PDB Short entry for 5A63 HEADER HYDROLASE 24-JUN-15 5A63 TITLE CRYO-EM STRUCTURE OF THE HUMAN GAMMA-SECRETASE COMPLEX AT 3.4 ANGSTROM TITLE 2 RESOLUTION. COMPND MOL_ID: 1; COMPND 2 MOLECULE: NICASTRIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: PRESENILIN-1; COMPND 7 CHAIN: B; COMPND 8 SYNONYM: PS-1,PROTEIN S182; COMPND 9 EC: 3.4.23.-; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: GAMMA-SECRETASE SUBUNIT APH-1A; COMPND 13 CHAIN: C; COMPND 14 SYNONYM: APH-1A,APH-1ALPHA,PRESENILIN-STABILIZATION FACTOR; COMPND 15 ENGINEERED: YES; COMPND 16 MOL_ID: 4; COMPND 17 MOLECULE: GAMMA-SECRETASE SUBUNIT PEN-2; COMPND 18 CHAIN: D; COMPND 19 SYNONYM: PRESENILIN ENHANCER PROTEIN 2; COMPND 20 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 CELL_LINE: HEK 293F; SOURCE 6 GENE: NCSTN, KIAA0253, UNQ1874/PRO4317; SOURCE 7 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 8 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 10 EXPRESSION_SYSTEM_CELL_LINE: HEK 293F; SOURCE 11 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 12 EXPRESSION_SYSTEM_VECTOR: PMLINK; SOURCE 13 MOL_ID: 2; SOURCE 14 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 15 ORGANISM_COMMON: HUMAN; SOURCE 16 ORGANISM_TAXID: 9606; SOURCE 17 CELL_LINE: HEK 293F; SOURCE 18 GENE: PSEN1, AD3, PS1, PSNL1; SOURCE 19 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 20 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 21 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 22 EXPRESSION_SYSTEM_CELL_LINE: HEK 293F; SOURCE 23 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 24 EXPRESSION_SYSTEM_VECTOR: PMLINK; SOURCE 25 MOL_ID: 3; SOURCE 26 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 27 ORGANISM_COMMON: HUMAN; SOURCE 28 ORGANISM_TAXID: 9606; SOURCE 29 CELL_LINE: HEK 293F; SOURCE 30 GENE: APH1A, PSF, CGI-78, UNQ579/PRO1141; SOURCE 31 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 32 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 33 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 34 EXPRESSION_SYSTEM_CELL_LINE: HEK 293F; SOURCE 35 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 36 EXPRESSION_SYSTEM_VECTOR: PMLINK; SOURCE 37 MOL_ID: 4; SOURCE 38 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 39 ORGANISM_COMMON: HUMAN; SOURCE 40 ORGANISM_TAXID: 9606; SOURCE 41 CELL_LINE: HEK 293F; SOURCE 42 GENE: PSENEN, PEN2, MDS033; SOURCE 43 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 44 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 45 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 46 EXPRESSION_SYSTEM_CELL_LINE: HEK 293F; SOURCE 47 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 48 EXPRESSION_SYSTEM_VECTOR: PMLINK KEYWDS HYDROLASE, CRYO-EM, HUMAN GAMMA-SECRETASE, MEMBRANE PROTEIN EXPDTA ELECTRON MICROSCOPY AUTHOR X.BAI,C.YAN,G.YANG,P.LU,D.MA,L.SUN,R.ZHOU,S.H.W.SCHERES,Y.SHI REVDAT 8 29-JUL-20 5A63 1 COMPND REMARK HETNAM LINK REVDAT 8 2 1 SITE ATOM REVDAT 7 11-SEP-19 5A63 1 COMPND SOURCE DBREF LINK REVDAT 6 02-AUG-17 5A63 1 REVDAT 5 28-DEC-16 5A63 1 SPRSDE REVDAT 4 16-SEP-15 5A63 1 AUTHOR JRNL REVDAT 3 26-AUG-15 5A63 1 JRNL REVDAT 2 19-AUG-15 5A63 1 JRNL REVDAT 1 05-AUG-15 5A63 0 SPRSDE 28-DEC-16 5A63 4UPC JRNL AUTH X.BAI,C.YAN,G.YANG,P.LU,D.MA,L.SUN,R.ZHOU,S.H.W.SCHERES, JRNL AUTH 2 Y.SHI JRNL TITL AN ATOMIC STRUCTURE OF HUMAN GAMMA-SECRETASE JRNL REF NATURE V. 525 212 2015 JRNL REFN ISSN 0028-0836 JRNL PMID 26280335 JRNL DOI 10.1038/NATURE14892 REMARK 2 REMARK 2 RESOLUTION. 3.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : CTFFIND, RELION REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.400 REMARK 3 NUMBER OF PARTICLES : 159549 REMARK 3 CTF CORRECTION METHOD : NULL REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: CROSS- -CORRELATION REMARK 3 DENSITIES WITHIN SPHERICAL SHELL REMARK 3 REMARK 3 OTHER DETAILS: SUBMISSION BASED ON EXPERIMENTAL DATA FROM EMDB EMD REMARK 3 -3061. (DEPOSITION ID: 13527). REMARK 4 REMARK 4 5A63 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE. REMARK 100 THE DEPOSITION ID IS D_1290064164. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : CRYO EM REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : HUMAN GAMMA-SECRETASE REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 6.00 REMARK 245 SAMPLE SUPPORT DETAILS : HOLEY CARBON REMARK 245 SAMPLE VITRIFICATION DETAILS : VITRIFICATION 1 -- CRYOGEN- REMARK 245 ETHANE, HUMIDITY- 100, REMARK 245 TEMPERATURE- 85, INSTRUMENT- REMARK 245 FEI VITROBOT MARK IV, METHOD- REMARK 245 BLOT FOR 4 SECONDS BEFORE REMARK 245 PLUNGING, REMARK 245 SAMPLE BUFFER : 25 MM HEPES, PH 7.4, 150 MM REMARK 245 NACL AND AMPHIPOL A8-35 REMARK 245 PH : 7.40 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : 02-OCT-14 REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : 85.00 REMARK 245 MICROSCOPE MODEL : FEI TECNAI F30 REMARK 245 DETECTOR TYPE : GATAN K2 (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 700.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 3200.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : 2.70 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 38.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : 81000 REMARK 245 CALIBRATED MAGNIFICATION : 35714 REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F, G, H, I, J REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 THR A 3 REMARK 465 ALA A 4 REMARK 465 GLY A 5 REMARK 465 GLY A 6 REMARK 465 GLY A 7 REMARK 465 SER A 8 REMARK 465 GLY A 9 REMARK 465 ALA A 10 REMARK 465 ASP A 11 REMARK 465 PRO A 12 REMARK 465 GLY A 13 REMARK 465 SER A 14 REMARK 465 ARG A 15 REMARK 465 GLY A 16 REMARK 465 LEU A 17 REMARK 465 LEU A 18 REMARK 465 ARG A 19 REMARK 465 LEU A 20 REMARK 465 LEU A 21 REMARK 465 SER A 22 REMARK 465 PHE A 23 REMARK 465 CYS A 24 REMARK 465 VAL A 25 REMARK 465 LEU A 26 REMARK 465 LEU A 27 REMARK 465 ALA A 28 REMARK 465 GLY A 29 REMARK 465 LEU A 30 REMARK 465 CYS A 31 REMARK 465 ARG A 32 REMARK 465 GLY A 33 REMARK 465 ILE A 699 REMARK 465 ALA A 700 REMARK 465 PRO A 701 REMARK 465 ARG A 702 REMARK 465 GLU A 703 REMARK 465 PRO A 704 REMARK 465 GLY A 705 REMARK 465 ALA A 706 REMARK 465 VAL A 707 REMARK 465 SER A 708 REMARK 465 TYR A 709 REMARK 465 MET B 1 REMARK 465 THR B 2 REMARK 465 GLU B 3 REMARK 465 LEU B 4 REMARK 465 PRO B 5 REMARK 465 ALA B 6 REMARK 465 PRO B 7 REMARK 465 LEU B 8 REMARK 465 SER B 9 REMARK 465 TYR B 10 REMARK 465 PHE B 11 REMARK 465 GLN B 12 REMARK 465 ASN B 13 REMARK 465 ALA B 14 REMARK 465 GLN B 15 REMARK 465 MET B 16 REMARK 465 SER B 17 REMARK 465 GLU B 18 REMARK 465 ASP B 19 REMARK 465 ASN B 20 REMARK 465 HIS B 21 REMARK 465 LEU B 22 REMARK 465 SER B 23 REMARK 465 ASN B 24 REMARK 465 THR B 25 REMARK 465 VAL B 26 REMARK 465 ARG B 27 REMARK 465 SER B 28 REMARK 465 GLN B 29 REMARK 465 ASN B 30 REMARK 465 ASP B 31 REMARK 465 ASN B 32 REMARK 465 ARG B 33 REMARK 465 GLU B 34 REMARK 465 ARG B 35 REMARK 465 GLN B 36 REMARK 465 GLU B 37 REMARK 465 HIS B 38 REMARK 465 ASN B 39 REMARK 465 ASP B 40 REMARK 465 ARG B 41 REMARK 465 ARG B 42 REMARK 465 SER B 43 REMARK 465 LEU B 44 REMARK 465 GLY B 45 REMARK 465 HIS B 46 REMARK 465 PRO B 47 REMARK 465 GLU B 48 REMARK 465 PRO B 49 REMARK 465 LEU B 50 REMARK 465 SER B 51 REMARK 465 ASN B 52 REMARK 465 GLY B 53 REMARK 465 ARG B 54 REMARK 465 PRO B 55 REMARK 465 GLN B 56 REMARK 465 GLY B 57 REMARK 465 ASN B 58 REMARK 465 SER B 59 REMARK 465 ARG B 60 REMARK 465 GLN B 61 REMARK 465 VAL B 62 REMARK 465 VAL B 63 REMARK 465 GLU B 64 REMARK 465 GLN B 65 REMARK 465 ASP B 66 REMARK 465 GLU B 67 REMARK 465 GLU B 68 REMARK 465 GLU B 69 REMARK 465 ASP B 70 REMARK 465 GLU B 71 REMARK 465 GLU B 72 REMARK 465 LEU B 73 REMARK 465 THR B 74 REMARK 465 LEU B 75 REMARK 465 LYS B 76 REMARK 465 TYR B 77 REMARK 465 LYS B 109 REMARK 465 ASP B 110 REMARK 465 GLY B 111 REMARK 465 GLN B 112 REMARK 465 LEU B 113 REMARK 465 ILE B 114 REMARK 465 TYR B 115 REMARK 465 THR B 116 REMARK 465 PRO B 117 REMARK 465 PHE B 118 REMARK 465 THR B 119 REMARK 465 GLU B 120 REMARK 465 ASP B 121 REMARK 465 THR B 122 REMARK 465 GLU B 123 REMARK 465 THR B 124 REMARK 465 VAL B 125 REMARK 465 GLY B 126 REMARK 465 GLN B 127 REMARK 465 ARG B 128 REMARK 465 ALA B 129 REMARK 465 LEU B 130 REMARK 465 HIS B 131 REMARK 465 SER B 132 REMARK 465 ILE B 133 REMARK 465 LEU B 134 REMARK 465 ASN B 135 REMARK 465 ALA B 136 REMARK 465 ALA B 137 REMARK 465 ILE B 138 REMARK 465 MET B 139 REMARK 465 ILE B 140 REMARK 465 SER B 141 REMARK 465 VAL B 142 REMARK 465 ILE B 143 REMARK 465 VAL B 144 REMARK 465 VAL B 145 REMARK 465 MET B 146 REMARK 465 THR B 147 REMARK 465 ILE B 148 REMARK 465 LEU B 149 REMARK 465 LEU B 150 REMARK 465 VAL B 151 REMARK 465 VAL B 152 REMARK 465 LEU B 153 REMARK 465 TYR B 154 REMARK 465 LYS B 155 REMARK 465 TYR B 156 REMARK 465 ARG B 157 REMARK 465 CYS B 158 REMARK 465 TYR B 159 REMARK 465 LYS B 160 REMARK 465 VAL B 161 REMARK 465 ILE B 162 REMARK 465 HIS B 163 REMARK 465 ALA B 164 REMARK 465 TRP B 165 REMARK 465 LEU B 166 REMARK 465 LEU B 262 REMARK 465 CYS B 263 REMARK 465 PRO B 264 REMARK 465 LYS B 265 REMARK 465 GLY B 266 REMARK 465 PRO B 267 REMARK 465 LEU B 268 REMARK 465 ARG B 269 REMARK 465 MET B 270 REMARK 465 LEU B 271 REMARK 465 VAL B 272 REMARK 465 GLU B 273 REMARK 465 THR B 274 REMARK 465 ALA B 275 REMARK 465 GLN B 276 REMARK 465 GLU B 277 REMARK 465 ARG B 278 REMARK 465 ASN B 279 REMARK 465 GLU B 280 REMARK 465 THR B 281 REMARK 465 LEU B 282 REMARK 465 PHE B 283 REMARK 465 PRO B 284 REMARK 465 ALA B 285 REMARK 465 LEU B 286 REMARK 465 ILE B 287 REMARK 465 TYR B 288 REMARK 465 SER B 289 REMARK 465 SER B 290 REMARK 465 THR B 291 REMARK 465 MET B 292 REMARK 465 VAL B 293 REMARK 465 TRP B 294 REMARK 465 LEU B 295 REMARK 465 VAL B 296 REMARK 465 ASN B 297 REMARK 465 MET B 298 REMARK 465 ALA B 299 REMARK 465 GLU B 300 REMARK 465 GLY B 301 REMARK 465 ASP B 302 REMARK 465 PRO B 303 REMARK 465 GLU B 304 REMARK 465 ALA B 305 REMARK 465 GLN B 306 REMARK 465 ARG B 307 REMARK 465 ARG B 308 REMARK 465 VAL B 309 REMARK 465 SER B 310 REMARK 465 LYS B 311 REMARK 465 ASN B 312 REMARK 465 SER B 313 REMARK 465 LYS B 314 REMARK 465 TYR B 315 REMARK 465 ASN B 316 REMARK 465 ALA B 317 REMARK 465 GLU B 318 REMARK 465 SER B 319 REMARK 465 THR B 320 REMARK 465 GLU B 321 REMARK 465 ARG B 322 REMARK 465 GLU B 323 REMARK 465 SER B 324 REMARK 465 GLN B 325 REMARK 465 ASP B 326 REMARK 465 THR B 327 REMARK 465 VAL B 328 REMARK 465 ALA B 329 REMARK 465 GLU B 330 REMARK 465 ASN B 331 REMARK 465 ASP B 332 REMARK 465 ASP B 333 REMARK 465 GLY B 334 REMARK 465 GLY B 335 REMARK 465 PHE B 336 REMARK 465 SER B 337 REMARK 465 GLU B 338 REMARK 465 GLU B 339 REMARK 465 TRP B 340 REMARK 465 GLU B 341 REMARK 465 ALA B 342 REMARK 465 GLN B 343 REMARK 465 ARG B 344 REMARK 465 ASP B 345 REMARK 465 SER B 346 REMARK 465 HIS B 347 REMARK 465 LEU B 348 REMARK 465 GLY B 349 REMARK 465 PRO B 350 REMARK 465 HIS B 351 REMARK 465 ARG B 352 REMARK 465 SER B 353 REMARK 465 THR B 354 REMARK 465 PRO B 355 REMARK 465 GLU B 356 REMARK 465 SER B 357 REMARK 465 ARG B 358 REMARK 465 ALA B 359 REMARK 465 ALA B 360 REMARK 465 VAL B 361 REMARK 465 GLN B 362 REMARK 465 GLU B 363 REMARK 465 LEU B 364 REMARK 465 SER B 365 REMARK 465 SER B 366 REMARK 465 SER B 367 REMARK 465 ILE B 368 REMARK 465 LEU B 369 REMARK 465 ALA B 370 REMARK 465 GLY B 371 REMARK 465 GLU B 372 REMARK 465 ASP B 373 REMARK 465 PRO B 374 REMARK 465 GLU B 375 REMARK 465 GLU B 376 REMARK 465 ARG B 377 REMARK 465 GLY B 378 REMARK 465 MET C 1 REMARK 465 CYS C 245 REMARK 465 ARG C 246 REMARK 465 ARG C 247 REMARK 465 GLN C 248 REMARK 465 GLU C 249 REMARK 465 ASP C 250 REMARK 465 SER C 251 REMARK 465 ARG C 252 REMARK 465 VAL C 253 REMARK 465 MET C 254 REMARK 465 VAL C 255 REMARK 465 TYR C 256 REMARK 465 SER C 257 REMARK 465 ALA C 258 REMARK 465 LEU C 259 REMARK 465 ARG C 260 REMARK 465 ILE C 261 REMARK 465 PRO C 262 REMARK 465 PRO C 263 REMARK 465 GLU C 264 REMARK 465 ASP C 265 REMARK 465 MET D 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 SG CYS A 586 SG CYS A 620 1.12 REMARK 500 O4 NAG H 1 O5 NAG H 2 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 424 C - N - CD ANGL. DEV. = 12.7 DEGREES REMARK 500 PRO A 560 C - N - CD ANGL. DEV. = 13.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 45 -61.67 -94.20 REMARK 500 THR A 57 -74.62 -97.60 REMARK 500 SER A 67 76.23 57.10 REMARK 500 LYS A 78 172.26 179.97 REMARK 500 ASP A 88 -126.04 -84.05 REMARK 500 SER A 129 153.87 89.30 REMARK 500 TYR A 152 -84.85 -104.52 REMARK 500 GLN A 163 98.13 63.93 REMARK 500 HIS A 199 -63.72 -137.97 REMARK 500 SER A 206 -76.70 -146.12 REMARK 500 PHE A 210 43.69 -96.50 REMARK 500 PRO A 211 74.52 -105.77 REMARK 500 ALA A 223 145.77 89.48 REMARK 500 ILE A 225 -71.52 78.09 REMARK 500 ASN A 243 75.47 56.58 REMARK 500 THR A 265 -60.73 83.91 REMARK 500 ALA A 295 -73.25 -57.98 REMARK 500 ALA A 298 -54.35 -125.98 REMARK 500 ASP A 317 56.53 -90.93 REMARK 500 GLU A 333 -31.70 -33.00 REMARK 500 ASP A 336 69.03 -66.41 REMARK 500 PHE A 352 143.65 -176.24 REMARK 500 PRO A 353 -70.25 -58.53 REMARK 500 ARG A 371 95.34 44.97 REMARK 500 ARG A 434 -60.04 -121.37 REMARK 500 ASN A 435 127.60 100.62 REMARK 500 GLN A 454 74.05 11.99 REMARK 500 SER A 472 -57.26 -169.09 REMARK 500 PRO A 473 -125.76 -87.78 REMARK 500 VAL A 480 84.18 -65.78 REMARK 500 THR A 505 -9.63 75.97 REMARK 500 ILE A 527 -59.90 -131.18 REMARK 500 ASN A 530 92.32 -65.64 REMARK 500 SER A 536 4.30 -66.10 REMARK 500 SER A 559 -94.57 -24.97 REMARK 500 GLU A 595 88.81 66.74 REMARK 500 ASN A 612 -76.70 60.09 REMARK 500 SER A 646 103.40 84.08 REMARK 500 ASP A 655 88.11 55.86 REMARK 500 LYS A 693 47.50 -103.10 REMARK 500 SER B 104 -64.79 72.99 REMARK 500 PHE B 105 -48.83 -23.32 REMARK 500 ASN B 204 -72.61 -58.98 REMARK 500 TRP B 215 51.02 -158.98 REMARK 500 LYS B 216 -86.09 54.31 REMARK 500 ASP B 403 -73.13 53.90 REMARK 500 GLN B 464 -3.00 95.13 REMARK 500 ASP C 61 4.06 85.95 REMARK 500 ARG C 62 28.36 80.57 REMARK 500 ASP C 107 88.51 81.88 REMARK 500 REMARK 500 THIS ENTRY HAS 51 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLY A 68 ASP A 69 148.67 REMARK 500 PHE A 210 PRO A 211 142.45 REMARK 500 VAL A 256 TRP A 257 -146.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 PC1 B 1468 REMARK 610 PC1 C 1245 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-3061 RELATED DB: EMDB DBREF 5A63 A 1 709 UNP Q92542 NICA_HUMAN 1 709 DBREF 5A63 B 1 467 UNP P49768 PSN1_HUMAN 1 467 DBREF 5A63 C 1 265 UNP Q96BI3 APH1A_HUMAN 1 265 DBREF 5A63 D 1 101 UNP Q9NZ42 PEN2_HUMAN 1 101 SEQRES 1 A 709 MET ALA THR ALA GLY GLY GLY SER GLY ALA ASP PRO GLY SEQRES 2 A 709 SER ARG GLY LEU LEU ARG LEU LEU SER PHE CYS VAL LEU SEQRES 3 A 709 LEU ALA GLY LEU CYS ARG GLY ASN SER VAL GLU ARG LYS SEQRES 4 A 709 ILE TYR ILE PRO LEU ASN LYS THR ALA PRO CYS VAL ARG SEQRES 5 A 709 LEU LEU ASN ALA THR HIS GLN ILE GLY CYS GLN SER SER SEQRES 6 A 709 ILE SER GLY ASP THR GLY VAL ILE HIS VAL VAL GLU LYS SEQRES 7 A 709 GLU GLU ASP LEU GLN TRP VAL LEU THR ASP GLY PRO ASN SEQRES 8 A 709 PRO PRO TYR MET VAL LEU LEU GLU SER LYS HIS PHE THR SEQRES 9 A 709 ARG ASP LEU MET GLU LYS LEU LYS GLY ARG THR SER ARG SEQRES 10 A 709 ILE ALA GLY LEU ALA VAL SER LEU THR LYS PRO SER PRO SEQRES 11 A 709 ALA SER GLY PHE SER PRO SER VAL GLN CYS PRO ASN ASP SEQRES 12 A 709 GLY PHE GLY VAL TYR SER ASN SER TYR GLY PRO GLU PHE SEQRES 13 A 709 ALA HIS CYS ARG GLU ILE GLN TRP ASN SER LEU GLY ASN SEQRES 14 A 709 GLY LEU ALA TYR GLU ASP PHE SER PHE PRO ILE PHE LEU SEQRES 15 A 709 LEU GLU ASP GLU ASN GLU THR LYS VAL ILE LYS GLN CYS SEQRES 16 A 709 TYR GLN ASP HIS ASN LEU SER GLN ASN GLY SER ALA PRO SEQRES 17 A 709 THR PHE PRO LEU CYS ALA MET GLN LEU PHE SER HIS MET SEQRES 18 A 709 HIS ALA VAL ILE SER THR ALA THR CYS MET ARG ARG SER SEQRES 19 A 709 SER ILE GLN SER THR PHE SER ILE ASN PRO GLU ILE VAL SEQRES 20 A 709 CYS ASP PRO LEU SER ASP TYR ASN VAL TRP SER MET LEU SEQRES 21 A 709 LYS PRO ILE ASN THR THR GLY THR LEU LYS PRO ASP ASP SEQRES 22 A 709 ARG VAL VAL VAL ALA ALA THR ARG LEU ASP SER ARG SER SEQRES 23 A 709 PHE PHE TRP ASN VAL ALA PRO GLY ALA GLU SER ALA VAL SEQRES 24 A 709 ALA SER PHE VAL THR GLN LEU ALA ALA ALA GLU ALA LEU SEQRES 25 A 709 GLN LYS ALA PRO ASP VAL THR THR LEU PRO ARG ASN VAL SEQRES 26 A 709 MET PHE VAL PHE PHE GLN GLY GLU THR PHE ASP TYR ILE SEQRES 27 A 709 GLY SER SER ARG MET VAL TYR ASP MET GLU LYS GLY LYS SEQRES 28 A 709 PHE PRO VAL GLN LEU GLU ASN VAL ASP SER PHE VAL GLU SEQRES 29 A 709 LEU GLY GLN VAL ALA LEU ARG THR SER LEU GLU LEU TRP SEQRES 30 A 709 MET HIS THR ASP PRO VAL SER GLN LYS ASN GLU SER VAL SEQRES 31 A 709 ARG ASN GLN VAL GLU ASP LEU LEU ALA THR LEU GLU LYS SEQRES 32 A 709 SER GLY ALA GLY VAL PRO ALA VAL ILE LEU ARG ARG PRO SEQRES 33 A 709 ASN GLN SER GLN PRO LEU PRO PRO SER SER LEU GLN ARG SEQRES 34 A 709 PHE LEU ARG ALA ARG ASN ILE SER GLY VAL VAL LEU ALA SEQRES 35 A 709 ASP HIS SER GLY ALA PHE HIS ASN LYS TYR TYR GLN SER SEQRES 36 A 709 ILE TYR ASP THR ALA GLU ASN ILE ASN VAL SER TYR PRO SEQRES 37 A 709 GLU TRP LEU SER PRO GLU GLU ASP LEU ASN PHE VAL THR SEQRES 38 A 709 ASP THR ALA LYS ALA LEU ALA ASP VAL ALA THR VAL LEU SEQRES 39 A 709 GLY ARG ALA LEU TYR GLU LEU ALA GLY GLY THR ASN PHE SEQRES 40 A 709 SER ASP THR VAL GLN ALA ASP PRO GLN THR VAL THR ARG SEQRES 41 A 709 LEU LEU TYR GLY PHE LEU ILE LYS ALA ASN ASN SER TRP SEQRES 42 A 709 PHE GLN SER ILE LEU ARG GLN ASP LEU ARG SER TYR LEU SEQRES 43 A 709 GLY ASP GLY PRO LEU GLN HIS TYR ILE ALA VAL SER SER SEQRES 44 A 709 PRO THR ASN THR THR TYR VAL VAL GLN TYR ALA LEU ALA SEQRES 45 A 709 ASN LEU THR GLY THR VAL VAL ASN LEU THR ARG GLU GLN SEQRES 46 A 709 CYS GLN ASP PRO SER LYS VAL PRO SER GLU ASN LYS ASP SEQRES 47 A 709 LEU TYR GLU TYR SER TRP VAL GLN GLY PRO LEU HIS SER SEQRES 48 A 709 ASN GLU THR ASP ARG LEU PRO ARG CYS VAL ARG SER THR SEQRES 49 A 709 ALA ARG LEU ALA ARG ALA LEU SER PRO ALA PHE GLU LEU SEQRES 50 A 709 SER GLN TRP SER SER THR GLU TYR SER THR TRP THR GLU SEQRES 51 A 709 SER ARG TRP LYS ASP ILE ARG ALA ARG ILE PHE LEU ILE SEQRES 52 A 709 ALA SER LYS GLU LEU GLU LEU ILE THR LEU THR VAL GLY SEQRES 53 A 709 PHE GLY ILE LEU ILE PHE SER LEU ILE VAL THR TYR CYS SEQRES 54 A 709 ILE ASN ALA LYS ALA ASP VAL LEU PHE ILE ALA PRO ARG SEQRES 55 A 709 GLU PRO GLY ALA VAL SER TYR SEQRES 1 B 467 MET THR GLU LEU PRO ALA PRO LEU SER TYR PHE GLN ASN SEQRES 2 B 467 ALA GLN MET SER GLU ASP ASN HIS LEU SER ASN THR VAL SEQRES 3 B 467 ARG SER GLN ASN ASP ASN ARG GLU ARG GLN GLU HIS ASN SEQRES 4 B 467 ASP ARG ARG SER LEU GLY HIS PRO GLU PRO LEU SER ASN SEQRES 5 B 467 GLY ARG PRO GLN GLY ASN SER ARG GLN VAL VAL GLU GLN SEQRES 6 B 467 ASP GLU GLU GLU ASP GLU GLU LEU THR LEU LYS TYR GLY SEQRES 7 B 467 ALA LYS HIS VAL ILE MET LEU PHE VAL PRO VAL THR LEU SEQRES 8 B 467 CYS MET VAL VAL VAL VAL ALA THR ILE LYS SER VAL SER SEQRES 9 B 467 PHE TYR THR ARG LYS ASP GLY GLN LEU ILE TYR THR PRO SEQRES 10 B 467 PHE THR GLU ASP THR GLU THR VAL GLY GLN ARG ALA LEU SEQRES 11 B 467 HIS SER ILE LEU ASN ALA ALA ILE MET ILE SER VAL ILE SEQRES 12 B 467 VAL VAL MET THR ILE LEU LEU VAL VAL LEU TYR LYS TYR SEQRES 13 B 467 ARG CYS TYR LYS VAL ILE HIS ALA TRP LEU ILE ILE SER SEQRES 14 B 467 SER LEU LEU LEU LEU PHE PHE PHE SER PHE ILE TYR LEU SEQRES 15 B 467 GLY GLU VAL PHE LYS THR TYR ASN VAL ALA VAL ASP TYR SEQRES 16 B 467 ILE THR VAL ALA LEU LEU ILE TRP ASN PHE GLY VAL VAL SEQRES 17 B 467 GLY MET ILE SER ILE HIS TRP LYS GLY PRO LEU ARG LEU SEQRES 18 B 467 GLN GLN ALA TYR LEU ILE MET ILE SER ALA LEU MET ALA SEQRES 19 B 467 LEU VAL PHE ILE LYS TYR LEU PRO GLU TRP THR ALA TRP SEQRES 20 B 467 LEU ILE LEU ALA VAL ILE SER VAL TYR ASP LEU VAL ALA SEQRES 21 B 467 VAL LEU CYS PRO LYS GLY PRO LEU ARG MET LEU VAL GLU SEQRES 22 B 467 THR ALA GLN GLU ARG ASN GLU THR LEU PHE PRO ALA LEU SEQRES 23 B 467 ILE TYR SER SER THR MET VAL TRP LEU VAL ASN MET ALA SEQRES 24 B 467 GLU GLY ASP PRO GLU ALA GLN ARG ARG VAL SER LYS ASN SEQRES 25 B 467 SER LYS TYR ASN ALA GLU SER THR GLU ARG GLU SER GLN SEQRES 26 B 467 ASP THR VAL ALA GLU ASN ASP ASP GLY GLY PHE SER GLU SEQRES 27 B 467 GLU TRP GLU ALA GLN ARG ASP SER HIS LEU GLY PRO HIS SEQRES 28 B 467 ARG SER THR PRO GLU SER ARG ALA ALA VAL GLN GLU LEU SEQRES 29 B 467 SER SER SER ILE LEU ALA GLY GLU ASP PRO GLU GLU ARG SEQRES 30 B 467 GLY VAL LYS LEU GLY LEU GLY ASP PHE ILE PHE TYR SER SEQRES 31 B 467 VAL LEU VAL GLY LYS ALA SER ALA THR ALA SER GLY ASP SEQRES 32 B 467 TRP ASN THR THR ILE ALA CYS PHE VAL ALA ILE LEU ILE SEQRES 33 B 467 GLY LEU CYS LEU THR LEU LEU LEU LEU ALA ILE PHE LYS SEQRES 34 B 467 LYS ALA LEU PRO ALA LEU PRO ILE SER ILE THR PHE GLY SEQRES 35 B 467 LEU VAL PHE TYR PHE ALA THR ASP TYR LEU VAL GLN PRO SEQRES 36 B 467 PHE MET ASP GLN LEU ALA PHE HIS GLN PHE TYR ILE SEQRES 1 C 265 MET GLY ALA ALA VAL PHE PHE GLY CYS THR PHE VAL ALA SEQRES 2 C 265 PHE GLY PRO ALA PHE ALA LEU PHE LEU ILE THR VAL ALA SEQRES 3 C 265 GLY ASP PRO LEU ARG VAL ILE ILE LEU VAL ALA GLY ALA SEQRES 4 C 265 PHE PHE TRP LEU VAL SER LEU LEU LEU ALA SER VAL VAL SEQRES 5 C 265 TRP PHE ILE LEU VAL HIS VAL THR ASP ARG SER ASP ALA SEQRES 6 C 265 ARG LEU GLN TYR GLY LEU LEU ILE PHE GLY ALA ALA VAL SEQRES 7 C 265 SER VAL LEU LEU GLN GLU VAL PHE ARG PHE ALA TYR TYR SEQRES 8 C 265 LYS LEU LEU LYS LYS ALA ASP GLU GLY LEU ALA SER LEU SEQRES 9 C 265 SER GLU ASP GLY ARG SER PRO ILE SER ILE ARG GLN MET SEQRES 10 C 265 ALA TYR VAL SER GLY LEU SER PHE GLY ILE ILE SER GLY SEQRES 11 C 265 VAL PHE SER VAL ILE ASN ILE LEU ALA ASP ALA LEU GLY SEQRES 12 C 265 PRO GLY VAL VAL GLY ILE HIS GLY ASP SER PRO TYR TYR SEQRES 13 C 265 PHE LEU THR SER ALA PHE LEU THR ALA ALA ILE ILE LEU SEQRES 14 C 265 LEU HIS THR PHE TRP GLY VAL VAL PHE PHE ASP ALA CYS SEQRES 15 C 265 GLU ARG ARG ARG TYR TRP ALA LEU GLY LEU VAL VAL GLY SEQRES 16 C 265 SER HIS LEU LEU THR SER GLY LEU THR PHE LEU ASN PRO SEQRES 17 C 265 TRP TYR GLU ALA SER LEU LEU PRO ILE TYR ALA VAL THR SEQRES 18 C 265 VAL SER MET GLY LEU TRP ALA PHE ILE THR ALA GLY GLY SEQRES 19 C 265 SER LEU ARG SER ILE GLN ARG SER LEU LEU CYS ARG ARG SEQRES 20 C 265 GLN GLU ASP SER ARG VAL MET VAL TYR SER ALA LEU ARG SEQRES 21 C 265 ILE PRO PRO GLU ASP SEQRES 1 D 101 MET ASN LEU GLU ARG VAL SER ASN GLU GLU LYS LEU ASN SEQRES 2 D 101 LEU CYS ARG LYS TYR TYR LEU GLY GLY PHE ALA PHE LEU SEQRES 3 D 101 PRO PHE LEU TRP LEU VAL ASN ILE PHE TRP PHE PHE ARG SEQRES 4 D 101 GLU ALA PHE LEU VAL PRO ALA TYR THR GLU GLN SER GLN SEQRES 5 D 101 ILE LYS GLY TYR VAL TRP ARG SER ALA VAL GLY PHE LEU SEQRES 6 D 101 PHE TRP VAL ILE VAL LEU THR SER TRP ILE THR ILE PHE SEQRES 7 D 101 GLN ILE TYR ARG PRO ARG TRP GLY ALA LEU GLY ASP TYR SEQRES 8 D 101 LEU SER PHE THR ILE PRO LEU GLY THR PRO MODRES 5A63 ASN A 45 ASN GLYCOSYLATION SITE MODRES 5A63 ASN A 55 ASN GLYCOSYLATION SITE MODRES 5A63 ASN A 187 ASN GLYCOSYLATION SITE MODRES 5A63 ASN A 264 ASN GLYCOSYLATION SITE MODRES 5A63 ASN A 387 ASN GLYCOSYLATION SITE MODRES 5A63 ASN A 435 ASN GLYCOSYLATION SITE MODRES 5A63 ASN A 464 ASN GLYCOSYLATION SITE MODRES 5A63 ASN A 506 ASN GLYCOSYLATION SITE MODRES 5A63 ASN A 530 ASN GLYCOSYLATION SITE MODRES 5A63 ASN A 562 ASN GLYCOSYLATION SITE MODRES 5A63 ASN A 573 ASN GLYCOSYLATION SITE HET NAG E 1 14 HET NAG E 2 14 HET NAG F 1 14 HET NAG F 2 14 HET BMA F 3 11 HET BMA F 4 11 HET BMA F 5 11 HET NAG G 1 14 HET NAG G 2 14 HET NAG H 1 14 HET NAG H 2 14 HET NAG I 1 14 HET NAG I 2 14 HET NAG J 1 14 HET NAG J 2 14 HET NAG A1705 14 HET NAG A1712 14 HET NAG A1713 14 HET NAG A1714 14 HET NAG A1715 14 HET PC1 B1468 43 HET PC1 C1245 43 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM PC1 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE HETSYN PC1 3-SN-PHOSPHATIDYLCHOLINE FORMUL 5 NAG 17(C8 H15 N O6) FORMUL 6 BMA 3(C6 H12 O6) FORMUL 16 PC1 2(C44 H88 N O8 P) HELIX 1 1 ASN A 34 ILE A 40 1 7 HELIX 2 2 LYS A 78 THR A 87 1 10 HELIX 3 3 THR A 104 ARG A 114 1 11 HELIX 4 4 GLY A 153 ALA A 157 5 5 HELIX 5 5 ASP A 185 ASN A 200 1 16 HELIX 6 6 SER A 226 PHE A 240 1 15 HELIX 7 7 ALA A 298 ALA A 315 1 18 HELIX 8 8 GLY A 339 GLY A 350 1 12 HELIX 9 9 ASP A 381 ASN A 387 1 7 HELIX 10 10 ASN A 387 GLY A 407 1 21 HELIX 11 11 SER A 425 ARG A 434 1 10 HELIX 12 12 THR A 459 ASN A 464 1 6 HELIX 13 13 GLU A 474 PHE A 479 1 6 HELIX 14 14 THR A 481 GLY A 503 1 23 HELIX 15 15 ASP A 514 ILE A 527 1 14 HELIX 16 16 PHE A 534 LEU A 538 5 5 HELIX 17 17 ASP A 541 LEU A 546 5 6 HELIX 18 18 THR A 561 GLY A 576 1 16 HELIX 19 19 THR A 582 ASP A 588 1 7 HELIX 20 20 SER A 632 LEU A 637 1 6 HELIX 21 21 SER A 665 LYS A 693 1 29 HELIX 22 22 LYS A 693 PHE A 698 1 6 HELIX 23 23 GLY B 78 SER B 104 1 27 HELIX 24 24 PHE B 105 ARG B 108 5 4 HELIX 25 25 ILE B 167 ASN B 190 1 24 HELIX 26 26 TYR B 195 TRP B 215 1 21 HELIX 27 27 PRO B 218 LEU B 241 1 24 HELIX 28 28 PRO B 242 ALA B 260 1 19 HELIX 29 29 GLY B 382 THR B 399 1 18 HELIX 30 30 TRP B 404 PHE B 428 1 25 HELIX 31 31 LEU B 435 LEU B 452 1 18 HELIX 32 32 LEU B 452 GLN B 464 1 13 HELIX 33 33 GLY C 2 THR C 24 1 23 HELIX 34 34 ASP C 28 ASP C 61 1 34 HELIX 35 35 ASP C 64 SER C 103 1 40 HELIX 36 36 SER C 113 LEU C 142 1 30 HELIX 37 37 TYR C 155 ARG C 185 1 31 HELIX 38 38 ARG C 186 LEU C 206 1 21 HELIX 39 39 TRP C 209 ALA C 232 1 24 HELIX 40 40 SER C 235 LEU C 243 1 9 HELIX 41 41 ASN D 2 VAL D 6 5 5 HELIX 42 42 SER D 7 GLY D 22 1 16 HELIX 43 43 LEU D 26 TRP D 36 1 11 HELIX 44 44 PHE D 37 VAL D 44 1 8 HELIX 45 45 GLU D 49 TRP D 85 1 37 HELIX 46 46 GLY D 86 LEU D 92 1 7 SHEET 1 AA 5 TYR A 41 LEU A 44 0 SHEET 2 AA 5 ARG A 657 ALA A 664 -1 O ALA A 658 N LEU A 44 SHEET 3 AA 5 PRO A 211 PHE A 218 -1 O LEU A 212 N ILE A 663 SHEET 4 AA 5 THR A 70 VAL A 76 -1 O GLY A 71 N MET A 215 SHEET 5 AA 5 TYR A 94 LEU A 98 1 O MET A 95 N HIS A 74 SHEET 1 AB 3 THR A 47 PRO A 49 0 SHEET 2 AB 3 ILE A 180 LEU A 183 -1 N LEU A 182 O ALA A 48 SHEET 3 AB 3 LEU A 121 SER A 124 1 O LEU A 121 N PHE A 181 SHEET 1 AC 5 ASP A 175 PHE A 176 0 SHEET 2 AC 5 GLN A 59 CYS A 62 1 O GLY A 61 N PHE A 176 SHEET 3 AC 5 LEU A 53 LEU A 54 -1 O LEU A 53 N ILE A 60 SHEET 4 AC 5 THR A 649 SER A 651 -1 O THR A 649 N LEU A 54 SHEET 5 AC 5 CYS A 248 PRO A 250 -1 O ASP A 249 N GLU A 650 SHEET 1 AD 8 ILE A 412 ARG A 414 0 SHEET 2 AD 8 GLU A 375 HIS A 379 1 O LEU A 376 N ARG A 414 SHEET 3 AD 8 GLY A 438 ALA A 442 -1 O VAL A 440 N HIS A 379 SHEET 4 AD 8 VAL A 359 GLY A 366 1 O PHE A 362 N VAL A 439 SHEET 5 AD 8 VAL A 275 ARG A 281 1 O VAL A 275 N ASP A 360 SHEET 6 AD 8 ASN A 324 PHE A 330 1 O ASN A 324 N VAL A 276 SHEET 7 AD 8 ASP A 253 MET A 259 -1 O VAL A 256 N PHE A 329 SHEET 8 AD 8 LEU A 627 ALA A 630 -1 O ALA A 628 N ASN A 255 SHEET 1 AE 3 THR A 577 VAL A 579 0 SHEET 2 AE 3 ARG A 619 SER A 623 -1 O CYS A 620 N VAL A 579 SHEET 3 AE 3 GLU A 601 VAL A 605 -1 O GLU A 601 N SER A 623 SHEET 1 BA 2 VAL B 193 ASP B 194 0 SHEET 2 BA 2 SER D 93 THR D 95 -1 N PHE D 94 O VAL B 193 SSBOND 1 CYS A 50 CYS A 62 1555 1555 2.04 SSBOND 2 CYS A 140 CYS A 159 1555 1555 2.54 SSBOND 3 CYS A 195 CYS A 213 1555 1555 2.04 SSBOND 4 CYS A 230 CYS A 248 1555 1555 1.86 LINK ND2 ASN A 45 C1 NAG E 1 1555 1555 1.44 LINK ND2 ASN A 55 C1 NAG F 1 1555 1555 1.48 LINK ND2 ASN A 187 C1 NAG A1715 1555 1555 1.64 LINK ND2 ASN A 264 C1 NAG A1714 1555 1555 1.63 LINK ND2 ASN A 387 C1 NAG A1705 1555 1555 1.60 LINK ND2 ASN A 435 C1 NAG G 1 1555 1555 1.66 LINK ND2 ASN A 464 C1 NAG A1712 1555 1555 1.55 LINK ND2 ASN A 506 C1 NAG A1713 1555 1555 1.51 LINK ND2 ASN A 530 C1 NAG I 1 1555 1555 1.55 LINK ND2 ASN A 562 C1 NAG J 1 1555 1555 1.62 LINK ND2 ASN A 573 C1 NAG H 1 1555 1555 1.55 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.44 LINK O4 NAG F 1 C1 NAG F 2 1555 1555 1.44 LINK O4 NAG F 2 C1 BMA F 3 1555 1555 1.44 LINK O3 BMA F 3 C1 BMA F 4 1555 1555 1.44 LINK O6 BMA F 3 C1 BMA F 5 1555 1555 1.45 LINK O4 NAG G 1 C1 NAG G 2 1555 1555 1.44 LINK O4 NAG H 1 C1 NAG H 2 1555 1555 1.43 LINK O4 NAG I 1 C1 NAG I 2 1555 1555 1.45 LINK O4 NAG J 1 C1 NAG J 2 1555 1555 1.45 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000