PDB Short entry for 5CBY HEADER DNA BINDING PROTEIN/DNA 01-JUL-15 5CBY TITLE ANCGR2 DNA BINDING DOMAIN - (+)GRE COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: ANCGR2 DNA BINDING DOMAIN; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: GR,NUCLEAR RECEPTOR SUBFAMILY 3 GROUP C MEMBER 1; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: DNA (5'- COMPND 8 D(*CP*CP*AP*GP*AP*AP*CP*AP*GP*AP*GP*TP*GP*TP*TP*CP*TP*G)-3'); COMPND 9 CHAIN: C; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: DNA (5'- COMPND 13 D(*TP*CP*AP*GP*AP*AP*CP*AP*CP*TP*CP*TP*GP*TP*TP*CP*TP*G)-3'); COMPND 14 CHAIN: D; COMPND 15 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: UNCLASSIFIED; SOURCE 3 ORGANISM_TAXID: 32644; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 MOL_ID: 2; SOURCE 7 SYNTHETIC: YES; SOURCE 8 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 9 ORGANISM_TAXID: 32630; SOURCE 10 MOL_ID: 3; SOURCE 11 SYNTHETIC: YES; SOURCE 12 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 13 ORGANISM_TAXID: 32630 KEYWDS DNA BINDING PROTEINS, DNA BINDING PROTEIN-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR W.H.HUDSON,E.A.ORTLUND REVDAT 5 06-MAR-24 5CBY 1 REMARK REVDAT 4 25-DEC-19 5CBY 1 REMARK REVDAT 3 20-SEP-17 5CBY 1 JRNL REMARK REVDAT 2 16-MAR-16 5CBY 1 JRNL REVDAT 1 23-DEC-15 5CBY 0 JRNL AUTH W.H.HUDSON,B.R.KOSSMANN,I.M.DE VERA,S.W.CHUO,E.R.WEIKUM, JRNL AUTH 2 G.N.EICK,J.W.THORNTON,I.N.IVANOV,D.J.KOJETIN,E.A.ORTLUND JRNL TITL DISTAL SUBSTITUTIONS DRIVE DIVERGENT DNA SPECIFICITY AMONG JRNL TITL 2 PARALOGOUS TRANSCRIPTION FACTORS THROUGH SUBDIVISION OF JRNL TITL 3 CONFORMATIONAL SPACE. JRNL REF PROC.NATL.ACAD.SCI.USA V. 113 326 2016 JRNL REFN ESSN 1091-6490 JRNL PMID 26715749 JRNL DOI 10.1073/PNAS.1518960113 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.74 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 91.0 REMARK 3 NUMBER OF REFLECTIONS : 27116 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.185 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.217 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.370 REMARK 3 FREE R VALUE TEST SET COUNT : 1999 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 36.7489 - 4.8090 1.00 2062 164 0.1568 0.1816 REMARK 3 2 4.8090 - 3.8183 1.00 2003 159 0.1565 0.1952 REMARK 3 3 3.8183 - 3.3360 1.00 2001 160 0.1852 0.2196 REMARK 3 4 3.3360 - 3.0312 0.99 1943 155 0.1896 0.2362 REMARK 3 5 3.0312 - 2.8140 1.00 1979 158 0.1998 0.2233 REMARK 3 6 2.8140 - 2.6481 1.00 1952 155 0.1965 0.2599 REMARK 3 7 2.6481 - 2.5155 0.99 1960 155 0.1985 0.2548 REMARK 3 8 2.5155 - 2.4061 0.98 1905 152 0.1958 0.2346 REMARK 3 9 2.4061 - 2.3135 0.96 1894 150 0.1933 0.2062 REMARK 3 10 2.3135 - 2.2336 0.92 1774 142 0.1943 0.2439 REMARK 3 11 2.2336 - 2.1638 0.85 1653 131 0.1950 0.2244 REMARK 3 12 2.1638 - 2.1020 0.78 1541 123 0.1897 0.2128 REMARK 3 13 2.1020 - 2.0466 0.69 1342 106 0.2114 0.2136 REMARK 3 14 2.0466 - 1.9967 0.57 1108 89 0.2339 0.2540 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.200 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.610 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 1999 REMARK 3 ANGLE : 1.202 2837 REMARK 3 CHIRALITY : 0.052 307 REMARK 3 PLANARITY : 0.009 239 REMARK 3 DIHEDRAL : 23.862 802 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5CBY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-JUL-15. REMARK 100 THE DEPOSITION ID IS D_1000211255. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-OCT-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27141 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.3 REMARK 200 DATA REDUNDANCY : 4.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 20.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.03 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.16 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES (PH 7.5) AND 15% PEG 8000, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 65.82200 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 19.39900 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 65.82200 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 19.39900 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5180 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13000 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -32.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 391 REMARK 465 HIS A 392 REMARK 465 HIS A 393 REMARK 465 HIS A 394 REMARK 465 HIS A 395 REMARK 465 HIS A 396 REMARK 465 HIS A 397 REMARK 465 SER A 398 REMARK 465 SER A 399 REMARK 465 GLY A 400 REMARK 465 VAL A 401 REMARK 465 ASP A 402 REMARK 465 LEU A 403 REMARK 465 GLY A 404 REMARK 465 THR A 405 REMARK 465 GLU A 406 REMARK 465 ASN A 407 REMARK 465 LEU A 408 REMARK 465 TYR A 409 REMARK 465 PHE A 410 REMARK 465 GLN A 411 REMARK 465 SER A 412 REMARK 465 ASN A 413 REMARK 465 ALA A 414 REMARK 465 GLY A 415 REMARK 465 PRO A 416 REMARK 465 THR A 493 REMARK 465 LYS A 494 REMARK 465 LYS A 495 REMARK 465 MET B 391 REMARK 465 HIS B 392 REMARK 465 HIS B 393 REMARK 465 HIS B 394 REMARK 465 HIS B 395 REMARK 465 HIS B 396 REMARK 465 HIS B 397 REMARK 465 SER B 398 REMARK 465 SER B 399 REMARK 465 GLY B 400 REMARK 465 VAL B 401 REMARK 465 ASP B 402 REMARK 465 LEU B 403 REMARK 465 GLY B 404 REMARK 465 THR B 405 REMARK 465 GLU B 406 REMARK 465 ASN B 407 REMARK 465 LEU B 408 REMARK 465 TYR B 409 REMARK 465 PHE B 410 REMARK 465 GLN B 411 REMARK 465 SER B 412 REMARK 465 ASN B 413 REMARK 465 ALA B 414 REMARK 465 GLY B 415 REMARK 465 PRO B 416 REMARK 465 PRO B 417 REMARK 465 ALA B 490 REMARK 465 ARG B 491 REMARK 465 LYS B 492 REMARK 465 THR B 493 REMARK 465 LYS B 494 REMARK 465 LYS B 495 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLY B 451 ND1 HIS B 453 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DC D 9 O4' - C1' - N1 ANGL. DEV. = 2.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS B 419 69.74 60.21 REMARK 500 VAL B 423 -63.19 -95.83 REMARK 500 SER B 425 -1.58 71.08 REMARK 500 GLN B 452 -9.06 71.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLN B 452 HIS B 453 -145.46 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 501 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 421 SG REMARK 620 2 CYS A 424 SG 112.2 REMARK 620 3 CYS A 438 SG 116.0 106.6 REMARK 620 4 CYS A 441 SG 109.1 110.4 101.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 502 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 457 SG REMARK 620 2 CYS A 463 SG 100.1 REMARK 620 3 CYS A 473 SG 114.7 113.9 REMARK 620 4 CYS A 476 SG 111.5 108.1 108.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 501 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 421 SG REMARK 620 2 CYS B 424 SG 112.5 REMARK 620 3 CYS B 438 SG 116.3 106.7 REMARK 620 4 CYS B 441 SG 106.5 111.6 102.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 502 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 457 SG REMARK 620 2 CYS B 463 SG 102.8 REMARK 620 3 CYS B 473 SG 112.6 113.6 REMARK 620 4 CYS B 476 SG 109.2 112.2 106.5 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 502 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5CBX RELATED DB: PDB REMARK 900 RELATED ID: 5CBZ RELATED DB: PDB REMARK 900 RELATED ID: 5CC0 RELATED DB: PDB REMARK 900 RELATED ID: 5CC1 RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THIS SEQUENCE WAS GENERATED FROM ANCESTRAL SEQUENCE RECONSTRUCTION DBREF 5CBY A 391 495 PDB 5CBY 5CBY 391 495 DBREF 5CBY B 391 495 PDB 5CBY 5CBY 391 495 DBREF 5CBY C 1 18 PDB 5CBY 5CBY 1 18 DBREF 5CBY D 1 18 PDB 5CBY 5CBY 1 18 SEQRES 1 A 105 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 105 GLY THR GLU ASN LEU TYR PHE GLN SER ASN ALA GLY PRO SEQRES 3 A 105 PRO PRO LYS ILE CYS LEU VAL CYS SER ASP GLU ALA SER SEQRES 4 A 105 GLY CYS HIS TYR GLY VAL LEU THR CYS GLY SER CYS LYS SEQRES 5 A 105 VAL PHE PHE LYS ARG ALA VAL GLU GLY GLN HIS ASN TYR SEQRES 6 A 105 LEU CYS ALA GLY ARG ASN ASP CYS ILE ILE ASP LYS ILE SEQRES 7 A 105 ARG ARG LYS ASN CYS PRO ALA CYS ARG PHE ARG LYS CYS SEQRES 8 A 105 LEU GLN ALA GLY MET ASN LEU GLU ALA ARG LYS THR LYS SEQRES 9 A 105 LYS SEQRES 1 B 105 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 B 105 GLY THR GLU ASN LEU TYR PHE GLN SER ASN ALA GLY PRO SEQRES 3 B 105 PRO PRO LYS ILE CYS LEU VAL CYS SER ASP GLU ALA SER SEQRES 4 B 105 GLY CYS HIS TYR GLY VAL LEU THR CYS GLY SER CYS LYS SEQRES 5 B 105 VAL PHE PHE LYS ARG ALA VAL GLU GLY GLN HIS ASN TYR SEQRES 6 B 105 LEU CYS ALA GLY ARG ASN ASP CYS ILE ILE ASP LYS ILE SEQRES 7 B 105 ARG ARG LYS ASN CYS PRO ALA CYS ARG PHE ARG LYS CYS SEQRES 8 B 105 LEU GLN ALA GLY MET ASN LEU GLU ALA ARG LYS THR LYS SEQRES 9 B 105 LYS SEQRES 1 C 18 DC DC DA DG DA DA DC DA DG DA DG DT DG SEQRES 2 C 18 DT DT DC DT DG SEQRES 1 D 18 DT DC DA DG DA DA DC DA DC DT DC DT DG SEQRES 2 D 18 DT DT DC DT DG HET ZN A 501 1 HET ZN A 502 1 HET ZN B 501 1 HET ZN B 502 1 HETNAM ZN ZINC ION FORMUL 5 ZN 4(ZN 2+) FORMUL 9 HOH *138(H2 O) HELIX 1 AA1 CYS A 438 GLY A 451 1 14 HELIX 2 AA2 CYS A 473 GLY A 485 1 13 HELIX 3 AA3 CYS B 438 GLY B 451 1 14 HELIX 4 AA4 ILE B 468 ASN B 472 5 5 HELIX 5 AA5 CYS B 473 ALA B 484 1 12 SHEET 1 AA1 2 GLY A 430 HIS A 432 0 SHEET 2 AA1 2 VAL A 435 THR A 437 -1 O VAL A 435 N HIS A 432 SHEET 1 AA2 2 GLY B 430 HIS B 432 0 SHEET 2 AA2 2 VAL B 435 THR B 437 -1 O VAL B 435 N HIS B 432 LINK SG CYS A 421 ZN ZN A 501 1555 1555 2.31 LINK SG CYS A 424 ZN ZN A 501 1555 1555 2.27 LINK SG CYS A 438 ZN ZN A 501 1555 1555 2.34 LINK SG CYS A 441 ZN ZN A 501 1555 1555 2.33 LINK SG CYS A 457 ZN ZN A 502 1555 1555 2.34 LINK SG CYS A 463 ZN ZN A 502 1555 1555 2.38 LINK SG CYS A 473 ZN ZN A 502 1555 1555 2.30 LINK SG CYS A 476 ZN ZN A 502 1555 1555 2.28 LINK SG CYS B 421 ZN ZN B 501 1555 1555 2.27 LINK SG CYS B 424 ZN ZN B 501 1555 1555 2.33 LINK SG CYS B 438 ZN ZN B 501 1555 1555 2.27 LINK SG CYS B 441 ZN ZN B 501 1555 1555 2.40 LINK SG CYS B 457 ZN ZN B 502 1555 1555 2.27 LINK SG CYS B 463 ZN ZN B 502 1555 1555 2.35 LINK SG CYS B 473 ZN ZN B 502 1555 1555 2.31 LINK SG CYS B 476 ZN ZN B 502 1555 1555 2.39 SITE 1 AC1 4 CYS A 421 CYS A 424 CYS A 438 CYS A 441 SITE 1 AC2 4 CYS A 457 CYS A 463 CYS A 473 CYS A 476 SITE 1 AC3 4 CYS B 421 CYS B 424 CYS B 438 CYS B 441 SITE 1 AC4 4 CYS B 457 CYS B 463 CYS B 473 CYS B 476 CRYST1 131.644 38.798 98.250 90.00 119.65 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007596 0.000000 0.004324 0.00000 SCALE2 0.000000 0.025775 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011712 0.00000