PDB Short entry for 4WNE HEADER SIGNALING PROTEIN/PROTEIN BINDING 11-OCT-14 4WNE TITLE CRYSTAL STRUCTURE OF THE TPR DOMAIN OF LGN IN COMPLEX WITH TITLE 2 FRMPD4/PRESO1 AT 2.0 ANGSTROM RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: G-PROTEIN-SIGNALING MODULATOR 2; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: N-TERMINAL TPR DOMAIN, UNP RESIDUES 20-421; COMPND 5 SYNONYM: MOSAIC PROTEIN LGN; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: PEPTIDE FROM FERM AND PDZ DOMAIN-CONTAINING PROTEIN 4; COMPND 9 CHAIN: B; COMPND 10 FRAGMENT: FRMPD4-S, UNP RESIDUES 987-1011; COMPND 11 SYNONYM: PDZ DOMAIN-CONTAINING PROTEIN 10,PSD-95-INTERACTING COMPND 12 REGULATOR OF SPINE MORPHOGENESIS,PRESO; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: GPSM2, LGN; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PRSFDUET-1; SOURCE 10 MOL_ID: 2; SOURCE 11 SYNTHETIC: YES; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_COMMON: HUMAN; SOURCE 14 ORGANISM_TAXID: 9606 KEYWDS TETRATRICOPEPTIDE REPEAT, TPR, CELL POLARITY, CYTOPLASM AND CELL KEYWDS 2 CORTEX, SIGNALING PROTEIN-PROTEIN BINDING COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR H.TAKAYANAGI,S.YUZAWA,H.SUMIMOTO REVDAT 3 08-NOV-23 4WNE 1 REMARK REVDAT 2 05-FEB-20 4WNE 1 REMARK REVDAT 1 16-SEP-15 4WNE 0 JRNL AUTH H.TAKAYANAGI,S.YUZAWA,H.SUMIMOTO JRNL TITL STRUCTURAL BASIS FOR THE RECOGNITION OF THE SCAFFOLD PROTEIN JRNL TITL 2 FRMPD4/PRESO1 BY THE TPR DOMAIN OF THE ADAPTOR PROTEIN LGN JRNL REF ACTA CRYSTALLOGR.,SECT.F V. 71 175 2015 JRNL REFN ESSN 2053-230X JRNL PMID 25664792 JRNL DOI 10.1107/S2053230X14028143 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.78 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 28795 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.212 REMARK 3 R VALUE (WORKING SET) : 0.210 REMARK 3 FREE R VALUE : 0.238 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1533 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2092 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.14 REMARK 3 BIN R VALUE (WORKING SET) : 0.2770 REMARK 3 BIN FREE R VALUE SET COUNT : 98 REMARK 3 BIN FREE R VALUE : 0.3270 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2616 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 106 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 50.97 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.41000 REMARK 3 B22 (A**2) : 1.41000 REMARK 3 B33 (A**2) : -4.58000 REMARK 3 B12 (A**2) : 1.41000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.168 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.149 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.110 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.981 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.950 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.935 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2668 ; 0.009 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2412 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3606 ; 1.029 ; 1.945 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5511 ; 0.717 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 344 ; 4.607 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 131 ;34.285 ;24.351 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 418 ;14.571 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 14 ;14.873 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 394 ; 0.059 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3143 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 651 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 4WNE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 24-OCT-14. REMARK 100 THE DEPOSITION ID IS D_1000204104. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-JUN-13 REMARK 200 TEMPERATURE (KELVIN) : 95 REMARK 200 PH : 7.25 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-1A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.1000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30371 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 9.400 REMARK 200 R MERGE (I) : 0.07900 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 9.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.03 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.1 REMARK 200 DATA REDUNDANCY IN SHELL : 9.60 REMARK 200 R MERGE FOR SHELL (I) : 0.88100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.059 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP 11.0.05 REMARK 200 STARTING MODEL: 3SF4 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.09 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.24 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M BISTRISPROPANE (PH 7.25), 0.2 M REMARK 280 SODIUM BROMIDE, 20% PEG 3350, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 58.92767 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 117.85533 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 88.39150 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 147.31917 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 29.46383 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 58.92767 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 117.85533 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 147.31917 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 88.39150 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 29.46383 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2820 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15840 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 9 REMARK 465 PRO A 10 REMARK 465 GLY A 11 REMARK 465 GLY A 153 REMARK 465 CYS A 154 REMARK 465 PRO A 155 REMARK 465 GLY A 156 REMARK 465 PRO A 157 REMARK 465 GLN A 158 REMARK 465 ASP A 159 REMARK 465 VAL A 160 REMARK 465 GLY A 161 REMARK 465 GLU A 162 REMARK 465 VAL A 348 REMARK 465 GLY A 349 REMARK 465 ASP A 350 REMARK 465 LYS A 351 REMARK 465 SER A 352 REMARK 465 GLY A 353 REMARK 465 GLU A 354 REMARK 465 LEU A 355 REMARK 465 THR A 356 REMARK 465 ALA A 357 REMARK 465 ARG A 358 REMARK 465 LEU A 359 REMARK 465 ASN A 360 REMARK 465 LEU A 361 REMARK 465 SER A 362 REMARK 465 ASP A 363 REMARK 465 LEU A 364 REMARK 465 GLN A 365 REMARK 465 MET A 366 REMARK 465 VAL A 367 REMARK 465 LEU A 368 REMARK 465 GLY A 369 REMARK 465 LEU A 370 REMARK 465 SER A 371 REMARK 465 TYR A 372 REMARK 465 SER A 373 REMARK 465 THR A 374 REMARK 465 ASN A 375 REMARK 465 ASN A 376 REMARK 465 SER A 377 REMARK 465 ILE A 378 REMARK 465 MET A 379 REMARK 465 SER A 380 REMARK 465 GLU A 381 REMARK 465 ASN A 382 REMARK 465 THR A 383 REMARK 465 GLU A 384 REMARK 465 ILE A 385 REMARK 465 ASP A 386 REMARK 465 SER A 387 REMARK 465 SER A 388 REMARK 465 LEU A 389 REMARK 465 ASN A 390 REMARK 465 GLY A 391 REMARK 465 VAL A 392 REMARK 465 ARG A 393 REMARK 465 PRO A 394 REMARK 465 LYS A 395 REMARK 465 LEU A 396 REMARK 465 GLY A 397 REMARK 465 ARG A 398 REMARK 465 ARG A 399 REMARK 465 HIS A 400 REMARK 465 SER A 401 REMARK 465 MET A 402 REMARK 465 GLU A 403 REMARK 465 ASN A 404 REMARK 465 MET A 405 REMARK 465 GLU A 406 REMARK 465 LEU A 407 REMARK 465 MET A 408 REMARK 465 LYS A 409 REMARK 465 LEU A 410 REMARK 465 THR A 411 REMARK 465 PRO A 412 REMARK 465 GLU A 413 REMARK 465 LYS A 414 REMARK 465 LYS B 987 REMARK 465 GLN B 988 REMARK 465 LEU B 989 REMARK 465 LEU B 990 REMARK 465 HIS B 991 REMARK 465 SER B 992 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 34 CD NE CZ NH1 NH2 REMARK 470 GLU A 252 CG CD OE1 OE2 REMARK 470 LYS A 269 CG CD CE NZ REMARK 470 GLN A 276 CG CD OE1 NE2 REMARK 470 GLU A 292 CG CD OE1 OE2 REMARK 470 LYS A 293 CG CD CE NZ REMARK 470 LEU A 299 CD1 CD2 REMARK 470 LYS A 300 CE NZ REMARK 470 LEU A 302 CD1 CD2 REMARK 470 ILE A 304 CG1 CG2 CD1 REMARK 470 LEU A 308 CG CD1 CD2 REMARK 470 ASN A 309 CG OD1 ND2 REMARK 470 ASP A 310 CG OD1 OD2 REMARK 470 ARG A 311 CG CD NE CZ NH1 NH2 REMARK 470 ILE A 312 CG1 CG2 CD1 REMARK 470 GLU A 314 CG CD OE1 OE2 REMARK 470 ARG A 316 CZ NH1 NH2 REMARK 470 CYS A 318 SG REMARK 470 THR A 326 OG1 CG2 REMARK 470 HIS A 331 ND1 CD2 CE1 NE2 REMARK 470 ASP A 332 CG OD1 OD2 REMARK 470 MET A 335 CG SD CE REMARK 470 GLU A 339 CG CD OE1 OE2 REMARK 470 LYS A 340 CG CD CE NZ REMARK 470 LEU A 342 CG CD1 CD2 REMARK 470 ILE A 344 CG1 CG2 CD1 REMARK 470 ARG A 346 CD NE CZ NH1 NH2 REMARK 470 GLU A 347 CG CD OE1 OE2 REMARK 470 ASP B 993 CG OD1 OD2 REMARK 470 HIS B 994 CG ND1 CD2 CE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 32 75.22 -111.91 REMARK 500 THR A 48 148.12 -170.93 REMARK 500 GLU A 250 76.29 -102.81 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3SF4 RELATED DB: PDB REMARK 900 3SF4 CONTAINS THE SAME PROTEIN COMPLEXED WITH MINSC. REMARK 900 RELATED ID: 4WND RELATED DB: PDB REMARK 900 RELATED ID: 4WNF RELATED DB: PDB REMARK 900 RELATED ID: 4WNG RELATED DB: PDB DBREF 4WNE A 13 414 UNP P81274 GPSM2_HUMAN 20 421 DBREF 4WNE B 987 1011 UNP Q14CM0 FRPD4_HUMAN 987 1011 SEQADV 4WNE GLY A 9 UNP P81274 EXPRESSION TAG SEQADV 4WNE PRO A 10 UNP P81274 EXPRESSION TAG SEQADV 4WNE GLY A 11 UNP P81274 EXPRESSION TAG SEQADV 4WNE SER A 12 UNP P81274 EXPRESSION TAG SEQRES 1 A 406 GLY PRO GLY SER MET GLU ALA SER CYS LEU GLU LEU ALA SEQRES 2 A 406 LEU GLU GLY GLU ARG LEU CYS LYS SER GLY ASP CYS ARG SEQRES 3 A 406 ALA GLY VAL SER PHE PHE GLU ALA ALA VAL GLN VAL GLY SEQRES 4 A 406 THR GLU ASP LEU LYS THR LEU SER ALA ILE TYR SER GLN SEQRES 5 A 406 LEU GLY ASN ALA TYR PHE TYR LEU HIS ASP TYR ALA LYS SEQRES 6 A 406 ALA LEU GLU TYR HIS HIS HIS ASP LEU THR LEU ALA ARG SEQRES 7 A 406 THR ILE GLY ASP GLN LEU GLY GLU ALA LYS ALA SER GLY SEQRES 8 A 406 ASN LEU GLY ASN THR LEU LYS VAL LEU GLY ASN PHE ASP SEQRES 9 A 406 GLU ALA ILE VAL CYS CYS GLN ARG HIS LEU ASP ILE SER SEQRES 10 A 406 ARG GLU LEU ASN ASP LYS VAL GLY GLU ALA ARG ALA LEU SEQRES 11 A 406 TYR ASN LEU GLY ASN VAL TYR HIS ALA LYS GLY LYS SER SEQRES 12 A 406 PHE GLY CYS PRO GLY PRO GLN ASP VAL GLY GLU PHE PRO SEQRES 13 A 406 GLU GLU VAL ARG ASP ALA LEU GLN ALA ALA VAL ASP PHE SEQRES 14 A 406 TYR GLU GLU ASN LEU SER LEU VAL THR ALA LEU GLY ASP SEQRES 15 A 406 ARG ALA ALA GLN GLY ARG ALA PHE GLY ASN LEU GLY ASN SEQRES 16 A 406 THR HIS TYR LEU LEU GLY ASN PHE ARG ASP ALA VAL ILE SEQRES 17 A 406 ALA HIS GLU GLN ARG LEU LEU ILE ALA LYS GLU PHE GLY SEQRES 18 A 406 ASP LYS ALA ALA GLU ARG ARG ALA TYR SER ASN LEU GLY SEQRES 19 A 406 ASN ALA TYR ILE PHE LEU GLY GLU PHE GLU THR ALA SER SEQRES 20 A 406 GLU TYR TYR LYS LYS THR LEU LEU LEU ALA ARG GLN LEU SEQRES 21 A 406 LYS ASP ARG ALA VAL GLU ALA GLN SER CYS TYR SER LEU SEQRES 22 A 406 GLY ASN THR TYR THR LEU LEU GLN ASP TYR GLU LYS ALA SEQRES 23 A 406 ILE ASP TYR HIS LEU LYS HIS LEU ALA ILE ALA GLN GLU SEQRES 24 A 406 LEU ASN ASP ARG ILE GLY GLU GLY ARG ALA CYS TRP SER SEQRES 25 A 406 LEU GLY ASN ALA TYR THR ALA LEU GLY ASN HIS ASP GLN SEQRES 26 A 406 ALA MET HIS PHE ALA GLU LYS HIS LEU GLU ILE SER ARG SEQRES 27 A 406 GLU VAL GLY ASP LYS SER GLY GLU LEU THR ALA ARG LEU SEQRES 28 A 406 ASN LEU SER ASP LEU GLN MET VAL LEU GLY LEU SER TYR SEQRES 29 A 406 SER THR ASN ASN SER ILE MET SER GLU ASN THR GLU ILE SEQRES 30 A 406 ASP SER SER LEU ASN GLY VAL ARG PRO LYS LEU GLY ARG SEQRES 31 A 406 ARG HIS SER MET GLU ASN MET GLU LEU MET LYS LEU THR SEQRES 32 A 406 PRO GLU LYS SEQRES 1 B 25 LYS GLN LEU LEU HIS SER ASP HIS MET GLU MET GLU PRO SEQRES 2 B 25 GLU THR MET GLU THR LYS SER VAL THR ASP TYR PHE FORMUL 3 HOH *106(H2 O) HELIX 1 AA1 SER A 12 SER A 30 1 19 HELIX 2 AA2 ASP A 32 GLY A 47 1 16 HELIX 3 AA3 ASP A 50 LEU A 68 1 19 HELIX 4 AA4 ASP A 70 ILE A 88 1 19 HELIX 5 AA5 ASP A 90 LEU A 108 1 19 HELIX 6 AA6 ASN A 110 LEU A 128 1 19 HELIX 7 AA7 ASP A 130 PHE A 152 1 23 HELIX 8 AA8 PRO A 164 GLY A 189 1 26 HELIX 9 AA9 ASP A 190 LEU A 208 1 19 HELIX 10 AB1 ASN A 210 GLY A 229 1 20 HELIX 11 AB2 ASP A 230 LEU A 248 1 19 HELIX 12 AB3 GLU A 250 LYS A 269 1 20 HELIX 13 AB4 ASP A 270 GLN A 289 1 20 HELIX 14 AB5 ASP A 290 LEU A 308 1 19 HELIX 15 AB6 ASP A 310 GLY A 329 1 20 HELIX 16 AB7 ASN A 330 GLU A 347 1 18 HELIX 17 AB8 SER B 1006 PHE B 1011 5 6 CRYST1 91.784 91.784 176.783 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010895 0.006290 0.000000 0.00000 SCALE2 0.000000 0.012581 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005657 0.00000