PDB Short entry for 5B1L HEADER STRUCTURAL PROTEIN/DNA 08-DEC-15 5B1L TITLE THE MOUSE NUCLEOSOME STRUCTURE CONTAINING H3T COMPND MOL_ID: 1; COMPND 2 MOLECULE: HISTONE H3T; COMPND 3 CHAIN: A, E; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: HISTONE H4; COMPND 7 CHAIN: B, F; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: HISTONE H2A TYPE 1; COMPND 11 CHAIN: C, G; COMPND 12 ENGINEERED: YES; COMPND 13 MOL_ID: 4; COMPND 14 MOLECULE: HISTONE H2B TYPE 3-A; COMPND 15 CHAIN: D, H; COMPND 16 ENGINEERED: YES; COMPND 17 MOL_ID: 5; COMPND 18 MOLECULE: DNA (146-MER); COMPND 19 CHAIN: I, J; COMPND 20 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: GM12260; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET15B; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 13 ORGANISM_COMMON: MOUSE; SOURCE 14 ORGANISM_TAXID: 10090; SOURCE 15 GENE: HIST1H4A, HIST1H4B, H4-53, HIST1H4C, H4-12, HIST1H4D, SOURCE 16 HIST1H4F, HIST1H4H, HIST1H4I, HIST1H4J, HIST1H4K, HIST1H4M, SOURCE 17 HIST2H4A, HIST2H4, HIST4H4; SOURCE 18 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 19 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 20 EXPRESSION_SYSTEM_STRAIN: JM109(DE3); SOURCE 21 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 22 EXPRESSION_SYSTEM_PLASMID: PET15B; SOURCE 23 MOL_ID: 3; SOURCE 24 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 25 ORGANISM_COMMON: MOUSE; SOURCE 26 ORGANISM_TAXID: 10090; SOURCE 27 GENE: HIST1H2AB, HIST1H2AC, HIST1H2AD, HIST1H2AE, HIST1H2AG, SOURCE 28 HIST1H2AI, HIST1H2AN, HIST1H2AO; SOURCE 29 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 30 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 31 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 32 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 33 EXPRESSION_SYSTEM_PLASMID: PET15B; SOURCE 34 MOL_ID: 4; SOURCE 35 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 36 ORGANISM_COMMON: MOUSE; SOURCE 37 ORGANISM_TAXID: 10090; SOURCE 38 GENE: HIST3H2BA; SOURCE 39 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 40 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 41 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 42 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 43 EXPRESSION_SYSTEM_PLASMID: PET15B; SOURCE 44 MOL_ID: 5; SOURCE 45 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 46 ORGANISM_TAXID: 9606; SOURCE 47 EXPRESSION_SYSTEM: ESCHERICHIA COLI DH5[ALPHA]; SOURCE 48 EXPRESSION_SYSTEM_TAXID: 668369; SOURCE 49 EXPRESSION_SYSTEM_STRAIN: DH5[ALPHA]; SOURCE 50 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 51 EXPRESSION_SYSTEM_PLASMID: PGEM-T EASY KEYWDS CHROMATIN, SPERMATOGENESIS, HISTONE-FOLD, STRUCTURAL PROTEIN-DNA KEYWDS 2 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR T.URAHAMA,S.MACHIDA,N.HORIKOSHI,A.OSAKABE,H.TACHIWANA,H.TAGUCHI, AUTHOR 2 H.KURUMIZAKA REVDAT 3 08-NOV-23 5B1L 1 LINK REVDAT 2 26-FEB-20 5B1L 1 REMARK REVDAT 1 15-FEB-17 5B1L 0 JRNL AUTH J.UEDA,A.HARADA,T.URAHAMA,S.MACHIDA,K.MAEHARA,M.HADA, JRNL AUTH 2 Y.MAKINO,J.NOGAMI,N.HORIKOSHI,A.OSAKABE,H.TAGUCHI,H.TANAKA, JRNL AUTH 3 H.TACHIWANA,T.YAO,M.YAMADA,T.IWAMOTO,A.ISOTANI,M.IKAWA, JRNL AUTH 4 T.TACHIBANA,Y.OKADA,H.KIMURA,Y.OHKAWA,H.KURUMIZAKA, JRNL AUTH 5 K.YAMAGATA JRNL TITL TESTIS-SPECIFIC HISTONE VARIANT H3T GENE IS ESSENTIAL FOR JRNL TITL 2 ENTRY INTO SPERMATOGENESIS JRNL REF CELL REP V. 18 593 2017 JRNL REFN ESSN 2211-1247 JRNL PMID 28099840 JRNL DOI 10.1016/J.CELREP.2016.12.065 REMARK 2 REMARK 2 RESOLUTION. 2.35 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.35 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.83 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 74919 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.199 REMARK 3 R VALUE (WORKING SET) : 0.197 REMARK 3 FREE R VALUE : 0.243 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.030 REMARK 3 FREE R VALUE TEST SET COUNT : 3771 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.8396 - 7.0394 1.00 2834 145 0.1494 0.1896 REMARK 3 2 7.0394 - 5.5916 1.00 2720 144 0.1810 0.2119 REMARK 3 3 5.5916 - 4.8860 1.00 2679 150 0.1704 0.2081 REMARK 3 4 4.8860 - 4.4398 1.00 2683 126 0.1630 0.2089 REMARK 3 5 4.4398 - 4.1219 1.00 2668 139 0.1619 0.1980 REMARK 3 6 4.1219 - 3.8790 1.00 2641 151 0.1819 0.2318 REMARK 3 7 3.8790 - 3.6849 1.00 2652 133 0.1922 0.2367 REMARK 3 8 3.6849 - 3.5246 1.00 2622 156 0.1907 0.2360 REMARK 3 9 3.5246 - 3.3890 1.00 2635 146 0.1955 0.2334 REMARK 3 10 3.3890 - 3.2721 1.00 2600 159 0.2025 0.2587 REMARK 3 11 3.2721 - 3.1698 1.00 2629 135 0.2043 0.2368 REMARK 3 12 3.1698 - 3.0792 1.00 2609 145 0.2199 0.2529 REMARK 3 13 3.0792 - 2.9982 1.00 2606 154 0.2284 0.2848 REMARK 3 14 2.9982 - 2.9250 1.00 2607 139 0.2548 0.2816 REMARK 3 15 2.9250 - 2.8586 1.00 2632 128 0.2502 0.3216 REMARK 3 16 2.8586 - 2.7977 1.00 2651 130 0.2480 0.2743 REMARK 3 17 2.7977 - 2.7418 1.00 2580 142 0.2427 0.2721 REMARK 3 18 2.7418 - 2.6901 1.00 2632 132 0.2424 0.3275 REMARK 3 19 2.6901 - 2.6420 1.00 2609 141 0.2436 0.3159 REMARK 3 20 2.6420 - 2.5972 1.00 2605 136 0.2384 0.2893 REMARK 3 21 2.5972 - 2.5554 1.00 2588 136 0.2345 0.2906 REMARK 3 22 2.5554 - 2.5160 1.00 2613 133 0.2325 0.2689 REMARK 3 23 2.5160 - 2.4790 1.00 2627 129 0.2255 0.3476 REMARK 3 24 2.4790 - 2.4441 1.00 2586 141 0.2393 0.2794 REMARK 3 25 2.4441 - 2.4111 1.00 2603 143 0.2392 0.2820 REMARK 3 26 2.4111 - 2.3798 1.00 2611 135 0.2456 0.3365 REMARK 3 27 2.3798 - 2.3501 1.00 2626 123 0.2372 0.3300 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.310 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.600 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 40.94 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 48.19 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 12727 REMARK 3 ANGLE : 1.261 18430 REMARK 3 CHIRALITY : 0.056 2095 REMARK 3 PLANARITY : 0.008 1327 REMARK 3 DIHEDRAL : 29.205 5246 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 5 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN A REMARK 3 SELECTION : CHAIN E REMARK 3 ATOM PAIRS NUMBER : 954 REMARK 3 RMSD : NULL REMARK 3 NCS GROUP : 2 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN B REMARK 3 SELECTION : CHAIN F REMARK 3 ATOM PAIRS NUMBER : 740 REMARK 3 RMSD : NULL REMARK 3 NCS GROUP : 3 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN C REMARK 3 SELECTION : CHAIN G REMARK 3 ATOM PAIRS NUMBER : 960 REMARK 3 RMSD : NULL REMARK 3 NCS GROUP : 4 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN D REMARK 3 SELECTION : CHAIN H REMARK 3 ATOM PAIRS NUMBER : 836 REMARK 3 RMSD : NULL REMARK 3 NCS GROUP : 5 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN I REMARK 3 SELECTION : CHAIN J REMARK 3 ATOM PAIRS NUMBER : 2874 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5B1L COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 09-DEC-15. REMARK 100 THE DEPOSITION ID IS D_1300000368. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-FEB-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-1A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : HKL-2000 704Y REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 75240 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.350 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 6.600 REMARK 200 R MERGE (I) : 0.08600 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 5.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.35 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.43 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.70 REMARK 200 R MERGE FOR SHELL (I) : 0.45400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.5.6 REMARK 200 STARTING MODEL: PDB ENTRY 2CV5 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.01 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.20 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: POTASSIUM CACODYLATE, POTASSIUM REMARK 280 CHLORIDE, MANGANESE CHLORIDE, PH 6.0, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 49.48400 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 83.66600 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 53.71250 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 83.66600 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 49.48400 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 53.71250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DECAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DECAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 59140 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 70960 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -506.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F, G, H, I, J REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -3 REMARK 465 SER A -2 REMARK 465 HIS A -1 REMARK 465 MET A 0 REMARK 465 ALA A 1 REMARK 465 ARG A 2 REMARK 465 THR A 3 REMARK 465 LYS A 4 REMARK 465 GLN A 5 REMARK 465 THR A 6 REMARK 465 ALA A 7 REMARK 465 ARG A 8 REMARK 465 LYS A 9 REMARK 465 SER A 10 REMARK 465 THR A 11 REMARK 465 GLY A 12 REMARK 465 GLY A 13 REMARK 465 LYS A 14 REMARK 465 ALA A 15 REMARK 465 PRO A 16 REMARK 465 ARG A 17 REMARK 465 LYS A 18 REMARK 465 GLN A 19 REMARK 465 LEU A 20 REMARK 465 ALA A 21 REMARK 465 THR A 22 REMARK 465 LYS A 23 REMARK 465 VAL A 24 REMARK 465 ALA A 25 REMARK 465 ARG A 26 REMARK 465 LYS A 27 REMARK 465 SER A 28 REMARK 465 ALA A 29 REMARK 465 PRO A 30 REMARK 465 ALA A 31 REMARK 465 THR A 32 REMARK 465 GLY A 33 REMARK 465 GLY A 34 REMARK 465 VAL A 35 REMARK 465 LYS A 36 REMARK 465 LYS A 37 REMARK 465 ALA A 135 REMARK 465 GLY B -3 REMARK 465 SER B -2 REMARK 465 HIS B -1 REMARK 465 MET B 0 REMARK 465 SER B 1 REMARK 465 GLY B 2 REMARK 465 ARG B 3 REMARK 465 GLY B 4 REMARK 465 LYS B 5 REMARK 465 GLY B 6 REMARK 465 GLY B 7 REMARK 465 LYS B 8 REMARK 465 GLY B 9 REMARK 465 LEU B 10 REMARK 465 GLY B 11 REMARK 465 LYS B 12 REMARK 465 GLY B 13 REMARK 465 GLY B 14 REMARK 465 ALA B 15 REMARK 465 LYS B 16 REMARK 465 ARG B 17 REMARK 465 HIS B 18 REMARK 465 ARG B 19 REMARK 465 LYS B 20 REMARK 465 VAL B 21 REMARK 465 LEU B 22 REMARK 465 ARG B 23 REMARK 465 ASP B 24 REMARK 465 GLY C -3 REMARK 465 SER C -2 REMARK 465 HIS C -1 REMARK 465 MET C 0 REMARK 465 SER C 1 REMARK 465 GLY C 2 REMARK 465 ARG C 3 REMARK 465 GLY C 4 REMARK 465 LYS C 5 REMARK 465 GLN C 6 REMARK 465 GLY C 7 REMARK 465 GLY C 8 REMARK 465 LYS C 9 REMARK 465 ALA C 10 REMARK 465 LYS C 119 REMARK 465 THR C 120 REMARK 465 GLU C 121 REMARK 465 SER C 122 REMARK 465 HIS C 123 REMARK 465 HIS C 124 REMARK 465 LYS C 125 REMARK 465 ALA C 126 REMARK 465 LYS C 127 REMARK 465 GLY C 128 REMARK 465 LYS C 129 REMARK 465 GLY D -3 REMARK 465 SER D -2 REMARK 465 HIS D -1 REMARK 465 MET D 0 REMARK 465 PRO D 1 REMARK 465 GLU D 2 REMARK 465 PRO D 3 REMARK 465 SER D 4 REMARK 465 ARG D 5 REMARK 465 SER D 6 REMARK 465 THR D 7 REMARK 465 PRO D 8 REMARK 465 ALA D 9 REMARK 465 PRO D 10 REMARK 465 LYS D 11 REMARK 465 LYS D 12 REMARK 465 GLY D 13 REMARK 465 SER D 14 REMARK 465 LYS D 15 REMARK 465 LYS D 16 REMARK 465 ALA D 17 REMARK 465 ILE D 18 REMARK 465 THR D 19 REMARK 465 LYS D 20 REMARK 465 ALA D 21 REMARK 465 GLN D 22 REMARK 465 LYS D 23 REMARK 465 LYS D 24 REMARK 465 ASP D 25 REMARK 465 GLY D 26 REMARK 465 LYS D 27 REMARK 465 LYS D 28 REMARK 465 ARG D 29 REMARK 465 LYS D 30 REMARK 465 ARG D 31 REMARK 465 LYS D 125 REMARK 465 GLY E -3 REMARK 465 SER E -2 REMARK 465 HIS E -1 REMARK 465 MET E 0 REMARK 465 ALA E 1 REMARK 465 ARG E 2 REMARK 465 THR E 3 REMARK 465 LYS E 4 REMARK 465 GLN E 5 REMARK 465 THR E 6 REMARK 465 ALA E 7 REMARK 465 ARG E 8 REMARK 465 LYS E 9 REMARK 465 SER E 10 REMARK 465 THR E 11 REMARK 465 GLY E 12 REMARK 465 GLY E 13 REMARK 465 LYS E 14 REMARK 465 ALA E 15 REMARK 465 PRO E 16 REMARK 465 ARG E 17 REMARK 465 LYS E 18 REMARK 465 GLN E 19 REMARK 465 LEU E 20 REMARK 465 ALA E 21 REMARK 465 THR E 22 REMARK 465 LYS E 23 REMARK 465 VAL E 24 REMARK 465 ALA E 25 REMARK 465 ARG E 26 REMARK 465 LYS E 27 REMARK 465 SER E 28 REMARK 465 ALA E 29 REMARK 465 PRO E 30 REMARK 465 ALA E 31 REMARK 465 THR E 32 REMARK 465 GLY E 33 REMARK 465 GLY E 34 REMARK 465 VAL E 35 REMARK 465 LYS E 36 REMARK 465 LYS E 37 REMARK 465 ALA E 135 REMARK 465 GLY F -3 REMARK 465 SER F -2 REMARK 465 HIS F -1 REMARK 465 MET F 0 REMARK 465 SER F 1 REMARK 465 GLY F 2 REMARK 465 ARG F 3 REMARK 465 GLY F 4 REMARK 465 LYS F 5 REMARK 465 GLY F 6 REMARK 465 GLY F 7 REMARK 465 LYS F 8 REMARK 465 GLY F 9 REMARK 465 LEU F 10 REMARK 465 GLY F 11 REMARK 465 LYS F 12 REMARK 465 GLY F 13 REMARK 465 GLY F 14 REMARK 465 ALA F 15 REMARK 465 LYS F 16 REMARK 465 ARG F 17 REMARK 465 HIS F 18 REMARK 465 GLY G -3 REMARK 465 SER G -2 REMARK 465 HIS G -1 REMARK 465 MET G 0 REMARK 465 SER G 1 REMARK 465 GLY G 2 REMARK 465 ARG G 3 REMARK 465 GLY G 4 REMARK 465 LYS G 5 REMARK 465 GLN G 6 REMARK 465 GLY G 7 REMARK 465 GLY G 8 REMARK 465 LYS G 9 REMARK 465 ALA G 10 REMARK 465 ARG G 11 REMARK 465 ALA G 12 REMARK 465 LYS G 13 REMARK 465 ALA G 14 REMARK 465 LYS G 119 REMARK 465 THR G 120 REMARK 465 GLU G 121 REMARK 465 SER G 122 REMARK 465 HIS G 123 REMARK 465 HIS G 124 REMARK 465 LYS G 125 REMARK 465 ALA G 126 REMARK 465 LYS G 127 REMARK 465 GLY G 128 REMARK 465 LYS G 129 REMARK 465 GLY H -3 REMARK 465 SER H -2 REMARK 465 HIS H -1 REMARK 465 MET H 0 REMARK 465 PRO H 1 REMARK 465 GLU H 2 REMARK 465 PRO H 3 REMARK 465 SER H 4 REMARK 465 ARG H 5 REMARK 465 SER H 6 REMARK 465 THR H 7 REMARK 465 PRO H 8 REMARK 465 ALA H 9 REMARK 465 PRO H 10 REMARK 465 LYS H 11 REMARK 465 LYS H 12 REMARK 465 GLY H 13 REMARK 465 SER H 14 REMARK 465 LYS H 15 REMARK 465 LYS H 16 REMARK 465 ALA H 17 REMARK 465 ILE H 18 REMARK 465 THR H 19 REMARK 465 LYS H 20 REMARK 465 ALA H 21 REMARK 465 GLN H 22 REMARK 465 LYS H 23 REMARK 465 LYS H 24 REMARK 465 ASP H 25 REMARK 465 GLY H 26 REMARK 465 LYS H 27 REMARK 465 LYS H 28 REMARK 465 ARG H 29 REMARK 465 LYS H 30 REMARK 465 ARG H 31 REMARK 465 GLY H 32 REMARK 465 LYS H 125 REMARK 465 DA I 1 REMARK 465 DT J 292 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OP2 DA J 259 O HOH J 501 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DG I 15 O3' DG I 15 C3' -0.036 REMARK 500 DA I 28 O3' DA I 28 C3' -0.041 REMARK 500 DC I 49 O3' DC I 49 C3' -0.036 REMARK 500 DG I 58 O3' DG I 58 C3' -0.051 REMARK 500 DA I 67 O3' DA I 67 C3' -0.036 REMARK 500 DG I 68 O3' DG I 68 C3' -0.046 REMARK 500 DT I 80 O3' DT I 80 C3' -0.040 REMARK 500 DA I 99 O3' DA I 99 C3' -0.047 REMARK 500 DG I 100 O3' DG I 100 C3' -0.049 REMARK 500 DC I 108 O3' DC I 108 C3' -0.038 REMARK 500 DT I 120 O3' DT I 120 C3' -0.053 REMARK 500 DA I 124 O3' DA I 124 C3' -0.041 REMARK 500 DG I 125 O3' DG I 125 C3' -0.054 REMARK 500 DA J 151 O3' DA J 151 C3' -0.037 REMARK 500 DT J 152 O3' DT J 152 C3' -0.045 REMARK 500 DG J 161 O3' DG J 161 C3' -0.040 REMARK 500 DA J 173 O3' DA J 173 C3' -0.048 REMARK 500 DA J 174 O3' DA J 174 C3' -0.053 REMARK 500 DC J 190 O3' DC J 190 C3' -0.038 REMARK 500 DG J 204 O3' DG J 204 C3' -0.037 REMARK 500 DA J 213 O3' DA J 213 C3' -0.036 REMARK 500 DC J 225 O3' DC J 225 C3' -0.041 REMARK 500 DG J 227 O3' DG J 227 C3' -0.043 REMARK 500 DC J 235 O3' DC J 235 C3' -0.047 REMARK 500 DA J 245 O3' DA J 245 C3' -0.055 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DC I 16 O4' - C1' - N1 ANGL. DEV. = 2.0 DEGREES REMARK 500 DC I 26 O4' - C1' - N1 ANGL. DEV. = 1.9 DEGREES REMARK 500 DA I 29 O4' - C1' - N9 ANGL. DEV. = 2.4 DEGREES REMARK 500 DG I 33 O4' - C1' - N9 ANGL. DEV. = 2.7 DEGREES REMARK 500 DT I 34 O4' - C1' - N1 ANGL. DEV. = 2.1 DEGREES REMARK 500 DG I 58 O4' - C1' - N9 ANGL. DEV. = 2.0 DEGREES REMARK 500 DG I 68 O4' - C1' - N9 ANGL. DEV. = 2.9 DEGREES REMARK 500 DC I 84 O4' - C1' - N1 ANGL. DEV. = 3.3 DEGREES REMARK 500 DA I 111 O4' - C1' - N9 ANGL. DEV. = 2.1 DEGREES REMARK 500 DC I 116 O4' - C1' - N1 ANGL. DEV. = 3.5 DEGREES REMARK 500 DT I 120 O4' - C1' - N1 ANGL. DEV. = 2.1 DEGREES REMARK 500 DA I 124 O4' - C1' - N9 ANGL. DEV. = 2.4 DEGREES REMARK 500 DG I 125 O4' - C1' - N9 ANGL. DEV. = 3.5 DEGREES REMARK 500 DG I 134 O4' - C1' - N9 ANGL. DEV. = 2.1 DEGREES REMARK 500 DG I 135 O4' - C1' - N9 ANGL. DEV. = 3.2 DEGREES REMARK 500 DG I 138 O4' - C1' - N9 ANGL. DEV. = 2.0 DEGREES REMARK 500 DA I 145 O4' - C1' - N9 ANGL. DEV. = 3.7 DEGREES REMARK 500 DC J 190 O4' - C1' - N1 ANGL. DEV. = 4.2 DEGREES REMARK 500 DT J 191 O4' - C1' - N1 ANGL. DEV. = 2.3 DEGREES REMARK 500 DG J 192 O4' - C1' - N9 ANGL. DEV. = 1.9 DEGREES REMARK 500 DG J 214 O4' - C1' - N9 ANGL. DEV. = -5.4 DEGREES REMARK 500 DC J 225 O4' - C1' - N1 ANGL. DEV. = 1.9 DEGREES REMARK 500 DG J 227 O4' - C1' - N9 ANGL. DEV. = 1.9 DEGREES REMARK 500 DC J 234 O4' - C1' - N1 ANGL. DEV. = 2.0 DEGREES REMARK 500 DG J 240 O4' - C1' - N9 ANGL. DEV. = 2.9 DEGREES REMARK 500 DA J 241 O4' - C1' - N9 ANGL. DEV. = 3.7 DEGREES REMARK 500 DG J 244 O4' - C1' - N9 ANGL. DEV. = 2.7 DEGREES REMARK 500 DT J 250 O4' - C1' - N1 ANGL. DEV. = 2.0 DEGREES REMARK 500 DC J 254 O4' - C1' - N1 ANGL. DEV. = 2.6 DEGREES REMARK 500 DA J 257 O4' - C1' - N9 ANGL. DEV. = 2.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN D 301 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH C 409 O REMARK 620 2 VAL D 48 O 84.4 REMARK 620 3 HOH D 402 O 163.7 84.0 REMARK 620 4 HOH D 409 O 78.9 89.7 89.5 REMARK 620 5 ASP E 77 OD1 58.7 32.2 106.2 67.4 REMARK 620 6 HOH E 412 O 97.3 171.1 92.4 82.1 143.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN I 304 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DG I 68 O6 REMARK 620 2 HOH I 409 O 90.9 REMARK 620 3 HOH J 517 O 84.3 173.6 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN I 301 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DG I 121 N7 REMARK 620 2 HOH I 406 O 73.5 REMARK 620 3 HOH I 435 O 86.6 65.0 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN I 303 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DG I 134 N7 REMARK 620 2 HOH I 432 O 91.1 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN I 302 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH I 441 O REMARK 620 2 HOH J 511 O 98.9 REMARK 620 3 HOH J 538 O 177.3 78.9 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN I 305 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH I 419 O REMARK 620 2 HOH J 540 O 170.3 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN J 404 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DT J 183 OP1 REMARK 620 2 HOH J 541 O 112.1 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN J 402 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DG J 185 N7 REMARK 620 2 DG J 186 O6 83.3 REMARK 620 3 HOH J 522 O 91.2 89.8 REMARK 620 4 HOH J 530 O 95.1 175.4 86.0 REMARK 620 5 HOH J 531 O 81.3 106.1 161.4 77.8 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN J 405 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DG J 217 N7 REMARK 620 2 HOH J 502 O 76.9 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN J 401 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DG J 267 N7 REMARK 620 2 HOH J 505 O 84.0 REMARK 620 3 HOH J 532 O 85.4 160.3 REMARK 620 4 HOH J 537 O 106.9 102.0 96.9 REMARK 620 5 HOH J 545 O 154.7 105.0 78.6 94.4 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN J 403 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DG J 280 N7 REMARK 620 2 HOH J 519 O 97.9 REMARK 620 3 HOH J 544 O 168.5 71.3 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL C 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN D 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL E 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL G 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN I 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN I 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN I 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN I 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN I 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN I 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN J 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN J 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN J 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN J 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN J 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN J 406 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5B1M RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE SEQUENCE OF HISTONE H3T HAS BEEN REGISTERED IN GENBANK WITH REMARK 999 ACCESSION ID EDL07696.1. DBREF 5B1L A -3 135 PDB 5B1L 5B1L -3 135 DBREF 5B1L B 0 102 UNP P62806 H4_MOUSE 1 103 DBREF 5B1L C 0 129 UNP P22752 H2A1_MOUSE 1 130 DBREF 5B1L D 0 125 UNP Q9D2U9 H2B3A_MOUSE 1 126 DBREF 5B1L E -3 135 PDB 5B1L 5B1L -3 135 DBREF 5B1L F 0 102 UNP P62806 H4_MOUSE 1 103 DBREF 5B1L G 0 129 UNP P22752 H2A1_MOUSE 1 130 DBREF 5B1L H 0 125 UNP Q9D2U9 H2B3A_MOUSE 1 126 DBREF 5B1L I 1 146 PDB 5B1L 5B1L 1 146 DBREF 5B1L J 147 292 PDB 5B1L 5B1L 147 292 SEQADV 5B1L GLY B -3 UNP P62806 EXPRESSION TAG SEQADV 5B1L SER B -2 UNP P62806 EXPRESSION TAG SEQADV 5B1L HIS B -1 UNP P62806 EXPRESSION TAG SEQADV 5B1L GLY C -3 UNP P22752 EXPRESSION TAG SEQADV 5B1L SER C -2 UNP P22752 EXPRESSION TAG SEQADV 5B1L HIS C -1 UNP P22752 EXPRESSION TAG SEQADV 5B1L GLY D -3 UNP Q9D2U9 EXPRESSION TAG SEQADV 5B1L SER D -2 UNP Q9D2U9 EXPRESSION TAG SEQADV 5B1L HIS D -1 UNP Q9D2U9 EXPRESSION TAG SEQADV 5B1L GLY F -3 UNP P62806 EXPRESSION TAG SEQADV 5B1L SER F -2 UNP P62806 EXPRESSION TAG SEQADV 5B1L HIS F -1 UNP P62806 EXPRESSION TAG SEQADV 5B1L GLY G -3 UNP P22752 EXPRESSION TAG SEQADV 5B1L SER G -2 UNP P22752 EXPRESSION TAG SEQADV 5B1L HIS G -1 UNP P22752 EXPRESSION TAG SEQADV 5B1L GLY H -3 UNP Q9D2U9 EXPRESSION TAG SEQADV 5B1L SER H -2 UNP Q9D2U9 EXPRESSION TAG SEQADV 5B1L HIS H -1 UNP Q9D2U9 EXPRESSION TAG SEQRES 1 A 139 GLY SER HIS MET ALA ARG THR LYS GLN THR ALA ARG LYS SEQRES 2 A 139 SER THR GLY GLY LYS ALA PRO ARG LYS GLN LEU ALA THR SEQRES 3 A 139 LYS VAL ALA ARG LYS SER ALA PRO ALA THR GLY GLY VAL SEQRES 4 A 139 LYS LYS PRO HIS ARG TYR HIS PRO GLY THR VAL ALA LEU SEQRES 5 A 139 ARG GLU ILE ARG ARG TYR GLN LYS SER THR GLU LEU LEU SEQRES 6 A 139 ILE ARG LYS LEU PRO PHE GLN ARG LEU VAL ARG GLU ILE SEQRES 7 A 139 ALA GLN ASP PHE LYS THR ASP LEU ARG PHE GLN SER SER SEQRES 8 A 139 ALA VAL MET ALA LEU GLN GLU ALA CYS GLU SER TYR LEU SEQRES 9 A 139 VAL GLY LEU PHE GLU ASP THR ASN LEU CYS ALA ILE HIS SEQRES 10 A 139 ALA LYS ARG VAL THR ILE MET PRO LYS ASP ILE GLN LEU SEQRES 11 A 139 ALA ARG ARG ILE ARG GLY GLU ARG ALA SEQRES 1 B 106 GLY SER HIS MET SER GLY ARG GLY LYS GLY GLY LYS GLY SEQRES 2 B 106 LEU GLY LYS GLY GLY ALA LYS ARG HIS ARG LYS VAL LEU SEQRES 3 B 106 ARG ASP ASN ILE GLN GLY ILE THR LYS PRO ALA ILE ARG SEQRES 4 B 106 ARG LEU ALA ARG ARG GLY GLY VAL LYS ARG ILE SER GLY SEQRES 5 B 106 LEU ILE TYR GLU GLU THR ARG GLY VAL LEU LYS VAL PHE SEQRES 6 B 106 LEU GLU ASN VAL ILE ARG ASP ALA VAL THR TYR THR GLU SEQRES 7 B 106 HIS ALA LYS ARG LYS THR VAL THR ALA MET ASP VAL VAL SEQRES 8 B 106 TYR ALA LEU LYS ARG GLN GLY ARG THR LEU TYR GLY PHE SEQRES 9 B 106 GLY GLY SEQRES 1 C 133 GLY SER HIS MET SER GLY ARG GLY LYS GLN GLY GLY LYS SEQRES 2 C 133 ALA ARG ALA LYS ALA LYS THR ARG SER SER ARG ALA GLY SEQRES 3 C 133 LEU GLN PHE PRO VAL GLY ARG VAL HIS ARG LEU LEU ARG SEQRES 4 C 133 LYS GLY ASN TYR SER GLU ARG VAL GLY ALA GLY ALA PRO SEQRES 5 C 133 VAL TYR LEU ALA ALA VAL LEU GLU TYR LEU THR ALA GLU SEQRES 6 C 133 ILE LEU GLU LEU ALA GLY ASN ALA ALA ARG ASP ASN LYS SEQRES 7 C 133 LYS THR ARG ILE ILE PRO ARG HIS LEU GLN LEU ALA ILE SEQRES 8 C 133 ARG ASN ASP GLU GLU LEU ASN LYS LEU LEU GLY ARG VAL SEQRES 9 C 133 THR ILE ALA GLN GLY GLY VAL LEU PRO ASN ILE GLN ALA SEQRES 10 C 133 VAL LEU LEU PRO LYS LYS THR GLU SER HIS HIS LYS ALA SEQRES 11 C 133 LYS GLY LYS SEQRES 1 D 129 GLY SER HIS MET PRO GLU PRO SER ARG SER THR PRO ALA SEQRES 2 D 129 PRO LYS LYS GLY SER LYS LYS ALA ILE THR LYS ALA GLN SEQRES 3 D 129 LYS LYS ASP GLY LYS LYS ARG LYS ARG GLY ARG LYS GLU SEQRES 4 D 129 SER TYR SER ILE TYR VAL TYR LYS VAL LEU LYS GLN VAL SEQRES 5 D 129 HIS PRO ASP THR GLY ILE SER SER LYS ALA MET GLY ILE SEQRES 6 D 129 MET ASN SER PHE VAL ASN ASP ILE PHE GLU ARG ILE ALA SEQRES 7 D 129 SER GLU ALA SER ARG LEU ALA HIS TYR ASN LYS ARG SER SEQRES 8 D 129 THR ILE THR SER ARG GLU VAL GLN THR ALA VAL ARG LEU SEQRES 9 D 129 LEU LEU PRO GLY GLU LEU ALA LYS HIS ALA VAL SER GLU SEQRES 10 D 129 GLY THR LYS ALA VAL THR LYS TYR THR SER SER LYS SEQRES 1 E 139 GLY SER HIS MET ALA ARG THR LYS GLN THR ALA ARG LYS SEQRES 2 E 139 SER THR GLY GLY LYS ALA PRO ARG LYS GLN LEU ALA THR SEQRES 3 E 139 LYS VAL ALA ARG LYS SER ALA PRO ALA THR GLY GLY VAL SEQRES 4 E 139 LYS LYS PRO HIS ARG TYR HIS PRO GLY THR VAL ALA LEU SEQRES 5 E 139 ARG GLU ILE ARG ARG TYR GLN LYS SER THR GLU LEU LEU SEQRES 6 E 139 ILE ARG LYS LEU PRO PHE GLN ARG LEU VAL ARG GLU ILE SEQRES 7 E 139 ALA GLN ASP PHE LYS THR ASP LEU ARG PHE GLN SER SER SEQRES 8 E 139 ALA VAL MET ALA LEU GLN GLU ALA CYS GLU SER TYR LEU SEQRES 9 E 139 VAL GLY LEU PHE GLU ASP THR ASN LEU CYS ALA ILE HIS SEQRES 10 E 139 ALA LYS ARG VAL THR ILE MET PRO LYS ASP ILE GLN LEU SEQRES 11 E 139 ALA ARG ARG ILE ARG GLY GLU ARG ALA SEQRES 1 F 106 GLY SER HIS MET SER GLY ARG GLY LYS GLY GLY LYS GLY SEQRES 2 F 106 LEU GLY LYS GLY GLY ALA LYS ARG HIS ARG LYS VAL LEU SEQRES 3 F 106 ARG ASP ASN ILE GLN GLY ILE THR LYS PRO ALA ILE ARG SEQRES 4 F 106 ARG LEU ALA ARG ARG GLY GLY VAL LYS ARG ILE SER GLY SEQRES 5 F 106 LEU ILE TYR GLU GLU THR ARG GLY VAL LEU LYS VAL PHE SEQRES 6 F 106 LEU GLU ASN VAL ILE ARG ASP ALA VAL THR TYR THR GLU SEQRES 7 F 106 HIS ALA LYS ARG LYS THR VAL THR ALA MET ASP VAL VAL SEQRES 8 F 106 TYR ALA LEU LYS ARG GLN GLY ARG THR LEU TYR GLY PHE SEQRES 9 F 106 GLY GLY SEQRES 1 G 133 GLY SER HIS MET SER GLY ARG GLY LYS GLN GLY GLY LYS SEQRES 2 G 133 ALA ARG ALA LYS ALA LYS THR ARG SER SER ARG ALA GLY SEQRES 3 G 133 LEU GLN PHE PRO VAL GLY ARG VAL HIS ARG LEU LEU ARG SEQRES 4 G 133 LYS GLY ASN TYR SER GLU ARG VAL GLY ALA GLY ALA PRO SEQRES 5 G 133 VAL TYR LEU ALA ALA VAL LEU GLU TYR LEU THR ALA GLU SEQRES 6 G 133 ILE LEU GLU LEU ALA GLY ASN ALA ALA ARG ASP ASN LYS SEQRES 7 G 133 LYS THR ARG ILE ILE PRO ARG HIS LEU GLN LEU ALA ILE SEQRES 8 G 133 ARG ASN ASP GLU GLU LEU ASN LYS LEU LEU GLY ARG VAL SEQRES 9 G 133 THR ILE ALA GLN GLY GLY VAL LEU PRO ASN ILE GLN ALA SEQRES 10 G 133 VAL LEU LEU PRO LYS LYS THR GLU SER HIS HIS LYS ALA SEQRES 11 G 133 LYS GLY LYS SEQRES 1 H 129 GLY SER HIS MET PRO GLU PRO SER ARG SER THR PRO ALA SEQRES 2 H 129 PRO LYS LYS GLY SER LYS LYS ALA ILE THR LYS ALA GLN SEQRES 3 H 129 LYS LYS ASP GLY LYS LYS ARG LYS ARG GLY ARG LYS GLU SEQRES 4 H 129 SER TYR SER ILE TYR VAL TYR LYS VAL LEU LYS GLN VAL SEQRES 5 H 129 HIS PRO ASP THR GLY ILE SER SER LYS ALA MET GLY ILE SEQRES 6 H 129 MET ASN SER PHE VAL ASN ASP ILE PHE GLU ARG ILE ALA SEQRES 7 H 129 SER GLU ALA SER ARG LEU ALA HIS TYR ASN LYS ARG SER SEQRES 8 H 129 THR ILE THR SER ARG GLU VAL GLN THR ALA VAL ARG LEU SEQRES 9 H 129 LEU LEU PRO GLY GLU LEU ALA LYS HIS ALA VAL SER GLU SEQRES 10 H 129 GLY THR LYS ALA VAL THR LYS TYR THR SER SER LYS SEQRES 1 I 146 DA DT DC DA DA DT DA DT DC DC DA DC DC SEQRES 2 I 146 DT DG DC DA DG DA DT DT DC DT DA DC DC SEQRES 3 I 146 DA DA DA DA DG DT DG DT DA DT DT DT DG SEQRES 4 I 146 DG DA DA DA DC DT DG DC DT DC DC DA DT SEQRES 5 I 146 DC DA DA DA DA DG DG DC DA DT DG DT DT SEQRES 6 I 146 DC DA DG DC DT DG DA DA DT DT DC DA DG SEQRES 7 I 146 DC DT DG DA DA DC DA DT DG DC DC DT DT SEQRES 8 I 146 DT DT DG DA DT DG DG DA DG DC DA DG DT SEQRES 9 I 146 DT DT DC DC DA DA DA DT DA DC DA DC DT SEQRES 10 I 146 DT DT DT DG DG DT DA DG DA DA DT DC DT SEQRES 11 I 146 DG DC DA DG DG DT DG DG DA DT DA DT DT SEQRES 12 I 146 DG DA DT SEQRES 1 J 146 DA DT DC DA DA DT DA DT DC DC DA DC DC SEQRES 2 J 146 DT DG DC DA DG DA DT DT DC DT DA DC DC SEQRES 3 J 146 DA DA DA DA DG DT DG DT DA DT DT DT DG SEQRES 4 J 146 DG DA DA DA DC DT DG DC DT DC DC DA DT SEQRES 5 J 146 DC DA DA DA DA DG DG DC DA DT DG DT DT SEQRES 6 J 146 DC DA DG DC DT DG DA DA DT DT DC DA DG SEQRES 7 J 146 DC DT DG DA DA DC DA DT DG DC DC DT DT SEQRES 8 J 146 DT DT DG DA DT DG DG DA DG DC DA DG DT SEQRES 9 J 146 DT DT DC DC DA DA DA DT DA DC DA DC DT SEQRES 10 J 146 DT DT DT DG DG DT DA DG DA DA DT DC DT SEQRES 11 J 146 DG DC DA DG DG DT DG DG DA DT DA DT DT SEQRES 12 J 146 DG DA DT HET CL A 301 1 HET CL C 301 1 HET MN D 301 1 HET CL E 301 1 HET CL G 301 1 HET MN I 301 1 HET MN I 302 1 HET MN I 303 1 HET MN I 304 1 HET MN I 305 1 HET MN I 306 1 HET MN J 401 1 HET MN J 402 1 HET MN J 403 1 HET MN J 404 1 HET MN J 405 1 HET MN J 406 1 HETNAM CL CHLORIDE ION HETNAM MN MANGANESE (II) ION FORMUL 11 CL 4(CL 1-) FORMUL 13 MN 13(MN 2+) FORMUL 28 HOH *225(H2 O) HELIX 1 AA1 GLY A 44 SER A 57 1 14 HELIX 2 AA2 ARG A 63 LYS A 79 1 17 HELIX 3 AA3 GLN A 85 ALA A 114 1 30 HELIX 4 AA4 MET A 120 ARG A 131 1 12 HELIX 5 AA5 ASN B 25 ILE B 29 5 5 HELIX 6 AA6 THR B 30 GLY B 41 1 12 HELIX 7 AA7 LEU B 49 ALA B 76 1 28 HELIX 8 AA8 THR B 82 GLN B 93 1 12 HELIX 9 AA9 THR C 16 GLY C 22 1 7 HELIX 10 AB1 PRO C 26 GLY C 37 1 12 HELIX 11 AB2 GLY C 46 ASN C 73 1 28 HELIX 12 AB3 ILE C 79 ASN C 89 1 11 HELIX 13 AB4 ASP C 90 LEU C 97 1 8 HELIX 14 AB5 GLN C 112 LEU C 116 5 5 HELIX 15 AB6 TYR D 37 HIS D 49 1 13 HELIX 16 AB7 SER D 55 ASN D 84 1 30 HELIX 17 AB8 THR D 90 LEU D 102 1 13 HELIX 18 AB9 PRO D 103 SER D 124 1 22 HELIX 19 AC1 GLY E 44 SER E 57 1 14 HELIX 20 AC2 ARG E 63 LYS E 79 1 17 HELIX 21 AC3 GLN E 85 ALA E 114 1 30 HELIX 22 AC4 MET E 120 ARG E 131 1 12 HELIX 23 AC5 ASP F 24 ILE F 29 5 6 HELIX 24 AC6 THR F 30 GLY F 41 1 12 HELIX 25 AC7 LEU F 49 ALA F 76 1 28 HELIX 26 AC8 THR F 82 GLN F 93 1 12 HELIX 27 AC9 THR G 16 GLY G 22 1 7 HELIX 28 AD1 PRO G 26 GLY G 37 1 12 HELIX 29 AD2 ALA G 45 ASN G 73 1 29 HELIX 30 AD3 ILE G 79 ASN G 89 1 11 HELIX 31 AD4 ASP G 90 LEU G 97 1 8 HELIX 32 AD5 GLN G 112 LEU G 116 5 5 HELIX 33 AD6 TYR H 37 HIS H 49 1 13 HELIX 34 AD7 SER H 55 ASN H 84 1 30 HELIX 35 AD8 THR H 90 LEU H 102 1 13 HELIX 36 AD9 PRO H 103 SER H 124 1 22 SHEET 1 AA1 2 ARG A 83 PHE A 84 0 SHEET 2 AA1 2 THR B 80 VAL B 81 1 O VAL B 81 N ARG A 83 SHEET 1 AA2 2 THR A 118 ILE A 119 0 SHEET 2 AA2 2 ARG B 45 ILE B 46 1 O ARG B 45 N ILE A 119 SHEET 1 AA3 2 LEU B 97 TYR B 98 0 SHEET 2 AA3 2 THR G 101 ILE G 102 1 O THR G 101 N TYR B 98 SHEET 1 AA4 2 ARG C 42 VAL C 43 0 SHEET 2 AA4 2 THR D 88 ILE D 89 1 O ILE D 89 N ARG C 42 SHEET 1 AA5 2 ARG C 77 ILE C 78 0 SHEET 2 AA5 2 GLY D 53 ILE D 54 1 O GLY D 53 N ILE C 78 SHEET 1 AA6 2 THR C 101 ILE C 102 0 SHEET 2 AA6 2 LEU F 97 TYR F 98 1 O TYR F 98 N THR C 101 SHEET 1 AA7 2 ARG E 83 PHE E 84 0 SHEET 2 AA7 2 THR F 80 VAL F 81 1 O VAL F 81 N ARG E 83 SHEET 1 AA8 2 THR E 118 ILE E 119 0 SHEET 2 AA8 2 ARG F 45 ILE F 46 1 O ARG F 45 N ILE E 119 SHEET 1 AA9 2 ARG G 42 VAL G 43 0 SHEET 2 AA9 2 THR H 88 ILE H 89 1 O ILE H 89 N ARG G 42 SHEET 1 AB1 2 ARG G 77 ILE G 78 0 SHEET 2 AB1 2 GLY H 53 ILE H 54 1 O GLY H 53 N ILE G 78 LINK O HOH C 409 MN MN D 301 1555 1555 2.39 LINK O VAL D 48 MN MN D 301 1555 1555 2.19 LINK MN MN D 301 O HOH D 402 1555 1555 2.30 LINK MN MN D 301 O HOH D 409 1555 1555 1.85 LINK MN MN D 301 OD1 ASP E 77 3545 1555 2.01 LINK MN MN D 301 O HOH E 412 1555 3555 2.30 LINK N7 DA I 17 MN MN I 306 1555 1555 2.67 LINK O6 DG I 68 MN MN I 304 1555 1555 2.26 LINK N7 DG I 121 MN MN I 301 1555 1555 2.51 LINK N7 DG I 134 MN MN I 303 1555 1555 2.54 LINK MN MN I 301 O HOH I 406 1555 1555 2.38 LINK MN MN I 301 O HOH I 435 1555 1555 1.90 LINK MN MN I 302 O HOH I 441 1555 4445 2.29 LINK MN MN I 302 O HOH J 511 1555 4445 2.47 LINK MN MN I 302 O HOH J 538 1555 4445 2.14 LINK MN MN I 303 O HOH I 432 1555 1555 1.81 LINK MN MN I 304 O HOH I 409 1555 1555 2.20 LINK MN MN I 304 O HOH J 517 1555 1555 2.18 LINK MN MN I 305 O HOH I 419 1555 1555 2.38 LINK MN MN I 305 O HOH J 540 1555 1555 2.49 LINK OP1 DT J 183 MN MN J 404 1555 1555 2.53 LINK N7 DG J 185 MN MN J 402 1555 1555 2.30 LINK O6 DG J 186 MN MN J 402 1555 1555 2.53 LINK N7 DG J 217 MN MN J 405 1555 1555 2.36 LINK N7 DG J 267 MN MN J 401 1555 1555 2.51 LINK N7 DG J 280 MN MN J 403 1555 1555 2.39 LINK MN MN J 401 O HOH J 505 1555 1555 2.12 LINK MN MN J 401 O HOH J 532 1555 1555 1.85 LINK MN MN J 401 O HOH J 537 1555 1555 2.35 LINK MN MN J 401 O HOH J 545 1555 1555 2.58 LINK MN MN J 402 O HOH J 522 1555 1555 2.66 LINK MN MN J 402 O HOH J 530 1555 1555 2.09 LINK MN MN J 402 O HOH J 531 1555 1555 2.33 LINK MN MN J 403 O HOH J 519 1555 1555 2.31 LINK MN MN J 403 O HOH J 544 1555 1555 2.06 LINK MN MN J 404 O HOH J 541 1555 4545 2.58 LINK MN MN J 405 O HOH J 502 1555 1555 2.48 LINK MN MN J 406 O HOH J 542 1555 1555 2.79 SITE 1 AC1 2 PRO A 121 LYS A 122 SITE 1 AC2 5 GLY C 44 GLY C 46 ALA C 47 THR D 90 SITE 2 AC2 5 SER D 91 SITE 1 AC3 6 HOH C 409 VAL D 48 HOH D 402 HOH D 409 SITE 2 AC3 6 ASP E 77 HOH E 412 SITE 1 AC4 2 PRO E 121 LYS E 122 SITE 1 AC5 4 GLY G 44 GLY G 46 ALA G 47 SER H 91 SITE 1 AC6 3 DG I 121 HOH I 406 HOH I 435 SITE 1 AC7 4 HOH I 414 HOH I 441 HOH J 511 HOH J 538 SITE 1 AC8 3 DG I 134 HOH I 432 HOH I 437 SITE 1 AC9 3 DG I 68 HOH I 409 HOH J 517 SITE 1 AD1 2 HOH I 419 HOH J 540 SITE 1 AD2 1 DA I 17 SITE 1 AD3 5 DG J 267 HOH J 505 HOH J 532 HOH J 537 SITE 2 AD3 5 HOH J 545 SITE 1 AD4 5 DG J 185 DG J 186 HOH J 522 HOH J 530 SITE 2 AD4 5 HOH J 531 SITE 1 AD5 3 DG J 280 HOH J 519 HOH J 544 SITE 1 AD6 2 DT J 183 HOH J 541 SITE 1 AD7 2 DG J 217 HOH J 502 SITE 1 AD8 1 HOH J 542 CRYST1 98.968 107.425 167.332 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010104 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009309 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005976 0.00000