PDB Short entry for 4XAT HEADER CELL ADHESION 15-DEC-14 4XAT TITLE CRYSTAL STRUCTURE OF THE OLFACTOMEDIN DOMAIN FROM TITLE 2 NOELIN/PANCORTIN/OLFACTOMEDIN-1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: NOELIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 200-467; COMPND 5 SYNONYM: NEURONAL OLFACTOMEDIN-RELATED ER LOCALIZED PROTEIN, COMPND 6 OLFACTOMEDIN-1; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: OLFM1, NOE1, NOEL1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS BETA PROPELLER, 5 BLADED PROPELLER, OLFACTOMEDIN, CELL ADHESION EXPDTA X-RAY DIFFRACTION AUTHOR S.E.HILL,E.NGUYEN,R.L.LIEBERMAN REVDAT 4 30-MAR-22 4XAT 1 LINK REVDAT 3 22-NOV-17 4XAT 1 REMARK REVDAT 2 13-SEP-17 4XAT 1 SOURCE KEYWDS REMARK REVDAT 1 15-JUL-15 4XAT 0 JRNL AUTH S.E.HILL,R.K.DONEGAN,E.NGUYEN,T.M.DESAI,R.L.LIEBERMAN JRNL TITL MOLECULAR DETAILS OF OLFACTOMEDIN DOMAINS PROVIDE PATHWAY TO JRNL TITL 2 STRUCTURE-FUNCTION STUDIES. JRNL REF PLOS ONE V. 10 30888 2015 JRNL REFN ESSN 1932-6203 JRNL PMID 26121352 JRNL DOI 10.1371/JOURNAL.PONE.0130888 REMARK 2 REMARK 2 RESOLUTION. 2.11 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.4 1496) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.11 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.27 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.1 REMARK 3 NUMBER OF REFLECTIONS : 14693 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.162 REMARK 3 R VALUE (WORKING SET) : 0.157 REMARK 3 FREE R VALUE : 0.204 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.060 REMARK 3 FREE R VALUE TEST SET COUNT : 1478 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 32.2697 - 4.6938 0.97 1334 149 0.1469 0.2088 REMARK 3 2 4.6938 - 3.7274 0.96 1235 137 0.1374 0.1661 REMARK 3 3 3.7274 - 3.2568 0.98 1238 138 0.1616 0.1943 REMARK 3 4 3.2568 - 2.9592 0.99 1245 140 0.1763 0.2049 REMARK 3 5 2.9592 - 2.7472 0.99 1243 139 0.1671 0.2036 REMARK 3 6 2.7472 - 2.5853 0.97 1215 137 0.1646 0.2040 REMARK 3 7 2.5853 - 2.4559 0.97 1197 134 0.1619 0.2386 REMARK 3 8 2.4559 - 2.3490 0.96 1185 133 0.1571 0.2277 REMARK 3 9 2.3490 - 2.2586 0.95 1181 132 0.1599 0.2181 REMARK 3 10 2.2586 - 2.1807 0.91 1128 126 0.1694 0.2541 REMARK 3 11 2.1807 - 2.1125 0.81 1014 113 0.1660 0.2379 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.480 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 2143 REMARK 3 ANGLE : 1.196 2914 REMARK 3 CHIRALITY : 0.051 304 REMARK 3 PLANARITY : 0.006 370 REMARK 3 DIHEDRAL : 14.441 752 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4XAT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-DEC-14. REMARK 100 THE DEPOSITION ID IS D_1000205358. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-APR-14 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300HS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15126 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.110 REMARK 200 RESOLUTION RANGE LOW (A) : 32.270 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 200 DATA REDUNDANCY : 3.100 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 9.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHASER, HKL-3000 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: HEPES PH 7.5 PEG 400 PEG 3000 REMARK 280 GLYCEROL, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 289.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 19.84050 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 47.82950 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 34.00800 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 47.82950 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 19.84050 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 34.00800 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 650 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10670 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -26.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU A 218 REMARK 465 ARG A 219 REMARK 465 ALA A 220 REMARK 465 GLY A 221 REMARK 465 MET A 222 REMARK 465 GLN A 223 REMARK 465 LYS A 224 REMARK 465 ARG A 481 REMARK 465 SER A 482 REMARK 465 ASP A 483 REMARK 465 GLU A 484 REMARK 465 LEU A 485 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 VAL A 239 O REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 626 O HOH A 722 1.89 REMARK 500 O LEU A 325 O HOH A 725 2.01 REMARK 500 OE1 GLU A 328 O HOH A 725 2.14 REMARK 500 OE2 GLU A 257 O HOH A 601 2.16 REMARK 500 OD2 ASP A 458 OH TYR A 462 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 338 -6.37 71.35 REMARK 500 SER A 353 31.76 -87.84 REMARK 500 TYR A 368 -157.23 -156.64 REMARK 500 LEU A 387 17.47 59.08 REMARK 500 SER A 419 5.72 -160.74 REMARK 500 SER A 447 -2.22 79.57 REMARK 500 LEU A 452 110.08 -164.31 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 718 DISTANCE = 6.36 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 504 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 302 O REMARK 620 2 GLN A 303 O 69.0 REMARK 620 3 ASP A 356 OD1 87.3 152.4 REMARK 620 4 LEU A 357 O 80.0 87.7 102.4 REMARK 620 5 ASP A 453 OD2 162.2 93.6 110.5 95.8 REMARK 620 6 HOH A 646 O 96.8 69.8 100.4 156.8 80.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 501 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 356 OD2 REMARK 620 2 GLU A 404 OE1 84.1 REMARK 620 3 ALA A 405 O 95.1 81.4 REMARK 620 4 LEU A 452 O 165.0 82.5 89.6 REMARK 620 5 ASP A 453 OD1 111.7 162.7 103.3 80.9 REMARK 620 6 HOH A 667 O 88.4 85.1 165.7 83.8 88.2 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 504 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4XAV RELATED DB: PDB DBREF 4XAT A 218 485 UNP Q99784 NOE1_HUMAN 200 467 SEQADV 4XAT GLY A 221 UNP Q99784 CYS 203 CONFLICT SEQRES 1 A 268 LEU ARG ALA GLY MET GLN LYS LEU ALA CYS GLY LYS LEU SEQRES 2 A 268 THR GLY ILE SER ASP PRO VAL THR VAL LYS THR SER GLY SEQRES 3 A 268 SER ARG PHE GLY SER TRP MET THR ASP PRO LEU ALA PRO SEQRES 4 A 268 GLU GLY ASP ASN ARG VAL TRP TYR MET ASP GLY TYR HIS SEQRES 5 A 268 ASN ASN ARG PHE VAL ARG GLU TYR LYS SER MET VAL ASP SEQRES 6 A 268 PHE MET ASN THR ASP ASN PHE THR SER HIS ARG LEU PRO SEQRES 7 A 268 HIS PRO TRP SER GLY THR GLY GLN VAL VAL TYR ASN GLY SEQRES 8 A 268 SER ILE TYR PHE ASN LYS PHE GLN SER HIS ILE ILE ILE SEQRES 9 A 268 ARG PHE ASP LEU LYS THR GLU THR ILE LEU LYS THR ARG SEQRES 10 A 268 SER LEU ASP TYR ALA GLY TYR ASN ASN MET TYR HIS TYR SEQRES 11 A 268 ALA TRP GLY GLY HIS SER ASP ILE ASP LEU MET VAL ASP SEQRES 12 A 268 GLU SER GLY LEU TRP ALA VAL TYR ALA THR ASN GLN ASN SEQRES 13 A 268 ALA GLY ASN ILE VAL VAL SER ARG LEU ASP PRO VAL SER SEQRES 14 A 268 LEU GLN THR LEU GLN THR TRP ASN THR SER TYR PRO LYS SEQRES 15 A 268 ARG SER ALA GLY GLU ALA PHE ILE ILE CYS GLY THR LEU SEQRES 16 A 268 TYR VAL THR ASN GLY TYR SER GLY GLY THR LYS VAL HIS SEQRES 17 A 268 TYR ALA TYR GLN THR ASN ALA SER THR TYR GLU TYR ILE SEQRES 18 A 268 ASP ILE PRO PHE GLN ASN LYS TYR SER HIS ILE SER MET SEQRES 19 A 268 LEU ASP TYR ASN PRO LYS ASP ARG ALA LEU TYR ALA TRP SEQRES 20 A 268 ASN ASN GLY HIS GLN ILE LEU TYR ASN VAL THR LEU PHE SEQRES 21 A 268 HIS VAL ILE ARG SER ASP GLU LEU HET CA A 501 1 HET GOL A 502 14 HET GOL A 503 14 HET NA A 504 1 HETNAM CA CALCIUM ION HETNAM GOL GLYCEROL HETNAM NA SODIUM ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 CA CA 2+ FORMUL 3 GOL 2(C3 H8 O3) FORMUL 5 NA NA 1+ FORMUL 6 HOH *139(H2 O) HELIX 1 AA1 SER A 279 THR A 286 1 8 HELIX 2 AA2 ARG A 400 ALA A 402 5 3 SHEET 1 AA1 3 LYS A 229 ILE A 233 0 SHEET 2 AA1 3 HIS A 468 PHE A 477 -1 O PHE A 477 N LYS A 229 SHEET 3 AA1 3 VAL A 237 THR A 241 -1 N VAL A 237 O LEU A 471 SHEET 1 AA2 4 LYS A 229 ILE A 233 0 SHEET 2 AA2 4 HIS A 468 PHE A 477 -1 O PHE A 477 N LYS A 229 SHEET 3 AA2 4 ALA A 460 ASN A 465 -1 N ASN A 465 O HIS A 468 SHEET 4 AA2 4 ILE A 449 ASN A 455 -1 N ASP A 453 O TYR A 462 SHEET 1 AA3 4 GLY A 247 THR A 251 0 SHEET 2 AA3 4 VAL A 262 ASP A 266 -1 O MET A 265 N SER A 248 SHEET 3 AA3 4 HIS A 269 TYR A 277 -1 O TYR A 277 N VAL A 262 SHEET 4 AA3 4 THR A 290 SER A 299 -1 O THR A 290 N GLU A 276 SHEET 1 AA4 4 VAL A 304 TYR A 306 0 SHEET 2 AA4 4 SER A 309 ASN A 313 -1 O SER A 309 N TYR A 306 SHEET 3 AA4 4 ILE A 319 ASP A 324 -1 O ILE A 321 N PHE A 312 SHEET 4 AA4 4 ILE A 330 SER A 335 -1 O ARG A 334 N ILE A 320 SHEET 1 AA5 4 ASP A 356 ASP A 360 0 SHEET 2 AA5 4 GLY A 363 ALA A 369 -1 O VAL A 367 N ASP A 356 SHEET 3 AA5 4 ASN A 376 LEU A 382 -1 O VAL A 378 N TYR A 368 SHEET 4 AA5 4 THR A 389 PRO A 398 -1 O TYR A 397 N ILE A 377 SHEET 1 AA6 4 ALA A 405 ILE A 408 0 SHEET 2 AA6 4 THR A 411 THR A 415 -1 O TYR A 413 N PHE A 406 SHEET 3 AA6 4 LYS A 423 GLN A 429 -1 O TYR A 428 N LEU A 412 SHEET 4 AA6 4 THR A 434 PRO A 441 -1 O THR A 434 N GLN A 429 SSBOND 1 CYS A 227 CYS A 409 1555 1555 2.06 LINK O GLY A 302 NA NA A 504 1555 1555 2.89 LINK O GLN A 303 NA NA A 504 1555 1555 3.01 LINK OD2 ASP A 356 CA CA A 501 1555 1555 2.32 LINK OD1 ASP A 356 NA NA A 504 1555 1555 2.33 LINK O LEU A 357 NA NA A 504 1555 1555 2.18 LINK OE1 GLU A 404 CA CA A 501 1555 1555 2.43 LINK O ALA A 405 CA CA A 501 1555 1555 2.41 LINK O LEU A 452 CA CA A 501 1555 1555 2.37 LINK OD1 ASP A 453 CA CA A 501 1555 1555 2.42 LINK OD2 ASP A 453 NA NA A 504 1555 1555 2.26 LINK CA CA A 501 O HOH A 667 1555 1555 2.45 LINK NA NA A 504 O HOH A 646 1555 1555 2.37 CISPEP 1 GLU A 257 GLY A 258 0 -16.05 CISPEP 2 GLY A 420 GLY A 421 0 2.01 SITE 1 AC1 7 ASP A 356 MET A 358 GLU A 404 ALA A 405 SITE 2 AC1 7 LEU A 452 ASP A 453 HOH A 667 SITE 1 AC2 5 ILE A 233 HIS A 269 HIS A 352 PRO A 441 SITE 2 AC2 5 GLN A 443 SITE 1 AC3 5 PRO A 295 ASP A 458 LEU A 471 ASN A 473 SITE 2 AC3 5 HOH A 614 SITE 1 AC4 6 GLY A 302 GLN A 303 ASP A 356 LEU A 357 SITE 2 AC4 6 ASP A 453 HOH A 646 CRYST1 39.681 68.016 95.659 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.025201 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014702 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010454 0.00000