PDB Short entry for 4YC7 HEADER SIGNALING PROTEIN 19-FEB-15 4YC7 TITLE CRYSTAL STRUCTURE OF HUMAN FMNL2 GBD-FH3 DOMAINS BOUND TO CDC42-GPPNHP COMPND MOL_ID: 1; COMPND 2 MOLECULE: FORMIN-LIKE PROTEIN 2; COMPND 3 CHAIN: B; COMPND 4 FRAGMENT: UNP RESIDUES 1-379; COMPND 5 SYNONYM: FORMIN HOMOLOGY 2 DOMAIN-CONTAINING PROTEIN 2, FMNL2; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: CELL DIVISION CONTROL PROTEIN 42 HOMOLOG; COMPND 9 CHAIN: A; COMPND 10 FRAGMENT: UNP RESIDUES 1-179; COMPND 11 SYNONYM: G25K GTP-BINDING PROTEIN, CDC42; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: FMNL2, FHOD2, KIAA1902; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: CDC42; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS SIGNALING PROTEIN, ARMADILLO REPEAT, RHO GTPASE, CELL CYCLE EXPDTA X-RAY DIFFRACTION AUTHOR S.KUHN,M.GEYER REVDAT 3 10-JAN-24 4YC7 1 REMARK REVDAT 2 27-MAY-15 4YC7 1 JRNL REVDAT 1 13-MAY-15 4YC7 0 JRNL AUTH S.KUHN,C.ERDMANN,F.KAGE,J.BLOCK,L.SCHWENKMEZGER,A.STEFFEN, JRNL AUTH 2 K.ROTTNER,M.GEYER JRNL TITL THE STRUCTURE OF FMNL2-CDC42 YIELDS INSIGHTS INTO THE JRNL TITL 2 MECHANISM OF LAMELLIPODIA AND FILOPODIA FORMATION. JRNL REF NAT COMMUN V. 6 7088 2015 JRNL REFN ESSN 2041-1723 JRNL PMID 25963737 JRNL DOI 10.1038/NCOMMS8088 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7.3_928) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.40 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 2.020 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 21696 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.196 REMARK 3 R VALUE (WORKING SET) : 0.194 REMARK 3 FREE R VALUE : 0.253 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.120 REMARK 3 FREE R VALUE TEST SET COUNT : 1110 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.4405 - 4.9982 1.00 2756 152 0.1773 0.2250 REMARK 3 2 4.9982 - 3.9681 1.00 2624 118 0.1476 0.1890 REMARK 3 3 3.9681 - 3.4667 1.00 2586 127 0.1803 0.2702 REMARK 3 4 3.4667 - 3.1498 1.00 2549 146 0.1875 0.2556 REMARK 3 5 3.1498 - 2.9241 1.00 2518 155 0.2339 0.3073 REMARK 3 6 2.9241 - 2.7518 1.00 2518 134 0.2586 0.3097 REMARK 3 7 2.7518 - 2.6140 1.00 2515 134 0.3467 0.3834 REMARK 3 8 2.6140 - 2.5002 1.00 2520 144 0.3680 0.4047 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.20 REMARK 3 SHRINKAGE RADIUS : 0.98 REMARK 3 K_SOL : 0.34 REMARK 3 B_SOL : 52.78 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.480 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.090 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.17950 REMARK 3 B22 (A**2) : 2.17950 REMARK 3 B33 (A**2) : 2.68710 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 3911 REMARK 3 ANGLE : 1.133 5296 REMARK 3 CHIRALITY : 0.083 598 REMARK 3 PLANARITY : 0.004 677 REMARK 3 DIHEDRAL : 16.555 1480 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 32:75) REMARK 3 ORIGIN FOR THE GROUP (A): 19.1174 9.0769 -14.9933 REMARK 3 T TENSOR REMARK 3 T11: 0.6968 T22: 0.6922 REMARK 3 T33: 0.4505 T12: -0.0414 REMARK 3 T13: -0.1119 T23: 0.0644 REMARK 3 L TENSOR REMARK 3 L11: 1.0179 L22: 0.4372 REMARK 3 L33: 0.5685 L12: -0.2645 REMARK 3 L13: -0.0755 L23: 0.2797 REMARK 3 S TENSOR REMARK 3 S11: 0.3604 S12: -0.2526 S13: -0.5971 REMARK 3 S21: 0.5237 S22: 0.1933 S23: -0.6218 REMARK 3 S31: 0.8022 S32: 0.5621 S33: 0.0005 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 76:219) REMARK 3 ORIGIN FOR THE GROUP (A): 11.8621 11.4267 -46.2140 REMARK 3 T TENSOR REMARK 3 T11: 0.3260 T22: 0.4552 REMARK 3 T33: 0.3814 T12: 0.0396 REMARK 3 T13: 0.0804 T23: -0.0684 REMARK 3 L TENSOR REMARK 3 L11: 1.4322 L22: 1.7779 REMARK 3 L33: 1.2092 L12: 0.9878 REMARK 3 L13: -0.6036 L23: 0.0268 REMARK 3 S TENSOR REMARK 3 S11: -0.1424 S12: 0.2430 S13: -0.1281 REMARK 3 S21: -0.2071 S22: 0.0939 S23: 0.0029 REMARK 3 S31: 0.2306 S32: -0.0313 S33: -0.0002 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 220:329) REMARK 3 ORIGIN FOR THE GROUP (A): 19.9859 29.8387 -42.2741 REMARK 3 T TENSOR REMARK 3 T11: 0.2751 T22: 0.4185 REMARK 3 T33: 0.3194 T12: 0.0051 REMARK 3 T13: -0.0166 T23: 0.0052 REMARK 3 L TENSOR REMARK 3 L11: 0.9804 L22: 1.5827 REMARK 3 L33: 0.5553 L12: 1.2436 REMARK 3 L13: -0.5762 L23: 0.0863 REMARK 3 S TENSOR REMARK 3 S11: -0.1419 S12: 0.2447 S13: -0.0208 REMARK 3 S21: -0.1662 S22: 0.0973 S23: 0.1032 REMARK 3 S31: -0.1073 S32: 0.2191 S33: -0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 330:377) REMARK 3 ORIGIN FOR THE GROUP (A): 23.6058 46.5485 -38.4926 REMARK 3 T TENSOR REMARK 3 T11: 0.5300 T22: 0.4472 REMARK 3 T33: 0.5601 T12: -0.0584 REMARK 3 T13: 0.0494 T23: 0.1065 REMARK 3 L TENSOR REMARK 3 L11: 0.4442 L22: 0.5536 REMARK 3 L33: 0.5851 L12: 0.5913 REMARK 3 L13: 0.4364 L23: 0.4466 REMARK 3 S TENSOR REMARK 3 S11: 0.2276 S12: 0.1633 S13: 0.9214 REMARK 3 S21: -0.0341 S22: 0.0378 S23: 0.0268 REMARK 3 S31: -0.4599 S32: 0.4522 S33: 0.0002 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ -1:36) REMARK 3 ORIGIN FOR THE GROUP (A): 0.8491 20.2109 -10.6491 REMARK 3 T TENSOR REMARK 3 T11: 0.3174 T22: 0.4542 REMARK 3 T33: 0.2475 T12: -0.0384 REMARK 3 T13: 0.0006 T23: -0.0597 REMARK 3 L TENSOR REMARK 3 L11: 0.8661 L22: 0.5121 REMARK 3 L33: 0.0793 L12: -0.6803 REMARK 3 L13: -0.1926 L23: 0.0551 REMARK 3 S TENSOR REMARK 3 S11: -0.0768 S12: 0.0095 S13: -0.1484 REMARK 3 S21: 0.4669 S22: -0.0090 S23: -0.2081 REMARK 3 S31: -0.1264 S32: 0.1571 S33: 0.0001 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 37:58) REMARK 3 ORIGIN FOR THE GROUP (A): -4.1703 10.6294 -8.8145 REMARK 3 T TENSOR REMARK 3 T11: 0.3926 T22: 0.5467 REMARK 3 T33: 0.3881 T12: 0.0005 REMARK 3 T13: 0.0335 T23: 0.0626 REMARK 3 L TENSOR REMARK 3 L11: 0.1797 L22: 0.3386 REMARK 3 L33: 0.2335 L12: -0.0964 REMARK 3 L13: -0.1741 L23: -0.1065 REMARK 3 S TENSOR REMARK 3 S11: -0.3016 S12: -0.7533 S13: -0.1881 REMARK 3 S21: 0.0858 S22: -0.0529 S23: -0.2403 REMARK 3 S31: -0.0010 S32: 0.4198 S33: -0.0001 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 59:76) REMARK 3 ORIGIN FOR THE GROUP (A): 9.8428 13.6475 -20.3581 REMARK 3 T TENSOR REMARK 3 T11: 0.4000 T22: 0.5192 REMARK 3 T33: 0.4303 T12: 0.0237 REMARK 3 T13: -0.0083 T23: -0.0019 REMARK 3 L TENSOR REMARK 3 L11: 0.3015 L22: 0.2946 REMARK 3 L33: 0.4037 L12: -0.2643 REMARK 3 L13: 0.0017 L23: 0.1396 REMARK 3 S TENSOR REMARK 3 S11: 0.0166 S12: 0.2773 S13: -0.2946 REMARK 3 S21: 0.6005 S22: -0.0199 S23: -0.2352 REMARK 3 S31: -0.1748 S32: 0.1434 S33: -0.0002 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 77:104) REMARK 3 ORIGIN FOR THE GROUP (A): 1.6573 21.1847 -26.5547 REMARK 3 T TENSOR REMARK 3 T11: 0.3049 T22: 0.4989 REMARK 3 T33: 0.4229 T12: 0.0247 REMARK 3 T13: 0.0396 T23: -0.0348 REMARK 3 L TENSOR REMARK 3 L11: 0.2908 L22: 0.4016 REMARK 3 L33: 0.3225 L12: 0.2605 REMARK 3 L13: -0.0918 L23: 0.3329 REMARK 3 S TENSOR REMARK 3 S11: -0.0669 S12: -0.0979 S13: 0.1998 REMARK 3 S21: -0.2490 S22: 0.1727 S23: -0.2067 REMARK 3 S31: -0.0847 S32: 0.1160 S33: -0.0001 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 105:131) REMARK 3 ORIGIN FOR THE GROUP (A): -3.1078 30.4940 -21.7830 REMARK 3 T TENSOR REMARK 3 T11: 0.3899 T22: 0.4896 REMARK 3 T33: 0.4639 T12: 0.0671 REMARK 3 T13: 0.0948 T23: -0.0525 REMARK 3 L TENSOR REMARK 3 L11: 1.1337 L22: 0.2318 REMARK 3 L33: 0.4927 L12: 0.3643 REMARK 3 L13: -0.4176 L23: -0.3702 REMARK 3 S TENSOR REMARK 3 S11: 0.3528 S12: 0.1055 S13: 0.1767 REMARK 3 S21: -0.0240 S22: -0.4029 S23: 0.4580 REMARK 3 S31: -0.0296 S32: -0.4656 S33: -0.0037 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 132:148) REMARK 3 ORIGIN FOR THE GROUP (A): -6.7770 30.7928 -30.2499 REMARK 3 T TENSOR REMARK 3 T11: 0.4152 T22: 0.5687 REMARK 3 T33: 0.5820 T12: 0.0980 REMARK 3 T13: -0.0472 T23: 0.0194 REMARK 3 L TENSOR REMARK 3 L11: 0.1039 L22: 0.1726 REMARK 3 L33: 0.3564 L12: -0.0274 REMARK 3 L13: -0.0196 L23: -0.2749 REMARK 3 S TENSOR REMARK 3 S11: -0.1122 S12: 0.3040 S13: 0.4517 REMARK 3 S21: -0.9953 S22: -0.2560 S23: 0.5838 REMARK 3 S31: -0.0183 S32: -0.0038 S33: -0.0001 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 149:164) REMARK 3 ORIGIN FOR THE GROUP (A): -9.1804 24.5851 -18.8619 REMARK 3 T TENSOR REMARK 3 T11: 0.3388 T22: 0.4714 REMARK 3 T33: 0.4912 T12: -0.0446 REMARK 3 T13: 0.0874 T23: -0.1508 REMARK 3 L TENSOR REMARK 3 L11: 0.0647 L22: 0.2244 REMARK 3 L33: 0.2060 L12: -0.0807 REMARK 3 L13: 0.0160 L23: -0.2046 REMARK 3 S TENSOR REMARK 3 S11: -0.1424 S12: -0.0815 S13: 0.5923 REMARK 3 S21: 0.1533 S22: -0.1700 S23: 0.7218 REMARK 3 S31: -0.2435 S32: -0.3499 S33: -0.0030 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 165:177) REMARK 3 ORIGIN FOR THE GROUP (A): -12.0532 15.0099 -15.7053 REMARK 3 T TENSOR REMARK 3 T11: 0.2491 T22: 0.6944 REMARK 3 T33: 0.5371 T12: -0.0749 REMARK 3 T13: 0.2046 T23: -0.1167 REMARK 3 L TENSOR REMARK 3 L11: 0.4480 L22: 2.6879 REMARK 3 L33: 2.1408 L12: 0.8447 REMARK 3 L13: 0.4824 L23: 2.3036 REMARK 3 S TENSOR REMARK 3 S11: -0.3035 S12: 0.0981 S13: 0.5532 REMARK 3 S21: -0.7623 S22: -0.4031 S23: 1.0664 REMARK 3 S31: -1.0165 S32: -0.2774 S33: -0.0818 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4YC7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 19-FEB-15. REMARK 100 THE DEPOSITION ID IS D_1000207191. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-JUL-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22213 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 43.400 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 14.10 REMARK 200 R MERGE (I) : 0.05300 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 25.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 14.70 REMARK 200 R MERGE FOR SHELL (I) : 0.33600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 4.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: PDB ACCESSION CODE 3EG5, CHAIN A REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.33 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20 MM TRIS/HCL (PH 8.0), 14% (V/V) PEG REMARK 280 3350, 0.25 M MAGNESIUM ACETATE, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 72.13750 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 45.54700 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 45.54700 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 36.06875 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 45.54700 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 45.54700 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 108.20625 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 45.54700 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 45.54700 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 36.06875 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 45.54700 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 45.54700 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 108.20625 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 72.13750 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4040 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22520 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -19.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY B -1 REMARK 465 ALA B 0 REMARK 465 MET B 1 REMARK 465 GLY B 2 REMARK 465 ASN B 3 REMARK 465 ALA B 4 REMARK 465 GLY B 5 REMARK 465 SER B 6 REMARK 465 MET B 7 REMARK 465 ASP B 8 REMARK 465 SER B 9 REMARK 465 GLN B 10 REMARK 465 GLN B 11 REMARK 465 THR B 12 REMARK 465 ASP B 13 REMARK 465 PHE B 14 REMARK 465 ARG B 15 REMARK 465 ALA B 16 REMARK 465 HIS B 17 REMARK 465 ASN B 18 REMARK 465 VAL B 19 REMARK 465 PRO B 20 REMARK 465 LEU B 21 REMARK 465 LYS B 22 REMARK 465 LEU B 23 REMARK 465 PRO B 24 REMARK 465 MET B 25 REMARK 465 PRO B 26 REMARK 465 GLU B 27 REMARK 465 PRO B 28 REMARK 465 GLY B 29 REMARK 465 GLU B 30 REMARK 465 LEU B 31 REMARK 465 ASP B 150 REMARK 465 PHE B 151 REMARK 465 GLU B 152 REMARK 465 SER B 153 REMARK 465 VAL B 154 REMARK 465 GLU B 155 REMARK 465 SER B 156 REMARK 465 THR B 157 REMARK 465 VAL B 158 REMARK 465 GLU B 159 REMARK 465 SER B 160 REMARK 465 SER B 161 REMARK 465 VAL B 162 REMARK 465 ASP B 163 REMARK 465 LYS B 164 REMARK 465 SER B 165 REMARK 465 LYS B 166 REMARK 465 PRO B 167 REMARK 465 TRP B 168 REMARK 465 SER B 169 REMARK 465 ARG B 170 REMARK 465 SER B 171 REMARK 465 ILE B 172 REMARK 465 GLU B 173 REMARK 465 ASP B 174 REMARK 465 LEU B 175 REMARK 465 HIS B 176 REMARK 465 ARG B 177 REMARK 465 GLY B 178 REMARK 465 SER B 179 REMARK 465 ASN B 180 REMARK 465 LEU B 181 REMARK 465 PRO B 182 REMARK 465 SER B 183 REMARK 465 PRO B 184 REMARK 465 VAL B 185 REMARK 465 GLY B 186 REMARK 465 ASN B 187 REMARK 465 SER B 188 REMARK 465 VAL B 189 REMARK 465 SER B 190 REMARK 465 ARG B 191 REMARK 465 SER B 192 REMARK 465 GLY B 193 REMARK 465 ARG B 194 REMARK 465 HIS B 195 REMARK 465 SER B 196 REMARK 465 ALA B 197 REMARK 465 LEU B 198 REMARK 465 ARG B 199 REMARK 465 TYR B 200 REMARK 465 ASN B 201 REMARK 465 THR B 202 REMARK 465 LEU B 203 REMARK 465 PRO B 204 REMARK 465 VAL B 378 REMARK 465 GLY B 379 REMARK 465 GLY A -2 REMARK 465 PRO A 178 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP B 377 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O2B GNP A 201 O HOH A 315 1.80 REMARK 500 O2G GNP A 201 O HOH A 315 1.85 REMARK 500 O HOH B 417 O HOH A 327 2.12 REMARK 500 OG1 THR A 34 O HOH A 315 2.13 REMARK 500 NH1 ARG B 308 O LEU B 347 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 35 -66.47 -103.51 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 202 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 16 OG1 REMARK 620 2 VAL A 32 O 122.9 REMARK 620 3 GNP A 201 O2G 84.3 109.4 REMARK 620 4 GNP A 201 O2B 60.8 161.0 51.6 REMARK 620 5 GNP A 201 O2A 109.3 113.5 114.2 79.2 REMARK 620 6 HOH A 315 O 46.0 128.4 38.6 38.0 117.0 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GNP A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 202 DBREF 4YC7 B 1 379 UNP Q96PY5 FMNL2_HUMAN 1 379 DBREF 4YC7 A 0 178 UNP P60953 CDC42_HUMAN 1 179 SEQADV 4YC7 GLY B -1 UNP Q96PY5 EXPRESSION TAG SEQADV 4YC7 ALA B 0 UNP Q96PY5 EXPRESSION TAG SEQADV 4YC7 GLY A -2 UNP P60953 EXPRESSION TAG SEQADV 4YC7 ALA A -1 UNP P60953 EXPRESSION TAG SEQRES 1 B 381 GLY ALA MET GLY ASN ALA GLY SER MET ASP SER GLN GLN SEQRES 2 B 381 THR ASP PHE ARG ALA HIS ASN VAL PRO LEU LYS LEU PRO SEQRES 3 B 381 MET PRO GLU PRO GLY GLU LEU GLU GLU ARG PHE ALA ILE SEQRES 4 B 381 VAL LEU ASN ALA MET ASN LEU PRO PRO ASP LYS ALA ARG SEQRES 5 B 381 LEU LEU ARG GLN TYR ASP ASN GLU LYS LYS TRP GLU LEU SEQRES 6 B 381 ILE CYS ASP GLN GLU ARG PHE GLN VAL LYS ASN PRO PRO SEQRES 7 B 381 HIS THR TYR ILE GLN LYS LEU LYS GLY TYR LEU ASP PRO SEQRES 8 B 381 ALA VAL THR ARG LYS LYS PHE ARG ARG ARG VAL GLN GLU SEQRES 9 B 381 SER THR GLN VAL LEU ARG GLU LEU GLU ILE SER LEU ARG SEQRES 10 B 381 THR ASN HIS ILE GLY TRP VAL ARG GLU PHE LEU ASN GLU SEQRES 11 B 381 GLU ASN LYS GLY LEU ASP VAL LEU VAL GLU TYR LEU SER SEQRES 12 B 381 PHE ALA GLN TYR ALA VAL THR PHE ASP PHE GLU SER VAL SEQRES 13 B 381 GLU SER THR VAL GLU SER SER VAL ASP LYS SER LYS PRO SEQRES 14 B 381 TRP SER ARG SER ILE GLU ASP LEU HIS ARG GLY SER ASN SEQRES 15 B 381 LEU PRO SER PRO VAL GLY ASN SER VAL SER ARG SER GLY SEQRES 16 B 381 ARG HIS SER ALA LEU ARG TYR ASN THR LEU PRO SER ARG SEQRES 17 B 381 ARG THR LEU LYS ASN SER ARG LEU VAL SER LYS LYS ASP SEQRES 18 B 381 ASP VAL HIS VAL CYS ILE MET CYS LEU ARG ALA ILE MET SEQRES 19 B 381 ASN TYR GLN TYR GLY PHE ASN MET VAL MET SER HIS PRO SEQRES 20 B 381 HIS ALA VAL ASN GLU ILE ALA LEU SER LEU ASN ASN LYS SEQRES 21 B 381 ASN PRO ARG THR LYS ALA LEU VAL LEU GLU LEU LEU ALA SEQRES 22 B 381 ALA VAL CYS LEU VAL ARG GLY GLY HIS GLU ILE ILE LEU SEQRES 23 B 381 SER ALA PHE ASP ASN PHE LYS GLU VAL CYS GLY GLU LYS SEQRES 24 B 381 GLN ARG PHE GLU LYS LEU MET GLU HIS PHE ARG ASN GLU SEQRES 25 B 381 ASP ASN ASN ILE ASP PHE MET VAL ALA SER MET GLN PHE SEQRES 26 B 381 ILE ASN ILE VAL VAL HIS SER VAL GLU ASP MET ASN PHE SEQRES 27 B 381 ARG VAL HIS LEU GLN TYR GLU PHE THR LYS LEU GLY LEU SEQRES 28 B 381 ASP GLU TYR LEU ASP LYS LEU LYS HIS THR GLU SER ASP SEQRES 29 B 381 LYS LEU GLN VAL GLN ILE GLN ALA TYR LEU ASP ASN VAL SEQRES 30 B 381 PHE ASP VAL GLY SEQRES 1 A 181 GLY ALA MET GLN THR ILE LYS CYS VAL VAL VAL GLY ASP SEQRES 2 A 181 GLY ALA VAL GLY LYS THR CYS LEU LEU ILE SER TYR THR SEQRES 3 A 181 THR ASN LYS PHE PRO SER GLU TYR VAL PRO THR VAL PHE SEQRES 4 A 181 ASP ASN TYR ALA VAL THR VAL MET ILE GLY GLY GLU PRO SEQRES 5 A 181 TYR THR LEU GLY LEU PHE ASP THR ALA GLY GLN GLU ASP SEQRES 6 A 181 TYR ASP ARG LEU ARG PRO LEU SER TYR PRO GLN THR ASP SEQRES 7 A 181 VAL PHE LEU VAL CYS PHE SER VAL VAL SER PRO SER SER SEQRES 8 A 181 PHE GLU ASN VAL LYS GLU LYS TRP VAL PRO GLU ILE THR SEQRES 9 A 181 HIS HIS CYS PRO LYS THR PRO PHE LEU LEU VAL GLY THR SEQRES 10 A 181 GLN ILE ASP LEU ARG ASP ASP PRO SER THR ILE GLU LYS SEQRES 11 A 181 LEU ALA LYS ASN LYS GLN LYS PRO ILE THR PRO GLU THR SEQRES 12 A 181 ALA GLU LYS LEU ALA ARG ASP LEU LYS ALA VAL LYS TYR SEQRES 13 A 181 VAL GLU CYS SER ALA LEU THR GLN ARG GLY LEU LYS ASN SEQRES 14 A 181 VAL PHE ASP GLU ALA ILE LEU ALA ALA LEU GLU PRO HET GNP A 201 32 HET MG A 202 1 HETNAM GNP PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER HETNAM MG MAGNESIUM ION FORMUL 3 GNP C10 H17 N6 O13 P3 FORMUL 4 MG MG 2+ FORMUL 5 HOH *63(H2 O) HELIX 1 AA1 LEU B 39 ASN B 43 5 5 HELIX 2 AA2 PRO B 45 GLN B 54 1 10 HELIX 3 AA3 ASP B 56 PHE B 70 1 15 HELIX 4 AA4 PRO B 75 ASP B 88 1 14 HELIX 5 AA5 THR B 92 VAL B 100 1 9 HELIX 6 AA6 GLU B 102 ASN B 117 1 16 HELIX 7 AA7 HIS B 118 ASN B 127 1 10 HELIX 8 AA8 LYS B 131 ALA B 146 1 16 HELIX 9 AA9 ARG B 206 LYS B 217 1 12 HELIX 10 AB1 ASP B 219 ASN B 233 1 15 HELIX 11 AB2 TYR B 234 HIS B 244 1 11 HELIX 12 AB3 HIS B 246 SER B 254 1 9 HELIX 13 AB4 LEU B 255 ASN B 257 5 3 HELIX 14 AB5 ASN B 259 VAL B 276 1 18 HELIX 15 AB6 GLY B 278 GLY B 295 1 18 HELIX 16 AB7 PHE B 300 GLU B 310 1 11 HELIX 17 AB8 ASN B 313 SER B 330 1 18 HELIX 18 AB9 ASP B 333 LEU B 347 1 15 HELIX 19 AC1 GLY B 348 LYS B 357 1 10 HELIX 20 AC2 SER B 361 VAL B 375 1 15 HELIX 21 AC3 GLY A 14 ASN A 25 1 12 HELIX 22 AC4 GLN A 60 ASP A 64 5 5 HELIX 23 AC5 LEU A 66 TYR A 71 5 6 HELIX 24 AC6 SER A 85 LYS A 95 1 11 HELIX 25 AC7 LYS A 95 CYS A 104 1 10 HELIX 26 AC8 GLN A 115 ASP A 120 5 6 HELIX 27 AC9 ASP A 121 ASN A 131 1 11 HELIX 28 AD1 THR A 137 LEU A 148 1 12 HELIX 29 AD2 GLY A 163 GLU A 177 1 15 SHEET 1 AA1 6 PHE A 36 ILE A 45 0 SHEET 2 AA1 6 GLU A 48 THR A 57 -1 O LEU A 52 N VAL A 41 SHEET 3 AA1 6 GLN A 1 GLY A 9 1 N ILE A 3 O GLY A 53 SHEET 4 AA1 6 VAL A 76 SER A 82 1 O CYS A 80 N VAL A 8 SHEET 5 AA1 6 PHE A 109 THR A 114 1 O THR A 114 N PHE A 81 SHEET 6 AA1 6 TYR A 153 GLU A 155 1 O VAL A 154 N LEU A 111 LINK OG1 THR A 16 MG MG A 202 1555 1555 2.81 LINK O VAL A 32 MG MG A 202 1555 1555 2.91 LINK O2G GNP A 201 MG MG A 202 1555 1555 2.77 LINK O2B GNP A 201 MG MG A 202 1555 1555 2.68 LINK O2A GNP A 201 MG MG A 202 1555 1555 2.90 LINK MG MG A 202 O HOH A 315 1555 1555 2.84 SITE 1 AC1 22 GLY A 11 ALA A 12 VAL A 13 GLY A 14 SITE 2 AC1 22 LYS A 15 THR A 16 CYS A 17 PHE A 27 SITE 3 AC1 22 TYR A 31 PRO A 33 THR A 34 GLY A 59 SITE 4 AC1 22 GLN A 115 ASP A 117 LEU A 118 SER A 157 SITE 5 AC1 22 ALA A 158 LEU A 159 MG A 202 HOH A 307 SITE 6 AC1 22 HOH A 315 HOH A 324 SITE 1 AC2 5 THR A 16 VAL A 32 THR A 34 GNP A 201 SITE 2 AC2 5 HOH A 315 CRYST1 91.094 91.094 144.275 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010978 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010978 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006931 0.00000