PDB Short entry for 5CPJ HEADER "STRUCTURAL PROTEIN/DNA 21-JUL-15 5CPJ TITLE NUCLEOSOME CONTAINING METHYLATED SAT2R DNA COMPND MOL_ID: 1; COMPND 2 MOLECULE: HISTONE H3.1; COMPND 3 CHAIN: A, E; COMPND 4 SYNONYM: HISTONE H3/A,HISTONE H3/B,HISTONE H3/C,HISTONE H3/D,HISTONE COMPND 5 H3/F,HISTONE H3/H,HISTONE H3/I,HISTONE H3/J,HISTONE H3/K,HISTONE COMPND 6 H3/L; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: HISTONE H4; COMPND 10 CHAIN: B, F; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: HISTONE H2A TYPE 1-B/E; COMPND 14 CHAIN: C, G; COMPND 15 SYNONYM: HISTONE H2A.2,HISTONE H2A/A,HISTONE H2A/M; COMPND 16 ENGINEERED: YES; COMPND 17 MOL_ID: 4; COMPND 18 MOLECULE: HISTONE H2B TYPE 1-J; COMPND 19 CHAIN: D, H; COMPND 20 SYNONYM: HISTONE H2B.1,HISTONE H2B.R,H2B/R; COMPND 21 ENGINEERED: YES; COMPND 22 MOL_ID: 5; COMPND 23 MOLECULE: DNA (146-MER); COMPND 24 CHAIN: I; COMPND 25 ENGINEERED: YES; COMPND 26 MOL_ID: 6; COMPND 27 MOLECULE: DNA (146-MER); COMPND 28 CHAIN: J; COMPND 29 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: HIST1H3A, H3FA, HIST1H3B, H3FL, HIST1H3C, H3FC, HIST1H3D, SOURCE 6 H3FB, HIST1H3E, H3FD, HIST1H3F, H3FI, HIST1H3G, H3FH, HIST1H3H, SOURCE 7 H3FK, HIST1H3I, H3FF, HIST1H3J, H3FJ; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 10 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 11 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 12 EXPRESSION_SYSTEM_PLASMID: PUC19; SOURCE 13 MOL_ID: 2; SOURCE 14 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 15 ORGANISM_COMMON: HUMAN; SOURCE 16 ORGANISM_TAXID: 9606; SOURCE 17 GENE: HIST1H4A, H4/A, H4FA, HIST1H4B, H4/I, H4FI, HIST1H4C, H4/G, SOURCE 18 H4FG, HIST1H4D, H4/B, H4FB, HIST1H4E, H4/J, H4FJ, HIST1H4F, H4/C, SOURCE 19 H4FC, HIST1H4H, H4/H, H4FH, HIST1H4I, H4/M, H4FM, HIST1H4J, H4/E, SOURCE 20 H4FE, HIST1H4K, H4/D, H4FD, HIST1H4L, H4/K, H4FK, HIST2H4A, H4/N, SOURCE 21 H4F2, H4FN, HIST2H4, HIST2H4B, H4/O, H4FO, HIST4H4; SOURCE 22 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 23 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 24 EXPRESSION_SYSTEM_STRAIN: JM109(DE3); SOURCE 25 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 26 EXPRESSION_SYSTEM_PLASMID: PET15B; SOURCE 27 MOL_ID: 3; SOURCE 28 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 29 ORGANISM_COMMON: HUMAN; SOURCE 30 ORGANISM_TAXID: 9606; SOURCE 31 GENE: HIST1H2AB, H2AFM, HIST1H2AE, H2AFA; SOURCE 32 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 33 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 34 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 35 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 36 EXPRESSION_SYSTEM_PLASMID: PUC19; SOURCE 37 MOL_ID: 4; SOURCE 38 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 39 ORGANISM_COMMON: HUMAN; SOURCE 40 ORGANISM_TAXID: 9606; SOURCE 41 GENE: HIST1H2BJ, H2BFR; SOURCE 42 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 43 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 44 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 45 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 46 EXPRESSION_SYSTEM_PLASMID: PUC19; SOURCE 47 MOL_ID: 5; SOURCE 48 SYNTHETIC: YES; SOURCE 49 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 50 ORGANISM_COMMON: HUMAN; SOURCE 51 ORGANISM_TAXID: 9606; SOURCE 52 MOL_ID: 6; SOURCE 53 SYNTHETIC: YES; SOURCE 54 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 55 ORGANISM_COMMON: HUMAN; SOURCE 56 ORGANISM_TAXID: 9606 KEYWDS HISTONE FOLD, DNA BINDING, NUCLEUS, NUCLEOSOME, CHROMATIN FORMATION, KEYWDS 2 DNA METHYLATION, STRUCTURAL PROTEIN-DNA COMPLEX, "STRUCTURAL KEYWDS 3 PROTEIN-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR A.OSAKABE,Y.ARIMURA,F.ADACHI,K.MAEHARA,Y.OHKAWA,H.KURUMIZAKA REVDAT 3 08-NOV-23 5CPJ 1 REMARK REVDAT 2 19-FEB-20 5CPJ 1 REMARK REVDAT 1 28-OCT-15 5CPJ 0 JRNL AUTH A.OSAKABE,F.ADACHI,Y.ARIMURA,K.MAEHARA,Y.OHKAWA,H.KURUMIZAKA JRNL TITL INFLUENCE OF DNA METHYLATION ON POSITIONING AND DNA JRNL TITL 2 FLEXIBILITY OF NUCLEOSOMES WITH PERICENTRIC SATELLITE DNA. JRNL REF OPEN BIOLOGY V. 5 2015 JRNL REFN ESSN 2046-2441 JRNL PMID 26446621 JRNL DOI 10.1098/RSOB.150128 REMARK 2 REMARK 2 RESOLUTION. 3.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.4_1496 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.15 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.90 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.400 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 34273 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.239 REMARK 3 R VALUE (WORKING SET) : 0.235 REMARK 3 FREE R VALUE : 0.296 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.730 REMARK 3 FREE R VALUE TEST SET COUNT : 1963 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 24.9042 - 7.5266 0.97 2397 148 0.1602 0.2249 REMARK 3 2 7.5266 - 6.0016 1.00 2384 143 0.2452 0.2776 REMARK 3 3 6.0016 - 5.2510 1.00 2345 150 0.2647 0.3494 REMARK 3 4 5.2510 - 4.7746 1.00 2340 138 0.2323 0.3185 REMARK 3 5 4.7746 - 4.4344 1.00 2329 138 0.2230 0.2829 REMARK 3 6 4.4344 - 4.1743 1.00 2291 147 0.2421 0.3129 REMARK 3 7 4.1743 - 3.9661 1.00 2311 136 0.2487 0.3176 REMARK 3 8 3.9661 - 3.7941 1.00 2315 137 0.2442 0.3200 REMARK 3 9 3.7941 - 3.6485 1.00 2280 141 0.2591 0.2951 REMARK 3 10 3.6485 - 3.5229 0.99 2289 141 0.2669 0.3167 REMARK 3 11 3.5229 - 3.4131 0.99 2259 134 0.2916 0.3560 REMARK 3 12 3.4131 - 3.3157 0.99 2271 141 0.3259 0.3369 REMARK 3 13 3.3157 - 3.2286 0.99 2281 124 0.3509 0.4331 REMARK 3 14 3.2286 - 3.1500 0.98 2218 145 0.3786 0.4297 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.490 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 34.500 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 12722 REMARK 3 ANGLE : 1.331 18445 REMARK 3 CHIRALITY : 0.063 2084 REMARK 3 PLANARITY : 0.009 1319 REMARK 3 DIHEDRAL : 29.819 5252 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5CPJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 29-JUL-15. REMARK 100 THE DEPOSITION ID IS D_1000212009. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-DEC-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL41XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX225HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34975 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.150 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 5.900 REMARK 200 R MERGE (I) : 0.08700 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 11.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: 3AFA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.08 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.42 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: POTASSIUM CACODYLATE, POTASSIUM REMARK 280 CHLORIDE, MANGANESE CHLORIDE, PH 6.0, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 51.72600 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 86.72300 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 54.49500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 86.72300 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 51.72600 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 54.49500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DECAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DECAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 62980 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 71470 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -327.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F, G, H, I, J REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -3 REMARK 465 SER A -2 REMARK 465 HIS A -1 REMARK 465 MET A 0 REMARK 465 ALA A 1 REMARK 465 ARG A 2 REMARK 465 THR A 3 REMARK 465 LYS A 4 REMARK 465 GLN A 5 REMARK 465 THR A 6 REMARK 465 ALA A 7 REMARK 465 ARG A 8 REMARK 465 LYS A 9 REMARK 465 SER A 10 REMARK 465 THR A 11 REMARK 465 GLY A 12 REMARK 465 GLY A 13 REMARK 465 LYS A 14 REMARK 465 ALA A 15 REMARK 465 PRO A 16 REMARK 465 ARG A 17 REMARK 465 LYS A 18 REMARK 465 GLN A 19 REMARK 465 LEU A 20 REMARK 465 ALA A 21 REMARK 465 THR A 22 REMARK 465 LYS A 23 REMARK 465 ALA A 24 REMARK 465 ALA A 25 REMARK 465 ARG A 26 REMARK 465 LYS A 27 REMARK 465 SER A 28 REMARK 465 ALA A 29 REMARK 465 PRO A 30 REMARK 465 ALA A 31 REMARK 465 THR A 32 REMARK 465 GLY A 33 REMARK 465 GLY A 34 REMARK 465 VAL A 35 REMARK 465 LYS A 36 REMARK 465 LYS A 37 REMARK 465 PRO A 38 REMARK 465 HIS A 39 REMARK 465 ARG A 40 REMARK 465 ALA A 135 REMARK 465 GLY B -3 REMARK 465 SER B -2 REMARK 465 HIS B -1 REMARK 465 MET B 0 REMARK 465 SER B 1 REMARK 465 GLY B 2 REMARK 465 ARG B 3 REMARK 465 GLY B 4 REMARK 465 LYS B 5 REMARK 465 GLY B 6 REMARK 465 GLY B 7 REMARK 465 LYS B 8 REMARK 465 GLY B 9 REMARK 465 LEU B 10 REMARK 465 GLY B 11 REMARK 465 LYS B 12 REMARK 465 GLY B 13 REMARK 465 GLY B 14 REMARK 465 ALA B 15 REMARK 465 LYS B 16 REMARK 465 ARG B 17 REMARK 465 HIS B 18 REMARK 465 ARG B 19 REMARK 465 LYS B 20 REMARK 465 VAL B 21 REMARK 465 LEU B 22 REMARK 465 ARG B 23 REMARK 465 ASP B 24 REMARK 465 GLY C -3 REMARK 465 SER C -2 REMARK 465 HIS C -1 REMARK 465 MET C 0 REMARK 465 SER C 1 REMARK 465 GLY C 2 REMARK 465 ARG C 3 REMARK 465 GLY C 4 REMARK 465 LYS C 5 REMARK 465 GLN C 6 REMARK 465 GLY C 7 REMARK 465 GLY C 8 REMARK 465 LYS C 9 REMARK 465 ALA C 10 REMARK 465 ARG C 11 REMARK 465 ALA C 12 REMARK 465 LYS C 13 REMARK 465 LYS C 119 REMARK 465 THR C 120 REMARK 465 GLU C 121 REMARK 465 SER C 122 REMARK 465 HIS C 123 REMARK 465 HIS C 124 REMARK 465 LYS C 125 REMARK 465 ALA C 126 REMARK 465 LYS C 127 REMARK 465 GLY C 128 REMARK 465 LYS C 129 REMARK 465 GLY D -3 REMARK 465 SER D -2 REMARK 465 HIS D -1 REMARK 465 MET D 0 REMARK 465 PRO D 1 REMARK 465 GLU D 2 REMARK 465 PRO D 3 REMARK 465 ALA D 4 REMARK 465 LYS D 5 REMARK 465 SER D 6 REMARK 465 ALA D 7 REMARK 465 PRO D 8 REMARK 465 ALA D 9 REMARK 465 PRO D 10 REMARK 465 LYS D 11 REMARK 465 LYS D 12 REMARK 465 GLY D 13 REMARK 465 SER D 14 REMARK 465 LYS D 15 REMARK 465 LYS D 16 REMARK 465 ALA D 17 REMARK 465 VAL D 18 REMARK 465 THR D 19 REMARK 465 LYS D 20 REMARK 465 ALA D 21 REMARK 465 GLN D 22 REMARK 465 LYS D 23 REMARK 465 LYS D 24 REMARK 465 ASP D 25 REMARK 465 GLY D 26 REMARK 465 LYS D 27 REMARK 465 LYS D 28 REMARK 465 ARG D 29 REMARK 465 LYS D 30 REMARK 465 ARG D 31 REMARK 465 LYS D 125 REMARK 465 GLY E -3 REMARK 465 SER E -2 REMARK 465 HIS E -1 REMARK 465 MET E 0 REMARK 465 ALA E 1 REMARK 465 ARG E 2 REMARK 465 THR E 3 REMARK 465 LYS E 4 REMARK 465 GLN E 5 REMARK 465 THR E 6 REMARK 465 ALA E 7 REMARK 465 ARG E 8 REMARK 465 LYS E 9 REMARK 465 SER E 10 REMARK 465 THR E 11 REMARK 465 GLY E 12 REMARK 465 GLY E 13 REMARK 465 LYS E 14 REMARK 465 ALA E 15 REMARK 465 PRO E 16 REMARK 465 ARG E 17 REMARK 465 LYS E 18 REMARK 465 GLN E 19 REMARK 465 LEU E 20 REMARK 465 ALA E 21 REMARK 465 THR E 22 REMARK 465 LYS E 23 REMARK 465 ALA E 24 REMARK 465 ALA E 25 REMARK 465 ARG E 26 REMARK 465 LYS E 27 REMARK 465 SER E 28 REMARK 465 ALA E 29 REMARK 465 PRO E 30 REMARK 465 ALA E 31 REMARK 465 THR E 32 REMARK 465 GLY E 33 REMARK 465 GLY E 34 REMARK 465 VAL E 35 REMARK 465 LYS E 36 REMARK 465 LYS E 37 REMARK 465 ALA E 135 REMARK 465 GLY F -3 REMARK 465 SER F -2 REMARK 465 HIS F -1 REMARK 465 MET F 0 REMARK 465 SER F 1 REMARK 465 GLY F 2 REMARK 465 ARG F 3 REMARK 465 GLY F 4 REMARK 465 LYS F 5 REMARK 465 GLY F 6 REMARK 465 GLY F 7 REMARK 465 LYS F 8 REMARK 465 GLY F 9 REMARK 465 LEU F 10 REMARK 465 GLY F 11 REMARK 465 LYS F 12 REMARK 465 GLY F 13 REMARK 465 GLY F 14 REMARK 465 ALA F 15 REMARK 465 LYS F 16 REMARK 465 ARG F 17 REMARK 465 HIS F 18 REMARK 465 GLY G -3 REMARK 465 SER G -2 REMARK 465 HIS G -1 REMARK 465 MET G 0 REMARK 465 SER G 1 REMARK 465 GLY G 2 REMARK 465 ARG G 3 REMARK 465 GLY G 4 REMARK 465 LYS G 5 REMARK 465 GLN G 6 REMARK 465 GLY G 7 REMARK 465 GLY G 8 REMARK 465 LYS G 9 REMARK 465 ALA G 10 REMARK 465 ARG G 11 REMARK 465 ALA G 12 REMARK 465 LYS G 13 REMARK 465 ALA G 14 REMARK 465 LYS G 118 REMARK 465 LYS G 119 REMARK 465 THR G 120 REMARK 465 GLU G 121 REMARK 465 SER G 122 REMARK 465 HIS G 123 REMARK 465 HIS G 124 REMARK 465 LYS G 125 REMARK 465 ALA G 126 REMARK 465 LYS G 127 REMARK 465 GLY G 128 REMARK 465 LYS G 129 REMARK 465 GLY H -3 REMARK 465 SER H -2 REMARK 465 HIS H -1 REMARK 465 MET H 0 REMARK 465 PRO H 1 REMARK 465 GLU H 2 REMARK 465 PRO H 3 REMARK 465 ALA H 4 REMARK 465 LYS H 5 REMARK 465 SER H 6 REMARK 465 ALA H 7 REMARK 465 PRO H 8 REMARK 465 ALA H 9 REMARK 465 PRO H 10 REMARK 465 LYS H 11 REMARK 465 LYS H 12 REMARK 465 GLY H 13 REMARK 465 SER H 14 REMARK 465 LYS H 15 REMARK 465 LYS H 16 REMARK 465 ALA H 17 REMARK 465 VAL H 18 REMARK 465 THR H 19 REMARK 465 LYS H 20 REMARK 465 ALA H 21 REMARK 465 GLN H 22 REMARK 465 LYS H 23 REMARK 465 LYS H 24 REMARK 465 ASP H 25 REMARK 465 GLY H 26 REMARK 465 LYS H 27 REMARK 465 LYS H 28 REMARK 465 ARG H 29 REMARK 465 LYS H 30 REMARK 465 ARG H 31 REMARK 465 SER H 32 REMARK 465 LYS H 125 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG1 THR H 88 OP1 5CM J 40 1.85 REMARK 500 NH2 ARG E 63 O3' DA J 60 2.03 REMARK 500 O TYR C 39 OG SER D 78 2.04 REMARK 500 NH2 ARG G 32 OE2 GLU H 35 2.09 REMARK 500 OG1 THR A 58 OE1 GLN G 104 2.11 REMARK 500 NE2 GLN G 24 OE1 GLN H 47 2.12 REMARK 500 O ARG B 39 N GLY B 42 2.15 REMARK 500 OG1 THR A 118 NH1 ARG B 45 2.15 REMARK 500 O ARG F 39 N GLY F 42 2.16 REMARK 500 NH1 ARG B 39 O VAL B 43 2.16 REMARK 500 OG1 THR D 90 OE2 GLU D 93 2.18 REMARK 500 NZ LYS D 34 OP1 DG I 28 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O VAL D 48 OD2 ASP E 77 3555 2.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DA I 1 P DA I 1 OP3 -0.119 REMARK 500 DA I 29 O3' DA I 29 C3' -0.044 REMARK 500 DA J 1 P DA J 1 OP3 -0.126 REMARK 500 DT J 8 O3' DT J 8 C3' -0.065 REMARK 500 DT J 39 O3' DT J 39 C3' -0.047 REMARK 500 DA J 78 O3' DA J 78 C3' -0.051 REMARK 500 DT J 108 O3' DT J 108 C3' -0.037 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 49 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 ARG A 63 NE - CZ - NH2 ANGL. DEV. = -3.7 DEGREES REMARK 500 LEU D 106 CA - CB - CG ANGL. DEV. = 18.0 DEGREES REMARK 500 ARG G 71 CG - CD - NE ANGL. DEV. = 15.2 DEGREES REMARK 500 LEU H 100 CA - CB - CG ANGL. DEV. = -14.0 DEGREES REMARK 500 DC I 3 O4' - C1' - N1 ANGL. DEV. = 1.8 DEGREES REMARK 500 DA I 7 O4' - C1' - N9 ANGL. DEV. = 2.6 DEGREES REMARK 500 DG I 10 O4' - C1' - N9 ANGL. DEV. = 2.4 DEGREES REMARK 500 DG I 28 C3' - C2' - C1' ANGL. DEV. = -5.8 DEGREES REMARK 500 DG I 28 O4' - C1' - N9 ANGL. DEV. = 2.5 DEGREES REMARK 500 DA I 30 O4' - C1' - N9 ANGL. DEV. = 2.1 DEGREES REMARK 500 DG I 32 O4' - C1' - N9 ANGL. DEV. = 1.9 DEGREES REMARK 500 DG I 42 O4' - C1' - N9 ANGL. DEV. = 2.6 DEGREES REMARK 500 DT I 69 O4' - C1' - N1 ANGL. DEV. = 3.0 DEGREES REMARK 500 DG I 80 O5' - P - OP2 ANGL. DEV. = -5.8 DEGREES REMARK 500 DC I 81 O4' - C1' - N1 ANGL. DEV. = 2.3 DEGREES REMARK 500 DT I 82 O4' - C1' - N1 ANGL. DEV. = 2.0 DEGREES REMARK 500 DC I 83 O4' - C1' - N1 ANGL. DEV. = 2.4 DEGREES REMARK 500 DA I 90 O4' - C1' - N9 ANGL. DEV. = 2.6 DEGREES REMARK 500 DT I 94 O4' - C1' - N1 ANGL. DEV. = 2.9 DEGREES REMARK 500 DA I 140 O4' - C1' - N9 ANGL. DEV. = 1.8 DEGREES REMARK 500 DC J 9 O5' - P - OP2 ANGL. DEV. = -11.1 DEGREES REMARK 500 DT J 18 O4' - C1' - N1 ANGL. DEV. = 4.2 DEGREES REMARK 500 DC J 20 O4' - C1' - N1 ANGL. DEV. = 1.9 DEGREES REMARK 500 DT J 23 O4' - C1' - N1 ANGL. DEV. = 2.2 DEGREES REMARK 500 DT J 38 O4' - C1' - N1 ANGL. DEV. = 2.1 DEGREES REMARK 500 DT J 39 O4' - C1' - N1 ANGL. DEV. = 2.8 DEGREES REMARK 500 DT J 63 O4' - C1' - N1 ANGL. DEV. = 2.0 DEGREES REMARK 500 DT J 72 O4' - C1' - N1 ANGL. DEV. = 2.1 DEGREES REMARK 500 DA J 76 O4' - C1' - N9 ANGL. DEV. = 2.0 DEGREES REMARK 500 DT J 80 O4' - C1' - N1 ANGL. DEV. = 2.7 DEGREES REMARK 500 DA J 88 O4' - C1' - N9 ANGL. DEV. = 2.4 DEGREES REMARK 500 DT J 111 O4' - C1' - N1 ANGL. DEV. = 2.0 DEGREES REMARK 500 DC J 138 O4' - C1' - N1 ANGL. DEV. = 3.5 DEGREES REMARK 500 DT J 140 O4' - C1' - N1 ANGL. DEV. = 3.2 DEGREES REMARK 500 DT J 142 O4' - C1' - N1 ANGL. DEV. = 2.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 64 -120.16 36.91 REMARK 500 LYS A 115 10.37 82.97 REMARK 500 PRO C 109 75.11 -63.51 REMARK 500 LYS E 115 31.79 75.48 REMARK 500 PRO G 109 78.65 -63.63 REMARK 500 SER H 112 -70.65 -57.28 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 LEU A 65 PRO A 66 131.94 REMARK 500 LYS D 34 GLU D 35 -132.65 REMARK 500 ARG G 71 ASP G 72 123.20 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5CPI RELATED DB: PDB REMARK 900 RELATED ID: 5CPK RELATED DB: PDB DBREF 5CPJ A 0 135 UNP P68431 H31_HUMAN 1 136 DBREF 5CPJ B 0 102 UNP P62805 H4_HUMAN 1 103 DBREF 5CPJ C 0 129 UNP P04908 H2A1B_HUMAN 1 130 DBREF 5CPJ D 0 125 UNP P06899 H2B1J_HUMAN 1 126 DBREF 5CPJ E 0 135 UNP P68431 H31_HUMAN 1 136 DBREF 5CPJ F 0 102 UNP P62805 H4_HUMAN 1 103 DBREF 5CPJ G 0 129 UNP P04908 H2A1B_HUMAN 1 130 DBREF 5CPJ H 0 125 UNP P06899 H2B1J_HUMAN 1 126 DBREF 5CPJ I 1 146 PDB 5CPJ 5CPJ 1 146 DBREF 5CPJ J 1 146 PDB 5CPJ 5CPJ 1 146 SEQADV 5CPJ GLY A -3 UNP P68431 EXPRESSION TAG SEQADV 5CPJ SER A -2 UNP P68431 EXPRESSION TAG SEQADV 5CPJ HIS A -1 UNP P68431 EXPRESSION TAG SEQADV 5CPJ GLY B -3 UNP P62805 EXPRESSION TAG SEQADV 5CPJ SER B -2 UNP P62805 EXPRESSION TAG SEQADV 5CPJ HIS B -1 UNP P62805 EXPRESSION TAG SEQADV 5CPJ GLY C -3 UNP P04908 EXPRESSION TAG SEQADV 5CPJ SER C -2 UNP P04908 EXPRESSION TAG SEQADV 5CPJ HIS C -1 UNP P04908 EXPRESSION TAG SEQADV 5CPJ GLY D -3 UNP P06899 EXPRESSION TAG SEQADV 5CPJ SER D -2 UNP P06899 EXPRESSION TAG SEQADV 5CPJ HIS D -1 UNP P06899 EXPRESSION TAG SEQADV 5CPJ GLY E -3 UNP P68431 EXPRESSION TAG SEQADV 5CPJ SER E -2 UNP P68431 EXPRESSION TAG SEQADV 5CPJ HIS E -1 UNP P68431 EXPRESSION TAG SEQADV 5CPJ GLY F -3 UNP P62805 EXPRESSION TAG SEQADV 5CPJ SER F -2 UNP P62805 EXPRESSION TAG SEQADV 5CPJ HIS F -1 UNP P62805 EXPRESSION TAG SEQADV 5CPJ GLY G -3 UNP P04908 EXPRESSION TAG SEQADV 5CPJ SER G -2 UNP P04908 EXPRESSION TAG SEQADV 5CPJ HIS G -1 UNP P04908 EXPRESSION TAG SEQADV 5CPJ GLY H -3 UNP P06899 EXPRESSION TAG SEQADV 5CPJ SER H -2 UNP P06899 EXPRESSION TAG SEQADV 5CPJ HIS H -1 UNP P06899 EXPRESSION TAG SEQRES 1 A 139 GLY SER HIS MET ALA ARG THR LYS GLN THR ALA ARG LYS SEQRES 2 A 139 SER THR GLY GLY LYS ALA PRO ARG LYS GLN LEU ALA THR SEQRES 3 A 139 LYS ALA ALA ARG LYS SER ALA PRO ALA THR GLY GLY VAL SEQRES 4 A 139 LYS LYS PRO HIS ARG TYR ARG PRO GLY THR VAL ALA LEU SEQRES 5 A 139 ARG GLU ILE ARG ARG TYR GLN LYS SER THR GLU LEU LEU SEQRES 6 A 139 ILE ARG LYS LEU PRO PHE GLN ARG LEU VAL ARG GLU ILE SEQRES 7 A 139 ALA GLN ASP PHE LYS THR ASP LEU ARG PHE GLN SER SER SEQRES 8 A 139 ALA VAL MET ALA LEU GLN GLU ALA CYS GLU ALA TYR LEU SEQRES 9 A 139 VAL GLY LEU PHE GLU ASP THR ASN LEU CYS ALA ILE HIS SEQRES 10 A 139 ALA LYS ARG VAL THR ILE MET PRO LYS ASP ILE GLN LEU SEQRES 11 A 139 ALA ARG ARG ILE ARG GLY GLU ARG ALA SEQRES 1 B 106 GLY SER HIS MET SER GLY ARG GLY LYS GLY GLY LYS GLY SEQRES 2 B 106 LEU GLY LYS GLY GLY ALA LYS ARG HIS ARG LYS VAL LEU SEQRES 3 B 106 ARG ASP ASN ILE GLN GLY ILE THR LYS PRO ALA ILE ARG SEQRES 4 B 106 ARG LEU ALA ARG ARG GLY GLY VAL LYS ARG ILE SER GLY SEQRES 5 B 106 LEU ILE TYR GLU GLU THR ARG GLY VAL LEU LYS VAL PHE SEQRES 6 B 106 LEU GLU ASN VAL ILE ARG ASP ALA VAL THR TYR THR GLU SEQRES 7 B 106 HIS ALA LYS ARG LYS THR VAL THR ALA MET ASP VAL VAL SEQRES 8 B 106 TYR ALA LEU LYS ARG GLN GLY ARG THR LEU TYR GLY PHE SEQRES 9 B 106 GLY GLY SEQRES 1 C 133 GLY SER HIS MET SER GLY ARG GLY LYS GLN GLY GLY LYS SEQRES 2 C 133 ALA ARG ALA LYS ALA LYS THR ARG SER SER ARG ALA GLY SEQRES 3 C 133 LEU GLN PHE PRO VAL GLY ARG VAL HIS ARG LEU LEU ARG SEQRES 4 C 133 LYS GLY ASN TYR SER GLU ARG VAL GLY ALA GLY ALA PRO SEQRES 5 C 133 VAL TYR LEU ALA ALA VAL LEU GLU TYR LEU THR ALA GLU SEQRES 6 C 133 ILE LEU GLU LEU ALA GLY ASN ALA ALA ARG ASP ASN LYS SEQRES 7 C 133 LYS THR ARG ILE ILE PRO ARG HIS LEU GLN LEU ALA ILE SEQRES 8 C 133 ARG ASN ASP GLU GLU LEU ASN LYS LEU LEU GLY ARG VAL SEQRES 9 C 133 THR ILE ALA GLN GLY GLY VAL LEU PRO ASN ILE GLN ALA SEQRES 10 C 133 VAL LEU LEU PRO LYS LYS THR GLU SER HIS HIS LYS ALA SEQRES 11 C 133 LYS GLY LYS SEQRES 1 D 129 GLY SER HIS MET PRO GLU PRO ALA LYS SER ALA PRO ALA SEQRES 2 D 129 PRO LYS LYS GLY SER LYS LYS ALA VAL THR LYS ALA GLN SEQRES 3 D 129 LYS LYS ASP GLY LYS LYS ARG LYS ARG SER ARG LYS GLU SEQRES 4 D 129 SER TYR SER ILE TYR VAL TYR LYS VAL LEU LYS GLN VAL SEQRES 5 D 129 HIS PRO ASP THR GLY ILE SER SER LYS ALA MET GLY ILE SEQRES 6 D 129 MET ASN SER PHE VAL ASN ASP ILE PHE GLU ARG ILE ALA SEQRES 7 D 129 GLY GLU ALA SER ARG LEU ALA HIS TYR ASN LYS ARG SER SEQRES 8 D 129 THR ILE THR SER ARG GLU ILE GLN THR ALA VAL ARG LEU SEQRES 9 D 129 LEU LEU PRO GLY GLU LEU ALA LYS HIS ALA VAL SER GLU SEQRES 10 D 129 GLY THR LYS ALA VAL THR LYS TYR THR SER ALA LYS SEQRES 1 E 139 GLY SER HIS MET ALA ARG THR LYS GLN THR ALA ARG LYS SEQRES 2 E 139 SER THR GLY GLY LYS ALA PRO ARG LYS GLN LEU ALA THR SEQRES 3 E 139 LYS ALA ALA ARG LYS SER ALA PRO ALA THR GLY GLY VAL SEQRES 4 E 139 LYS LYS PRO HIS ARG TYR ARG PRO GLY THR VAL ALA LEU SEQRES 5 E 139 ARG GLU ILE ARG ARG TYR GLN LYS SER THR GLU LEU LEU SEQRES 6 E 139 ILE ARG LYS LEU PRO PHE GLN ARG LEU VAL ARG GLU ILE SEQRES 7 E 139 ALA GLN ASP PHE LYS THR ASP LEU ARG PHE GLN SER SER SEQRES 8 E 139 ALA VAL MET ALA LEU GLN GLU ALA CYS GLU ALA TYR LEU SEQRES 9 E 139 VAL GLY LEU PHE GLU ASP THR ASN LEU CYS ALA ILE HIS SEQRES 10 E 139 ALA LYS ARG VAL THR ILE MET PRO LYS ASP ILE GLN LEU SEQRES 11 E 139 ALA ARG ARG ILE ARG GLY GLU ARG ALA SEQRES 1 F 106 GLY SER HIS MET SER GLY ARG GLY LYS GLY GLY LYS GLY SEQRES 2 F 106 LEU GLY LYS GLY GLY ALA LYS ARG HIS ARG LYS VAL LEU SEQRES 3 F 106 ARG ASP ASN ILE GLN GLY ILE THR LYS PRO ALA ILE ARG SEQRES 4 F 106 ARG LEU ALA ARG ARG GLY GLY VAL LYS ARG ILE SER GLY SEQRES 5 F 106 LEU ILE TYR GLU GLU THR ARG GLY VAL LEU LYS VAL PHE SEQRES 6 F 106 LEU GLU ASN VAL ILE ARG ASP ALA VAL THR TYR THR GLU SEQRES 7 F 106 HIS ALA LYS ARG LYS THR VAL THR ALA MET ASP VAL VAL SEQRES 8 F 106 TYR ALA LEU LYS ARG GLN GLY ARG THR LEU TYR GLY PHE SEQRES 9 F 106 GLY GLY SEQRES 1 G 133 GLY SER HIS MET SER GLY ARG GLY LYS GLN GLY GLY LYS SEQRES 2 G 133 ALA ARG ALA LYS ALA LYS THR ARG SER SER ARG ALA GLY SEQRES 3 G 133 LEU GLN PHE PRO VAL GLY ARG VAL HIS ARG LEU LEU ARG SEQRES 4 G 133 LYS GLY ASN TYR SER GLU ARG VAL GLY ALA GLY ALA PRO SEQRES 5 G 133 VAL TYR LEU ALA ALA VAL LEU GLU TYR LEU THR ALA GLU SEQRES 6 G 133 ILE LEU GLU LEU ALA GLY ASN ALA ALA ARG ASP ASN LYS SEQRES 7 G 133 LYS THR ARG ILE ILE PRO ARG HIS LEU GLN LEU ALA ILE SEQRES 8 G 133 ARG ASN ASP GLU GLU LEU ASN LYS LEU LEU GLY ARG VAL SEQRES 9 G 133 THR ILE ALA GLN GLY GLY VAL LEU PRO ASN ILE GLN ALA SEQRES 10 G 133 VAL LEU LEU PRO LYS LYS THR GLU SER HIS HIS LYS ALA SEQRES 11 G 133 LYS GLY LYS SEQRES 1 H 129 GLY SER HIS MET PRO GLU PRO ALA LYS SER ALA PRO ALA SEQRES 2 H 129 PRO LYS LYS GLY SER LYS LYS ALA VAL THR LYS ALA GLN SEQRES 3 H 129 LYS LYS ASP GLY LYS LYS ARG LYS ARG SER ARG LYS GLU SEQRES 4 H 129 SER TYR SER ILE TYR VAL TYR LYS VAL LEU LYS GLN VAL SEQRES 5 H 129 HIS PRO ASP THR GLY ILE SER SER LYS ALA MET GLY ILE SEQRES 6 H 129 MET ASN SER PHE VAL ASN ASP ILE PHE GLU ARG ILE ALA SEQRES 7 H 129 GLY GLU ALA SER ARG LEU ALA HIS TYR ASN LYS ARG SER SEQRES 8 H 129 THR ILE THR SER ARG GLU ILE GLN THR ALA VAL ARG LEU SEQRES 9 H 129 LEU LEU PRO GLY GLU LEU ALA LYS HIS ALA VAL SER GLU SEQRES 10 H 129 GLY THR LYS ALA VAL THR LYS TYR THR SER ALA LYS SEQRES 1 I 146 DA DT DC DC DA DA DA DT DG DG DA DT DT SEQRES 2 I 146 5CM DG DA DA DT DG DG DA DA DT DC DA DT SEQRES 3 I 146 DT DG DA DA DT DG DG DA DA DA DT DG DA SEQRES 4 I 146 DA DT DG DG DA DA DT DC DA DT DT DG DG SEQRES 5 I 146 DT DT DG DG DA DC DT DC DA DA DA DT DG SEQRES 6 I 146 DG DA DA DT DT DT DT 5CM DG DA DA DC DA SEQRES 7 I 146 DG DG DC DT DC DA DA DA DT DG DG DA DA SEQRES 8 I 146 DT DC DT DT 5CM DG DA DA DT DG DG DA DT SEQRES 9 I 146 DT 5CM DG DA DA DT DG DT DA DA DT DC DA SEQRES 10 I 146 DT DT DT DT 5CM DG DA DA DT DG DG DA DT SEQRES 11 I 146 DT 5CM DG DA DA DT DG DG DA DA DT DC DT SEQRES 12 I 146 DG DA DT SEQRES 1 J 146 DA DT DC DA DG DA DT DT DC DC DA DT DT SEQRES 2 J 146 5CM DG DA DA DT DC DC DA DT DT 5CM DG DA SEQRES 3 J 146 DA DA DA DT DG DA DT DT DA DC DA DT DT SEQRES 4 J 146 5CM DG DA DA DT DC DC DA DT DT 5CM DG DA SEQRES 5 J 146 DA DG DA DT DT DC DC DA DT DT DT DG DA SEQRES 6 J 146 DG DC DC DT DG DT DT 5CM DG DA DA DA DA SEQRES 7 J 146 DT DT DC DC DA DT DT DT DG DA DG DT DC SEQRES 8 J 146 DC DA DA DC DC DA DA DT DG DA DT DT DC SEQRES 9 J 146 DC DA DT DT DC DA DT DT DT DC DC DA DT SEQRES 10 J 146 DT DC DA DA DT DG DA DT DT DC DC DA DT SEQRES 11 J 146 DT 5CM DG DA DA DT DC DC DA DT DT DT DG SEQRES 12 J 146 DG DA DT HET 5CM I 14 20 HET 5CM I 73 20 HET 5CM I 96 20 HET 5CM I 106 20 HET 5CM I 122 20 HET 5CM I 132 20 HET 5CM J 14 20 HET 5CM J 24 20 HET 5CM J 40 20 HET 5CM J 50 20 HET 5CM J 73 20 HET 5CM J 132 20 HETNAM 5CM 5-METHYL-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE FORMUL 9 5CM 12(C10 H16 N3 O7 P) HELIX 1 AA1 GLY A 44 LYS A 56 1 13 HELIX 2 AA2 LEU A 65 ASP A 77 1 13 HELIX 3 AA3 GLN A 85 ALA A 114 1 30 HELIX 4 AA4 MET A 120 ARG A 131 1 12 HELIX 5 AA5 THR B 30 GLY B 41 1 12 HELIX 6 AA6 LEU B 49 ALA B 76 1 28 HELIX 7 AA7 THR B 82 GLY B 94 1 13 HELIX 8 AA8 THR C 16 ALA C 21 1 6 HELIX 9 AA9 PRO C 26 GLY C 37 1 12 HELIX 10 AB1 GLY C 46 ASN C 73 1 28 HELIX 11 AB2 ILE C 79 ASP C 90 1 12 HELIX 12 AB3 ASP C 90 LEU C 97 1 8 HELIX 13 AB4 GLN C 112 LEU C 116 5 5 HELIX 14 AB5 TYR D 37 HIS D 49 1 13 HELIX 15 AB6 SER D 55 ASN D 84 1 30 HELIX 16 AB7 THR D 90 LEU D 102 1 13 HELIX 17 AB8 PRO D 103 THR D 122 1 20 HELIX 18 AB9 GLY E 44 LYS E 56 1 13 HELIX 19 AC1 ARG E 63 ASP E 77 1 15 HELIX 20 AC2 GLN E 85 ALA E 114 1 30 HELIX 21 AC3 MET E 120 ARG E 131 1 12 HELIX 22 AC4 THR F 30 ARG F 40 1 11 HELIX 23 AC5 LEU F 49 ALA F 76 1 28 HELIX 24 AC6 THR F 82 GLN F 93 1 12 HELIX 25 AC7 THR G 16 ALA G 21 1 6 HELIX 26 AC8 PRO G 26 LYS G 36 1 11 HELIX 27 AC9 GLY G 46 ARG G 71 1 26 HELIX 28 AD1 ILE G 79 ASP G 90 1 12 HELIX 29 AD2 ASP G 90 LEU G 97 1 8 HELIX 30 AD3 GLN G 112 LEU G 116 5 5 HELIX 31 AD4 TYR H 37 HIS H 49 1 13 HELIX 32 AD5 SER H 55 ASN H 84 1 30 HELIX 33 AD6 THR H 90 LEU H 102 1 13 HELIX 34 AD7 PRO H 103 ALA H 124 1 22 SHEET 1 AA1 2 ARG A 83 PHE A 84 0 SHEET 2 AA1 2 THR B 80 VAL B 81 1 O VAL B 81 N ARG A 83 SHEET 1 AA2 2 THR A 118 ILE A 119 0 SHEET 2 AA2 2 ARG B 45 ILE B 46 1 O ARG B 45 N ILE A 119 SHEET 1 AA3 2 THR B 96 TYR B 98 0 SHEET 2 AA3 2 VAL G 100 ILE G 102 1 O THR G 101 N TYR B 98 SHEET 1 AA4 2 ARG C 42 VAL C 43 0 SHEET 2 AA4 2 THR D 88 ILE D 89 1 O ILE D 89 N ARG C 42 SHEET 1 AA5 2 ARG C 77 ILE C 78 0 SHEET 2 AA5 2 GLY D 53 ILE D 54 1 O GLY D 53 N ILE C 78 SHEET 1 AA6 2 VAL C 100 ILE C 102 0 SHEET 2 AA6 2 THR F 96 TYR F 98 1 O TYR F 98 N THR C 101 SHEET 1 AA7 2 ARG E 83 PHE E 84 0 SHEET 2 AA7 2 THR F 80 VAL F 81 1 O VAL F 81 N ARG E 83 SHEET 1 AA8 2 THR E 118 ILE E 119 0 SHEET 2 AA8 2 ARG F 45 ILE F 46 1 O ARG F 45 N ILE E 119 SHEET 1 AA9 2 ARG G 42 VAL G 43 0 SHEET 2 AA9 2 THR H 88 ILE H 89 1 O ILE H 89 N ARG G 42 LINK O3' DT I 13 P 5CM I 14 1555 1555 1.61 LINK O3' 5CM I 14 P DG I 15 1555 1555 1.61 LINK O3' DT I 72 P 5CM I 73 1555 1555 1.61 LINK O3' 5CM I 73 P DG I 74 1555 1555 1.61 LINK O3' DT I 95 P 5CM I 96 1555 1555 1.61 LINK O3' 5CM I 96 P DG I 97 1555 1555 1.61 LINK O3' DT I 105 P 5CM I 106 1555 1555 1.60 LINK O3' 5CM I 106 P DG I 107 1555 1555 1.60 LINK O3' DT I 121 P 5CM I 122 1555 1555 1.60 LINK O3' 5CM I 122 P DG I 123 1555 1555 1.61 LINK O3' DT I 131 P 5CM I 132 1555 1555 1.61 LINK O3' 5CM I 132 P DG I 133 1555 1555 1.60 LINK O3' DT J 13 P 5CM J 14 1555 1555 1.61 LINK O3' 5CM J 14 P DG J 15 1555 1555 1.61 LINK O3' DT J 23 P 5CM J 24 1555 1555 1.61 LINK O3' 5CM J 24 P DG J 25 1555 1555 1.62 LINK O3' DT J 39 P 5CM J 40 1555 1555 1.59 LINK O3' 5CM J 40 P DG J 41 1555 1555 1.61 LINK O3' DT J 49 P 5CM J 50 1555 1555 1.61 LINK O3' 5CM J 50 P DG J 51 1555 1555 1.62 LINK O3' DT J 72 P 5CM J 73 1555 1555 1.61 LINK O3' 5CM J 73 P DG J 74 1555 1555 1.61 LINK O3' DT J 131 P 5CM J 132 1555 1555 1.61 LINK O3' 5CM J 132 P DG J 133 1555 1555 1.61 CISPEP 1 ARG H 33 LYS H 34 0 1.18 CRYST1 103.452 108.990 173.446 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009666 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009175 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005765 0.00000