PDB Short entry for 4XT3 HEADER VIRAL PROTEIN/SIGNALLING PROTEIN 22-JAN-15 4XT3 TITLE STRUCTURE OF A VIRAL GPCR BOUND TO HUMAN CHEMOKINE CX3CL1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: G-PROTEIN COUPLED RECEPTOR HOMOLOG US28; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: HHRF3; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: FRACTALKINE; COMPND 8 CHAIN: B; COMPND 9 FRAGMENT: UNP RESIDUES 25-101; COMPND 10 SYNONYM: C-X3-C MOTIF CHEMOKINE 1,CX3C MEMBRANE-ANCHORED CHEMOKINE, COMPND 11 NEUROTACTIN,SMALL-INDUCIBLE CYTOKINE D1; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CYTOMEGALOVIRUS; SOURCE 3 ORGANISM_TAXID: 10358; SOURCE 4 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 5 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 7 EXPRESSION_SYSTEM_CELL_LINE: HEK293S GNTI-; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: CX3CL1, FKN, NTT, SCYD1, A-152E5.2; SOURCE 13 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 14 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 16 EXPRESSION_SYSTEM_CELL_LINE: HEK293S GNTI- KEYWDS GPCR, CHEMOKINE, MEMBRANE PROTEIN, COMPLEX, VIRAL PROTEIN-CYTOKINE KEYWDS 2 COMPLEX, VIRAL PROTEIN-SIGNALLING PROTEIN COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR J.S.BURG,K.M.JUDE,D.WAGHRAY,K.C.GARCIA REVDAT 4 27-SEP-23 4XT3 1 HETSYN REVDAT 3 29-JUL-20 4XT3 1 COMPND SOURCE KEYWDS JRNL REVDAT 3 2 1 REMARK SEQRES HETNAM LINK REVDAT 3 3 1 SITE ATOM REVDAT 2 18-MAR-15 4XT3 1 JRNL REVDAT 1 04-MAR-15 4XT3 0 JRNL AUTH J.S.BURG,J.R.INGRAM,A.J.VENKATAKRISHNAN,K.M.JUDE, JRNL AUTH 2 A.DUKKIPATI,E.N.FEINBERG,A.ANGELINI,D.WAGHRAY,R.O.DROR, JRNL AUTH 3 H.L.PLOEGH,K.C.GARCIA JRNL TITL STRUCTURAL BIOLOGY. STRUCTURAL BASIS FOR CHEMOKINE JRNL TITL 2 RECOGNITION AND ACTIVATION OF A VIRAL G PROTEIN-COUPLED JRNL TITL 3 RECEPTOR. JRNL REF SCIENCE V. 347 1113 2015 JRNL REFN ESSN 1095-9203 JRNL PMID 25745166 JRNL DOI 10.1126/SCIENCE.AAA5026 REMARK 2 REMARK 2 RESOLUTION. 3.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: DEV_1839) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.92 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 84.9 REMARK 3 NUMBER OF REFLECTIONS : 4827 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.288 REMARK 3 R VALUE (WORKING SET) : 0.284 REMARK 3 FREE R VALUE : 0.322 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.030 REMARK 3 FREE R VALUE TEST SET COUNT : 484 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.9243 - 5.4798 0.96 1693 190 0.2636 0.2914 REMARK 3 2 5.4798 - 4.3503 0.94 1571 174 0.3054 0.3458 REMARK 3 3 4.3503 - 3.8006 0.64 1079 120 0.3013 0.3654 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.660 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 39.580 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 2851 REMARK 3 ANGLE : 0.874 3912 REMARK 3 CHIRALITY : 0.031 483 REMARK 3 PLANARITY : 0.005 468 REMARK 3 DIHEDRAL : 11.365 942 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4XT3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-JAN-15. REMARK 100 THE DEPOSITION ID IS D_1000206266. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-APR-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.4 REMARK 200 NUMBER OF CRYSTALS USED : 26 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.033 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 4834 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.800 REMARK 200 RESOLUTION RANGE LOW (A) : 48.920 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 85.0 REMARK 200 DATA REDUNDANCY : 5.600 REMARK 200 R MERGE (I) : 0.27500 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 4.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.94 REMARK 200 COMPLETENESS FOR SHELL (%) : 55.5 REMARK 200 DATA REDUNDANCY IN SHELL : 2.90 REMARK 200 R MERGE FOR SHELL (I) : 0.55500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4MBS, 1F2L, 3ONA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.99 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.62 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 300, HEPES, AMMONIUM PHOSPHATE, PH REMARK 280 7.4, LIPIDIC CUBIC PHASE, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 47.20000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 47.20000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 29.95000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 96.35000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 29.95000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 96.35000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 47.20000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 29.95000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 96.35000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 47.20000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 29.95000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 96.35000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3580 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18570 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -7.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 P PO4 A 402 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A -7 REMARK 465 TYR A -6 REMARK 465 LYS A -5 REMARK 465 ASP A -4 REMARK 465 ASP A -3 REMARK 465 ASP A -2 REMARK 465 ASP A -1 REMARK 465 ALA A 0 REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 PRO A 3 REMARK 465 THR A 4 REMARK 465 THR A 5 REMARK 465 THR A 6 REMARK 465 THR A 7 REMARK 465 ALA A 8 REMARK 465 GLU A 9 REMARK 465 LEU A 10 REMARK 465 THR A 11 REMARK 465 THR A 12 REMARK 465 GLU A 13 REMARK 465 PHE A 14 REMARK 465 ASP A 15 REMARK 465 TYR A 16 REMARK 465 ASP A 17 REMARK 465 ASN A 97 REMARK 465 SER A 98 REMARK 465 LEU A 99 REMARK 465 PHE A 309 REMARK 465 ARG A 310 REMARK 465 GLN A 311 REMARK 465 ARG A 312 REMARK 465 LEU A 313 REMARK 465 PHE A 314 REMARK 465 SER A 315 REMARK 465 ARG A 316 REMARK 465 ASP A 317 REMARK 465 VAL A 318 REMARK 465 SER A 319 REMARK 465 TRP A 320 REMARK 465 TYR A 321 REMARK 465 HIS A 322 REMARK 465 SER A 323 REMARK 465 MET A 324 REMARK 465 SER A 325 REMARK 465 PHE A 326 REMARK 465 SER A 327 REMARK 465 ARG A 328 REMARK 465 ARG A 329 REMARK 465 SER A 330 REMARK 465 SER A 331 REMARK 465 PRO A 332 REMARK 465 SER A 333 REMARK 465 ARG A 334 REMARK 465 ARG A 335 REMARK 465 GLU A 336 REMARK 465 THR A 337 REMARK 465 SER A 338 REMARK 465 SER A 339 REMARK 465 ASP A 340 REMARK 465 THR A 341 REMARK 465 LEU A 342 REMARK 465 SER A 343 REMARK 465 ASP A 344 REMARK 465 GLU A 345 REMARK 465 VAL A 346 REMARK 465 CYS A 347 REMARK 465 ARG A 348 REMARK 465 VAL A 349 REMARK 465 SER A 350 REMARK 465 GLN A 351 REMARK 465 ILE A 352 REMARK 465 ILE A 353 REMARK 465 PRO A 354 REMARK 465 ALA B 70 REMARK 465 ALA B 71 REMARK 465 LEU B 72 REMARK 465 THR B 73 REMARK 465 ARG B 74 REMARK 465 ASN B 75 REMARK 465 GLY B 76 REMARK 465 GLY B 77 REMARK 465 SER B 78 REMARK 465 GLY B 79 REMARK 465 SER B 80 REMARK 465 GLY B 81 REMARK 465 SER B 82 REMARK 465 ALA B 83 REMARK 465 ALA B 84 REMARK 465 ALA B 85 REMARK 465 LEU B 86 REMARK 465 GLU B 87 REMARK 465 VAL B 88 REMARK 465 LEU B 89 REMARK 465 PHE B 90 REMARK 465 GLN B 91 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 61 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 62 CD NE CZ NH1 NH2 REMARK 470 ARG A 63 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 65 CG CD OE1 NE2 REMARK 470 GLN A 91 CG CD OE1 NE2 REMARK 470 ASP A 95 CG OD1 OD2 REMARK 470 HIS A 96 CG ND1 CD2 CE1 NE2 REMARK 470 ARG A 137 CD NE CZ NH1 NH2 REMARK 470 ARG A 139 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 168 CG CD CE NZ REMARK 470 LEU A 180 CG CD1 CD2 REMARK 470 GLU A 264 CG CD OE1 OE2 REMARK 470 ARG A 267 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 270 CG CD CE NZ REMARK 470 ARG A 271 CG CD NE CZ NH1 NH2 REMARK 470 THR A 296 OG1 CG2 REMARK 470 LYS A 297 CG CD CE NZ REMARK 470 PHE A 298 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ARG A 299 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 300 CG CD OE1 NE2 REMARK 470 GLU A 301 CG CD OE1 OE2 REMARK 470 CYS A 304 SG REMARK 470 LEU A 305 CG CD1 CD2 REMARK 470 LEU A 306 CG CD1 CD2 REMARK 470 GLU A 308 CG CD OE1 OE2 REMARK 470 LYS B 7 CG CD CE NZ REMARK 470 LYS B 14 CG CD CE NZ REMARK 470 LYS B 18 CG CD CE NZ REMARK 470 ILE B 19 CG1 CG2 CD1 REMARK 470 LEU B 23 CG CD1 CD2 REMARK 470 HIS B 26 CG ND1 CD2 CE1 NE2 REMARK 470 LYS B 36 CG CD CE NZ REMARK 470 ARG B 37 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 44 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 47 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 54 CG CD CE NZ REMARK 470 LYS B 59 CG CD CE NZ REMARK 470 MET B 62 CG SD CE REMARK 470 GLN B 63 CG CD OE1 NE2 REMARK 470 HIS B 64 CG ND1 CD2 CE1 NE2 REMARK 470 ASP B 66 CG OD1 OD2 REMARK 470 ARG B 67 CG CD NE CZ NH1 NH2 REMARK 470 GLN B 68 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 20 21.41 -79.71 REMARK 500 LEU A 45 -75.44 -54.79 REMARK 500 ASP A 176 97.02 -64.86 REMARK 500 TYR A 291 -50.53 -129.51 REMARK 500 ALA A 307 47.76 -81.45 REMARK 500 LYS B 18 -39.94 -146.93 REMARK 500 GLN B 68 -70.13 -73.80 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4XT1 RELATED DB: PDB DBREF 4XT3 A 1 354 UNP P69332 US28_HCMVA 1 354 DBREF 4XT3 B 1 77 UNP P78423 X3CL1_HUMAN 25 101 SEQADV 4XT3 ASP A -7 UNP P69332 EXPRESSION TAG SEQADV 4XT3 TYR A -6 UNP P69332 EXPRESSION TAG SEQADV 4XT3 LYS A -5 UNP P69332 EXPRESSION TAG SEQADV 4XT3 ASP A -4 UNP P69332 EXPRESSION TAG SEQADV 4XT3 ASP A -3 UNP P69332 EXPRESSION TAG SEQADV 4XT3 ASP A -2 UNP P69332 EXPRESSION TAG SEQADV 4XT3 ASP A -1 UNP P69332 EXPRESSION TAG SEQADV 4XT3 ALA A 0 UNP P69332 EXPRESSION TAG SEQADV 4XT3 SER B 78 UNP P78423 EXPRESSION TAG SEQADV 4XT3 GLY B 79 UNP P78423 EXPRESSION TAG SEQADV 4XT3 SER B 80 UNP P78423 EXPRESSION TAG SEQADV 4XT3 GLY B 81 UNP P78423 EXPRESSION TAG SEQADV 4XT3 SER B 82 UNP P78423 EXPRESSION TAG SEQADV 4XT3 ALA B 83 UNP P78423 EXPRESSION TAG SEQADV 4XT3 ALA B 84 UNP P78423 EXPRESSION TAG SEQADV 4XT3 ALA B 85 UNP P78423 EXPRESSION TAG SEQADV 4XT3 LEU B 86 UNP P78423 EXPRESSION TAG SEQADV 4XT3 GLU B 87 UNP P78423 EXPRESSION TAG SEQADV 4XT3 VAL B 88 UNP P78423 EXPRESSION TAG SEQADV 4XT3 LEU B 89 UNP P78423 EXPRESSION TAG SEQADV 4XT3 PHE B 90 UNP P78423 EXPRESSION TAG SEQADV 4XT3 GLN B 91 UNP P78423 EXPRESSION TAG SEQRES 1 A 362 ASP TYR LYS ASP ASP ASP ASP ALA MET THR PRO THR THR SEQRES 2 A 362 THR THR ALA GLU LEU THR THR GLU PHE ASP TYR ASP GLU SEQRES 3 A 362 ASP ALA THR PRO CYS VAL PHE THR ASP VAL LEU ASN GLN SEQRES 4 A 362 SER LYS PRO VAL THR LEU PHE LEU TYR GLY VAL VAL PHE SEQRES 5 A 362 LEU PHE GLY SER ILE GLY ASN PHE LEU VAL ILE PHE THR SEQRES 6 A 362 ILE THR TRP ARG ARG ARG ILE GLN CYS SER GLY ASP VAL SEQRES 7 A 362 TYR PHE ILE ASN LEU ALA ALA ALA ASP LEU LEU PHE VAL SEQRES 8 A 362 CYS THR LEU PRO LEU TRP MET GLN TYR LEU LEU ASP HIS SEQRES 9 A 362 ASN SER LEU ALA SER VAL PRO CYS THR LEU LEU THR ALA SEQRES 10 A 362 CYS PHE TYR VAL ALA MET PHE ALA SER LEU CYS PHE ILE SEQRES 11 A 362 THR GLU ILE ALA LEU ASP ARG TYR TYR ALA ILE VAL TYR SEQRES 12 A 362 MET ARG TYR ARG PRO VAL LYS GLN ALA CYS LEU PHE SER SEQRES 13 A 362 ILE PHE TRP TRP ILE PHE ALA VAL ILE ILE ALA ILE PRO SEQRES 14 A 362 HIS PHE MET VAL VAL THR LYS LYS ASP ASN GLN CYS MET SEQRES 15 A 362 THR ASP TYR ASP TYR LEU GLU VAL SER TYR PRO ILE ILE SEQRES 16 A 362 LEU ASN VAL GLU LEU MET LEU GLY ALA PHE VAL ILE PRO SEQRES 17 A 362 LEU SER VAL ILE SER TYR CYS TYR TYR ARG ILE SER ARG SEQRES 18 A 362 ILE VAL ALA VAL SER GLN SER ARG HIS LYS GLY ARG ILE SEQRES 19 A 362 VAL ARG VAL LEU ILE ALA VAL VAL LEU VAL PHE ILE ILE SEQRES 20 A 362 PHE TRP LEU PRO TYR HIS LEU THR LEU PHE VAL ASP THR SEQRES 21 A 362 LEU LYS LEU LEU LYS TRP ILE SER SER SER CYS GLU PHE SEQRES 22 A 362 GLU ARG SER LEU LYS ARG ALA LEU ILE LEU THR GLU SER SEQRES 23 A 362 LEU ALA PHE CYS HIS CYS CYS LEU ASN PRO LEU LEU TYR SEQRES 24 A 362 VAL PHE VAL GLY THR LYS PHE ARG GLN GLU LEU HIS CYS SEQRES 25 A 362 LEU LEU ALA GLU PHE ARG GLN ARG LEU PHE SER ARG ASP SEQRES 26 A 362 VAL SER TRP TYR HIS SER MET SER PHE SER ARG ARG SER SEQRES 27 A 362 SER PRO SER ARG ARG GLU THR SER SER ASP THR LEU SER SEQRES 28 A 362 ASP GLU VAL CYS ARG VAL SER GLN ILE ILE PRO SEQRES 1 B 91 PCA HIS HIS GLY VAL THR LYS CYS ASN ILE THR CYS SER SEQRES 2 B 91 LYS MET THR SER LYS ILE PRO VAL ALA LEU LEU ILE HIS SEQRES 3 B 91 TYR GLN GLN ASN GLN ALA SER CYS GLY LYS ARG ALA ILE SEQRES 4 B 91 ILE LEU GLU THR ARG GLN HIS ARG LEU PHE CYS ALA ASP SEQRES 5 B 91 PRO LYS GLU GLN TRP VAL LYS ASP ALA MET GLN HIS LEU SEQRES 6 B 91 ASP ARG GLN ALA ALA ALA LEU THR ARG ASN GLY GLY SER SEQRES 7 B 91 GLY SER GLY SER ALA ALA ALA LEU GLU VAL LEU PHE GLN MODRES 4XT3 PCA B 1 GLN MODIFIED RESIDUE HET PCA B 1 8 HET NAG C 1 14 HET NAG C 2 14 HET NAG C 3 14 HET UNL A 401 9 HET PO4 A 402 5 HETNAM PCA PYROGLUTAMIC ACID HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM UNL UNKNOWN LIGAND HETNAM PO4 PHOSPHATE ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 2 PCA C5 H7 N O3 FORMUL 3 NAG 3(C8 H15 N O6) FORMUL 5 PO4 O4 P 3- HELIX 1 AA1 PHE A 25 ARG A 62 1 38 HELIX 2 AA2 CYS A 66 CYS A 84 1 19 HELIX 3 AA3 THR A 85 LEU A 94 1 10 HELIX 4 AA4 PRO A 103 VAL A 134 1 32 HELIX 5 AA5 PRO A 140 ILE A 158 1 19 HELIX 6 AA6 ALA A 159 MET A 164 1 6 HELIX 7 AA7 VAL A 182 PHE A 197 1 16 HELIX 8 AA8 PHE A 197 ALA A 216 1 20 HELIX 9 AA9 LYS A 223 LEU A 256 1 34 HELIX 10 AB1 SER A 262 PHE A 281 1 20 HELIX 11 AB2 CYS A 282 VAL A 292 1 11 HELIX 12 AB3 LYS A 297 ALA A 307 1 11 HELIX 13 AB4 GLN B 31 GLY B 35 5 5 HELIX 14 AB5 TRP B 57 ALA B 69 1 13 SHEET 1 AA1 2 CYS A 23 VAL A 24 0 SHEET 2 AA1 2 ILE B 10 THR B 11 -1 O THR B 11 N CYS A 23 SHEET 1 AA2 2 VAL A 166 LYS A 169 0 SHEET 2 AA2 2 GLN A 172 THR A 175 -1 O MET A 174 N THR A 167 SHEET 1 AA3 3 LEU B 24 GLN B 29 0 SHEET 2 AA3 3 ILE B 39 THR B 43 -1 O ILE B 40 N GLN B 28 SHEET 3 AA3 3 LEU B 48 ALA B 51 -1 O PHE B 49 N LEU B 41 SSBOND 1 CYS A 23 CYS A 263 1555 1555 2.03 SSBOND 2 CYS A 104 CYS A 173 1555 1555 2.03 SSBOND 3 CYS B 8 CYS B 34 1555 1555 2.03 SSBOND 4 CYS B 12 CYS B 50 1555 1555 2.03 LINK C PCA B 1 N HIS B 2 1555 1555 1.33 LINK ND2 ASN B 9 C1 NAG C 1 1555 1555 1.44 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.43 LINK O4 NAG C 2 C1 NAG C 3 1555 1555 1.44 CISPEP 1 ILE B 19 PRO B 20 0 -7.26 CRYST1 59.900 192.700 94.400 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016694 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005189 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010593 0.00000