PDB Short entry for 4WYK HEADER TRANSPORT PROTEIN 17-NOV-14 4WYK TITLE STRUCTURE OF THE LRR AND NTF2-LIKE DOMAINS OF NXF1 COMPLEXED WITH NXT1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: NUCLEAR RNA EXPORT FACTOR 1; COMPND 3 CHAIN: A, C; COMPND 4 FRAGMENT: UNP RESIDUES 96-555; COMPND 5 SYNONYM: TIP-ASSOCIATED PROTEIN,TIP-ASSOCIATING PROTEIN,MRNA EXPORT COMPND 6 FACTOR TAP; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: NTF2-RELATED EXPORT PROTEIN 1; COMPND 10 CHAIN: B, D; COMPND 11 FRAGMENT: UNP RESIDUES 2-140; COMPND 12 SYNONYM: PROTEIN P15; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: NXF1, TAP; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: NXT1; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NUCLEAR EXPORT, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.AIBARA,E.VALKOV,M.STEWART REVDAT 4 13-SEP-17 4WYK 1 REMARK REVDAT 3 25-FEB-15 4WYK 1 JRNL REVDAT 2 11-FEB-15 4WYK 1 JRNL REVDAT 1 04-FEB-15 4WYK 0 JRNL AUTH S.AIBARA,J.KATAHIRA,E.VALKOV,M.STEWART JRNL TITL THE PRINCIPAL MRNA NUCLEAR EXPORT FACTOR NXF1:NXT1 FORMS A JRNL TITL 2 SYMMETRIC BINDING PLATFORM THAT FACILITATES EXPORT OF JRNL TITL 3 RETROVIRAL CTE-RNA. JRNL REF NUCLEIC ACIDS RES. V. 43 1883 2015 JRNL REFN ESSN 1362-4962 JRNL PMID 25628361 JRNL DOI 10.1093/NAR/GKV032 REMARK 2 REMARK 2 RESOLUTION. 3.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.9_1692) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.41 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.970 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.3 REMARK 3 NUMBER OF REFLECTIONS : 19852 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.216 REMARK 3 R VALUE (WORKING SET) : 0.213 REMARK 3 FREE R VALUE : 0.266 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.110 REMARK 3 FREE R VALUE TEST SET COUNT : 1014 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.4157 - 6.4989 0.92 2661 139 0.1706 0.2109 REMARK 3 2 6.4989 - 5.1605 0.97 2806 153 0.2096 0.2497 REMARK 3 3 5.1605 - 4.5088 0.87 2517 141 0.1768 0.2419 REMARK 3 4 4.5088 - 4.0968 0.94 2692 147 0.1987 0.2582 REMARK 3 5 4.0968 - 3.8033 0.95 2716 165 0.2453 0.3034 REMARK 3 6 3.8033 - 3.5792 0.96 2785 142 0.2864 0.3396 REMARK 3 7 3.5792 - 3.4000 0.93 2661 127 0.3150 0.3949 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.520 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.920 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 7820 REMARK 3 ANGLE : 0.791 10579 REMARK 3 CHIRALITY : 0.031 1200 REMARK 3 PLANARITY : 0.003 1376 REMARK 3 DIHEDRAL : 13.357 2933 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4WYK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 19-NOV-14. REMARK 100 THE DEPOSITION ID IS D_1000204775. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-MAY-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.1 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.92 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19892 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.400 REMARK 200 RESOLUTION RANGE LOW (A) : 46.411 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.5 REMARK 200 DATA REDUNDANCY : 3.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 6.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.25 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.95 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 9 % PEG 6000, 1 M LICL, 0.1 M SODIUM REMARK 280 CITRATE BUFFER PH 5.1 SEE PUBLICATION FOR FULL DETAILS., VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 13990 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 44250 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -72.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 95 REMARK 465 VAL A 96 REMARK 465 ARG A 97 REMARK 465 ARG A 98 REMARK 465 ASP A 99 REMARK 465 ARG A 100 REMARK 465 ALA A 101 REMARK 465 PRO A 102 REMARK 465 PRO A 103 REMARK 465 GLU A 104 REMARK 465 ARG A 105 REMARK 465 GLY A 106 REMARK 465 GLY A 107 REMARK 465 ALA A 108 REMARK 465 GLY A 109 REMARK 465 THR A 110 REMARK 465 SER A 111 REMARK 465 GLN A 112 REMARK 465 ASP A 113 REMARK 465 GLY A 114 REMARK 465 THR A 115 REMARK 465 SER A 116 REMARK 465 LYS A 117 REMARK 465 ASN A 118 REMARK 465 TRP A 119 REMARK 465 PHE A 120 REMARK 465 LYS A 121 REMARK 465 ILE A 122 REMARK 465 THR A 123 REMARK 465 ILE A 124 REMARK 465 PRO A 125 REMARK 465 TYR A 126 REMARK 465 GLY A 127 REMARK 465 ARG A 128 REMARK 465 LYS A 129 REMARK 465 TYR A 130 REMARK 465 ASP A 131 REMARK 465 LYS A 132 REMARK 465 ALA A 133 REMARK 465 TRP A 134 REMARK 465 LEU A 135 REMARK 465 LEU A 136 REMARK 465 SER A 137 REMARK 465 MET A 138 REMARK 465 ILE A 139 REMARK 465 GLN A 140 REMARK 465 SER A 141 REMARK 465 LYS A 142 REMARK 465 CYS A 143 REMARK 465 SER A 144 REMARK 465 VAL A 145 REMARK 465 PRO A 146 REMARK 465 PHE A 147 REMARK 465 THR A 148 REMARK 465 PRO A 149 REMARK 465 ILE A 150 REMARK 465 GLU A 151 REMARK 465 PHE A 152 REMARK 465 HIS A 153 REMARK 465 TYR A 154 REMARK 465 GLU A 155 REMARK 465 ASN A 156 REMARK 465 THR A 157 REMARK 465 ARG A 158 REMARK 465 ALA A 159 REMARK 465 GLN A 160 REMARK 465 PHE A 161 REMARK 465 PHE A 162 REMARK 465 VAL A 163 REMARK 465 GLU A 164 REMARK 465 ASP A 165 REMARK 465 ALA A 166 REMARK 465 SER A 167 REMARK 465 THR A 168 REMARK 465 ALA A 169 REMARK 465 SER A 170 REMARK 465 ALA A 171 REMARK 465 LEU A 172 REMARK 465 LYS A 173 REMARK 465 ALA A 174 REMARK 465 VAL A 175 REMARK 465 ASN A 176 REMARK 465 TYR A 177 REMARK 465 LYS A 178 REMARK 465 ILE A 179 REMARK 465 LEU A 180 REMARK 465 ASP A 181 REMARK 465 ARG A 182 REMARK 465 GLU A 183 REMARK 465 ASN A 184 REMARK 465 ARG A 185 REMARK 465 ARG A 186 REMARK 465 ILE A 187 REMARK 465 SER A 188 REMARK 465 ILE A 189 REMARK 465 ILE A 190 REMARK 465 ILE A 191 REMARK 465 ASN A 192 REMARK 465 SER A 193 REMARK 465 SER A 194 REMARK 465 ALA A 195 REMARK 465 PRO A 196 REMARK 465 PRO A 197 REMARK 465 HIS A 198 REMARK 465 THR A 199 REMARK 465 ILE A 200 REMARK 465 LEU A 201 REMARK 465 ASN A 202 REMARK 465 PRO A 424 REMARK 465 GLN A 425 REMARK 465 ASN A 426 REMARK 465 MET A 550 REMARK 465 PRO A 551 REMARK 465 ALA A 552 REMARK 465 PRO A 553 REMARK 465 THR A 554 REMARK 465 PRO A 555 REMARK 465 ALA B 2 REMARK 465 SER C 95 REMARK 465 VAL C 96 REMARK 465 ARG C 97 REMARK 465 ARG C 98 REMARK 465 ASP C 99 REMARK 465 ARG C 100 REMARK 465 ALA C 101 REMARK 465 PRO C 102 REMARK 465 PRO C 103 REMARK 465 GLU C 104 REMARK 465 ARG C 105 REMARK 465 GLY C 106 REMARK 465 GLY C 107 REMARK 465 ALA C 108 REMARK 465 GLY C 109 REMARK 465 THR C 110 REMARK 465 SER C 111 REMARK 465 GLN C 112 REMARK 465 ASP C 113 REMARK 465 GLY C 114 REMARK 465 THR C 115 REMARK 465 SER C 116 REMARK 465 LYS C 117 REMARK 465 ASN C 118 REMARK 465 TRP C 119 REMARK 465 PHE C 120 REMARK 465 LYS C 121 REMARK 465 ILE C 122 REMARK 465 THR C 123 REMARK 465 ILE C 124 REMARK 465 PRO C 125 REMARK 465 TYR C 126 REMARK 465 GLY C 127 REMARK 465 ARG C 128 REMARK 465 LYS C 129 REMARK 465 TYR C 130 REMARK 465 ASP C 131 REMARK 465 LYS C 132 REMARK 465 ALA C 133 REMARK 465 TRP C 134 REMARK 465 LEU C 135 REMARK 465 LEU C 136 REMARK 465 SER C 137 REMARK 465 MET C 138 REMARK 465 ILE C 139 REMARK 465 GLN C 140 REMARK 465 SER C 141 REMARK 465 LYS C 142 REMARK 465 CYS C 143 REMARK 465 SER C 144 REMARK 465 VAL C 145 REMARK 465 PRO C 146 REMARK 465 PHE C 147 REMARK 465 THR C 148 REMARK 465 PRO C 149 REMARK 465 ILE C 150 REMARK 465 GLU C 151 REMARK 465 PHE C 152 REMARK 465 HIS C 153 REMARK 465 TYR C 154 REMARK 465 GLU C 155 REMARK 465 ASN C 156 REMARK 465 THR C 157 REMARK 465 ARG C 158 REMARK 465 ALA C 159 REMARK 465 GLN C 160 REMARK 465 PHE C 161 REMARK 465 PHE C 162 REMARK 465 VAL C 163 REMARK 465 GLU C 164 REMARK 465 ASP C 165 REMARK 465 ALA C 166 REMARK 465 SER C 167 REMARK 465 THR C 168 REMARK 465 ALA C 169 REMARK 465 SER C 170 REMARK 465 ALA C 171 REMARK 465 LEU C 172 REMARK 465 LYS C 173 REMARK 465 ALA C 174 REMARK 465 VAL C 175 REMARK 465 ASN C 176 REMARK 465 TYR C 177 REMARK 465 LYS C 178 REMARK 465 ILE C 179 REMARK 465 LEU C 180 REMARK 465 ASP C 181 REMARK 465 ARG C 182 REMARK 465 GLU C 183 REMARK 465 ASN C 184 REMARK 465 ARG C 185 REMARK 465 ARG C 186 REMARK 465 ILE C 187 REMARK 465 SER C 188 REMARK 465 ILE C 189 REMARK 465 ILE C 190 REMARK 465 ILE C 191 REMARK 465 ASN C 192 REMARK 465 SER C 193 REMARK 465 SER C 194 REMARK 465 ALA C 195 REMARK 465 PRO C 196 REMARK 465 PRO C 197 REMARK 465 HIS C 198 REMARK 465 THR C 199 REMARK 465 ILE C 200 REMARK 465 LEU C 201 REMARK 465 GLN C 425 REMARK 465 ASN C 426 REMARK 465 MET C 550 REMARK 465 PRO C 551 REMARK 465 ALA C 552 REMARK 465 PRO C 553 REMARK 465 THR C 554 REMARK 465 PRO C 555 REMARK 465 ALA D 2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER B 36 OE1 GLN B 55 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 429 19.71 58.89 REMARK 500 ASP A 508 -4.83 65.84 REMARK 500 ALA C 428 16.81 57.61 REMARK 500 ARG C 546 30.03 -99.93 REMARK 500 REMARK 500 REMARK: NULL DBREF 4WYK A 96 555 UNP Q9UBU9 NXF1_HUMAN 96 555 DBREF 4WYK B 2 140 UNP Q9UKK6 NXT1_HUMAN 2 140 DBREF 4WYK C 96 555 UNP Q9UBU9 NXF1_HUMAN 96 555 DBREF 4WYK D 2 140 UNP Q9UKK6 NXT1_HUMAN 2 140 SEQADV 4WYK SER A 95 UNP Q9UBU9 EXPRESSION TAG SEQADV 4WYK SER C 95 UNP Q9UBU9 EXPRESSION TAG SEQRES 1 A 461 SER VAL ARG ARG ASP ARG ALA PRO PRO GLU ARG GLY GLY SEQRES 2 A 461 ALA GLY THR SER GLN ASP GLY THR SER LYS ASN TRP PHE SEQRES 3 A 461 LYS ILE THR ILE PRO TYR GLY ARG LYS TYR ASP LYS ALA SEQRES 4 A 461 TRP LEU LEU SER MET ILE GLN SER LYS CYS SER VAL PRO SEQRES 5 A 461 PHE THR PRO ILE GLU PHE HIS TYR GLU ASN THR ARG ALA SEQRES 6 A 461 GLN PHE PHE VAL GLU ASP ALA SER THR ALA SER ALA LEU SEQRES 7 A 461 LYS ALA VAL ASN TYR LYS ILE LEU ASP ARG GLU ASN ARG SEQRES 8 A 461 ARG ILE SER ILE ILE ILE ASN SER SER ALA PRO PRO HIS SEQRES 9 A 461 THR ILE LEU ASN GLU LEU LYS PRO GLU GLN VAL GLU GLN SEQRES 10 A 461 LEU LYS LEU ILE MET SER LYS ARG TYR ASP GLY SER GLN SEQRES 11 A 461 GLN ALA LEU ASP LEU LYS GLY LEU ARG SER ASP PRO ASP SEQRES 12 A 461 LEU VAL ALA GLN ASN ILE ASP VAL VAL LEU ASN ARG ARG SEQRES 13 A 461 SER CYS MET ALA ALA THR LEU ARG ILE ILE GLU GLU ASN SEQRES 14 A 461 ILE PRO GLU LEU LEU SER LEU ASN LEU SER ASN ASN ARG SEQRES 15 A 461 LEU TYR ARG LEU ASP ASP MET SER SER ILE VAL GLN LYS SEQRES 16 A 461 ALA PRO ASN LEU LYS ILE LEU ASN LEU SER GLY ASN GLU SEQRES 17 A 461 LEU LYS SER GLU ARG GLU LEU ASP LYS ILE LYS GLY LEU SEQRES 18 A 461 LYS LEU GLU GLU LEU TRP LEU ASP GLY ASN SER LEU CYS SEQRES 19 A 461 ASP THR PHE ARG ASP GLN SER THR TYR ILE SER ALA ILE SEQRES 20 A 461 ARG GLU ARG PHE PRO LYS LEU LEU ARG LEU ASP GLY HIS SEQRES 21 A 461 GLU LEU PRO PRO PRO ILE ALA PHE ASP VAL GLU ALA PRO SEQRES 22 A 461 THR THR LEU PRO PRO CYS LYS GLY SER TYR PHE GLY THR SEQRES 23 A 461 GLU ASN LEU LYS SER LEU VAL LEU HIS PHE LEU GLN GLN SEQRES 24 A 461 TYR TYR ALA ILE TYR ASP SER GLY ASP ARG GLN GLY LEU SEQRES 25 A 461 LEU ASP ALA TYR HIS ASP GLY ALA CYS CYS SER LEU SER SEQRES 26 A 461 ILE PRO PHE ILE PRO GLN ASN PRO ALA ARG SER SER LEU SEQRES 27 A 461 ALA GLU TYR PHE LYS ASP SER ARG ASN VAL LYS LYS LEU SEQRES 28 A 461 LYS ASP PRO THR LEU ARG PHE ARG LEU LEU LYS HIS THR SEQRES 29 A 461 ARG LEU ASN VAL VAL ALA PHE LEU ASN GLU LEU PRO LYS SEQRES 30 A 461 THR GLN HIS ASP VAL ASN SER PHE VAL VAL ASP ILE SER SEQRES 31 A 461 ALA GLN THR SER THR LEU LEU CYS PHE SER VAL ASN GLY SEQRES 32 A 461 VAL PHE LYS GLU VAL ASP GLY LYS SER ARG ASP SER LEU SEQRES 33 A 461 ARG ALA PHE THR ARG THR PHE ILE ALA VAL PRO ALA SER SEQRES 34 A 461 ASN SER GLY LEU CYS ILE VAL ASN ASP GLU LEU PHE VAL SEQRES 35 A 461 ARG ASN ALA SER SER GLU GLU ILE GLN ARG ALA PHE ALA SEQRES 36 A 461 MET PRO ALA PRO THR PRO SEQRES 1 B 139 ALA SER VAL ASP PHE LYS THR TYR VAL ASP GLN ALA CYS SEQRES 2 B 139 ARG ALA ALA GLU GLU PHE VAL ASN VAL TYR TYR THR THR SEQRES 3 B 139 MET ASP LYS ARG ARG ARG LEU LEU SER ARG LEU TYR MET SEQRES 4 B 139 GLY THR ALA THR LEU VAL TRP ASN GLY ASN ALA VAL SER SEQRES 5 B 139 GLY GLN GLU SER LEU SER GLU PHE PHE GLU MET LEU PRO SEQRES 6 B 139 SER SER GLU PHE GLN ILE SER VAL VAL ASP CYS GLN PRO SEQRES 7 B 139 VAL HIS ASP GLU ALA THR PRO SER GLN THR THR VAL LEU SEQRES 8 B 139 VAL VAL ILE CYS GLY SER VAL LYS PHE GLU GLY ASN LYS SEQRES 9 B 139 GLN ARG ASP PHE ASN GLN ASN PHE ILE LEU THR ALA GLN SEQRES 10 B 139 ALA SER PRO SER ASN THR VAL TRP LYS ILE ALA SER ASP SEQRES 11 B 139 CYS PHE ARG PHE GLN ASP TRP ALA SER SEQRES 1 C 461 SER VAL ARG ARG ASP ARG ALA PRO PRO GLU ARG GLY GLY SEQRES 2 C 461 ALA GLY THR SER GLN ASP GLY THR SER LYS ASN TRP PHE SEQRES 3 C 461 LYS ILE THR ILE PRO TYR GLY ARG LYS TYR ASP LYS ALA SEQRES 4 C 461 TRP LEU LEU SER MET ILE GLN SER LYS CYS SER VAL PRO SEQRES 5 C 461 PHE THR PRO ILE GLU PHE HIS TYR GLU ASN THR ARG ALA SEQRES 6 C 461 GLN PHE PHE VAL GLU ASP ALA SER THR ALA SER ALA LEU SEQRES 7 C 461 LYS ALA VAL ASN TYR LYS ILE LEU ASP ARG GLU ASN ARG SEQRES 8 C 461 ARG ILE SER ILE ILE ILE ASN SER SER ALA PRO PRO HIS SEQRES 9 C 461 THR ILE LEU ASN GLU LEU LYS PRO GLU GLN VAL GLU GLN SEQRES 10 C 461 LEU LYS LEU ILE MET SER LYS ARG TYR ASP GLY SER GLN SEQRES 11 C 461 GLN ALA LEU ASP LEU LYS GLY LEU ARG SER ASP PRO ASP SEQRES 12 C 461 LEU VAL ALA GLN ASN ILE ASP VAL VAL LEU ASN ARG ARG SEQRES 13 C 461 SER CYS MET ALA ALA THR LEU ARG ILE ILE GLU GLU ASN SEQRES 14 C 461 ILE PRO GLU LEU LEU SER LEU ASN LEU SER ASN ASN ARG SEQRES 15 C 461 LEU TYR ARG LEU ASP ASP MET SER SER ILE VAL GLN LYS SEQRES 16 C 461 ALA PRO ASN LEU LYS ILE LEU ASN LEU SER GLY ASN GLU SEQRES 17 C 461 LEU LYS SER GLU ARG GLU LEU ASP LYS ILE LYS GLY LEU SEQRES 18 C 461 LYS LEU GLU GLU LEU TRP LEU ASP GLY ASN SER LEU CYS SEQRES 19 C 461 ASP THR PHE ARG ASP GLN SER THR TYR ILE SER ALA ILE SEQRES 20 C 461 ARG GLU ARG PHE PRO LYS LEU LEU ARG LEU ASP GLY HIS SEQRES 21 C 461 GLU LEU PRO PRO PRO ILE ALA PHE ASP VAL GLU ALA PRO SEQRES 22 C 461 THR THR LEU PRO PRO CYS LYS GLY SER TYR PHE GLY THR SEQRES 23 C 461 GLU ASN LEU LYS SER LEU VAL LEU HIS PHE LEU GLN GLN SEQRES 24 C 461 TYR TYR ALA ILE TYR ASP SER GLY ASP ARG GLN GLY LEU SEQRES 25 C 461 LEU ASP ALA TYR HIS ASP GLY ALA CYS CYS SER LEU SER SEQRES 26 C 461 ILE PRO PHE ILE PRO GLN ASN PRO ALA ARG SER SER LEU SEQRES 27 C 461 ALA GLU TYR PHE LYS ASP SER ARG ASN VAL LYS LYS LEU SEQRES 28 C 461 LYS ASP PRO THR LEU ARG PHE ARG LEU LEU LYS HIS THR SEQRES 29 C 461 ARG LEU ASN VAL VAL ALA PHE LEU ASN GLU LEU PRO LYS SEQRES 30 C 461 THR GLN HIS ASP VAL ASN SER PHE VAL VAL ASP ILE SER SEQRES 31 C 461 ALA GLN THR SER THR LEU LEU CYS PHE SER VAL ASN GLY SEQRES 32 C 461 VAL PHE LYS GLU VAL ASP GLY LYS SER ARG ASP SER LEU SEQRES 33 C 461 ARG ALA PHE THR ARG THR PHE ILE ALA VAL PRO ALA SER SEQRES 34 C 461 ASN SER GLY LEU CYS ILE VAL ASN ASP GLU LEU PHE VAL SEQRES 35 C 461 ARG ASN ALA SER SER GLU GLU ILE GLN ARG ALA PHE ALA SEQRES 36 C 461 MET PRO ALA PRO THR PRO SEQRES 1 D 139 ALA SER VAL ASP PHE LYS THR TYR VAL ASP GLN ALA CYS SEQRES 2 D 139 ARG ALA ALA GLU GLU PHE VAL ASN VAL TYR TYR THR THR SEQRES 3 D 139 MET ASP LYS ARG ARG ARG LEU LEU SER ARG LEU TYR MET SEQRES 4 D 139 GLY THR ALA THR LEU VAL TRP ASN GLY ASN ALA VAL SER SEQRES 5 D 139 GLY GLN GLU SER LEU SER GLU PHE PHE GLU MET LEU PRO SEQRES 6 D 139 SER SER GLU PHE GLN ILE SER VAL VAL ASP CYS GLN PRO SEQRES 7 D 139 VAL HIS ASP GLU ALA THR PRO SER GLN THR THR VAL LEU SEQRES 8 D 139 VAL VAL ILE CYS GLY SER VAL LYS PHE GLU GLY ASN LYS SEQRES 9 D 139 GLN ARG ASP PHE ASN GLN ASN PHE ILE LEU THR ALA GLN SEQRES 10 D 139 ALA SER PRO SER ASN THR VAL TRP LYS ILE ALA SER ASP SEQRES 11 D 139 CYS PHE ARG PHE GLN ASP TRP ALA SER HELIX 1 AA1 LYS A 205 ARG A 219 1 15 HELIX 2 AA2 ASP A 235 GLN A 241 1 7 HELIX 3 AA3 ARG A 249 ILE A 264 1 16 HELIX 4 AA4 LEU A 280 SER A 284 5 5 HELIX 5 AA5 SER A 285 ALA A 290 1 6 HELIX 6 AA6 SER A 305 LYS A 313 5 9 HELIX 7 AA7 ASN A 325 THR A 330 5 6 HELIX 8 AA8 ASP A 333 PHE A 345 1 13 HELIX 9 AA9 THR A 380 SER A 400 1 21 HELIX 10 AB1 ASP A 402 ASP A 408 5 7 HELIX 11 AB2 LEU A 432 LYS A 437 1 6 HELIX 12 AB3 ASP A 447 LEU A 455 1 9 HELIX 13 AB4 THR A 458 LEU A 469 1 12 HELIX 14 AB5 VAL A 476 PHE A 479 5 4 HELIX 15 AB6 SER A 523 SER A 525 5 3 HELIX 16 AB7 SER A 540 ARG A 546 1 7 HELIX 17 AB8 ASP B 5 ARG B 31 1 27 HELIX 18 AB9 ARG B 31 SER B 36 1 6 HELIX 19 AC1 GLY B 54 LEU B 65 1 12 HELIX 20 AC2 HIS B 81 THR B 85 5 5 HELIX 21 AC3 LYS C 205 ARG C 219 1 15 HELIX 22 AC4 ASP C 235 GLN C 241 1 7 HELIX 23 AC5 ARG C 249 ILE C 264 1 16 HELIX 24 AC6 LEU C 280 SER C 284 5 5 HELIX 25 AC7 SER C 285 ALA C 290 1 6 HELIX 26 AC8 SER C 305 LYS C 313 5 9 HELIX 27 AC9 ASN C 325 THR C 330 5 6 HELIX 28 AD1 ASP C 333 PHE C 345 1 13 HELIX 29 AD2 THR C 380 GLY C 401 1 22 HELIX 30 AD3 ASP C 402 ASP C 408 5 7 HELIX 31 AD4 SER C 430 ASP C 438 5 9 HELIX 32 AD5 ASP C 447 LEU C 455 1 9 HELIX 33 AD6 THR C 458 LEU C 469 1 12 HELIX 34 AD7 LYS C 505 ASP C 508 5 4 HELIX 35 AD8 SER C 540 ARG C 546 1 7 HELIX 36 AD9 ASP D 5 ARG D 31 1 27 HELIX 37 AE1 ARG D 31 SER D 36 1 6 HELIX 38 AE2 GLY D 54 LEU D 65 1 12 SHEET 1 AA1 7 TYR A 220 ASP A 221 0 SHEET 2 AA1 7 ALA A 226 ASP A 228 -1 O ALA A 226 N ASP A 221 SHEET 3 AA1 7 SER A 269 ASN A 271 1 O SER A 269 N LEU A 227 SHEET 4 AA1 7 ILE A 295 ASN A 297 1 O ILE A 295 N LEU A 270 SHEET 5 AA1 7 GLU A 319 TRP A 321 1 O GLU A 319 N LEU A 296 SHEET 6 AA1 7 ARG A 350 LEU A 351 1 O ARG A 350 N LEU A 320 SHEET 7 AA1 7 HIS A 354 GLU A 355 -1 O HIS A 354 N LEU A 351 SHEET 1 AA2 5 TYR A 410 SER A 419 0 SHEET 2 AA2 5 GLY A 526 ASN A 538 1 O LEU A 534 N SER A 417 SHEET 3 AA2 5 LEU A 510 ALA A 522 -1 N ALA A 512 O ARG A 537 SHEET 4 AA2 5 LEU A 491 GLU A 501 -1 N PHE A 493 O PHE A 517 SHEET 5 AA2 5 THR A 472 HIS A 474 -1 N GLN A 473 O LYS A 500 SHEET 1 AA3 5 TYR A 410 SER A 419 0 SHEET 2 AA3 5 GLY A 526 ASN A 538 1 O LEU A 534 N SER A 417 SHEET 3 AA3 5 LEU A 510 ALA A 522 -1 N ALA A 512 O ARG A 537 SHEET 4 AA3 5 LEU A 491 GLU A 501 -1 N PHE A 493 O PHE A 517 SHEET 5 AA3 5 VAL A 480 GLN A 486 -1 N VAL A 480 O ASN A 496 SHEET 1 AA4 6 ASN B 50 SER B 53 0 SHEET 2 AA4 6 TYR B 39 TRP B 47 -1 N TRP B 47 O ASN B 50 SHEET 3 AA4 6 THR B 124 PHE B 135 1 O PHE B 133 N VAL B 46 SHEET 4 AA4 6 ARG B 107 ALA B 119 -1 N ILE B 114 O ALA B 129 SHEET 5 AA4 6 THR B 90 PHE B 101 -1 N VAL B 93 O PHE B 113 SHEET 6 AA4 6 SER B 68 PRO B 79 -1 N GLN B 71 O SER B 98 SHEET 1 AA5 7 TYR C 220 ASP C 221 0 SHEET 2 AA5 7 ALA C 226 ASP C 228 -1 O ALA C 226 N ASP C 221 SHEET 3 AA5 7 SER C 269 ASN C 271 1 O SER C 269 N LEU C 227 SHEET 4 AA5 7 ILE C 295 ASN C 297 1 O ILE C 295 N LEU C 270 SHEET 5 AA5 7 GLU C 319 TRP C 321 1 O GLU C 319 N LEU C 296 SHEET 6 AA5 7 ARG C 350 LEU C 351 1 O ARG C 350 N LEU C 320 SHEET 7 AA5 7 HIS C 354 GLU C 355 -1 O HIS C 354 N LEU C 351 SHEET 1 AA6 5 TYR C 410 SER C 419 0 SHEET 2 AA6 5 LEU C 527 ASN C 538 1 O VAL C 530 N CYS C 415 SHEET 3 AA6 5 LEU C 510 PRO C 521 -1 N ALA C 512 O ARG C 537 SHEET 4 AA6 5 LEU C 491 GLU C 501 -1 N PHE C 493 O PHE C 517 SHEET 5 AA6 5 THR C 472 HIS C 474 -1 N GLN C 473 O LYS C 500 SHEET 1 AA7 5 TYR C 410 SER C 419 0 SHEET 2 AA7 5 LEU C 527 ASN C 538 1 O VAL C 530 N CYS C 415 SHEET 3 AA7 5 LEU C 510 PRO C 521 -1 N ALA C 512 O ARG C 537 SHEET 4 AA7 5 LEU C 491 GLU C 501 -1 N PHE C 493 O PHE C 517 SHEET 5 AA7 5 VAL C 480 GLN C 486 -1 N ASP C 482 O SER C 494 SHEET 1 AA8 6 ASN D 50 SER D 53 0 SHEET 2 AA8 6 TYR D 39 TRP D 47 -1 N TRP D 47 O ASN D 50 SHEET 3 AA8 6 THR D 124 PHE D 135 1 O PHE D 133 N VAL D 46 SHEET 4 AA8 6 ARG D 107 ALA D 119 -1 N THR D 116 O LYS D 127 SHEET 5 AA8 6 THR D 90 VAL D 99 -1 N ILE D 95 O GLN D 111 SHEET 6 AA8 6 GLN D 71 PRO D 79 -1 N ASP D 76 O VAL D 94 CRYST1 48.046 83.972 108.233 108.69 99.76 97.51 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020813 0.002742 0.004851 0.00000 SCALE2 0.000000 0.012012 0.004498 0.00000 SCALE3 0.000000 0.000000 0.010011 0.00000