU A 442 REMARK 465 ALA A 443 REMARK 465 GLN A 444 REMARK 465 PRO A 445 REMARK 465 GLY B 102 REMARK 465 LYS B 103 REMARK 465 LEU B 104 REMARK 465 ILE B 208 REMARK 465 PRO B 209 REMARK 465 LYS B 210 REMARK 465 GLY B 211 REMARK 465 ASN B 212 REMARK 465 SER B 213 REMARK 465 GLU B 435 REMARK 465 TYR B 436 REMARK 465 SER B 437 REMARK 465 VAL B 438 REMARK 465 ALA B 439 REMARK 465 LEU B 440 REMARK 465 PRO B 441 REMARK 465 GLU B 442 REMARK 465 ALA B 443 REMARK 465 GLN B 444 REMARK 465 PRO B 445 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 107 CZ NH1 NH2 REMARK 470 GLN A 112 CG CD OE1 NE2 REMARK 470 GLU A 115 CG CD OE1 OE2 REMARK 470 LYS A 117 CG CD CE NZ REMARK 470 ARG A 118 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 119 CG CD OE1 NE2 REMARK 470 LYS A 121 CG CD CE NZ REMARK 470 GLU A 123 CG CD OE1 OE2 REMARK 470 LYS A 124 CG CD CE NZ REMARK 470 LYS A 127 CG CD CE NZ REMARK 470 LEU A 128 CG CD1 CD2 REMARK 470 MET A 130 CG SD CE REMARK 470 LYS A 134 CD CE NZ REMARK 470 GLU A 145 CG CD OE1 OE2 REMARK 470 ARG A 165 NE CZ NH1 NH2 REMARK 470 GLU A 174 CG CD OE1 OE2 REMARK 470 LEU A 177 CG CD1 CD2 REMARK 470 LYS A 203 CE NZ REMARK 470 LYS A 204 CE NZ REMARK 470 MET A 206 CG SD CE REMARK 470 ILE A 208 CG1 CG2 CD1 REMARK 470 GLU A 221 CG CD OE1 OE2 REMARK 470 ARG A 244 CD NE CZ NH1 NH2 REMARK 470 LYS A 256 NZ REMARK 470 ILE A 282 CG1 CG2 CD1 REMARK 470 ILE A 366 CG1 CG2 CD1 REMARK 470 THR A 372 CG2 REMARK 470 LYS A 393 CE NZ REMARK 470 ARG A 396 CZ NH1 NH2 REMARK 470 GLU A 408 OE1 OE2 REMARK 470 LYS A 420 CG CD CE NZ REMARK 470 ASN B 111 CG OD1 ND2 REMARK 470 GLN B 112 CG CD OE1 NE2 REMARK 470 GLU B 115 CG CD OE1 OE2 REMARK 470 ARG B 118 CG CD NE CZ NH1 NH2 REMARK 470 GLN B 119 CG CD OE1 NE2 REMARK 470 LYS B 121 CG CD CE NZ REMARK 470 GLU B 123 CG CD OE1 OE2 REMARK 470 LYS B 124 CG CD CE NZ REMARK 470 LYS B 127 CG CD CE NZ REMARK 470 LEU B 128 CG CD1 CD2 REMARK 470 LYS B 134 CG CD CE NZ REMARK 470 GLU B 145 CG CD OE1 OE2 REMARK 470 MET B 206 CG SD CE REMARK 470 LEU B 215 CG CD1 CD2 REMARK 470 ARG B 216 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 217 CG CD NE CZ NH1 NH2 REMARK 470 MET B 219 CG SD CE REMARK 470 GLU B 221 CG CD OE1 OE2 REMARK 470 GLU B 248 CG CD OE1 OE2 REMARK 470 LYS B 272 CD CE NZ REMARK 470 GLU B 341 CG CD OE1 OE2 REMARK 470 THR B 372 CG2 REMARK 470 THR B 390 CG2 REMARK 470 LYS B 393 CD CE NZ REMARK 470 GLU B 408 CG CD OE1 OE2 REMARK 470 LYS B 420 CD CE NZ REMARK 470 LEU B 430 CG CD1 CD2 REMARK 470 THR B 433 OG1 CG2 REMARK 470 THR B 434 OG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 121 92.24 -39.79 REMARK 500 LYS B 121 91.18 -40.84 REMARK 500 THR B 433 57.49 -104.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 648 DISTANCE = 6.54 ANGSTROMS REMARK 525 HOH A 651 DISTANCE = 8.27 ANGSTROMS REMARK 525 HOH A 652 DISTANCE = 6.34 ANGSTROMS REMARK 525 HOH A 655 DISTANCE = 7.29 ANGSTROMS REMARK 525 HOH A 670 DISTANCE = 6.87 ANGSTROMS REMARK 525 HOH A 673 DISTANCE = 7.54 ANGSTROMS REMARK 525 HOH A 676 DISTANCE = 7.23 ANGSTROMS REMARK 525 HOH A 694 DISTANCE = 8.45 ANGSTROMS REMARK 525 HOH B 626 DISTANCE = 7.52 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue TAR A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PG4 A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PG4 B 501 DBREF 4U04 A 102 445 UNP Q9BVA6 FICD_HUMAN 102 445 DBREF 4U04 B 102 445 UNP Q9BVA6 FICD_HUMAN 102 445 SEQRES 1 A 344 GLY LYS LEU GLU ALA ARG ALA ALA LEU ASN GLN ALA LEU SEQRES 2 A 344 GLU MET LYS ARG GLN GLY LYS ARG GLU LYS ALA GLN LYS SEQRES 3 A 344 LEU PHE MET HIS ALA LEU LYS MET ASP PRO ASP PHE VAL SEQRES 4 A 344 ASP ALA LEU THR GLU PHE GLY ILE PHE SER GLU GLU ASP SEQRES 5 A 344 LYS ASP ILE ILE GLN ALA ASP TYR LEU TYR THR ARG ALA SEQRES 6 A 344 LEU THR ILE SER PRO TYR HIS GLU LYS ALA LEU VAL ASN SEQRES 7 A 344 ARG ASP ARG THR LEU PRO LEU VAL GLU GLU ILE ASP GLN SEQRES 8 A 344 ARG TYR PHE SER ILE ILE ASP SER LYS VAL LYS LYS VAL SEQRES 9 A 344 MET SER ILE PRO LYS GLY ASN SER ALA LEU ARG ARG VAL SEQRES 10 A 344 MET GLU GLU THR TYR TYR HIS HIS ILE TYR HIS THR VAL SEQRES 11 A 344 ALA ILE GLU GLY ASN THR LEU THR LEU SER GLU ILE ARG SEQRES 12 A 344 HIS ILE LEU GLU THR ARG TYR ALA VAL PRO GLY LYS SER SEQRES 13 A 344 LEU GLU GLU GLN ASN GLU VAL ILE GLY MET HIS ALA ALA SEQRES 14 A 344 MET LYS TYR ILE ASN THR THR LEU VAL SER ARG ILE GLY SEQRES 15 A 344 SER VAL THR ILE SER ASP VAL LEU GLU ILE HIS ARG ARG SEQRES 16 A 344 VAL LEU GLY TYR VAL ASP PRO VAL GLU ALA GLY ARG PHE SEQRES 17 A 344 ARG THR THR GLN VAL LEU VAL GLY HIS HIS ILE PRO PRO SEQRES 18 A 344 HIS PRO GLN ASP VAL GLU LYS GLN MET GLN GLU PHE VAL SEQRES 19 A 344 GLN TRP LEU ASN SER GLU GLU ALA MET ASN LEU HIS PRO SEQRES 20 A 344 VAL GLU PHE ALA ALA LEU ALA HIS TYR LYS LEU VAL TYR SEQRES 21 A 344 ILE HIS PRO PHE ILE ASP GLY ASN GLY ARG THR SER ARG SEQRES 22 A 344 LEU LEU MET ASN LEU ILE LEU MET GLN ALA GLY TYR PRO SEQRES 23 A 344 PRO ILE THR ILE ARG LYS GLU GLN ARG SER ASP TYR TYR SEQRES 24 A 344 HIS VAL LEU GLU ALA ALA ASN GLU GLY ASP VAL ARG PRO SEQRES 25 A 344 PHE ILE ARG PHE ILE ALA LYS CYS THR GLU THR THR LEU SEQRES 26 A 344 ASP THR LEU LEU PHE ALA THR THR GLU TYR SER VAL ALA SEQRES 27 A 344 LEU PRO GLU ALA GLN PRO SEQRES 1 B 344 GLY LYS LEU GLU ALA ARG ALA ALA LEU ASN GLN ALA LEU SEQRES 2 B 344 GLU MET LYS ARG GLN GLY LYS ARG GLU LYS ALA GLN LYS SEQRES 3 B 344 LEU PHE MET HIS ALA LEU LYS MET ASP PRO ASP PHE VAL SEQRES 4 B 344 ASP ALA LEU THR GLU PHE GLY ILE PHE SER GLU GLU ASP SEQRES 5 B 344 LYS ASP ILE ILE GLN ALA ASP TYR LEU TYR THR ARG ALA SEQRES 6 B 344 LEU THR ILE SER PRO TYR HIS GLU LYS ALA LEU VAL ASN SEQRES 7 B 344 ARG ASP ARG THR LEU PRO LEU VAL GLU GLU ILE ASP GLN SEQRES 8 B 344 ARG TYR PHE SER ILE ILE ASP SER LYS VAL LYS LYS VAL SEQRES 9 B 344 MET SER ILE PRO LYS GLY ASN SER ALA LEU ARG ARG VAL SEQRES 10 B 344 MET GLU GLU THR TYR TYR HIS HIS ILE TYR HIS THR VAL SEQRES 11 B 344 ALA ILE GLU GLY ASN THR LEU THR LEU SER GLU ILE ARG SEQRES 12 B 344 HIS ILE LEU GLU THR ARG TYR ALA VAL PRO GLY LYS SER SEQRES 13 B 344 LEU GLU GLU GLN ASN GLU VAL ILE GLY MET HIS ALA ALA SEQRES 14 B 344 MET LYS TYR ILE ASN THR THR LEU VAL SER ARG ILE GLY SEQRES 15 B 344 SER VAL THR ILE SER ASP VAL LEU GLU ILE HIS ARG ARG SEQRES 16 B 344 VAL LEU GLY TYR VAL ASP PRO VAL GLU ALA GLY ARG PHE SEQRES 17 B 344 ARG THR THR GLN VAL LEU VAL GLY HIS HIS ILE PRO PRO SEQRES 18 B 344 HIS PRO GLN ASP VAL GLU LYS GLN MET GLN GLU PHE VAL SEQRES 19 B 344 GLN TRP LEU ASN SER GLU GLU ALA MET ASN LEU HIS PRO SEQRES 20 B 344 VAL GLU PHE ALA ALA LEU ALA HIS TYR LYS LEU VAL TYR SEQRES 21 B 344 ILE HIS PRO PHE ILE ASP GLY ASN GLY ARG THR SER ARG SEQRES 22 B 344 LEU LEU MET ASN LEU ILE LEU MET GLN ALA GLY TYR PRO SEQRES 23 B 344 PRO ILE THR ILE ARG LYS GLU GLN ARG SER ASP TYR TYR SEQRES 24 B 344 HIS VAL LEU GLU ALA ALA ASN GLU GLY ASP VAL ARG PRO SEQRES 25 B 344 PHE ILE ARG PHE ILE ALA LYS CYS THR GLU THR THR LEU SEQRES 26 B 344 ASP THR LEU LEU PHE ALA THR THR GLU TYR SER VAL ALA SEQRES 27 B 344 LEU PRO GLU ALA GLN PRO HET TAR A 501 10 HET PG4 A 502 13 HET PG4 B 501 13 HETNAM TAR D(-)-TARTARIC ACID HETNAM PG4 TETRAETHYLENE GLYCOL FORMUL 3 TAR C4 H6 O6 FORMUL 4 PG4 2(C8 H18 O5) FORMUL 6 HOH *158(H2 O) HELIX 1 AA1 ARG A 107 GLY A 120 1 14 HELIX 2 AA2 LYS A 121 ASP A 136 1 16 HELIX 3 AA3 PHE A 139 GLU A 152 1 14 HELIX 4 AA4 ASP A 155 SER A 170 1 16 HELIX 5 AA5 HIS A 173 ILE A 208 1 36 HELIX 6 AA6 THR A 222 ILE A 233 1 12 HELIX 7 AA7 THR A 239 ARG A 250 1 12 HELIX 8 AA8 SER A 257 LEU A 278 1 22 HELIX 9 AA9 THR A 286 LEU A 298 1 13 HELIX 10 AB1 HIS A 323 SER A 340 1 18 HELIX 11 AB2 SER A 340 LEU A 346 1 7 HELIX 12 AB3 HIS A 347 HIS A 363 1 17 HELIX 13 AB4 GLY A 368 ALA A 384 1 17 HELIX 14 AB5 ARG A 392 GLU A 394 5 3 HELIX 15 AB6 GLN A 395 GLY A 409 1 15 HELIX 16 AB7 VAL A 411 LEU A 430 1 20 HELIX 17 AB8 ALA B 106 GLY B 120 1 15 HELIX 18 AB9 LYS B 121 ASP B 136 1 16 HELIX 19 AC1 PHE B 139 GLU B 152 1 14 HELIX 20 AC2 ASP B 155 LEU B 167 1 13 HELIX 21 AC3 HIS B 173 MET B 206 1 34 HELIX 22 AC4 LEU B 215 THR B 222 1 8 HELIX 23 AC5 THR B 222 ILE B 233 1 12 HELIX 24 AC6 THR B 239 ARG B 250 1 12 HELIX 25 AC7 SER B 257 LEU B 278 1 22 HELIX 26 AC8 THR B 286 GLY B 299 1 14 HELIX 27 AC9 ASP B 326 SER B 340 1 15 HELIX 28 AD1 SER B 340 LEU B 346 1 7 HELIX 29 AD2 HIS B 347 HIS B 363 1 17 HELIX 30 AD3 GLY B 368 ALA B 384 1 17 HELIX 31 AD4 ARG B 392 GLU B 394 5 3 HELIX 32 AD5 GLN B 395 GLY B 409 1 15 HELIX 33 AD6 VAL B 411 THR B 433 1 23 SITE 1 AC1 8 GLU A 234 HIS A 363 ASP A 367 GLY A 368 SITE 2 AC1 8 ASN A 369 GLY A 370 ARG A 371 HOH A 643 SITE 1 AC2 4 TRP A 337 LEU A 354 TYR A 357 LYS A 358 SITE 1 AC3 2 TRP B 337 LYS B 358 CRYST1 71.186 76.809 93.195 90.00 108.05 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014048 0.000000 0.004578 0.00000 SCALE2 0.000000 0.013019 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011286 0.00000