PDB Short entry for 4U13 HEADER TRANSFERASE 14-JUL-14 4U13 TITLE CRYSTAL STRUCTURE OF PUTATIVE POLYKETIDE CYCLASE (PROTEIN SMA1630) TITLE 2 FROM SINORHIZOBIUM MELILOTI AT 2.3 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE POLYKETIDE CYCLASE SMA1630; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: THE PROTEIN WAS EXPRESSED WITH HIS-TAG BUT WAS COMPND 6 SUBJECTED TO LIMITED PROTEOLYSIS WITH CHYMOTRYPSIN. SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SINORHIZOBIUM MELILOTI 1021; SOURCE 3 ORGANISM_COMMON: ENSIFER MELILOTI; SOURCE 4 ORGANISM_TAXID: 266834; SOURCE 5 GENE: SMA1630; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: RIL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PSGC-HIS KEYWDS PSI-BIOLOGY, NYSGRC, PUTATIVE POLYKETIDE CYCLASE, PROTEIN SMA1630, KEYWDS 2 STRUCTURAL GENOMICS, NEW YORK STRUCTURAL GENOMICS RESEARCH KEYWDS 3 CONSORTIUM, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR I.G.SHABALIN,P.BACAL,T.OSINSKI,D.R.COOPER,K.SZLACHTA,M.STEAD, AUTHOR 2 M.GRABOWSKI,J.HAMMONDS,M.AHMED,B.S.HILLERICH,J.BONANNO,R.SEIDEL, AUTHOR 3 S.C.ALMO,W.MINOR,NEW YORK STRUCTURAL GENOMICS RESEARCH CONSORTIUM AUTHOR 4 (NYSGRC) REVDAT 8 15-NOV-23 4U13 1 REMARK REVDAT 7 27-SEP-23 4U13 1 REMARK REVDAT 6 13-APR-22 4U13 1 AUTHOR JRNL REVDAT 5 25-DEC-19 4U13 1 REMARK REVDAT 4 20-SEP-17 4U13 1 REMARK REVDAT 3 26-AUG-15 4U13 1 REMARK REVDAT 2 24-SEP-14 4U13 1 REMARK REVDAT 1 10-SEP-14 4U13 0 JRNL AUTH I.G.SHABALIN,P.BACAL,T.OSINSKI,D.R.COOPER,K.SZLACHTA, JRNL AUTH 2 M.STEAD,M.GRABOWSKI,J.HAMMONDS,M.AHMED,B.S.HILLERICH, JRNL AUTH 3 J.BONANNO,R.SEIDEL,S.C.ALMO,W.MINOR JRNL TITL CRYSTAL STRUCTURE OF A PUTATIVE POLYKETIDE CYCLASE (PROTEIN JRNL TITL 2 SMA1630) FROM SINORHIZOBIUM MELILOTI AT 2.3 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0073 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 10348 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.194 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.224 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 535 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.36 REMARK 3 REFLECTION IN BIN (WORKING SET) : 646 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 87.71 REMARK 3 BIN R VALUE (WORKING SET) : 0.2840 REMARK 3 BIN FREE R VALUE SET COUNT : 32 REMARK 3 BIN FREE R VALUE : 0.3670 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1635 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 21 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 55.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 65.06 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.65000 REMARK 3 B22 (A**2) : -1.72000 REMARK 3 B33 (A**2) : -1.44000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 1.20000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.326 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.216 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.195 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 18.364 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.965 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.951 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1670 ; 0.017 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 1561 ; 0.004 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2276 ; 1.689 ; 1.953 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3568 ; 0.992 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 216 ; 6.046 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 67 ;33.953 ;23.134 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 237 ;16.349 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;17.038 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 264 ; 0.098 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1902 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 378 ; 0.004 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 870 ; 2.652 ; 3.484 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 869 ; 2.648 ; 3.482 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1084 ; 4.021 ; 5.208 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A -2 106 B -2 106 5738 0.060 0.050 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -2 A 9 REMARK 3 ORIGIN FOR THE GROUP (A): 17.1060 24.2430 41.9560 REMARK 3 T TENSOR REMARK 3 T11: 0.4407 T22: 0.1779 REMARK 3 T33: 0.3578 T12: 0.1542 REMARK 3 T13: 0.1180 T23: -0.0072 REMARK 3 L TENSOR REMARK 3 L11: 8.3526 L22: 4.3914 REMARK 3 L33: 20.6032 L12: 1.5413 REMARK 3 L13: 6.7275 L23: 1.5279 REMARK 3 S TENSOR REMARK 3 S11: 0.3292 S12: 0.0307 S13: -1.0980 REMARK 3 S21: -0.3320 S22: 0.2366 S23: -0.4992 REMARK 3 S31: 0.5052 S32: 0.1281 S33: -0.5657 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 10 A 45 REMARK 3 ORIGIN FOR THE GROUP (A): 15.7880 35.7260 53.8390 REMARK 3 T TENSOR REMARK 3 T11: 0.3383 T22: 0.2680 REMARK 3 T33: 0.2113 T12: 0.0583 REMARK 3 T13: 0.0434 T23: 0.0207 REMARK 3 L TENSOR REMARK 3 L11: 3.4296 L22: 2.0074 REMARK 3 L33: 5.8543 L12: 2.3460 REMARK 3 L13: 0.0979 L23: 0.3272 REMARK 3 S TENSOR REMARK 3 S11: 0.2254 S12: -0.2394 S13: -0.0937 REMARK 3 S21: 0.2158 S22: -0.2352 S23: 0.0850 REMARK 3 S31: -0.0979 S32: 0.5049 S33: 0.0097 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 46 A 106 REMARK 3 ORIGIN FOR THE GROUP (A): 14.5030 36.9550 44.8470 REMARK 3 T TENSOR REMARK 3 T11: 0.3743 T22: 0.2515 REMARK 3 T33: 0.2589 T12: 0.0636 REMARK 3 T13: 0.0904 T23: 0.0391 REMARK 3 L TENSOR REMARK 3 L11: 1.3331 L22: 0.7990 REMARK 3 L33: 2.8345 L12: -0.2040 REMARK 3 L13: -0.4849 L23: 0.6180 REMARK 3 S TENSOR REMARK 3 S11: 0.1075 S12: -0.0114 S13: -0.0915 REMARK 3 S21: 0.1247 S22: -0.0725 S23: 0.0899 REMARK 3 S31: -0.0803 S32: 0.3320 S33: -0.0350 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B -2 B 12 REMARK 3 ORIGIN FOR THE GROUP (A): -0.7850 26.9580 36.7690 REMARK 3 T TENSOR REMARK 3 T11: 0.4557 T22: 0.2406 REMARK 3 T33: 0.1979 T12: 0.1485 REMARK 3 T13: 0.0161 T23: 0.0645 REMARK 3 L TENSOR REMARK 3 L11: 5.2724 L22: 4.1318 REMARK 3 L33: 5.5656 L12: 0.7522 REMARK 3 L13: -0.1755 L23: 2.9648 REMARK 3 S TENSOR REMARK 3 S11: 0.1226 S12: 0.3926 S13: 0.3315 REMARK 3 S21: -0.2433 S22: -0.2317 S23: -0.2597 REMARK 3 S31: -0.9969 S32: -0.3526 S33: 0.1092 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 13 B 37 REMARK 3 ORIGIN FOR THE GROUP (A): -7.0140 17.5900 45.0850 REMARK 3 T TENSOR REMARK 3 T11: 0.3833 T22: 0.2252 REMARK 3 T33: 0.1687 T12: 0.0653 REMARK 3 T13: 0.0050 T23: -0.0208 REMARK 3 L TENSOR REMARK 3 L11: 2.8319 L22: 4.2270 REMARK 3 L33: 4.0902 L12: 0.2082 REMARK 3 L13: -1.6000 L23: 0.7816 REMARK 3 S TENSOR REMARK 3 S11: 0.2724 S12: 0.0898 S13: -0.1416 REMARK 3 S21: 0.0338 S22: -0.4637 S23: 0.1271 REMARK 3 S31: -0.0875 S32: -0.3278 S33: 0.1913 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 38 B 106 REMARK 3 ORIGIN FOR THE GROUP (A): -2.2310 15.0240 39.3760 REMARK 3 T TENSOR REMARK 3 T11: 0.4207 T22: 0.2453 REMARK 3 T33: 0.1967 T12: 0.1050 REMARK 3 T13: 0.0362 T23: -0.0273 REMARK 3 L TENSOR REMARK 3 L11: 2.0232 L22: 1.7524 REMARK 3 L33: 2.2557 L12: -0.2751 REMARK 3 L13: -0.5658 L23: 0.3747 REMARK 3 S TENSOR REMARK 3 S11: 0.1800 S12: 0.1300 S13: -0.0093 REMARK 3 S21: -0.1962 S22: -0.2632 S23: -0.0208 REMARK 3 S31: -0.0735 S32: -0.2492 S33: 0.0833 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: U VALUES : WITH TLS ADDED HYDROGENS REMARK 3 HAVE BEEN ADDED IN THE RIDING POSITIONS REMARK 4 REMARK 4 4U13 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-JUL-14. REMARK 100 THE DEPOSITION ID IS D_1000202631. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-NOV-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-G REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97856 REMARK 200 MONOCHROMATOR : DIAMOND [111] REMARK 200 OPTICS : BERYLLIUM LENSES REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000, SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 10379 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : 0.07000 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 12.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.34 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.5 REMARK 200 DATA REDUNDANCY IN SHELL : 3.20 REMARK 200 R MERGE FOR SHELL (I) : 0.67400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: HKL-3000, PHENIX ROSETTA-MR REMARK 200 STARTING MODEL: 3FH1 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.33 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.43 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 UL OF 18 MG/ML PROTEIN IN 20 MM REMARK 280 HEPES PH 7.5, 150 MM NACL, 10% GLYCEROL, 0.1% SODIUM AZIDE AND REMARK 280 0.5 MM TCEP WERE MIXED WITH 0.2 UL OF THE MCSG CONDITION #96 REMARK 280 (0.2 M LITHIUM SULFATE, 0.1 M HEPES:NAOH PH 7.5, 25% (W/V) PEG REMARK 280 3350) AND EQUILIBRATED AGAINST 1.5 M NACL SOLUTION IN 96 WELL 3 REMARK 280 DROP CRYSTALLIZATION PLATE (SWISSCI). BEFORE CRYSTALLIZATION REMARK 280 PROTEIN WAS INCUBATED WITH 1/50 V/V OF 2 MG/ML CHYMOTRYPSIN REMARK 280 SOLUTION AT 289 K FOR 3 HOURS., VAPOR DIFFUSION, SITTING DROP REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 21.14750 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: BIOLOGICAL UNIT IS THE SAME AS ASYM. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 680 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11520 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -4.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 29 CG OD1 OD2 REMARK 470 GLU A 33 CD OE1 OE2 REMARK 470 ASP A 68 CG OD1 OD2 REMARK 470 ASP A 70 CG OD1 OD2 REMARK 470 LYS A 71 CE NZ REMARK 470 LYS A 96 CG CD CE NZ REMARK 470 GLU A 104 CG CD OE1 OE2 REMARK 470 GLN A 106 CG CD OE1 NE2 REMARK 470 GLU B 24 CD OE1 OE2 REMARK 470 ASP B 29 CG OD1 OD2 REMARK 470 GLU B 33 CD OE1 OE2 REMARK 470 ASP B 68 CG OD1 OD2 REMARK 470 ASP B 70 CG OD1 OD2 REMARK 470 LYS B 96 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP B 97 47.64 72.37 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: NYSGRC-021002 RELATED DB: TARGETTRACK DBREF 4U13 A 1 106 UNP Q92YJ1 Q92YJ1_RHIME 1 106 DBREF 4U13 B 1 106 UNP Q92YJ1 Q92YJ1_RHIME 1 106 SEQADV 4U13 PHE A -2 UNP Q92YJ1 EXPRESSION TAG SEQADV 4U13 GLN A -1 UNP Q92YJ1 EXPRESSION TAG SEQADV 4U13 SER A 0 UNP Q92YJ1 EXPRESSION TAG SEQADV 4U13 PHE B -2 UNP Q92YJ1 EXPRESSION TAG SEQADV 4U13 GLN B -1 UNP Q92YJ1 EXPRESSION TAG SEQADV 4U13 SER B 0 UNP Q92YJ1 EXPRESSION TAG SEQRES 1 A 109 PHE GLN SER MSE ASP LEU PRO ASP ILE VAL ASN MSE TYR SEQRES 2 A 109 PHE ASP ALA ASP SER CYS ASN ASP THR ASP ALA LEU SER SEQRES 3 A 109 GLU THR PHE ALA PRO ASP ALA VAL VAL GLU ASP GLU GLY SEQRES 4 A 109 ALA ARG HIS GLN GLY VAL VAL ALA ILE LEU ARG TRP TRP SEQRES 5 A 109 VAL ALA ALA LYS LYS ALA ALA SER TYR VAL ALA GLU PRO SEQRES 6 A 109 LEU GLU SER THR VAL ASP GLY ASP LYS ALA LEU VAL ARG SEQRES 7 A 109 ALA LYS VAL SER GLY ARG PHE PRO GLY SER PRO VAL THR SEQRES 8 A 109 LEU THR TYR SER PHE THR ILE LYS ASP GLY ARG ILE ALA SEQRES 9 A 109 ARG LEU GLU ILE GLN SEQRES 1 B 109 PHE GLN SER MSE ASP LEU PRO ASP ILE VAL ASN MSE TYR SEQRES 2 B 109 PHE ASP ALA ASP SER CYS ASN ASP THR ASP ALA LEU SER SEQRES 3 B 109 GLU THR PHE ALA PRO ASP ALA VAL VAL GLU ASP GLU GLY SEQRES 4 B 109 ALA ARG HIS GLN GLY VAL VAL ALA ILE LEU ARG TRP TRP SEQRES 5 B 109 VAL ALA ALA LYS LYS ALA ALA SER TYR VAL ALA GLU PRO SEQRES 6 B 109 LEU GLU SER THR VAL ASP GLY ASP LYS ALA LEU VAL ARG SEQRES 7 B 109 ALA LYS VAL SER GLY ARG PHE PRO GLY SER PRO VAL THR SEQRES 8 B 109 LEU THR TYR SER PHE THR ILE LYS ASP GLY ARG ILE ALA SEQRES 9 B 109 ARG LEU GLU ILE GLN MODRES 4U13 MSE A 1 MET MODIFIED RESIDUE MODRES 4U13 MSE A 9 MET MODIFIED RESIDUE MODRES 4U13 MSE B 1 MET MODIFIED RESIDUE MODRES 4U13 MSE B 9 MET MODIFIED RESIDUE HET MSE A 1 8 HET MSE A 9 8 HET MSE B 1 8 HET MSE B 9 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 4(C5 H11 N O2 SE) FORMUL 3 HOH *21(H2 O) HELIX 1 AA1 GLN A -1 LEU A 3 5 5 HELIX 2 AA2 PRO A 4 ASN A 17 1 14 HELIX 3 AA3 ASP A 18 GLU A 24 1 7 HELIX 4 AA4 GLY A 41 SER A 57 1 17 HELIX 5 AA5 GLN B -1 LEU B 3 5 5 HELIX 6 AA6 PRO B 4 ASN B 17 1 14 HELIX 7 AA7 ASP B 18 GLU B 24 1 7 HELIX 8 AA8 GLY B 41 SER B 57 1 17 SHEET 1 AA1 6 ALA A 37 GLN A 40 0 SHEET 2 AA1 6 PHE A 26 ASP A 34 -1 N VAL A 32 O HIS A 39 SHEET 3 AA1 6 ARG A 99 GLN A 106 1 O ILE A 100 N ALA A 27 SHEET 4 AA1 6 VAL A 87 LYS A 96 -1 N THR A 94 O ALA A 101 SHEET 5 AA1 6 LYS A 71 SER A 79 -1 N VAL A 74 O TYR A 91 SHEET 6 AA1 6 VAL A 59 ASP A 68 -1 N LEU A 63 O ARG A 75 SHEET 1 AA2 6 ALA B 37 GLN B 40 0 SHEET 2 AA2 6 PHE B 26 ASP B 34 -1 N VAL B 32 O HIS B 39 SHEET 3 AA2 6 ARG B 99 GLN B 106 1 O ILE B 100 N ALA B 27 SHEET 4 AA2 6 VAL B 87 LYS B 96 -1 N THR B 94 O ALA B 101 SHEET 5 AA2 6 LYS B 71 SER B 79 -1 N VAL B 74 O TYR B 91 SHEET 6 AA2 6 VAL B 59 ASP B 68 -1 N LEU B 63 O ARG B 75 SSBOND 1 CYS A 16 CYS B 16 1555 1555 2.14 LINK C SER A 0 N MSE A 1 1555 1555 1.33 LINK C MSE A 1 N ASP A 2 1555 1555 1.34 LINK C ASN A 8 N MSE A 9 1555 1555 1.33 LINK C MSE A 9 N TYR A 10 1555 1555 1.34 LINK C SER B 0 N MSE B 1 1555 1555 1.33 LINK C MSE B 1 N ASP B 2 1555 1555 1.34 LINK C ASN B 8 N MSE B 9 1555 1555 1.32 LINK C MSE B 9 N TYR B 10 1555 1555 1.33 CISPEP 1 SER A 85 PRO A 86 0 0.12 CISPEP 2 SER B 85 PRO B 86 0 -2.01 CRYST1 47.764 42.295 62.287 90.00 111.83 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020936 0.000000 0.008388 0.00000 SCALE2 0.000000 0.023643 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017295 0.00000