PDB Short entry for 5D4B HEADER TRANSFERASE 07-AUG-15 5D4B TITLE STRUCTURAL BASIS FOR A NEW TEMPLATED ACTIVITY BY TERMINAL TITLE 2 DEOXYNUCLEOTIDYL TRANSFERASE: IMPLICATIONS FOR V(D)J RECOMBINATION COMPND MOL_ID: 1; COMPND 2 MOLECULE: TERMINAL DEOXYNUCLEOTIDYLTRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: DNA (5'-D(*AP*AP*AP*AP*AP*C)-3'); COMPND 7 CHAIN: C, D, E; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: DNA (5'-D(*TP*TP*TP*TP*TP*GP*G)-3'); COMPND 11 CHAIN: F; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: DNTT; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28A; SOURCE 10 MOL_ID: 2; SOURCE 11 SYNTHETIC: YES; SOURCE 12 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 13 ORGANISM_TAXID: 32630; SOURCE 14 MOL_ID: 3; SOURCE 15 SYNTHETIC: YES; SOURCE 16 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 17 ORGANISM_TAXID: 32630 KEYWDS TDT, SYNAPSIS, DOUBLE STRAND BREAKS, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR J.LOC'H,S.ROSARIO,M.DELARUE REVDAT 4 10-JAN-24 5D4B 1 LINK REVDAT 3 14-SEP-16 5D4B 1 JRNL REVDAT 2 17-AUG-16 5D4B 1 JRNL REVDAT 1 27-JUL-16 5D4B 0 JRNL AUTH J.LOC'H,S.ROSARIO,M.DELARUE JRNL TITL STRUCTURAL BASIS FOR A NEW TEMPLATED ACTIVITY BY TERMINAL JRNL TITL 2 DEOXYNUCLEOTIDYL TRANSFERASE: IMPLICATIONS FOR V(D)J JRNL TITL 3 RECOMBINATION. JRNL REF STRUCTURE V. 24 1452 2016 JRNL REFN ISSN 0969-2126 JRNL PMID 27499438 JRNL DOI 10.1016/J.STR.2016.06.014 REMARK 2 REMARK 2 RESOLUTION. 2.66 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.11.4 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.66 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.23 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.3 REMARK 3 NUMBER OF REFLECTIONS : 22902 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.209 REMARK 3 R VALUE (WORKING SET) : 0.207 REMARK 3 FREE R VALUE : 0.247 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1153 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 12 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.66 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.78 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.34 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2590 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2571 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2461 REMARK 3 BIN R VALUE (WORKING SET) : 0.2532 REMARK 3 BIN FREE R VALUE : 0.3337 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.98 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 129 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5188 REMARK 3 NUCLEIC ACID ATOMS : 484 REMARK 3 HETEROGEN ATOMS : 44 REMARK 3 SOLVENT ATOMS : 155 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 83.28 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 67.34 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 10.34250 REMARK 3 B22 (A**2) : -2.76880 REMARK 3 B33 (A**2) : -7.57370 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.373 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.336 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.937 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.910 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 5868 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 8049 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1849 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 92 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 828 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 5868 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : 0 ; 5.000 ; SEMIHARMONIC REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 787 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 6477 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.06 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.64 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 19.38 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): 32.0921 7.0541 -26.1692 REMARK 3 T TENSOR REMARK 3 T11: -0.0556 T22: -0.0748 REMARK 3 T33: 0.0188 T12: -0.0146 REMARK 3 T13: -0.0077 T23: -0.0016 REMARK 3 L TENSOR REMARK 3 L11: 0.2892 L22: 0.3284 REMARK 3 L33: 1.3780 L12: -0.0272 REMARK 3 L13: -0.1789 L23: 0.2930 REMARK 3 S TENSOR REMARK 3 S11: 0.0068 S12: 0.0209 S13: 0.0519 REMARK 3 S21: -0.0165 S22: -0.0090 S23: 0.0451 REMARK 3 S31: -0.0312 S32: 0.0373 S33: 0.0022 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|* } REMARK 3 ORIGIN FOR THE GROUP (A): 31.8273 -7.3247 25.3918 REMARK 3 T TENSOR REMARK 3 T11: -0.0773 T22: -0.0718 REMARK 3 T33: -0.0210 T12: 0.0322 REMARK 3 T13: 0.0090 T23: -0.0068 REMARK 3 L TENSOR REMARK 3 L11: 0.2914 L22: 0.5660 REMARK 3 L33: 1.7502 L12: 0.0465 REMARK 3 L13: 0.0183 L23: -0.5269 REMARK 3 S TENSOR REMARK 3 S11: 0.0369 S12: -0.0682 S13: -0.0428 REMARK 3 S21: -0.0602 S22: -0.2006 S23: -0.0339 REMARK 3 S31: -0.0027 S32: -0.0160 S33: 0.1637 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: { C|* } REMARK 3 ORIGIN FOR THE GROUP (A): 33.3667 -5.1571 -29.3393 REMARK 3 T TENSOR REMARK 3 T11: 0.0071 T22: -0.0055 REMARK 3 T33: 0.0045 T12: 0.0204 REMARK 3 T13: 0.0159 T23: -0.0025 REMARK 3 L TENSOR REMARK 3 L11: 0.0469 L22: 0.0041 REMARK 3 L33: 0.1316 L12: 0.0013 REMARK 3 L13: -0.1455 L23: -0.0976 REMARK 3 S TENSOR REMARK 3 S11: 0.0000 S12: -0.0010 S13: -0.0078 REMARK 3 S21: 0.0018 S22: 0.0011 S23: 0.0017 REMARK 3 S31: 0.0080 S32: -0.0029 S33: -0.0011 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: { D|* } REMARK 3 ORIGIN FOR THE GROUP (A): 35.2571 4.6757 28.3852 REMARK 3 T TENSOR REMARK 3 T11: 0.0029 T22: -0.0138 REMARK 3 T33: 0.0219 T12: -0.0125 REMARK 3 T13: 0.0045 T23: 0.0014 REMARK 3 L TENSOR REMARK 3 L11: 0.1190 L22: 0.0798 REMARK 3 L33: 0.0000 L12: -0.0425 REMARK 3 L13: -0.1972 L23: -0.0129 REMARK 3 S TENSOR REMARK 3 S11: -0.0008 S12: 0.0089 S13: 0.0049 REMARK 3 S21: -0.0014 S22: -0.0051 S23: -0.0022 REMARK 3 S31: -0.0080 S32: 0.0048 S33: 0.0059 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: { E|* } REMARK 3 ORIGIN FOR THE GROUP (A): 38.3817 -4.2953 -1.0657 REMARK 3 T TENSOR REMARK 3 T11: 0.0057 T22: 0.0031 REMARK 3 T33: 0.0019 T12: -0.0001 REMARK 3 T13: -0.0110 T23: 0.0033 REMARK 3 L TENSOR REMARK 3 L11: 0.1340 L22: 0.1512 REMARK 3 L33: 0.1241 L12: 0.0380 REMARK 3 L13: -0.0833 L23: 0.0825 REMARK 3 S TENSOR REMARK 3 S11: -0.0003 S12: 0.0029 S13: 0.0006 REMARK 3 S21: -0.0043 S22: 0.0013 S23: 0.0111 REMARK 3 S31: 0.0014 S32: -0.0022 S33: -0.0010 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: { F|* } REMARK 3 ORIGIN FOR THE GROUP (A): 37.3404 2.3043 3.6830 REMARK 3 T TENSOR REMARK 3 T11: 0.0216 T22: -0.0060 REMARK 3 T33: 0.0021 T12: 0.0048 REMARK 3 T13: 0.0417 T23: 0.0256 REMARK 3 L TENSOR REMARK 3 L11: 0.0000 L22: 0.3385 REMARK 3 L33: 0.0000 L12: -0.2938 REMARK 3 L13: -0.4796 L23: 0.0673 REMARK 3 S TENSOR REMARK 3 S11: 0.0005 S12: -0.0007 S13: -0.0001 REMARK 3 S21: -0.0016 S22: 0.0025 S23: 0.0084 REMARK 3 S31: -0.0020 S32: -0.0006 S33: -0.0029 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5D4B COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 07-AUG-15. REMARK 100 THE DEPOSITION ID IS D_1000212651. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-JUN-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.978570 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22902 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.660 REMARK 200 RESOLUTION RANGE LOW (A) : 49.230 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.9 REMARK 200 DATA REDUNDANCY : 5.000 REMARK 200 R MERGE (I) : 0.10100 REMARK 200 R SYM (I) : 0.11400 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 11.4700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.66 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.83 REMARK 200 COMPLETENESS FOR SHELL (%) : 90.5 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.79400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.670 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1JMS REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.38 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.03 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 22-28% PEG 4000, 100-300 MM LITHIUM REMARK 280 SULFATE AND 100 MM TRIS, PH 8.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.36500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 99.08500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.72500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 99.08500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.36500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 35.72500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 111 REMARK 465 GLY A 112 REMARK 465 SER A 113 REMARK 465 SER A 114 REMARK 465 HIS A 115 REMARK 465 HIS A 116 REMARK 465 HIS A 117 REMARK 465 HIS A 118 REMARK 465 HIS A 119 REMARK 465 HIS A 120 REMARK 465 SER A 121 REMARK 465 SER A 122 REMARK 465 GLY A 123 REMARK 465 LEU A 124 REMARK 465 VAL A 125 REMARK 465 PRO A 126 REMARK 465 ARG A 127 REMARK 465 GLY A 128 REMARK 465 SER A 129 REMARK 465 HIS A 130 REMARK 465 MET A 131 REMARK 465 SER A 132 REMARK 465 PRO A 133 REMARK 465 SER A 134 REMARK 465 PRO A 135 REMARK 465 VAL A 136 REMARK 465 PRO A 137 REMARK 465 GLY A 138 REMARK 465 SER A 139 REMARK 465 GLN A 140 REMARK 465 ASN A 141 REMARK 465 VAL A 142 REMARK 465 PRO A 143 REMARK 465 ALA A 144 REMARK 465 PRO A 145 REMARK 465 ALA A 146 REMARK 465 VAL A 147 REMARK 465 LYS A 148 REMARK 465 LYS A 387 REMARK 465 PHE A 388 REMARK 465 LYS A 394 REMARK 465 VAL A 395 REMARK 465 ASP A 396 REMARK 465 SER A 417 REMARK 465 GLU A 418 REMARK 465 LYS A 419 REMARK 465 SER A 420 REMARK 465 GLY A 421 REMARK 465 GLN A 422 REMARK 465 GLN A 423 REMARK 465 MET B 111 REMARK 465 GLY B 112 REMARK 465 SER B 113 REMARK 465 SER B 114 REMARK 465 HIS B 115 REMARK 465 HIS B 116 REMARK 465 HIS B 117 REMARK 465 HIS B 118 REMARK 465 HIS B 119 REMARK 465 HIS B 120 REMARK 465 SER B 121 REMARK 465 SER B 122 REMARK 465 GLY B 123 REMARK 465 LEU B 124 REMARK 465 VAL B 125 REMARK 465 PRO B 126 REMARK 465 ARG B 127 REMARK 465 GLY B 128 REMARK 465 SER B 129 REMARK 465 HIS B 130 REMARK 465 MET B 131 REMARK 465 SER B 132 REMARK 465 PRO B 133 REMARK 465 SER B 134 REMARK 465 PRO B 135 REMARK 465 VAL B 136 REMARK 465 PRO B 137 REMARK 465 GLY B 138 REMARK 465 SER B 139 REMARK 465 GLN B 140 REMARK 465 ASN B 141 REMARK 465 VAL B 142 REMARK 465 PRO B 143 REMARK 465 ALA B 144 REMARK 465 PRO B 145 REMARK 465 ALA B 146 REMARK 465 VAL B 147 REMARK 465 LYS B 148 REMARK 465 PRO B 391 REMARK 465 SER B 392 REMARK 465 ARG B 393 REMARK 465 LYS B 394 REMARK 465 VAL B 395 REMARK 465 ASP B 396 REMARK 465 SER B 417 REMARK 465 GLU B 418 REMARK 465 LYS B 419 REMARK 465 SER B 420 REMARK 465 GLY B 421 REMARK 465 GLN B 422 REMARK 465 GLN B 423 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 149 CG CD CE NZ REMARK 470 ARG A 158 CD NE CZ NH1 NH2 REMARK 470 GLN A 166 OE1 NE2 REMARK 470 LEU A 167 CG CD1 CD2 REMARK 470 GLU A 180 CD OE1 OE2 REMARK 470 ARG A 182 CZ NH1 NH2 REMARK 470 GLU A 183 CG CD OE1 OE2 REMARK 470 GLU A 185 CB CG CD OE1 OE2 REMARK 470 LYS A 199 CD CE NZ REMARK 470 SER A 200 OG REMARK 470 ILE A 205 CG1 CG2 CD1 REMARK 470 ASP A 219 OD1 OD2 REMARK 470 LYS A 222 CE NZ REMARK 470 SER A 223 OG REMARK 470 GLU A 226 CG CD OE1 OE2 REMARK 470 GLU A 230 CG CD OE1 OE2 REMARK 470 ASP A 231 OD1 OD2 REMARK 470 GLU A 233 CG CD OE1 OE2 REMARK 470 SER A 234 OG REMARK 470 LYS A 238 CG CD CE NZ REMARK 470 ASN A 242 CG OD1 ND2 REMARK 470 GLU A 244 CD OE1 OE2 REMARK 470 SER A 248 CB OG REMARK 470 LYS A 250 CD CE NZ REMARK 470 LYS A 261 CD CE NZ REMARK 470 GLU A 264 CD OE1 OE2 REMARK 470 LYS A 276 CD CE NZ REMARK 470 ARG A 284 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 297 CG CD OE1 OE2 REMARK 470 ARG A 305 CD NE CZ NH1 NH2 REMARK 470 MET A 313 CG SD CE REMARK 470 MET A 339 CG SD CE REMARK 470 GLU A 352 CG CD OE1 OE2 REMARK 470 THR A 354 OG1 CG2 REMARK 470 GLU A 355 CG CD OE1 OE2 REMARK 470 ASP A 356 CB CG OD1 OD2 REMARK 470 GLU A 357 CD OE1 OE2 REMARK 470 GLU A 358 CG CD OE1 OE2 REMARK 470 GLN A 359 CG CD OE1 NE2 REMARK 470 GLN A 360 CG CD OE1 NE2 REMARK 470 LYS A 364 CD CE NZ REMARK 470 ASP A 367 CG OD1 OD2 REMARK 470 LYS A 370 CD CE NZ REMARK 470 LEU A 381 CD1 CD2 REMARK 470 PHE A 385 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU A 386 CG CD OE1 OE2 REMARK 470 LYS A 389 CB CG CD CE NZ REMARK 470 GLN A 390 CG CD OE1 NE2 REMARK 470 SER A 392 CB OG REMARK 470 ARG A 393 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 399 CG OD1 OD2 REMARK 470 LYS A 409 CE NZ REMARK 470 ARG A 414 CG CD NE CZ NH1 NH2 REMARK 470 HIS A 416 CG ND1 CD2 CE1 NE2 REMARK 470 GLU A 424 CG CD OE1 OE2 REMARK 470 ASP A 441 CB CG OD1 OD2 REMARK 470 ARG A 442 CZ NH1 NH2 REMARK 470 ARG A 454 CD NE CZ NH1 NH2 REMARK 470 ARG A 461 CZ NH1 NH2 REMARK 470 LYS A 482 CD CE NZ REMARK 470 VAL A 484 CG1 CG2 REMARK 470 GLU A 489 CB CG CD OE1 OE2 REMARK 470 LYS B 149 CG CD CE NZ REMARK 470 ARG B 158 CD NE CZ NH1 NH2 REMARK 470 LEU B 167 CG CD1 CD2 REMARK 470 GLU B 180 CG CD OE1 OE2 REMARK 470 LEU B 181 CG CD1 CD2 REMARK 470 ARG B 182 NE CZ NH1 NH2 REMARK 470 GLU B 183 CG CD OE1 OE2 REMARK 470 ASN B 184 CG OD1 ND2 REMARK 470 GLU B 185 CG CD OE1 OE2 REMARK 470 LYS B 199 CE NZ REMARK 470 ILE B 205 CG1 CG2 CD1 REMARK 470 LYS B 209 CG CD CE NZ REMARK 470 GLU B 212 CG CD OE1 OE2 REMARK 470 ASP B 219 CG OD1 OD2 REMARK 470 LYS B 220 NZ REMARK 470 LYS B 222 CE NZ REMARK 470 SER B 223 OG REMARK 470 GLU B 226 CG CD OE1 OE2 REMARK 470 ILE B 228 CD1 REMARK 470 GLU B 230 CG CD OE1 OE2 REMARK 470 ASP B 231 CG OD1 OD2 REMARK 470 GLU B 233 CG CD OE1 OE2 REMARK 470 SER B 234 CB OG REMARK 470 SER B 235 OG REMARK 470 GLU B 236 CG CD OE1 OE2 REMARK 470 LYS B 238 CG CD CE NZ REMARK 470 ASN B 242 CG OD1 ND2 REMARK 470 GLU B 244 CG CD OE1 OE2 REMARK 470 ARG B 245 CD NE CZ NH1 NH2 REMARK 470 LYS B 247 CD CE NZ REMARK 470 PHE B 249 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS B 250 CE NZ REMARK 470 LYS B 261 NZ REMARK 470 GLU B 264 CG CD OE1 OE2 REMARK 470 LYS B 265 CG CD CE NZ REMARK 470 ARG B 268 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 272 CG CD NE CZ NH1 NH2 REMARK 470 SER B 275 OG REMARK 470 LYS B 276 CG CD CE NZ REMARK 470 GLN B 278 CG CD OE1 NE2 REMARK 470 ASP B 280 CG OD1 OD2 REMARK 470 LYS B 281 CG CD CE NZ REMARK 470 SER B 282 OG REMARK 470 LEU B 283 CG CD1 CD2 REMARK 470 ARG B 284 CD NE CZ NH1 NH2 REMARK 470 GLN B 287 CD OE1 NE2 REMARK 470 LYS B 290 CG CD CE NZ REMARK 470 GLU B 297 CD OE1 OE2 REMARK 470 VAL B 300 CG1 CG2 REMARK 470 VAL B 303 CG1 CG2 REMARK 470 LEU B 314 CD1 CD2 REMARK 470 GLU B 317 CD OE1 OE2 REMARK 470 LEU B 327 CG CD1 CD2 REMARK 470 GLU B 355 CG CD OE1 OE2 REMARK 470 ASP B 356 CG OD1 OD2 REMARK 470 GLU B 357 CG CD OE1 OE2 REMARK 470 GLU B 358 CG CD OE1 OE2 REMARK 470 GLN B 359 CG CD OE1 NE2 REMARK 470 GLN B 360 CD OE1 NE2 REMARK 470 LYS B 364 CD CE NZ REMARK 470 LYS B 370 CD CE NZ REMARK 470 GLN B 371 CG CD OE1 NE2 REMARK 470 GLU B 386 CG CD OE1 OE2 REMARK 470 PHE B 388 CB CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS B 389 CG CD CE NZ REMARK 470 GLN B 390 CG CD OE1 NE2 REMARK 470 ILE B 407 CD1 REMARK 470 LYS B 409 CD CE NZ REMARK 470 HIS B 416 CG ND1 CD2 CE1 NE2 REMARK 470 GLU B 424 CG CD OE1 OE2 REMARK 470 ASP B 441 CG OD1 OD2 REMARK 470 ARG B 442 NE CZ NH1 NH2 REMARK 470 ARG B 443 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 469 CD CE NZ REMARK 470 LYS B 482 CG CD CE NZ REMARK 470 ARG B 483 CZ NH1 NH2 REMARK 470 GLU B 487 CD OE1 OE2 REMARK 470 GLU B 489 CG CD OE1 OE2 REMARK 470 GLU B 504 CD OE1 OE2 REMARK 470 DC C 6 O3' REMARK 470 DC D 6 O3' REMARK 470 DC E 6 O3' C2 O2 N3 C4 N4 C5 REMARK 470 DC E 6 C6 REMARK 470 DG F 7 C8 N7 C5 C6 O6 N1 C2 REMARK 470 DG F 7 N2 N3 C4 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DT F 5 O4' - C1' - N1 ANGL. DEV. = 2.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 183 119.10 47.18 REMARK 500 ASN A 184 12.57 -172.14 REMARK 500 GLU A 185 -57.15 11.91 REMARK 500 CYS A 216 -12.30 84.62 REMARK 500 GLU A 230 -72.70 -66.43 REMARK 500 CYS A 302 151.12 -44.23 REMARK 500 THR A 331 -153.05 -104.84 REMARK 500 LEU A 398 168.98 72.70 REMARK 500 ASN A 509 38.24 -87.67 REMARK 500 ASN B 184 73.39 -107.88 REMARK 500 GLU B 230 -73.06 -66.02 REMARK 500 CYS B 302 151.30 -44.81 REMARK 500 THR B 331 -153.50 -104.82 REMARK 500 PHE B 385 56.73 -64.34 REMARK 500 GLU B 386 77.21 -107.80 REMARK 500 ASN B 509 39.06 -88.67 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 GLU A 183 10.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 763 DISTANCE = 6.88 ANGSTROMS REMARK 525 HOH A 764 DISTANCE = 9.43 ANGSTROMS REMARK 525 HOH B 765 DISTANCE = 7.71 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 602 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 253 O REMARK 620 2 VAL A 255 O 86.6 REMARK 620 3 VAL A 258 O 97.7 87.9 REMARK 620 4 DA C 4 OP1 178.1 91.5 82.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 601 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 343 OD1 REMARK 620 2 ASP A 345 OD2 97.0 REMARK 620 3 DC C 6 OP1 87.1 78.0 REMARK 620 4 SO4 C 401 O2 169.7 93.2 94.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 602 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR B 253 O REMARK 620 2 VAL B 258 O 87.9 REMARK 620 3 DA D 4 OP1 146.4 82.9 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 601 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 343 OD1 REMARK 620 2 ASP B 345 OD2 96.8 REMARK 620 3 SO4 B 603 O4 176.8 83.3 REMARK 620 4 HOH B 702 O 74.5 168.8 105.8 REMARK 620 5 DC D 6 OP1 88.9 83.9 94.3 88.8 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA B 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 605 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 606 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 C 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 C 402 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4D46 RELATED DB: PDB REMARK 900 RELATED ID: 4D49 RELATED DB: PDB DBREF 5D4B A 132 510 UNP Q3UZ80 Q3UZ80_MOUSE 132 510 DBREF 5D4B B 132 510 UNP Q3UZ80 Q3UZ80_MOUSE 132 510 DBREF 5D4B C 1 6 PDB 5D4B 5D4B 1 6 DBREF 5D4B D 1 6 PDB 5D4B 5D4B 1 6 DBREF 5D4B E 1 6 PDB 5D4B 5D4B 1 6 DBREF 5D4B F 1 7 PDB 5D4B 5D4B 1 7 SEQADV 5D4B MET A 111 UNP Q3UZ80 INITIATING METHIONINE SEQADV 5D4B GLY A 112 UNP Q3UZ80 EXPRESSION TAG SEQADV 5D4B SER A 113 UNP Q3UZ80 EXPRESSION TAG SEQADV 5D4B SER A 114 UNP Q3UZ80 EXPRESSION TAG SEQADV 5D4B HIS A 115 UNP Q3UZ80 EXPRESSION TAG SEQADV 5D4B HIS A 116 UNP Q3UZ80 EXPRESSION TAG SEQADV 5D4B HIS A 117 UNP Q3UZ80 EXPRESSION TAG SEQADV 5D4B HIS A 118 UNP Q3UZ80 EXPRESSION TAG SEQADV 5D4B HIS A 119 UNP Q3UZ80 EXPRESSION TAG SEQADV 5D4B HIS A 120 UNP Q3UZ80 EXPRESSION TAG SEQADV 5D4B SER A 121 UNP Q3UZ80 EXPRESSION TAG SEQADV 5D4B SER A 122 UNP Q3UZ80 EXPRESSION TAG SEQADV 5D4B GLY A 123 UNP Q3UZ80 EXPRESSION TAG SEQADV 5D4B LEU A 124 UNP Q3UZ80 EXPRESSION TAG SEQADV 5D4B VAL A 125 UNP Q3UZ80 EXPRESSION TAG SEQADV 5D4B PRO A 126 UNP Q3UZ80 EXPRESSION TAG SEQADV 5D4B ARG A 127 UNP Q3UZ80 EXPRESSION TAG SEQADV 5D4B GLY A 128 UNP Q3UZ80 EXPRESSION TAG SEQADV 5D4B SER A 129 UNP Q3UZ80 EXPRESSION TAG SEQADV 5D4B HIS A 130 UNP Q3UZ80 EXPRESSION TAG SEQADV 5D4B MET A 131 UNP Q3UZ80 EXPRESSION TAG SEQADV 5D4B MET B 111 UNP Q3UZ80 INITIATING METHIONINE SEQADV 5D4B GLY B 112 UNP Q3UZ80 EXPRESSION TAG SEQADV 5D4B SER B 113 UNP Q3UZ80 EXPRESSION TAG SEQADV 5D4B SER B 114 UNP Q3UZ80 EXPRESSION TAG SEQADV 5D4B HIS B 115 UNP Q3UZ80 EXPRESSION TAG SEQADV 5D4B HIS B 116 UNP Q3UZ80 EXPRESSION TAG SEQADV 5D4B HIS B 117 UNP Q3UZ80 EXPRESSION TAG SEQADV 5D4B HIS B 118 UNP Q3UZ80 EXPRESSION TAG SEQADV 5D4B HIS B 119 UNP Q3UZ80 EXPRESSION TAG SEQADV 5D4B HIS B 120 UNP Q3UZ80 EXPRESSION TAG SEQADV 5D4B SER B 121 UNP Q3UZ80 EXPRESSION TAG SEQADV 5D4B SER B 122 UNP Q3UZ80 EXPRESSION TAG SEQADV 5D4B GLY B 123 UNP Q3UZ80 EXPRESSION TAG SEQADV 5D4B LEU B 124 UNP Q3UZ80 EXPRESSION TAG SEQADV 5D4B VAL B 125 UNP Q3UZ80 EXPRESSION TAG SEQADV 5D4B PRO B 126 UNP Q3UZ80 EXPRESSION TAG SEQADV 5D4B ARG B 127 UNP Q3UZ80 EXPRESSION TAG SEQADV 5D4B GLY B 128 UNP Q3UZ80 EXPRESSION TAG SEQADV 5D4B SER B 129 UNP Q3UZ80 EXPRESSION TAG SEQADV 5D4B HIS B 130 UNP Q3UZ80 EXPRESSION TAG SEQADV 5D4B MET B 131 UNP Q3UZ80 EXPRESSION TAG SEQRES 1 A 400 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 400 LEU VAL PRO ARG GLY SER HIS MET SER PRO SER PRO VAL SEQRES 3 A 400 PRO GLY SER GLN ASN VAL PRO ALA PRO ALA VAL LYS LYS SEQRES 4 A 400 ILE SER GLN TYR ALA CYS GLN ARG ARG THR THR LEU ASN SEQRES 5 A 400 ASN TYR ASN GLN LEU PHE THR ASP ALA LEU ASP ILE LEU SEQRES 6 A 400 ALA GLU ASN ASP GLU LEU ARG GLU ASN GLU GLY SER CYS SEQRES 7 A 400 LEU ALA PHE MET ARG ALA SER SER VAL LEU LYS SER LEU SEQRES 8 A 400 PRO PHE PRO ILE THR SER MET LYS ASP THR GLU GLY ILE SEQRES 9 A 400 PRO CYS LEU GLY ASP LYS VAL LYS SER ILE ILE GLU GLY SEQRES 10 A 400 ILE ILE GLU ASP GLY GLU SER SER GLU ALA LYS ALA VAL SEQRES 11 A 400 LEU ASN ASP GLU ARG TYR LYS SER PHE LYS LEU PHE THR SEQRES 12 A 400 SER VAL PHE GLY VAL GLY LEU LYS THR ALA GLU LYS TRP SEQRES 13 A 400 PHE ARG MET GLY PHE ARG THR LEU SER LYS ILE GLN SER SEQRES 14 A 400 ASP LYS SER LEU ARG PHE THR GLN MET GLN LYS ALA GLY SEQRES 15 A 400 PHE LEU TYR TYR GLU ASP LEU VAL SER CYS VAL ASN ARG SEQRES 16 A 400 PRO GLU ALA GLU ALA VAL SER MET LEU VAL LYS GLU ALA SEQRES 17 A 400 VAL VAL THR PHE LEU PRO ASP ALA LEU VAL THR MET THR SEQRES 18 A 400 GLY GLY PHE ARG ARG GLY LYS MET THR GLY HIS ASP VAL SEQRES 19 A 400 ASP PHE LEU ILE THR SER PRO GLU ALA THR GLU ASP GLU SEQRES 20 A 400 GLU GLN GLN LEU LEU HIS LYS VAL THR ASP PHE TRP LYS SEQRES 21 A 400 GLN GLN GLY LEU LEU LEU TYR CYS ASP ILE LEU GLU SER SEQRES 22 A 400 THR PHE GLU LYS PHE LYS GLN PRO SER ARG LYS VAL ASP SEQRES 23 A 400 ALA LEU ASP HIS PHE GLN LYS CYS PHE LEU ILE LEU LYS SEQRES 24 A 400 LEU ASP HIS GLY ARG VAL HIS SER GLU LYS SER GLY GLN SEQRES 25 A 400 GLN GLU GLY LYS GLY TRP LYS ALA ILE ARG VAL ASP LEU SEQRES 26 A 400 VAL MET CYS PRO TYR ASP ARG ARG ALA PHE ALA LEU LEU SEQRES 27 A 400 GLY TRP THR GLY SER ARG GLN PHE GLU ARG ASP LEU ARG SEQRES 28 A 400 ARG TYR ALA THR HIS GLU ARG LYS MET MET LEU ASP ASN SEQRES 29 A 400 HIS ALA LEU TYR ASP ARG THR LYS ARG VAL PHE LEU GLU SEQRES 30 A 400 ALA GLU SER GLU GLU GLU ILE PHE ALA HIS LEU GLY LEU SEQRES 31 A 400 ASP TYR ILE GLU PRO TRP GLU ARG ASN ALA SEQRES 1 B 400 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 400 LEU VAL PRO ARG GLY SER HIS MET SER PRO SER PRO VAL SEQRES 3 B 400 PRO GLY SER GLN ASN VAL PRO ALA PRO ALA VAL LYS LYS SEQRES 4 B 400 ILE SER GLN TYR ALA CYS GLN ARG ARG THR THR LEU ASN SEQRES 5 B 400 ASN TYR ASN GLN LEU PHE THR ASP ALA LEU ASP ILE LEU SEQRES 6 B 400 ALA GLU ASN ASP GLU LEU ARG GLU ASN GLU GLY SER CYS SEQRES 7 B 400 LEU ALA PHE MET ARG ALA SER SER VAL LEU LYS SER LEU SEQRES 8 B 400 PRO PHE PRO ILE THR SER MET LYS ASP THR GLU GLY ILE SEQRES 9 B 400 PRO CYS LEU GLY ASP LYS VAL LYS SER ILE ILE GLU GLY SEQRES 10 B 400 ILE ILE GLU ASP GLY GLU SER SER GLU ALA LYS ALA VAL SEQRES 11 B 400 LEU ASN ASP GLU ARG TYR LYS SER PHE LYS LEU PHE THR SEQRES 12 B 400 SER VAL PHE GLY VAL GLY LEU LYS THR ALA GLU LYS TRP SEQRES 13 B 400 PHE ARG MET GLY PHE ARG THR LEU SER LYS ILE GLN SER SEQRES 14 B 400 ASP LYS SER LEU ARG PHE THR GLN MET GLN LYS ALA GLY SEQRES 15 B 400 PHE LEU TYR TYR GLU ASP LEU VAL SER CYS VAL ASN ARG SEQRES 16 B 400 PRO GLU ALA GLU ALA VAL SER MET LEU VAL LYS GLU ALA SEQRES 17 B 400 VAL VAL THR PHE LEU PRO ASP ALA LEU VAL THR MET THR SEQRES 18 B 400 GLY GLY PHE ARG ARG GLY LYS MET THR GLY HIS ASP VAL SEQRES 19 B 400 ASP PHE LEU ILE THR SER PRO GLU ALA THR GLU ASP GLU SEQRES 20 B 400 GLU GLN GLN LEU LEU HIS LYS VAL THR ASP PHE TRP LYS SEQRES 21 B 400 GLN GLN GLY LEU LEU LEU TYR CYS ASP ILE LEU GLU SER SEQRES 22 B 400 THR PHE GLU LYS PHE LYS GLN PRO SER ARG LYS VAL ASP SEQRES 23 B 400 ALA LEU ASP HIS PHE GLN LYS CYS PHE LEU ILE LEU LYS SEQRES 24 B 400 LEU ASP HIS GLY ARG VAL HIS SER GLU LYS SER GLY GLN SEQRES 25 B 400 GLN GLU GLY LYS GLY TRP LYS ALA ILE ARG VAL ASP LEU SEQRES 26 B 400 VAL MET CYS PRO TYR ASP ARG ARG ALA PHE ALA LEU LEU SEQRES 27 B 400 GLY TRP THR GLY SER ARG GLN PHE GLU ARG ASP LEU ARG SEQRES 28 B 400 ARG TYR ALA THR HIS GLU ARG LYS MET MET LEU ASP ASN SEQRES 29 B 400 HIS ALA LEU TYR ASP ARG THR LYS ARG VAL PHE LEU GLU SEQRES 30 B 400 ALA GLU SER GLU GLU GLU ILE PHE ALA HIS LEU GLY LEU SEQRES 31 B 400 ASP TYR ILE GLU PRO TRP GLU ARG ASN ALA SEQRES 1 C 6 DA DA DA DA DA DC SEQRES 1 D 6 DA DA DA DA DA DC SEQRES 1 E 6 DA DA DA DA DA DC SEQRES 1 F 7 DT DT DT DT DT DG DG HET MG A 601 1 HET NA A 602 1 HET SO4 A 603 5 HET SO4 A 604 5 HET MG B 601 1 HET NA B 602 1 HET SO4 B 603 5 HET SO4 B 604 5 HET SO4 B 605 5 HET SO4 B 606 5 HET SO4 C 401 5 HET SO4 C 402 5 HETNAM MG MAGNESIUM ION HETNAM NA SODIUM ION HETNAM SO4 SULFATE ION FORMUL 7 MG 2(MG 2+) FORMUL 8 NA 2(NA 1+) FORMUL 9 SO4 8(O4 S 2-) FORMUL 19 HOH *155(H2 O) HELIX 1 AA1 TYR A 153 ARG A 157 5 5 HELIX 2 AA2 ASN A 165 ARG A 182 1 18 HELIX 3 AA3 GLU A 185 LEU A 201 1 17 HELIX 4 AA4 SER A 207 GLU A 212 5 6 HELIX 5 AA5 GLY A 218 GLY A 232 1 15 HELIX 6 AA6 SER A 234 ASP A 243 1 10 HELIX 7 AA7 ASP A 243 SER A 254 1 12 HELIX 8 AA8 GLY A 259 MET A 269 1 11 HELIX 9 AA9 THR A 273 ASP A 280 1 8 HELIX 10 AB1 THR A 286 TYR A 295 1 10 HELIX 11 AB2 TYR A 295 SER A 301 1 7 HELIX 12 AB3 ARG A 305 LEU A 323 1 19 HELIX 13 AB4 THR A 331 ARG A 336 1 6 HELIX 14 AB5 THR A 354 GLN A 372 1 19 HELIX 15 AB6 GLY A 413 VAL A 415 5 3 HELIX 16 AB7 PRO A 439 ASP A 441 5 3 HELIX 17 AB8 ARG A 442 GLY A 452 1 11 HELIX 18 AB9 SER A 453 LYS A 469 1 17 HELIX 19 AC1 SER A 490 GLY A 499 1 10 HELIX 20 AC2 GLU A 504 ARG A 508 5 5 HELIX 21 AC3 TYR B 153 ARG B 157 5 5 HELIX 22 AC4 ASN B 165 ARG B 182 1 18 HELIX 23 AC5 ASN B 184 LEU B 201 1 18 HELIX 24 AC6 GLY B 218 GLY B 232 1 15 HELIX 25 AC7 SER B 234 ASP B 243 1 10 HELIX 26 AC8 ASP B 243 SER B 254 1 12 HELIX 27 AC9 GLY B 259 MET B 269 1 11 HELIX 28 AD1 THR B 273 ASP B 280 1 8 HELIX 29 AD2 THR B 286 TYR B 295 1 10 HELIX 30 AD3 TYR B 295 SER B 301 1 7 HELIX 31 AD4 ARG B 305 LEU B 323 1 19 HELIX 32 AD5 GLY B 332 ARG B 336 1 5 HELIX 33 AD6 THR B 354 GLN B 372 1 19 HELIX 34 AD7 GLY B 413 VAL B 415 5 3 HELIX 35 AD8 PRO B 439 ASP B 441 5 3 HELIX 36 AD9 ARG B 442 GLY B 452 1 11 HELIX 37 AE1 SER B 453 GLU B 467 1 15 HELIX 38 AE2 SER B 490 GLY B 499 1 10 HELIX 39 AE3 GLU B 504 ARG B 508 5 5 SHEET 1 AA1 2 VAL A 303 ASN A 304 0 SHEET 2 AA1 2 THR A 340 GLY A 341 -1 O GLY A 341 N VAL A 303 SHEET 1 AA2 5 LEU A 327 MET A 330 0 SHEET 2 AA2 5 ASP A 343 THR A 349 -1 O THR A 349 N LEU A 327 SHEET 3 AA2 5 TRP A 428 MET A 437 1 O VAL A 436 N ILE A 348 SHEET 4 AA2 5 GLN A 402 ASP A 411 -1 N LEU A 408 O ILE A 431 SHEET 5 AA2 5 LEU A 375 LEU A 381 -1 N LEU A 381 O LYS A 403 SHEET 1 AA3 3 MET A 470 LEU A 472 0 SHEET 2 AA3 3 LEU A 477 ASP A 479 -1 O TYR A 478 N MET A 471 SHEET 3 AA3 3 VAL A 484 LEU A 486 -1 O VAL A 484 N ASP A 479 SHEET 1 AA4 2 VAL B 303 ASN B 304 0 SHEET 2 AA4 2 THR B 340 GLY B 341 -1 O GLY B 341 N VAL B 303 SHEET 1 AA5 5 LEU B 327 THR B 331 0 SHEET 2 AA5 5 ASP B 343 THR B 349 -1 O THR B 349 N LEU B 327 SHEET 3 AA5 5 TRP B 428 MET B 437 1 O VAL B 436 N ILE B 348 SHEET 4 AA5 5 GLN B 402 ASP B 411 -1 N LEU B 410 O LYS B 429 SHEET 5 AA5 5 LEU B 375 LEU B 381 -1 N LEU B 376 O ILE B 407 SHEET 1 AA6 3 MET B 470 LEU B 472 0 SHEET 2 AA6 3 LEU B 477 ASP B 479 -1 O TYR B 478 N MET B 471 SHEET 3 AA6 3 VAL B 484 LEU B 486 -1 O VAL B 484 N ASP B 479 LINK O THR A 253 NA NA A 602 1555 1555 2.26 LINK O VAL A 255 NA NA A 602 1555 1555 2.57 LINK O VAL A 258 NA NA A 602 1555 1555 2.44 LINK OD1 ASP A 343 MG MG A 601 1555 1555 1.99 LINK OD2 ASP A 345 MG MG A 601 1555 1555 2.55 LINK MG MG A 601 OP1 DC C 6 1555 1555 2.37 LINK MG MG A 601 O2 SO4 C 401 1555 1555 2.27 LINK NA NA A 602 OP1 DA C 4 1555 1555 2.66 LINK O THR B 253 NA NA B 602 1555 1555 2.43 LINK O VAL B 258 NA NA B 602 1555 1555 2.62 LINK OD1 ASP B 343 MG MG B 601 1555 1555 1.96 LINK OD2 ASP B 345 MG MG B 601 1555 1555 2.60 LINK MG MG B 601 O4 SO4 B 603 1555 1555 2.03 LINK MG MG B 601 O HOH B 702 1555 1555 2.31 LINK MG MG B 601 OP1 DC D 6 1555 1555 2.11 LINK NA NA B 602 OP1 DA D 4 1555 1555 2.59 CISPEP 1 GLY A 452 SER A 453 0 1.81 CISPEP 2 LYS B 426 GLY B 427 0 -2.75 CISPEP 3 GLY B 452 SER B 453 0 0.20 SITE 1 AC1 4 ASP A 343 ASP A 345 DC C 6 SO4 C 401 SITE 1 AC2 4 THR A 253 VAL A 255 VAL A 258 DA C 4 SITE 1 AC3 3 LYS A 338 MET A 339 THR A 340 SITE 1 AC4 6 LYS A 469 ARG A 480 SER B 207 LYS B 209 SITE 2 AC4 6 GLU B 467 ARG B 468 SITE 1 AC5 5 ASP B 343 ASP B 345 SO4 B 603 HOH B 702 SITE 2 AC5 5 DC D 6 SITE 1 AC6 4 THR B 253 VAL B 255 VAL B 258 DA D 4 SITE 1 AC7 8 GLY B 332 GLY B 333 ARG B 336 ASP B 345 SITE 2 AC7 8 MG B 601 HOH B 702 HOH B 707 DC D 6 SITE 1 AC8 3 LYS B 338 MET B 339 THR B 340 SITE 1 AC9 2 LYS A 426 LYS B 426 SITE 1 AD1 5 ASN B 184 GLU B 185 GLY B 186 SER B 187 SITE 2 AD1 5 DA E 1 SITE 1 AD2 8 GLY A 332 GLY A 333 ARG A 336 LYS A 338 SITE 2 AD2 8 ASP A 345 MG A 601 DC C 6 HOH C 503 SITE 1 AD3 4 DA C 5 DC C 6 HOH C 501 HOH C 502 CRYST1 56.730 71.450 198.170 90.00 90.00 90.00 P 21 21 21 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017627 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013996 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005046 0.00000