PDB Short entry for 4WZN HEADER VIRAL PROTEIN 20-NOV-14 4WZN TITLE CRYSTAL STRUCTURE OF THE 2B PROTEIN SOLUBLE DOMAIN FROM HEPATITIS A TITLE 2 VIRUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: GENOME POLYPROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 765-981; COMPND 5 EC: 3.6.1.15,3.4.22.28,2.7.7.48; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN HEPATITIS A VIRUS GENOTYPE IB (ISOLATE SOURCE 3 HM175); SOURCE 4 ORGANISM_COMMON: HHAV; SOURCE 5 ORGANISM_TAXID: 12098; SOURCE 6 STRAIN: ISOLATE HM175; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PTYB1 KEYWDS FIBER, VIRAL RECRUITMENT MACHINERY, VIRAL PROTEIN, HEPATITIS A VIRUS, KEYWDS 2 NON-STRUCTURAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR D.GARRIGA,L.VIVES-ADRIAN,M.BUXADERAS,F.FERREIRA-DA-SILVA,B.ALMEIDA, AUTHOR 2 S.MACEDO-RIBEIRO,P.J.PEREIRA,N.VERDAGUER REVDAT 3 12-JUN-19 4WZN 1 JRNL REVDAT 2 18-MAR-15 4WZN 1 JRNL REVDAT 1 28-JAN-15 4WZN 0 JRNL AUTH L.VIVES-ADRIAN,D.GARRIGA,M.BUXADERAS,J.FRAGA,P.J.PEREIRA, JRNL AUTH 2 S.MACEDO-RIBEIRO,N.VERDAGUER JRNL TITL STRUCTURAL BASIS FOR HOST MEMBRANE REMODELING INDUCED BY JRNL TITL 2 PROTEIN 2B OF HEPATITIS A VIRUS. JRNL REF J.VIROL. V. 89 3648 2015 JRNL REFN ESSN 1098-5514 JRNL PMID 25589659 JRNL DOI 10.1128/JVI.02881-14 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH D.GARRIGA,L.VIVES-ADRIAN,M.BUXADERAS,F.FERREIRA-DA-SILVA, REMARK 1 AUTH 2 B.ALMEIDA,S.MACEDO-RIBEIRO,P.J.PEREIRA,N.VERDAGUER REMARK 1 TITL CLONING, PURIFICATION AND PRELIMINARY CRYSTALLOGRAPHIC REMARK 1 TITL 2 STUDIES OF THE 2AB PROTEIN FROM HEPATITIS A VIRUS. REMARK 1 REF ACTA CRYSTALLOGR.,SECT.F V. 10 1224 2011 REMARK 1 REFN ESSN 1744-3091 REMARK 1 PMID 22102033 REMARK 1 DOI 10.1107/S1744309111026261 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.8.0 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.22 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 13239 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.213 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 6.200 REMARK 3 FREE R VALUE TEST SET COUNT : 821 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 7 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.92 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2098 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2276 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 1953 REMARK 3 BIN R VALUE (WORKING SET) : 0.2225 REMARK 3 BIN FREE R VALUE : 0.2936 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 6.91 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 145 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2255 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 12 REMARK 3 SOLVENT ATOMS : 25 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 73.71 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 69.32 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.20890 REMARK 3 B22 (A**2) : -2.20890 REMARK 3 B33 (A**2) : 4.41790 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.420 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.932 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.916 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 2325 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 3134 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 827 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 54 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 333 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 2325 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 3134 ; 2.000 ; HARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : NULL ; NULL ; NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.13 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.65 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 20.36 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): 40.6417 70.1423 36.9237 REMARK 3 T TENSOR REMARK 3 T11: 0.1544 T22: -0.2929 REMARK 3 T33: -0.0206 T12: 0.0279 REMARK 3 T13: -0.0533 T23: 0.0265 REMARK 3 L TENSOR REMARK 3 L11: 0.6301 L22: 10.1436 REMARK 3 L33: 0.6507 L12: 2.0159 REMARK 3 L13: -0.3664 L23: -2.0033 REMARK 3 S TENSOR REMARK 3 S11: -0.0231 S12: 0.0876 S13: 0.3822 REMARK 3 S21: -0.6976 S22: 0.0760 S23: 0.8149 REMARK 3 S31: -0.3258 S32: -0.1196 S33: -0.0529 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|* } REMARK 3 ORIGIN FOR THE GROUP (A): 21.6889 40.8071 54.4538 REMARK 3 T TENSOR REMARK 3 T11: -0.2989 T22: -0.0197 REMARK 3 T33: -0.1435 T12: -0.0434 REMARK 3 T13: 0.0461 T23: -0.0525 REMARK 3 L TENSOR REMARK 3 L11: 10.8795 L22: 1.5022 REMARK 3 L33: 3.7160 L12: 0.9747 REMARK 3 L13: -2.9825 L23: -0.4740 REMARK 3 S TENSOR REMARK 3 S11: -0.1482 S12: -0.1830 S13: -0.6076 REMARK 3 S21: 0.0812 S22: 0.0115 S23: 0.2548 REMARK 3 S31: 0.1705 S32: -0.4536 S33: 0.1366 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4WZN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 21-NOV-14. REMARK 100 THE DEPOSITION ID IS D_1000204821. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-SEP-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.873 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13240 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 90.536 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 81.0 REMARK 200 DATA REDUNDANCY : 2.400 REMARK 200 R MERGE (I) : 0.09900 REMARK 200 R SYM (I) : 0.09900 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 8.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.85 REMARK 200 COMPLETENESS FOR SHELL (%) : 62.9 REMARK 200 DATA REDUNDANCY IN SHELL : 1.30 REMARK 200 R MERGE FOR SHELL (I) : 0.27300 REMARK 200 R SYM FOR SHELL (I) : 0.27300 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.78 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.98 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M MES PH5.2-5.8, 1.26M AMMONIUM REMARK 280 SULFATE, 5MM DTT, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 277K, VAPOR DIFFUSION, HANGING DROP REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+3/4 REMARK 290 4555 Y,-X,Z+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 36.71500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 55.07250 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 18.35750 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DECAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 90.42000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 90.42000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 36.71500 REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 90.42000 REMARK 350 BIOMT2 3 0.000000 -1.000000 0.000000 90.42000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 -36.71500 REMARK 350 BIOMT1 4 0.000000 -1.000000 0.000000 90.42000 REMARK 350 BIOMT2 4 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 -18.35750 REMARK 350 BIOMT1 5 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 5 -1.000000 0.000000 0.000000 90.42000 REMARK 350 BIOMT3 5 0.000000 0.000000 1.000000 18.35750 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1690 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15840 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -12.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 765 REMARK 465 MET A 766 REMARK 465 MET A 767 REMARK 465 SER A 768 REMARK 465 ARG A 769 REMARK 465 ILE A 770 REMARK 465 ALA A 771 REMARK 465 ALA A 772 REMARK 465 GLY A 773 REMARK 465 ASP A 774 REMARK 465 LEU A 775 REMARK 465 GLU A 776 REMARK 465 SER A 777 REMARK 465 SER A 778 REMARK 465 VAL A 779 REMARK 465 ASP A 780 REMARK 465 ASP A 781 REMARK 465 PRO A 782 REMARK 465 ARG A 783 REMARK 465 SER A 784 REMARK 465 GLU A 785 REMARK 465 GLU A 786 REMARK 465 ASP A 787 REMARK 465 LYS A 788 REMARK 465 ARG A 789 REMARK 465 PHE A 790 REMARK 465 GLU A 791 REMARK 465 SER A 792 REMARK 465 HIS A 793 REMARK 465 ILE A 794 REMARK 465 GLU A 795 REMARK 465 CYS A 796 REMARK 465 ARG A 797 REMARK 465 LYS A 798 REMARK 465 PRO A 799 REMARK 465 TYR A 800 REMARK 465 LYS A 801 REMARK 465 GLU A 802 REMARK 465 LEU A 803 REMARK 465 ARG A 804 REMARK 465 LEU A 805 REMARK 465 GLU A 806 REMARK 465 VAL A 807 REMARK 465 GLY A 808 REMARK 465 LYS A 809 REMARK 465 GLN A 810 REMARK 465 ARG A 811 REMARK 465 LEU A 812 REMARK 465 LYS A 813 REMARK 465 TYR A 814 REMARK 465 ALA A 815 REMARK 465 GLN A 816 REMARK 465 GLU A 817 REMARK 465 GLU A 818 REMARK 465 LEU A 819 REMARK 465 SER A 820 REMARK 465 ASN A 821 REMARK 465 GLU A 822 REMARK 465 VAL A 823 REMARK 465 LEU A 824 REMARK 465 PRO A 825 REMARK 465 PRO A 826 REMARK 465 PRO A 827 REMARK 465 ARG A 828 REMARK 465 LYS A 829 REMARK 465 MET A 830 REMARK 465 LYS A 831 REMARK 465 GLY A 832 REMARK 465 LEU A 833 REMARK 465 PHE A 834 REMARK 465 SER A 835 REMARK 465 GLN A 836 REMARK 465 ALA A 837 REMARK 465 GLU A 976 REMARK 465 ILE A 977 REMARK 465 LYS A 978 REMARK 465 GLU A 979 REMARK 465 GLN A 980 REMARK 465 GLY A 981 REMARK 465 SER B 765 REMARK 465 MET B 766 REMARK 465 MET B 767 REMARK 465 SER B 768 REMARK 465 ARG B 769 REMARK 465 ILE B 770 REMARK 465 ALA B 771 REMARK 465 ALA B 772 REMARK 465 GLY B 773 REMARK 465 ASP B 774 REMARK 465 LEU B 775 REMARK 465 GLU B 776 REMARK 465 SER B 777 REMARK 465 SER B 778 REMARK 465 VAL B 779 REMARK 465 ASP B 780 REMARK 465 ASP B 781 REMARK 465 PRO B 782 REMARK 465 ARG B 783 REMARK 465 SER B 784 REMARK 465 GLU B 785 REMARK 465 GLU B 786 REMARK 465 ASP B 787 REMARK 465 LYS B 788 REMARK 465 ARG B 789 REMARK 465 PHE B 790 REMARK 465 GLU B 791 REMARK 465 SER B 792 REMARK 465 HIS B 793 REMARK 465 ILE B 794 REMARK 465 GLU B 795 REMARK 465 CYS B 796 REMARK 465 ARG B 797 REMARK 465 LYS B 798 REMARK 465 PRO B 799 REMARK 465 TYR B 800 REMARK 465 LYS B 801 REMARK 465 GLU B 802 REMARK 465 LEU B 803 REMARK 465 ARG B 804 REMARK 465 LEU B 805 REMARK 465 GLU B 806 REMARK 465 VAL B 807 REMARK 465 GLY B 808 REMARK 465 LYS B 809 REMARK 465 GLN B 810 REMARK 465 ARG B 811 REMARK 465 LEU B 812 REMARK 465 LYS B 813 REMARK 465 TYR B 814 REMARK 465 ALA B 815 REMARK 465 GLN B 816 REMARK 465 GLU B 817 REMARK 465 GLU B 818 REMARK 465 LEU B 819 REMARK 465 SER B 820 REMARK 465 ASN B 821 REMARK 465 GLU B 822 REMARK 465 VAL B 823 REMARK 465 LEU B 824 REMARK 465 PRO B 825 REMARK 465 PRO B 826 REMARK 465 PRO B 827 REMARK 465 ARG B 828 REMARK 465 LYS B 829 REMARK 465 MET B 830 REMARK 465 LYS B 831 REMARK 465 GLY B 832 REMARK 465 LEU B 833 REMARK 465 PHE B 834 REMARK 465 ILE B 977 REMARK 465 LYS B 978 REMARK 465 GLU B 979 REMARK 465 GLN B 980 REMARK 465 GLY B 981 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 838 CG CD CE NZ REMARK 470 LYS A 918 CG CD CE NZ REMARK 470 GLN A 975 CG CD OE1 NE2 REMARK 470 LYS B 918 CG CD CE NZ REMARK 470 GLU B 976 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 904 94.91 -160.21 REMARK 500 ASP B 896 -8.26 -59.61 REMARK 500 GLN B 975 138.07 -172.62 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 1002 DBREF 4WZN A 765 981 UNP P08617 POLG_HAVHM 765 981 DBREF 4WZN B 765 981 UNP P08617 POLG_HAVHM 765 981 SEQRES 1 A 217 SER MET MET SER ARG ILE ALA ALA GLY ASP LEU GLU SER SEQRES 2 A 217 SER VAL ASP ASP PRO ARG SER GLU GLU ASP LYS ARG PHE SEQRES 3 A 217 GLU SER HIS ILE GLU CYS ARG LYS PRO TYR LYS GLU LEU SEQRES 4 A 217 ARG LEU GLU VAL GLY LYS GLN ARG LEU LYS TYR ALA GLN SEQRES 5 A 217 GLU GLU LEU SER ASN GLU VAL LEU PRO PRO PRO ARG LYS SEQRES 6 A 217 MET LYS GLY LEU PHE SER GLN ALA LYS ILE SER LEU PHE SEQRES 7 A 217 TYR THR GLU GLU HIS GLU ILE MET LYS PHE SER TRP ARG SEQRES 8 A 217 GLY VAL THR ALA ASP THR ARG ALA LEU ARG ARG PHE GLY SEQRES 9 A 217 PHE SER LEU ALA ALA GLY ARG SER VAL TRP THR LEU GLU SEQRES 10 A 217 MET ASP ALA GLY VAL LEU THR GLY ARG LEU ILE ARG LEU SEQRES 11 A 217 ASN ASP GLU LYS TRP THR GLU MET LYS ASP ASP LYS ILE SEQRES 12 A 217 VAL SER LEU ILE GLU LYS PHE THR SER ASN LYS TYR TRP SEQRES 13 A 217 SER LYS VAL ASN PHE PRO HIS GLY MET LEU ASP LEU GLU SEQRES 14 A 217 GLU ILE ALA ALA ASN SER LYS ASP PHE PRO ASN MET SER SEQRES 15 A 217 GLU THR ASP LEU CYS PHE LEU LEU HIS TRP LEU ASN PRO SEQRES 16 A 217 LYS LYS ILE ASN LEU ALA ASP ARG MET LEU GLY LEU SER SEQRES 17 A 217 GLY VAL GLN GLU ILE LYS GLU GLN GLY SEQRES 1 B 217 SER MET MET SER ARG ILE ALA ALA GLY ASP LEU GLU SER SEQRES 2 B 217 SER VAL ASP ASP PRO ARG SER GLU GLU ASP LYS ARG PHE SEQRES 3 B 217 GLU SER HIS ILE GLU CYS ARG LYS PRO TYR LYS GLU LEU SEQRES 4 B 217 ARG LEU GLU VAL GLY LYS GLN ARG LEU LYS TYR ALA GLN SEQRES 5 B 217 GLU GLU LEU SER ASN GLU VAL LEU PRO PRO PRO ARG LYS SEQRES 6 B 217 MET LYS GLY LEU PHE SER GLN ALA LYS ILE SER LEU PHE SEQRES 7 B 217 TYR THR GLU GLU HIS GLU ILE MET LYS PHE SER TRP ARG SEQRES 8 B 217 GLY VAL THR ALA ASP THR ARG ALA LEU ARG ARG PHE GLY SEQRES 9 B 217 PHE SER LEU ALA ALA GLY ARG SER VAL TRP THR LEU GLU SEQRES 10 B 217 MET ASP ALA GLY VAL LEU THR GLY ARG LEU ILE ARG LEU SEQRES 11 B 217 ASN ASP GLU LYS TRP THR GLU MET LYS ASP ASP LYS ILE SEQRES 12 B 217 VAL SER LEU ILE GLU LYS PHE THR SER ASN LYS TYR TRP SEQRES 13 B 217 SER LYS VAL ASN PHE PRO HIS GLY MET LEU ASP LEU GLU SEQRES 14 B 217 GLU ILE ALA ALA ASN SER LYS ASP PHE PRO ASN MET SER SEQRES 15 B 217 GLU THR ASP LEU CYS PHE LEU LEU HIS TRP LEU ASN PRO SEQRES 16 B 217 LYS LYS ILE ASN LEU ALA ASP ARG MET LEU GLY LEU SER SEQRES 17 B 217 GLY VAL GLN GLU ILE LYS GLU GLN GLY HET GOL A1001 6 HET GOL A1002 6 HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 GOL 2(C3 H8 O3) FORMUL 5 HOH *25(H2 O) HELIX 1 AA1 ASP A 904 THR A 915 1 12 HELIX 2 AA2 ASP A 931 SER A 939 1 9 HELIX 3 AA3 SER A 946 ASN A 958 1 13 HELIX 4 AA4 LEU A 964 LEU A 969 1 6 HELIX 5 AA5 ASP B 904 THR B 915 1 12 HELIX 6 AA6 ASP B 931 SER B 939 1 9 HELIX 7 AA7 SER B 946 ASN B 958 1 13 HELIX 8 AA8 ASN B 963 LEU B 969 1 7 SHEET 1 AA1 5 VAL A 886 ARG A 893 0 SHEET 2 AA1 5 TRP A 878 ASP A 883 -1 N THR A 879 O ILE A 892 SHEET 3 AA1 5 ARG A 862 SER A 870 -1 N PHE A 869 O TRP A 878 SHEET 4 AA1 5 SER A 840 GLU A 846 -1 N THR A 844 O ARG A 866 SHEET 5 AA1 5 THR A 900 MET A 902 -1 O THR A 900 N TYR A 843 SHEET 1 AA2 4 VAL A 886 ARG A 893 0 SHEET 2 AA2 4 TRP A 878 ASP A 883 -1 N THR A 879 O ILE A 892 SHEET 3 AA2 4 ARG A 862 SER A 870 -1 N PHE A 869 O TRP A 878 SHEET 4 AA2 4 LYS A 960 ASN A 963 -1 O LYS A 960 N ARG A 865 SHEET 1 AA3 4 MET A 850 SER A 853 0 SHEET 2 AA3 4 GLY A 856 ALA A 859 -1 O GLY A 856 N SER A 853 SHEET 3 AA3 4 GLY B 856 ASP B 860 -1 O ALA B 859 N VAL A 857 SHEET 4 AA3 4 LYS B 851 SER B 853 -1 N LYS B 851 O THR B 858 SHEET 1 AA4 5 VAL B 886 ARG B 893 0 SHEET 2 AA4 5 TRP B 878 ASP B 883 -1 N THR B 879 O ILE B 892 SHEET 3 AA4 5 LEU B 864 SER B 870 -1 N PHE B 869 O TRP B 878 SHEET 4 AA4 5 SER B 840 GLU B 846 -1 N THR B 844 O ARG B 866 SHEET 5 AA4 5 THR B 900 MET B 902 -1 O THR B 900 N TYR B 843 SHEET 1 AA5 4 VAL B 886 ARG B 893 0 SHEET 2 AA5 4 TRP B 878 ASP B 883 -1 N THR B 879 O ILE B 892 SHEET 3 AA5 4 LEU B 864 SER B 870 -1 N PHE B 869 O TRP B 878 SHEET 4 AA5 4 LYS B 960 LYS B 961 -1 O LYS B 960 N ARG B 865 SITE 1 AC1 4 TRP A 854 ARG A 855 HOH A1102 ARG B 865 SITE 1 AC2 3 GLU A 846 HIS A 847 ALA B 965 CRYST1 90.420 90.420 73.430 90.00 90.00 90.00 P 43 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011060 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011060 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013618 0.00000