PDB Short entry for 5CVE
HEADER    TRANSFERASE/PEPTIDE                     26-JUL-15   5CVE              
TITLE     CRYSTAL STRUCTURE OF HUMAN NRMT1 IN COMPLEX WITH DIMETHYLATED FLY H2B 
TITLE    2 PEPTIDE AND SAH                                                      
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: N-TERMINAL XAA-PRO-LYS N-METHYLTRANSFERASE 1;              
COMPND   3 CHAIN: A, B;                                                         
COMPND   4 SYNONYM: ALPHA N-TERMINAL PROTEIN METHYLTRANSFERASE 1A,              
COMPND   5 METHYLTRANSFERASE-LIKE PROTEIN 11A,N-TERMINAL RCC1 METHYLTRANSFERASE,
COMPND   6 X-PRO-LYS N-TERMINAL PROTEIN METHYLTRANSFERASE 1A,NTM1A;             
COMPND   7 EC: 2.1.1.244;                                                       
COMPND   8 ENGINEERED: YES;                                                     
COMPND   9 MOL_ID: 2;                                                           
COMPND  10 MOLECULE: N-TERMINAL PEPTIDE FROM HISTONE H2B;                       
COMPND  11 CHAIN: D, E;                                                         
COMPND  12 FRAGMENT: UNP RESIDUES 2-10;                                         
COMPND  13 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   3 ORGANISM_COMMON: HUMAN;                                              
SOURCE   4 ORGANISM_TAXID: 9606;                                                
SOURCE   5 GENE: NTMT1,NRMT1;                                                   
SOURCE   6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3);                       
SOURCE   7 EXPRESSION_SYSTEM_TAXID: 469008;                                     
SOURCE   8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3);                                 
SOURCE   9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;                              
SOURCE  10 EXPRESSION_SYSTEM_PLASMID: PET28B;                                   
SOURCE  11 MOL_ID: 2;                                                           
SOURCE  12 SYNTHETIC: YES;                                                      
SOURCE  13 ORGANISM_SCIENTIFIC: DROSOPHILA MELANOGASTER;                        
SOURCE  14 ORGANISM_COMMON: FRUIT FLY;                                          
SOURCE  15 ORGANISM_TAXID: 7227                                                 
KEYWDS    N-TERMINAL METHYLTRANSFERASE, TRANSFERASE-PEPTIDE COMPLEX             
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    R.WU,H.LI                                                             
REVDAT   3   27-SEP-17 5CVE    1       JRNL   REMARK                            
REVDAT   2   02-DEC-15 5CVE    1       JRNL                                     
REVDAT   1   25-NOV-15 5CVE    0                                                
JRNL        AUTH   R.WU,Y.YUE,X.ZHENG,H.LI                                      
JRNL        TITL   MOLECULAR BASIS FOR HISTONE N-TERMINAL METHYLATION BY NRMT1  
JRNL        REF    GENES DEV.                    V.  29  2337 2015              
JRNL        REFN                   ISSN 0890-9369                               
JRNL        PMID   26543159                                                     
JRNL        DOI    10.1101/GAD.270926.115                                       
REMARK   2                                                                      
REMARK   2 RESOLUTION.    1.50 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : PHENIX 1.9_1692                                      
REMARK   3   AUTHORS     : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN            
REMARK   3               : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE,           
REMARK   3               : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER,            
REMARK   3               : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY,              
REMARK   3               : REETAL PAI,RANDY READ,JANE RICHARDSON,               
REMARK   3               : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI,           
REMARK   3               : NICHOLAS SAUTER,JACOB SMITH,LAURENT                  
REMARK   3               : STORONI,TOM TERWILLIGER,PETER ZWART                  
REMARK   3                                                                      
REMARK   3    REFINEMENT TARGET : ML                                            
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 32.12                          
REMARK   3   MIN(FOBS/SIGMA_FOBS)              : 1.370                          
REMARK   3   COMPLETENESS FOR RANGE        (%) : 99.1                           
REMARK   3   NUMBER OF REFLECTIONS             : 78787                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   R VALUE     (WORKING + TEST SET) : 0.153                           
REMARK   3   R VALUE            (WORKING SET) : 0.153                           
REMARK   3   FREE R VALUE                     : 0.180                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 3.010                           
REMARK   3   FREE R VALUE TEST SET COUNT      : 2371                            
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT (IN BINS).                           
REMARK   3   BIN  RESOLUTION RANGE  COMPL.    NWORK NFREE   RWORK  RFREE        
REMARK   3     1 32.1255 -  3.8502    1.00     4662   128  0.1353 0.1536        
REMARK   3     2  3.8502 -  3.0568    1.00     4590   127  0.1347 0.1383        
REMARK   3     3  3.0568 -  2.6706    1.00     4509   151  0.1530 0.1861        
REMARK   3     4  2.6706 -  2.4265    1.00     4569   152  0.1574 0.1880        
REMARK   3     5  2.4265 -  2.2526    1.00     4530   123  0.1542 0.1718        
REMARK   3     6  2.2526 -  2.1199    1.00     4492   162  0.1439 0.1836        
REMARK   3     7  2.1199 -  2.0137    0.99     4503   123  0.1453 0.1511        
REMARK   3     8  2.0137 -  1.9261    0.99     4519   134  0.1541 0.1916        
REMARK   3     9  1.9261 -  1.8519    0.99     4481   146  0.1643 0.2103        
REMARK   3    10  1.8519 -  1.7880    0.99     4467   149  0.1683 0.2236        
REMARK   3    11  1.7880 -  1.7321    0.99     4440   150  0.1686 0.1999        
REMARK   3    12  1.7321 -  1.6826    0.99     4483   138  0.1679 0.1720        
REMARK   3    13  1.6826 -  1.6383    0.99     4468   141  0.1755 0.2518        
REMARK   3    14  1.6383 -  1.5983    0.99     4424   152  0.1779 0.2082        
REMARK   3    15  1.5983 -  1.5620    0.98     4441   130  0.1892 0.2568        
REMARK   3    16  1.5620 -  1.5288    0.98     4431   126  0.2021 0.2301        
REMARK   3    17  1.5288 -  1.4982    0.97     4407   139  0.2105 0.2453        
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELLING.                                             
REMARK   3   METHOD USED        : FLAT BULK SOLVENT MODEL                       
REMARK   3   SOLVENT RADIUS     : 1.11                                          
REMARK   3   SHRINKAGE RADIUS   : 0.90                                          
REMARK   3   K_SOL              : NULL                                          
REMARK   3   B_SOL              : NULL                                          
REMARK   3                                                                      
REMARK   3  ERROR ESTIMATES.                                                    
REMARK   3   COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED)     : 0.140            
REMARK   3   PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.430           
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : 14.17                          
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : 17.95                          
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : NULL                                                 
REMARK   3    B22 (A**2) : NULL                                                 
REMARK   3    B33 (A**2) : NULL                                                 
REMARK   3    B12 (A**2) : NULL                                                 
REMARK   3    B13 (A**2) : NULL                                                 
REMARK   3    B23 (A**2) : NULL                                                 
REMARK   3                                                                      
REMARK   3  TWINNING INFORMATION.                                               
REMARK   3   FRACTION: NULL                                                     
REMARK   3   OPERATOR: NULL                                                     
REMARK   3                                                                      
REMARK   3  DEVIATIONS FROM IDEAL VALUES.                                       
REMARK   3                 RMSD          COUNT                                  
REMARK   3   BOND      :  0.005           3906                                  
REMARK   3   ANGLE     :  1.050           5291                                  
REMARK   3   CHIRALITY :  0.075            581                                  
REMARK   3   PLANARITY :  0.005            682                                  
REMARK   3   DIHEDRAL  : 12.952           1486                                  
REMARK   3                                                                      
REMARK   3  TLS DETAILS                                                         
REMARK   3   NUMBER OF TLS GROUPS  : NULL                                       
REMARK   3                                                                      
REMARK   3  NCS DETAILS                                                         
REMARK   3   NUMBER OF NCS GROUPS : NULL                                        
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 5CVE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 30-JUL-15.                  
REMARK 100 THE DEPOSITION ID IS D_1000212228.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 10-JUN-15                          
REMARK 200  TEMPERATURE           (KELVIN) : 100                                
REMARK 200  PH                             : 5.7                                
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : SSRF                               
REMARK 200  BEAMLINE                       : BL17U                              
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 0.97914                            
REMARK 200  MONOCHROMATOR                  : DOUBLE CRYSTAL, SI(111)            
REMARK 200  OPTICS                         : ADSC QUANTUM 315R                  
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : CCD                                
REMARK 200  DETECTOR MANUFACTURER          : ADSC QUANTUM 315R                  
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : SCALA                              
REMARK 200  DATA SCALING SOFTWARE          : HKL-2000                           
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 78798                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 1.500                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 50.000                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : NULL                               
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 99.2                               
REMARK 200  DATA REDUNDANCY                : 7.300                              
REMARK 200  R MERGE                    (I) : 0.09700                            
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 7.8000                             
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 1.53                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 98.0                               
REMARK 200  DATA REDUNDANCY IN SHELL       : 7.30                               
REMARK 200  R MERGE FOR SHELL          (I) : 0.81700                            
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : NULL                               
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL                         
REMARK 200 SOFTWARE USED: NULL                                                  
REMARK 200 STARTING MODEL: NULL                                                 
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 43.78                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.19                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M (NH4)AC, 0.1 M SODIUM CITRATE      
REMARK 280  TRIBASIC DIHYDRATE, 24%(W/V) PEG 4000, PH 5.7, VAPOR DIFFUSION,     
REMARK 280  SITTING DROP, TEMPERATURE 291K                                      
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1                          
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -X,Y,-Z                                                 
REMARK 290       3555   X+1/2,Y+1/2,Z                                           
REMARK 290       4555   -X+1/2,Y+1/2,-Z                                         
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   2  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000 -1.000000        0.00000            
REMARK 290   SMTRY1   3  1.000000  0.000000  0.000000       57.41800            
REMARK 290   SMTRY2   3  0.000000  1.000000  0.000000       33.15100            
REMARK 290   SMTRY3   3  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   4 -1.000000  0.000000  0.000000       57.41800            
REMARK 290   SMTRY2   4  0.000000  1.000000  0.000000       33.15100            
REMARK 290   SMTRY3   4  0.000000  0.000000 -1.000000        0.00000            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1, 2                                                    
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC                           
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC                    
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 TOTAL BURIED SURFACE AREA: 910 ANGSTROM**2                           
REMARK 350 SURFACE AREA OF THE COMPLEX: 11370 ANGSTROM**2                       
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -5.0 KCAL/MOL                         
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D                                  
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 2                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC                           
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC                    
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 TOTAL BURIED SURFACE AREA: 930 ANGSTROM**2                           
REMARK 350 SURFACE AREA OF THE COMPLEX: 10400 ANGSTROM**2                       
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -6.0 KCAL/MOL                         
REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, E                                  
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 375                                                                      
REMARK 375 SPECIAL POSITION                                                     
REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS            
REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL          
REMARK 375 POSITIONS.                                                           
REMARK 375                                                                      
REMARK 375 ATOM RES CSSEQI                                                      
REMARK 375      HOH A 641  LIES ON A SPECIAL POSITION.                          
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     MET A   -19                                                      
REMARK 465     GLY A   -18                                                      
REMARK 465     SER A   -17                                                      
REMARK 465     SER A   -16                                                      
REMARK 465     HIS A   -15                                                      
REMARK 465     HIS A   -14                                                      
REMARK 465     HIS A   -13                                                      
REMARK 465     HIS A   -12                                                      
REMARK 465     HIS A   -11                                                      
REMARK 465     HIS A   -10                                                      
REMARK 465     SER A    -9                                                      
REMARK 465     SER A    -8                                                      
REMARK 465     MET B   -19                                                      
REMARK 465     GLY B   -18                                                      
REMARK 465     SER B   -17                                                      
REMARK 465     SER B   -16                                                      
REMARK 465     HIS B   -15                                                      
REMARK 465     HIS B   -14                                                      
REMARK 465     HIS B   -13                                                      
REMARK 465     HIS B   -12                                                      
REMARK 465     HIS B   -11                                                      
REMARK 465     HIS B   -10                                                      
REMARK 465     SER B    -9                                                      
REMARK 465     SER B    -8                                                      
REMARK 465     GLY B    -7                                                      
REMARK 465     LEU B    -6                                                      
REMARK 465     VAL B    -5                                                      
REMARK 465     PRO B    -4                                                      
REMARK 465     ARG B    -3                                                      
REMARK 465     ALA D     9                                                      
REMARK 465     LYS E     7                                                      
REMARK 465     ALA E     8                                                      
REMARK 465     ALA E     9                                                      
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT                     
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.                            
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI           DISTANCE          
REMARK 500   O    HOH A   643     O    HOH A   755              2.18            
REMARK 500   O    HOH B   441     O    HOH B   705              2.19            
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS                                             
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC             
REMARK 500 SYMMETRY ARE IN CLOSE CONTACT.  AN ATOM LOCATED WITHIN 0.15          
REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A           
REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375             
REMARK 500 INSTEAD OF REMARK 500.  ATOMS WITH NON-BLANK ALTERNATE               
REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS.            
REMARK 500                                                                      
REMARK 500 DISTANCE CUTOFF:                                                     
REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS              
REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS                  
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI  SSYMOP   DISTANCE          
REMARK 500   O    HOH A   607     O    HOH B   408     4454     2.13            
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    VAL A 137      -14.85   -150.87                                   
REMARK 500    SER A 181       64.63     61.85                                   
REMARK 500    VAL B 137      -17.78   -149.47                                   
REMARK 500    SER B 181       64.50     60.42                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 525                                                                      
REMARK 525 SOLVENT                                                              
REMARK 525                                                                      
REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT                    
REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST                  
REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT                 
REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE                       
REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER;                             
REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE                  
REMARK 525 NUMBER; I=INSERTION CODE):                                           
REMARK 525                                                                      
REMARK 525  M RES CSSEQI                                                        
REMARK 525    HOH B 761        DISTANCE =  6.48 ANGSTROMS                       
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue SAH A 301                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC2                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue SAH B 301                 
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 5CVD   RELATED DB: PDB                                   
DBREF  5CVE A    1   223  UNP    Q9BV86   NTM1A_HUMAN      1    223             
DBREF  5CVE B    1   223  UNP    Q9BV86   NTM1A_HUMAN      1    223             
DBREF  5CVE D    1     9  UNP    P02283   H2B_DROME        2     10             
DBREF  5CVE E    1     9  UNP    P02283   H2B_DROME        2     10             
SEQADV 5CVE MET A  -19  UNP  Q9BV86              EXPRESSION TAG                 
SEQADV 5CVE GLY A  -18  UNP  Q9BV86              EXPRESSION TAG                 
SEQADV 5CVE SER A  -17  UNP  Q9BV86              EXPRESSION TAG                 
SEQADV 5CVE SER A  -16  UNP  Q9BV86              EXPRESSION TAG                 
SEQADV 5CVE HIS A  -15  UNP  Q9BV86              EXPRESSION TAG                 
SEQADV 5CVE HIS A  -14  UNP  Q9BV86              EXPRESSION TAG                 
SEQADV 5CVE HIS A  -13  UNP  Q9BV86              EXPRESSION TAG                 
SEQADV 5CVE HIS A  -12  UNP  Q9BV86              EXPRESSION TAG                 
SEQADV 5CVE HIS A  -11  UNP  Q9BV86              EXPRESSION TAG                 
SEQADV 5CVE HIS A  -10  UNP  Q9BV86              EXPRESSION TAG                 
SEQADV 5CVE SER A   -9  UNP  Q9BV86              EXPRESSION TAG                 
SEQADV 5CVE SER A   -8  UNP  Q9BV86              EXPRESSION TAG                 
SEQADV 5CVE GLY A   -7  UNP  Q9BV86              EXPRESSION TAG                 
SEQADV 5CVE LEU A   -6  UNP  Q9BV86              EXPRESSION TAG                 
SEQADV 5CVE VAL A   -5  UNP  Q9BV86              EXPRESSION TAG                 
SEQADV 5CVE PRO A   -4  UNP  Q9BV86              EXPRESSION TAG                 
SEQADV 5CVE ARG A   -3  UNP  Q9BV86              EXPRESSION TAG                 
SEQADV 5CVE GLY A   -2  UNP  Q9BV86              EXPRESSION TAG                 
SEQADV 5CVE SER A   -1  UNP  Q9BV86              EXPRESSION TAG                 
SEQADV 5CVE HIS A    0  UNP  Q9BV86              EXPRESSION TAG                 
SEQADV 5CVE MET B  -19  UNP  Q9BV86              EXPRESSION TAG                 
SEQADV 5CVE GLY B  -18  UNP  Q9BV86              EXPRESSION TAG                 
SEQADV 5CVE SER B  -17  UNP  Q9BV86              EXPRESSION TAG                 
SEQADV 5CVE SER B  -16  UNP  Q9BV86              EXPRESSION TAG                 
SEQADV 5CVE HIS B  -15  UNP  Q9BV86              EXPRESSION TAG                 
SEQADV 5CVE HIS B  -14  UNP  Q9BV86              EXPRESSION TAG                 
SEQADV 5CVE HIS B  -13  UNP  Q9BV86              EXPRESSION TAG                 
SEQADV 5CVE HIS B  -12  UNP  Q9BV86              EXPRESSION TAG                 
SEQADV 5CVE HIS B  -11  UNP  Q9BV86              EXPRESSION TAG                 
SEQADV 5CVE HIS B  -10  UNP  Q9BV86              EXPRESSION TAG                 
SEQADV 5CVE SER B   -9  UNP  Q9BV86              EXPRESSION TAG                 
SEQADV 5CVE SER B   -8  UNP  Q9BV86              EXPRESSION TAG                 
SEQADV 5CVE GLY B   -7  UNP  Q9BV86              EXPRESSION TAG                 
SEQADV 5CVE LEU B   -6  UNP  Q9BV86              EXPRESSION TAG                 
SEQADV 5CVE VAL B   -5  UNP  Q9BV86              EXPRESSION TAG                 
SEQADV 5CVE PRO B   -4  UNP  Q9BV86              EXPRESSION TAG                 
SEQADV 5CVE ARG B   -3  UNP  Q9BV86              EXPRESSION TAG                 
SEQADV 5CVE GLY B   -2  UNP  Q9BV86              EXPRESSION TAG                 
SEQADV 5CVE SER B   -1  UNP  Q9BV86              EXPRESSION TAG                 
SEQADV 5CVE HIS B    0  UNP  Q9BV86              EXPRESSION TAG                 
SEQRES   1 A  243  MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY          
SEQRES   2 A  243  LEU VAL PRO ARG GLY SER HIS MET THR SER GLU VAL ILE          
SEQRES   3 A  243  GLU ASP GLU LYS GLN PHE TYR SER LYS ALA LYS THR TYR          
SEQRES   4 A  243  TRP LYS GLN ILE PRO PRO THR VAL ASP GLY MET LEU GLY          
SEQRES   5 A  243  GLY TYR GLY HIS ILE SER SER ILE ASP ILE ASN SER SER          
SEQRES   6 A  243  ARG LYS PHE LEU GLN ARG PHE LEU ARG GLU GLY PRO ASN          
SEQRES   7 A  243  LYS THR GLY THR SER CYS ALA LEU ASP CYS GLY ALA GLY          
SEQRES   8 A  243  ILE GLY ARG ILE THR LYS ARG LEU LEU LEU PRO LEU PHE          
SEQRES   9 A  243  ARG GLU VAL ASP MET VAL ASP ILE THR GLU ASP PHE LEU          
SEQRES  10 A  243  VAL GLN ALA LYS THR TYR LEU GLY GLU GLU GLY LYS ARG          
SEQRES  11 A  243  VAL ARG ASN TYR PHE CYS CYS GLY LEU GLN ASP PHE THR          
SEQRES  12 A  243  PRO GLU PRO ASP SER TYR ASP VAL ILE TRP ILE GLN TRP          
SEQRES  13 A  243  VAL ILE GLY HIS LEU THR ASP GLN HIS LEU ALA GLU PHE          
SEQRES  14 A  243  LEU ARG ARG CYS LYS GLY SER LEU ARG PRO ASN GLY ILE          
SEQRES  15 A  243  ILE VAL ILE LYS ASP ASN MET ALA GLN GLU GLY VAL ILE          
SEQRES  16 A  243  LEU ASP ASP VAL ASP SER SER VAL CYS ARG ASP LEU ASP          
SEQRES  17 A  243  VAL VAL ARG ARG ILE ILE CYS SER ALA GLY LEU SER LEU          
SEQRES  18 A  243  LEU ALA GLU GLU ARG GLN GLU ASN LEU PRO ASP GLU ILE          
SEQRES  19 A  243  TYR HIS VAL TYR SER PHE ALA LEU ARG                          
SEQRES   1 B  243  MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY          
SEQRES   2 B  243  LEU VAL PRO ARG GLY SER HIS MET THR SER GLU VAL ILE          
SEQRES   3 B  243  GLU ASP GLU LYS GLN PHE TYR SER LYS ALA LYS THR TYR          
SEQRES   4 B  243  TRP LYS GLN ILE PRO PRO THR VAL ASP GLY MET LEU GLY          
SEQRES   5 B  243  GLY TYR GLY HIS ILE SER SER ILE ASP ILE ASN SER SER          
SEQRES   6 B  243  ARG LYS PHE LEU GLN ARG PHE LEU ARG GLU GLY PRO ASN          
SEQRES   7 B  243  LYS THR GLY THR SER CYS ALA LEU ASP CYS GLY ALA GLY          
SEQRES   8 B  243  ILE GLY ARG ILE THR LYS ARG LEU LEU LEU PRO LEU PHE          
SEQRES   9 B  243  ARG GLU VAL ASP MET VAL ASP ILE THR GLU ASP PHE LEU          
SEQRES  10 B  243  VAL GLN ALA LYS THR TYR LEU GLY GLU GLU GLY LYS ARG          
SEQRES  11 B  243  VAL ARG ASN TYR PHE CYS CYS GLY LEU GLN ASP PHE THR          
SEQRES  12 B  243  PRO GLU PRO ASP SER TYR ASP VAL ILE TRP ILE GLN TRP          
SEQRES  13 B  243  VAL ILE GLY HIS LEU THR ASP GLN HIS LEU ALA GLU PHE          
SEQRES  14 B  243  LEU ARG ARG CYS LYS GLY SER LEU ARG PRO ASN GLY ILE          
SEQRES  15 B  243  ILE VAL ILE LYS ASP ASN MET ALA GLN GLU GLY VAL ILE          
SEQRES  16 B  243  LEU ASP ASP VAL ASP SER SER VAL CYS ARG ASP LEU ASP          
SEQRES  17 B  243  VAL VAL ARG ARG ILE ILE CYS SER ALA GLY LEU SER LEU          
SEQRES  18 B  243  LEU ALA GLU GLU ARG GLN GLU ASN LEU PRO ASP GLU ILE          
SEQRES  19 B  243  TYR HIS VAL TYR SER PHE ALA LEU ARG                          
SEQRES   1 D    9  PBE PRO LYS THR SER GLY LYS ALA ALA                          
SEQRES   1 E    9  PBE PRO LYS THR SER GLY LYS ALA ALA                          
MODRES 5CVE PBE D    1  PRO  MODIFIED RESIDUE                                   
MODRES 5CVE PBE E    1  PRO  MODIFIED RESIDUE                                   
HET    PBE  D   1       9                                                       
HET    PBE  E   1       9                                                       
HET    SAH  A 301      26                                                       
HET    SAH  B 301      26                                                       
HETNAM     PBE 1,1-DIMETHYL-PROLINIUM                                           
HETNAM     SAH S-ADENOSYL-L-HOMOCYSTEINE                                        
HETSYN     PBE PROLINE BETAINE                                                  
FORMUL   3  PBE    2(C7 H14 N O2 1+)                                            
FORMUL   5  SAH    2(C14 H20 N6 O5 S)                                           
FORMUL   7  HOH   *754(H2 O)                                                    
HELIX    1 AA1 MET A    1  VAL A    5  5                                   5    
HELIX    2 AA2 ASP A    8  GLN A   22  1                                  15    
HELIX    3 AA3 THR A   26  LEU A   31  1                                   6    
HELIX    4 AA4 TYR A   34  HIS A   36  5                                   3    
HELIX    5 AA5 ILE A   37  GLU A   55  1                                  19    
HELIX    6 AA6 GLY A   73  LEU A   79  1                                   7    
HELIX    7 AA7 THR A   93  LEU A  104  1                                  12    
HELIX    8 AA8 GLY A  105  LYS A  109  5                                   5    
HELIX    9 AA9 GLY A  118  PHE A  122  5                                   5    
HELIX   10 AB1 VAL A  137  LEU A  141  5                                   5    
HELIX   11 AB2 THR A  142  SER A  156  1                                  15    
HELIX   12 AB3 LEU A  187  ALA A  197  1                                  11    
HELIX   13 AB4 MET B    1  VAL B    5  5                                   5    
HELIX   14 AB5 ASP B    8  GLN B   22  1                                  15    
HELIX   15 AB6 THR B   26  LEU B   31  1                                   6    
HELIX   16 AB7 TYR B   34  HIS B   36  5                                   3    
HELIX   17 AB8 ILE B   37  ARG B   54  1                                  18    
HELIX   18 AB9 GLY B   73  LEU B   79  1                                   7    
HELIX   19 AC1 THR B   93  LEU B  104  1                                  12    
HELIX   20 AC2 GLY B  105  LYS B  109  5                                   5    
HELIX   21 AC3 GLY B  118  PHE B  122  5                                   5    
HELIX   22 AC4 VAL B  137  LEU B  141  5                                   5    
HELIX   23 AC5 THR B  142  GLY B  155  1                                  14    
HELIX   24 AC6 ASP B  186  ALA B  197  1                                  12    
SHEET    1 AA1 7 VAL A 111  CYS A 116  0                                        
SHEET    2 AA1 7 GLU A  86  ASP A  91  1  N  MET A  89   O  PHE A 115           
SHEET    3 AA1 7 CYS A  64  CYS A  68  1  N  ASP A  67   O  ASP A  88           
SHEET    4 AA1 7 TYR A 129  GLN A 135  1  O  TRP A 133   N  CYS A  68           
SHEET    5 AA1 7 LEU A 157  ALA A 170  1  O  VAL A 164   N  ILE A 134           
SHEET    6 AA1 7 SER A 182  ASP A 186  1  O  ARG A 185   N  ALA A 170           
SHEET    7 AA1 7 VAL A 174  ASP A 177 -1  N  ASP A 177   O  SER A 182           
SHEET    1 AA2 7 VAL A 111  CYS A 116  0                                        
SHEET    2 AA2 7 GLU A  86  ASP A  91  1  N  MET A  89   O  PHE A 115           
SHEET    3 AA2 7 CYS A  64  CYS A  68  1  N  ASP A  67   O  ASP A  88           
SHEET    4 AA2 7 TYR A 129  GLN A 135  1  O  TRP A 133   N  CYS A  68           
SHEET    5 AA2 7 LEU A 157  ALA A 170  1  O  VAL A 164   N  ILE A 134           
SHEET    6 AA2 7 HIS A 216  ARG A 223 -1  O  PHE A 220   N  ILE A 165           
SHEET    7 AA2 7 SER A 200  ARG A 206 -1  N  LEU A 202   O  ALA A 221           
SHEET    1 AA3 7 VAL B 111  CYS B 116  0                                        
SHEET    2 AA3 7 GLU B  86  ASP B  91  1  N  MET B  89   O  PHE B 115           
SHEET    3 AA3 7 CYS B  64  CYS B  68  1  N  ASP B  67   O  ASP B  88           
SHEET    4 AA3 7 TYR B 129  GLN B 135  1  O  TRP B 133   N  CYS B  68           
SHEET    5 AA3 7 LEU B 157  MET B 169  1  O  VAL B 164   N  ILE B 134           
SHEET    6 AA3 7 HIS B 216  ARG B 223 -1  O  LEU B 222   N  ILE B 163           
SHEET    7 AA3 7 SER B 200  ARG B 206 -1  N  LEU B 202   O  ALA B 221           
SHEET    1 AA4 2 VAL B 174  ASP B 177  0                                        
SHEET    2 AA4 2 SER B 182  ARG B 185 -1  O  SER B 182   N  ASP B 177           
LINK         C   PBE D   1                 N   PRO D   2     1555   1555  1.34  
LINK         C   PBE E   1                 N   PRO E   2     1555   1555  1.34  
SITE     1 AC1 22 TRP A  20  MET A  30  GLY A  69  GLY A  71                    
SITE     2 AC1 22 ARG A  74  ILE A  75  ASP A  91  ILE A  92                    
SITE     3 AC1 22 THR A  93  PHE A  96  CYS A 117  GLY A 118                    
SITE     4 AC1 22 LEU A 119  GLN A 120  GLN A 135  TRP A 136                    
SITE     5 AC1 22 VAL A 137  HIS A 140  HOH A 451  HOH A 533                    
SITE     6 AC1 22 HOH A 571  PBE D   1                                          
SITE     1 AC2 22 TRP B  20  MET B  30  GLY B  69  GLY B  71                    
SITE     2 AC2 22 ARG B  74  ILE B  75  ASP B  91  ILE B  92                    
SITE     3 AC2 22 THR B  93  PHE B  96  CYS B 117  GLY B 118                    
SITE     4 AC2 22 LEU B 119  GLN B 120  GLN B 135  TRP B 136                    
SITE     5 AC2 22 VAL B 137  HIS B 140  HOH B 433  HOH B 534                    
SITE     6 AC2 22 HOH B 581  PBE E   1                                          
CRYST1  114.836   66.302   68.730  90.00 106.44  90.00 C 1 2 1       8          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.008708  0.000000  0.002570        0.00000                         
SCALE2      0.000000  0.015083  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.015170        0.00000