PDB Short entry for 4WCG HEADER DNA BINDING PROTEIN 04-SEP-14 4WCG TITLE THE BINDING MODE OF CYPRINID HERPESVIRUS3 ORF112-ZALPHA TO Z-DNA COMPND MOL_ID: 1; COMPND 2 MOLECULE: ORF112; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: DNA (5'-D(P*CP*GP*CP*GP*CP*G)-3'); COMPND 7 CHAIN: C, D; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CYPRINID HERPESVIRUS 3; SOURCE 3 ORGANISM_TAXID: 180230; SOURCE 4 GENE: KHVJ122; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET28A; SOURCE 9 MOL_ID: 2; SOURCE 10 SYNTHETIC: YES; SOURCE 11 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 12 ORGANISM_TAXID: 32630 KEYWDS ZALPHA, Z-DNA, INNATE IMMUNITY, HERPES VIRUS, DNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR K.KUS,A.ATHANASIADIS REVDAT 4 10-JAN-24 4WCG 1 REMARK REVDAT 3 13-JAN-16 4WCG 1 JRNL REVDAT 2 25-NOV-15 4WCG 1 JRNL REVDAT 1 18-NOV-15 4WCG 0 JRNL AUTH K.KUS,K.RAKUS,M.BOUTIER,T.TSIGKRI,L.GABRIEL, JRNL AUTH 2 A.VANDERPLASSCHEN,A.ATHANASIADIS JRNL TITL THE STRUCTURE OF THE CYPRINID HERPESVIRUS 3 ORF112-Z ALPHA JRNL TITL 2 Z-DNA COMPLEX REVEALS A MECHANISM OF NUCLEIC ACIDS JRNL TITL 3 RECOGNITION CONSERVED WITH E3L, A POXVIRUS INHIBITOR OF JRNL TITL 4 INTERFERON RESPONSE. JRNL REF J.BIOL.CHEM. V. 290 30713 2015 JRNL REFN ESSN 1083-351X JRNL PMID 26559969 JRNL DOI 10.1074/JBC.M115.679407 REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.4_1496) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.69 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 26960 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.179 REMARK 3 R VALUE (WORKING SET) : 0.178 REMARK 3 FREE R VALUE : 0.207 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.840 REMARK 3 FREE R VALUE TEST SET COUNT : 1306 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.7166 - 3.1199 0.99 3008 176 0.1666 0.1802 REMARK 3 2 3.1199 - 2.4764 0.99 2942 90 0.1920 0.2350 REMARK 3 3 2.4764 - 2.1634 1.00 2842 153 0.1747 0.2226 REMARK 3 4 2.1634 - 1.9656 1.00 2881 127 0.1792 0.2375 REMARK 3 5 1.9656 - 1.8247 1.00 2811 159 0.1745 0.1989 REMARK 3 6 1.8247 - 1.7171 1.00 2789 148 0.1711 0.2280 REMARK 3 7 1.7171 - 1.6311 1.00 2812 161 0.1803 0.2110 REMARK 3 8 1.6311 - 1.5601 1.00 2786 152 0.2187 0.3049 REMARK 3 9 1.5601 - 1.5000 1.00 2783 140 0.2365 0.2999 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.150 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.440 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 22.53 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.59 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 1338 REMARK 3 ANGLE : 1.050 1856 REMARK 3 CHIRALITY : 0.055 195 REMARK 3 PLANARITY : 0.005 198 REMARK 3 DIHEDRAL : 17.224 516 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 11 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 217 THROUGH 237 ) REMARK 3 ORIGIN FOR THE GROUP (A): -24.4898 14.8638 -18.9223 REMARK 3 T TENSOR REMARK 3 T11: 0.2158 T22: 0.1878 REMARK 3 T33: 0.1512 T12: 0.0573 REMARK 3 T13: -0.0134 T23: 0.0136 REMARK 3 L TENSOR REMARK 3 L11: 8.4638 L22: 6.9809 REMARK 3 L33: 5.6105 L12: 4.1631 REMARK 3 L13: -1.4505 L23: -1.9753 REMARK 3 S TENSOR REMARK 3 S11: -0.1208 S12: 0.3692 S13: 0.3036 REMARK 3 S21: -0.2385 S22: 0.1528 S23: 0.2212 REMARK 3 S31: 0.0714 S32: -0.2639 S33: -0.1042 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 238 THROUGH 262 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.9988 14.7418 -11.8960 REMARK 3 T TENSOR REMARK 3 T11: 0.1765 T22: 0.1473 REMARK 3 T33: 0.1385 T12: 0.0265 REMARK 3 T13: 0.0018 T23: 0.0087 REMARK 3 L TENSOR REMARK 3 L11: 3.8464 L22: 5.3874 REMARK 3 L33: 7.1802 L12: -2.2546 REMARK 3 L13: -0.4710 L23: 0.2113 REMARK 3 S TENSOR REMARK 3 S11: 0.0282 S12: -0.0895 S13: 0.2005 REMARK 3 S21: 0.2092 S22: 0.0171 S23: 0.1979 REMARK 3 S31: -0.3202 S32: -0.1596 S33: -0.0266 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 263 THROUGH 277 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.7676 10.3016 -18.1874 REMARK 3 T TENSOR REMARK 3 T11: 0.1938 T22: 0.2579 REMARK 3 T33: 0.2008 T12: 0.0412 REMARK 3 T13: -0.0045 T23: -0.0078 REMARK 3 L TENSOR REMARK 3 L11: 5.5513 L22: 7.8975 REMARK 3 L33: 7.2322 L12: 3.5673 REMARK 3 L13: 0.4574 L23: 0.1392 REMARK 3 S TENSOR REMARK 3 S11: 0.0891 S12: 0.3240 S13: -0.3346 REMARK 3 S21: 0.0204 S22: -0.0337 S23: -0.6734 REMARK 3 S31: 0.1142 S32: 0.8176 S33: -0.0661 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 5 THROUGH 9 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.0383 13.2387 -3.6222 REMARK 3 T TENSOR REMARK 3 T11: 0.2551 T22: 0.1611 REMARK 3 T33: 0.1479 T12: 0.0113 REMARK 3 T13: 0.0092 T23: -0.0114 REMARK 3 L TENSOR REMARK 3 L11: 1.5647 L22: 5.4888 REMARK 3 L33: 6.1650 L12: -0.4147 REMARK 3 L13: 2.4142 L23: 2.2166 REMARK 3 S TENSOR REMARK 3 S11: 0.0401 S12: 0.0175 S13: -0.0576 REMARK 3 S21: -0.1432 S22: 0.0551 S23: -0.0163 REMARK 3 S31: 0.0991 S32: 0.2582 S33: -0.0878 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 10 THROUGH 10 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.0456 7.1226 0.3383 REMARK 3 T TENSOR REMARK 3 T11: 0.4818 T22: 0.2917 REMARK 3 T33: 0.4008 T12: 0.0430 REMARK 3 T13: 0.0989 T23: -0.0614 REMARK 3 L TENSOR REMARK 3 L11: 4.5821 L22: 3.0849 REMARK 3 L33: 0.9050 L12: 0.8644 REMARK 3 L13: -1.9562 L23: 0.0835 REMARK 3 S TENSOR REMARK 3 S11: -0.0631 S12: -1.3528 S13: 0.1293 REMARK 3 S21: 0.4077 S22: 0.3862 S23: 1.2230 REMARK 3 S31: -1.2694 S32: 0.0924 S33: -0.2342 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 217 THROUGH 232 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.6987 -6.8420 -11.6158 REMARK 3 T TENSOR REMARK 3 T11: 0.2538 T22: 0.2641 REMARK 3 T33: 0.2695 T12: 0.0874 REMARK 3 T13: 0.0052 T23: 0.0590 REMARK 3 L TENSOR REMARK 3 L11: 6.6946 L22: 8.0908 REMARK 3 L33: 8.5947 L12: 1.5542 REMARK 3 L13: -1.1207 L23: 3.8244 REMARK 3 S TENSOR REMARK 3 S11: 0.0559 S12: -0.5310 S13: -0.2630 REMARK 3 S21: 0.0321 S22: -0.2162 S23: -0.7755 REMARK 3 S31: 0.3544 S32: 0.7774 S33: 0.1252 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 233 THROUGH 248 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.3523 -13.4562 -9.1721 REMARK 3 T TENSOR REMARK 3 T11: 0.3906 T22: 0.2125 REMARK 3 T33: 0.3277 T12: 0.0631 REMARK 3 T13: 0.0431 T23: -0.0014 REMARK 3 L TENSOR REMARK 3 L11: 5.8645 L22: 3.3384 REMARK 3 L33: 2.8210 L12: -1.1399 REMARK 3 L13: 3.8563 L23: -1.0721 REMARK 3 S TENSOR REMARK 3 S11: 0.0275 S12: -0.0010 S13: -0.4060 REMARK 3 S21: 0.0833 S22: -0.0684 S23: -0.1114 REMARK 3 S31: 0.9727 S32: 0.2285 S33: 0.0046 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 249 THROUGH 266 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.8280 -1.6401 -10.2857 REMARK 3 T TENSOR REMARK 3 T11: 0.1884 T22: 0.1440 REMARK 3 T33: 0.1859 T12: 0.0334 REMARK 3 T13: -0.0046 T23: -0.0232 REMARK 3 L TENSOR REMARK 3 L11: 5.0652 L22: 5.5502 REMARK 3 L33: 9.3083 L12: -1.3196 REMARK 3 L13: -0.8611 L23: -1.1255 REMARK 3 S TENSOR REMARK 3 S11: -0.0724 S12: -0.2476 S13: 0.1605 REMARK 3 S21: 0.0853 S22: 0.0271 S23: -0.3196 REMARK 3 S31: -0.0267 S32: 0.3970 S33: 0.0051 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 267 THROUGH 277 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.3703 -5.9813 -16.8257 REMARK 3 T TENSOR REMARK 3 T11: 0.2301 T22: 0.2098 REMARK 3 T33: 0.1814 T12: 0.0259 REMARK 3 T13: -0.0065 T23: -0.0275 REMARK 3 L TENSOR REMARK 3 L11: 3.9080 L22: 5.6767 REMARK 3 L33: 6.1127 L12: 0.3442 REMARK 3 L13: 0.5084 L23: 0.0552 REMARK 3 S TENSOR REMARK 3 S11: 0.0726 S12: 0.0437 S13: 0.3217 REMARK 3 S21: -0.1409 S22: -0.0133 S23: 0.2778 REMARK 3 S31: 0.1444 S32: -0.5454 S33: 0.0142 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 5 THROUGH 9 ) REMARK 3 ORIGIN FOR THE GROUP (A): -23.1437 -3.2643 -3.4086 REMARK 3 T TENSOR REMARK 3 T11: 0.1886 T22: 0.1352 REMARK 3 T33: 0.1249 T12: 0.0071 REMARK 3 T13: 0.0123 T23: 0.0136 REMARK 3 L TENSOR REMARK 3 L11: 5.6845 L22: 5.7669 REMARK 3 L33: 5.4283 L12: -1.3502 REMARK 3 L13: -3.3519 L23: -1.7051 REMARK 3 S TENSOR REMARK 3 S11: 0.0952 S12: 0.0534 S13: 0.2683 REMARK 3 S21: 0.0296 S22: -0.0670 S23: -0.0589 REMARK 3 S31: -0.0225 S32: -0.0814 S33: -0.0340 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 10 THROUGH 10 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.9385 4.1607 2.6940 REMARK 3 T TENSOR REMARK 3 T11: 0.4569 T22: 0.2318 REMARK 3 T33: 0.3231 T12: 0.0207 REMARK 3 T13: -0.0949 T23: -0.0311 REMARK 3 L TENSOR REMARK 3 L11: 5.5358 L22: 6.5060 REMARK 3 L33: 4.4269 L12: -5.2020 REMARK 3 L13: 4.5938 L23: -4.4820 REMARK 3 S TENSOR REMARK 3 S11: -0.1923 S12: -1.1194 S13: 0.4793 REMARK 3 S21: 0.5029 S22: 0.2624 S23: -1.0526 REMARK 3 S31: 0.9940 S32: -0.5038 S33: -0.1053 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4WCG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 05-SEP-14. REMARK 100 THE DEPOSITION ID IS D_1000203493. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-APR-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.976 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS, XSCALE REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.21, XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27020 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 46.694 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 7.100 REMARK 200 R MERGE (I) : 0.03700 REMARK 200 R SYM (I) : 0.03700 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 22.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.58 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 7.30 REMARK 200 R MERGE FOR SHELL (I) : 0.67100 REMARK 200 R SYM FOR SHELL (I) : 0.67100 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.5.5 REMARK 200 STARTING MODEL: 4HOB REMARK 200 REMARK 200 REMARK: HEXAGONAL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.52 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.9 M LITHIUM SULFATE , 0.1 M HEPES PH REMARK 280 7.6, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 93.38800 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 46.69400 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 46.69400 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 93.38800 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3330 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8350 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -70.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 181 REMARK 465 SER A 182 REMARK 465 HIS A 183 REMARK 465 MET A 184 REMARK 465 ALA A 185 REMARK 465 SER A 186 REMARK 465 MET A 187 REMARK 465 SER A 188 REMARK 465 VAL A 189 REMARK 465 ASP A 190 REMARK 465 ASP A 191 REMARK 465 LEU A 192 REMARK 465 ASP A 193 REMARK 465 GLY A 194 REMARK 465 LEU A 195 REMARK 465 ASP A 196 REMARK 465 GLY A 197 REMARK 465 ALA A 198 REMARK 465 GLU A 199 REMARK 465 LYS A 200 REMARK 465 VAL A 201 REMARK 465 LYS A 202 REMARK 465 THR A 203 REMARK 465 THR A 204 REMARK 465 ALA A 205 REMARK 465 SER A 206 REMARK 465 GLU A 207 REMARK 465 ALA A 208 REMARK 465 ILE A 209 REMARK 465 PRO A 210 REMARK 465 ALA A 211 REMARK 465 LEU A 212 REMARK 465 PRO A 213 REMARK 465 ARG A 214 REMARK 465 LEU A 215 REMARK 465 ASN A 216 REMARK 465 ALA A 278 REMARK 465 GLY B 181 REMARK 465 SER B 182 REMARK 465 HIS B 183 REMARK 465 MET B 184 REMARK 465 ALA B 185 REMARK 465 SER B 186 REMARK 465 MET B 187 REMARK 465 SER B 188 REMARK 465 VAL B 189 REMARK 465 ASP B 190 REMARK 465 ASP B 191 REMARK 465 LEU B 192 REMARK 465 ASP B 193 REMARK 465 GLY B 194 REMARK 465 LEU B 195 REMARK 465 ASP B 196 REMARK 465 GLY B 197 REMARK 465 ALA B 198 REMARK 465 GLU B 199 REMARK 465 LYS B 200 REMARK 465 VAL B 201 REMARK 465 LYS B 202 REMARK 465 THR B 203 REMARK 465 THR B 204 REMARK 465 ALA B 205 REMARK 465 SER B 206 REMARK 465 GLU B 207 REMARK 465 ALA B 208 REMARK 465 ILE B 209 REMARK 465 PRO B 210 REMARK 465 ALA B 211 REMARK 465 LEU B 212 REMARK 465 PRO B 213 REMARK 465 ARG B 214 REMARK 465 LEU B 215 REMARK 465 ASN B 216 REMARK 465 ALA B 278 REMARK 465 DT C 0 REMARK 465 DC C 7 REMARK 465 DG C 8 REMARK 465 DC C 9 REMARK 465 DG C 10 REMARK 465 DC C 11 REMARK 465 DG C 12 REMARK 465 DC C 13 REMARK 465 DG C 14 REMARK 465 DC C 15 REMARK 465 DG C 16 REMARK 465 DC C 17 REMARK 465 DG C 18 REMARK 465 DT D 0 REMARK 465 DC D 7 REMARK 465 DG D 8 REMARK 465 DC D 9 REMARK 465 DG D 10 REMARK 465 DC D 11 REMARK 465 DG D 12 REMARK 465 DC D 13 REMARK 465 DG D 14 REMARK 465 DC D 15 REMARK 465 DG D 16 REMARK 465 DC D 17 REMARK 465 DG D 18 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 233 CG CD CE NZ REMARK 470 GLN A 270 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 P DC C 1 O3' DG C 6 4565 1.32 REMARK 500 P DC D 1 O3' DG D 6 4455 1.48 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 302 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4HOB RELATED DB: PDB REMARK 900 4HOB IS A SHORTER CONSTRUCT VERSION WITHOUT NUCLEIC ACID DBREF 4WCG A 187 278 UNP A4FTK7 A4FTK7_9VIRU 187 278 DBREF 4WCG B 187 278 UNP A4FTK7 A4FTK7_9VIRU 187 278 DBREF 4WCG C 0 18 PDB 4WCG 4WCG 0 18 DBREF 4WCG D 0 18 PDB 4WCG 4WCG 0 18 SEQADV 4WCG GLY A 181 UNP A4FTK7 EXPRESSION TAG SEQADV 4WCG SER A 182 UNP A4FTK7 EXPRESSION TAG SEQADV 4WCG HIS A 183 UNP A4FTK7 EXPRESSION TAG SEQADV 4WCG MET A 184 UNP A4FTK7 EXPRESSION TAG SEQADV 4WCG ALA A 185 UNP A4FTK7 EXPRESSION TAG SEQADV 4WCG SER A 186 UNP A4FTK7 EXPRESSION TAG SEQADV 4WCG GLY B 181 UNP A4FTK7 EXPRESSION TAG SEQADV 4WCG SER B 182 UNP A4FTK7 EXPRESSION TAG SEQADV 4WCG HIS B 183 UNP A4FTK7 EXPRESSION TAG SEQADV 4WCG MET B 184 UNP A4FTK7 EXPRESSION TAG SEQADV 4WCG ALA B 185 UNP A4FTK7 EXPRESSION TAG SEQADV 4WCG SER B 186 UNP A4FTK7 EXPRESSION TAG SEQRES 1 A 98 GLY SER HIS MET ALA SER MET SER VAL ASP ASP LEU ASP SEQRES 2 A 98 GLY LEU ASP GLY ALA GLU LYS VAL LYS THR THR ALA SER SEQRES 3 A 98 GLU ALA ILE PRO ALA LEU PRO ARG LEU ASN PRO ILE SER SEQRES 4 A 98 GLU GLU MET ASN LEU LYS ILE LEU ALA TYR LEU GLY THR SEQRES 5 A 98 LYS GLN GLY ALA LYS ALA VAL HIS ILE ALA GLN SER LEU SEQRES 6 A 98 GLY ALA GLN ARG SER GLU VAL ASN ARG HIS LEU TYR ARG SEQRES 7 A 98 MET SER GLU ASP GLY ARG VAL ARG LYS HIS PRO GLN HIS SEQRES 8 A 98 PRO VAL TRP TYR LEU PRO ALA SEQRES 1 B 98 GLY SER HIS MET ALA SER MET SER VAL ASP ASP LEU ASP SEQRES 2 B 98 GLY LEU ASP GLY ALA GLU LYS VAL LYS THR THR ALA SER SEQRES 3 B 98 GLU ALA ILE PRO ALA LEU PRO ARG LEU ASN PRO ILE SER SEQRES 4 B 98 GLU GLU MET ASN LEU LYS ILE LEU ALA TYR LEU GLY THR SEQRES 5 B 98 LYS GLN GLY ALA LYS ALA VAL HIS ILE ALA GLN SER LEU SEQRES 6 B 98 GLY ALA GLN ARG SER GLU VAL ASN ARG HIS LEU TYR ARG SEQRES 7 B 98 MET SER GLU ASP GLY ARG VAL ARG LYS HIS PRO GLN HIS SEQRES 8 B 98 PRO VAL TRP TYR LEU PRO ALA SEQRES 1 C 19 DT DC DG DC DG DC DG DC DG DC DG DC DG SEQRES 2 C 19 DC DG DC DG DC DG SEQRES 1 D 19 DT DC DG DC DG DC DG DC DG DC DG DC DG SEQRES 2 D 19 DC DG DC DG DC DG HET SO4 A 301 5 HET SO4 A 302 5 HET SO4 B 301 5 HET SO4 B 302 5 HETNAM SO4 SULFATE ION FORMUL 5 SO4 4(O4 S 2-) FORMUL 9 HOH *120(H2 O) HELIX 1 AA1 SER A 219 LYS A 233 1 15 HELIX 2 AA2 LYS A 237 GLY A 246 1 10 HELIX 3 AA3 GLN A 248 ASP A 262 1 15 HELIX 4 AA4 SER B 219 GLY B 231 1 13 HELIX 5 AA5 ALA B 238 GLY B 246 1 9 HELIX 6 AA6 GLN B 248 ASP B 262 1 15 SHEET 1 AA1 2 ARG A 266 LYS A 267 0 SHEET 2 AA1 2 TRP A 274 TYR A 275 -1 O TYR A 275 N ARG A 266 SHEET 1 AA2 3 ALA B 236 LYS B 237 0 SHEET 2 AA2 3 VAL B 273 TYR B 275 -1 O TRP B 274 N ALA B 236 SHEET 3 AA2 3 ARG B 266 LYS B 267 -1 N ARG B 266 O TYR B 275 SITE 1 AC1 7 GLY A 263 ARG A 266 HOH A 421 HOH A 440 SITE 2 AC1 7 GLY B 263 ARG B 266 HOH B 420 SITE 1 AC2 3 SER A 219 GLU A 220 GLU A 221 SITE 1 AC3 3 GLN A 248 ARG B 249 HOH B 402 SITE 1 AC4 3 SER B 219 GLU B 220 GLU B 221 CRYST1 44.821 44.821 140.082 90.00 90.00 120.00 P 32 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022311 0.012881 0.000000 0.00000 SCALE2 0.000000 0.025762 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007139 0.00000