PDB Short entry for 5D4P
HEADER    SIGNALING PROTEIN                       08-AUG-15   5D4P              
TITLE     STRUCTURE OF CPII BOUND TO ADP AND BICARBONATE, FROM THIOMONAS        
TITLE    2 INTERMEDIA K12                                                       
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: PUTATIVE NITROGEN REGULATORY PROTEIN P-II GLNB;            
COMPND   3 CHAIN: A, B, C;                                                      
COMPND   4 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: THIOMONAS ARSENITOXYDANS (STRAIN DSM 22701 /    
SOURCE   3 CIP 110005 / 3AS);                                                   
SOURCE   4 ORGANISM_TAXID: 426114;                                              
SOURCE   5 STRAIN: DSM 22701 / CIP 110005 / 3AS;                                
SOURCE   6 GENE: THI_0133;                                                      
SOURCE   7 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   8 EXPRESSION_SYSTEM_TAXID: 469008;                                     
SOURCE   9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3);                                 
SOURCE  10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;                              
SOURCE  11 EXPRESSION_SYSTEM_PLASMID: PET28                                     
KEYWDS    CARBON REGULATORY PII PROTEIN, CPII, NITROGEN REGULATORY PII PROTEIN, 
KEYWDS   2 NUCLEOTIDE BINDING, ADP HYDROLYSIS, BICARBONATE BINDING, ACETATE     
KEYWDS   3 BINDING, SIGNALING PROTEIN                                           
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    N.M.WHEATLEY,J.NGO,D.CASCIO,M.R.SAWAYA,T.O.YEATES                     
REVDAT   3   27-SEP-23 5D4P    1       REMARK                                   
REVDAT   2   23-OCT-19 5D4P    1       JRNL   REMARK                            
REVDAT   1   28-SEP-16 5D4P    0                                                
JRNL        AUTH   N.M.WHEATLEY,K.D.EDEN,J.NGO,J.S.ROSINSKI,M.R.SAWAYA,         
JRNL        AUTH 2 D.CASCIO,M.COLLAZO,H.HOVEIDA,W.L.HUBBELL,T.O.YEATES          
JRNL        TITL   A PII-LIKE PROTEIN REGULATED BY BICARBONATE: STRUCTURAL AND  
JRNL        TITL 2 BIOCHEMICAL STUDIES OF THE CARBOXYSOME-ASSOCIATED CPII       
JRNL        TITL 3 PROTEIN.                                                     
JRNL        REF    J.MOL.BIOL.                   V. 428  4013 2016              
JRNL        REFN                   ESSN 1089-8638                               
JRNL        PMID   27464895                                                     
JRNL        DOI    10.1016/J.JMB.2016.07.015                                    
REMARK   2                                                                      
REMARK   2 RESOLUTION.    2.20 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : PHENIX                                               
REMARK   3   AUTHORS     : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN            
REMARK   3               : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE,           
REMARK   3               : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER,            
REMARK   3               : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY,              
REMARK   3               : REETAL PAI,RANDY READ,JANE RICHARDSON,               
REMARK   3               : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI,           
REMARK   3               : NICHOLAS SAUTER,JACOB SMITH,LAURENT                  
REMARK   3               : STORONI,TOM TERWILLIGER,PETER ZWART                  
REMARK   3                                                                      
REMARK   3    REFINEMENT TARGET : ML                                            
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 43.34                          
REMARK   3   MIN(FOBS/SIGMA_FOBS)              : 1.340                          
REMARK   3   COMPLETENESS FOR RANGE        (%) : 97.6                           
REMARK   3   NUMBER OF REFLECTIONS             : 17194                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   R VALUE     (WORKING + TEST SET) : 0.197                           
REMARK   3   R VALUE            (WORKING SET) : 0.191                           
REMARK   3   FREE R VALUE                     : 0.247                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 9.990                           
REMARK   3   FREE R VALUE TEST SET COUNT      : 1718                            
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT (IN BINS).                           
REMARK   3   BIN  RESOLUTION RANGE  COMPL.    NWORK NFREE   RWORK  RFREE        
REMARK   3     1 43.3466 -  5.0307    0.94     1343   150  0.1696 0.2095        
REMARK   3     2  5.0307 -  3.9939    0.97     1314   146  0.1265 0.1815        
REMARK   3     3  3.9939 -  3.4893    0.97     1291   143  0.1653 0.2102        
REMARK   3     4  3.4893 -  3.1704    0.99     1318   145  0.2004 0.2400        
REMARK   3     5  3.1704 -  2.9432    1.00     1296   144  0.2138 0.2614        
REMARK   3     6  2.9432 -  2.7697    0.99     1300   145  0.2132 0.3061        
REMARK   3     7  2.7697 -  2.6310    0.99     1290   142  0.2195 0.2792        
REMARK   3     8  2.6310 -  2.5165    0.99     1297   144  0.2115 0.3474        
REMARK   3     9  2.5165 -  2.4196    0.99     1306   146  0.2033 0.2617        
REMARK   3    10  2.4196 -  2.3361    1.00     1286   143  0.2208 0.2832        
REMARK   3    11  2.3361 -  2.2631    0.98     1261   140  0.3127 0.4030        
REMARK   3    12  2.2631 -  2.2000    0.91     1174   130  0.4201 0.4712        
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELLING.                                             
REMARK   3   METHOD USED        : FLAT BULK SOLVENT MODEL                       
REMARK   3   SOLVENT RADIUS     : 1.11                                          
REMARK   3   SHRINKAGE RADIUS   : 0.90                                          
REMARK   3   K_SOL              : NULL                                          
REMARK   3   B_SOL              : NULL                                          
REMARK   3                                                                      
REMARK   3  ERROR ESTIMATES.                                                    
REMARK   3   COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED)     : 0.310            
REMARK   3   PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.700           
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : 34.24                          
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : 43.90                          
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : NULL                                                 
REMARK   3    B22 (A**2) : NULL                                                 
REMARK   3    B33 (A**2) : NULL                                                 
REMARK   3    B12 (A**2) : NULL                                                 
REMARK   3    B13 (A**2) : NULL                                                 
REMARK   3    B23 (A**2) : NULL                                                 
REMARK   3                                                                      
REMARK   3  TWINNING INFORMATION.                                               
REMARK   3   FRACTION: NULL                                                     
REMARK   3   OPERATOR: NULL                                                     
REMARK   3                                                                      
REMARK   3  DEVIATIONS FROM IDEAL VALUES.                                       
REMARK   3                 RMSD          COUNT                                  
REMARK   3   BOND      :  0.008           2501                                  
REMARK   3   ANGLE     :  1.280           3391                                  
REMARK   3   CHIRALITY :  0.052            376                                  
REMARK   3   PLANARITY :  0.006            420                                  
REMARK   3   DIHEDRAL  : 17.696            880                                  
REMARK   3                                                                      
REMARK   3  TLS DETAILS                                                         
REMARK   3   NUMBER OF TLS GROUPS  : 1                                          
REMARK   3   TLS GROUP : 1                                                      
REMARK   3    SELECTION: ( CHAIN A AND ( RESID 3:107 OR RESID 201:201 OR        
REMARK   3               RESID 301:314 OR RESID 202:202 ) ) OR ( CHAIN C AND    
REMARK   3               ( RESID 2:107 OR RESID 201:201 OR RESID 301:322 OR     
REMARK   3               RESID 202:204 ) ) OR ( CHAIN B AND ( RESID 4:107 OR    
REMARK   3               RESID 201:201 OR RESID 301:309 OR RESID 202:204 ) )    
REMARK   3    ORIGIN FOR THE GROUP (A):  -3.9521   1.1362  -7.4624              
REMARK   3    T TENSOR                                                          
REMARK   3      T11:   0.2092 T22:   0.3516                                     
REMARK   3      T33:   0.1663 T12:   0.0019                                     
REMARK   3      T13:   0.0085 T23:  -0.0203                                     
REMARK   3    L TENSOR                                                          
REMARK   3      L11:   1.6893 L22:   2.3328                                     
REMARK   3      L33:   3.3954 L12:   0.3224                                     
REMARK   3      L13:   0.5403 L23:  -0.0630                                     
REMARK   3    S TENSOR                                                          
REMARK   3      S11:   0.0075 S12:   0.0807 S13:  -0.0646                       
REMARK   3      S21:  -0.1252 S22:   0.0481 S23:  -0.0452                       
REMARK   3      S31:   0.0130 S32:   0.1061 S33:  -0.0620                       
REMARK   3                                                                      
REMARK   3  NCS DETAILS                                                         
REMARK   3   NUMBER OF NCS GROUPS : 1                                           
REMARK   3   NCS GROUP : 1                                                      
REMARK   3    NCS OPERATOR : 1                                                  
REMARK   3     REFERENCE SELECTION: CHAIN A                                     
REMARK   3     SELECTION          : CHAIN B                                     
REMARK   3     ATOM PAIRS NUMBER  : 1388                                        
REMARK   3     RMSD               : NULL                                        
REMARK   3    NCS OPERATOR : 2                                                  
REMARK   3     REFERENCE SELECTION: CHAIN A                                     
REMARK   3     SELECTION          : CHAIN C                                     
REMARK   3     ATOM PAIRS NUMBER  : 1388                                        
REMARK   3     RMSD               : NULL                                        
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 5D4P COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-AUG-15.                  
REMARK 100 THE DEPOSITION ID IS D_1000212677.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 07-MAR-15                          
REMARK 200  TEMPERATURE           (KELVIN) : 100                                
REMARK 200  PH                             : 8.0                                
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : APS                                
REMARK 200  BEAMLINE                       : 24-ID-C                            
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 0.97920                            
REMARK 200  MONOCHROMATOR                  : NULL                               
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : PIXEL                              
REMARK 200  DETECTOR MANUFACTURER          : DECTRIS PILATUS 6M                 
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : XDS                                
REMARK 200  DATA SCALING SOFTWARE          : XSCALE                             
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 17217                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 2.200                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 57.570                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : -3.000                             
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 97.8                               
REMARK 200  DATA REDUNDANCY                : 5.740                              
REMARK 200  R MERGE                    (I) : 0.07700                            
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 14.9800                            
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 2.26                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 91.9                               
REMARK 200  DATA REDUNDANCY IN SHELL       : NULL                               
REMARK 200  R MERGE FOR SHELL          (I) : 0.59700                            
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : 2.960                              
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT        
REMARK 200 SOFTWARE USED: PHASER 2.5.6                                          
REMARK 200 STARTING MODEL: 5D4L                                                 
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 47.11                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.33                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: 1.0 M CITRATE, 0.1 M IMIDAZOLE PH 8.0,   
REMARK 280  EVAPORATION, TEMPERATURE 298K                                       
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21                       
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -X+1/2,-Y,Z+1/2                                         
REMARK 290       3555   -X,Y+1/2,-Z+1/2                                         
REMARK 290       4555   X+1/2,-Y+1/2,-Z                                         
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000       24.90500            
REMARK 290   SMTRY2   2  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000  1.000000       43.96000            
REMARK 290   SMTRY1   3 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   3  0.000000  1.000000  0.000000       38.08000            
REMARK 290   SMTRY3   3  0.000000  0.000000 -1.000000       43.96000            
REMARK 290   SMTRY1   4  1.000000  0.000000  0.000000       24.90500            
REMARK 290   SMTRY2   4  0.000000 -1.000000  0.000000       38.08000            
REMARK 290   SMTRY3   4  0.000000  0.000000 -1.000000        0.00000            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC                          
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC                   
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 TOTAL BURIED SURFACE AREA: 9460 ANGSTROM**2                          
REMARK 350 SURFACE AREA OF THE COMPLEX: 13130 ANGSTROM**2                       
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -31.0 KCAL/MOL                        
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C                               
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     MET A     1                                                      
REMARK 465     ASN A     2                                                      
REMARK 465     PHE A    57                                                      
REMARK 465     ASN A    58                                                      
REMARK 465     GLU A    59                                                      
REMARK 465     ASN A   108                                                      
REMARK 465     MET B     1                                                      
REMARK 465     ASN B     2                                                      
REMARK 465     ALA B     3                                                      
REMARK 465     ASN B   108                                                      
REMARK 465     MET C     1                                                      
REMARK 465     ASN C   108                                                      
REMARK 470                                                                      
REMARK 470 MISSING ATOM                                                         
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;           
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;          
REMARK 470 I=INSERTION CODE):                                                   
REMARK 470   M RES CSSEQI  ATOMS                                                
REMARK 470     ILE A   4    CG1  CG2  CD1                                       
REMARK 470     GLU A  22    CG   CD   OE1  OE2                                  
REMARK 470     ARG A  30    CG   CD   NE   CZ   NH1  NH2                        
REMARK 470     LYS A  34    CG   CD   CE   NZ                                   
REMARK 470     HIS A  48    CG   ND1  CD2  CE1  NE2                             
REMARK 470     GLU A  52    CG   CD   OE1  OE2                                  
REMARK 470     HIS A  54    CG   ND1  CD2  CE1  NE2                             
REMARK 470     LEU A  55    CG   CD1  CD2                                       
REMARK 470     ASP A  60    CG   OD1  OD2                                       
REMARK 470     ILE B   4    CG1  CG2  CD1                                       
REMARK 470     LYS B   5    CG   CD   CE   NZ                                   
REMARK 470     LYS B  34    CE   NZ                                             
REMARK 470     SER B  47    OG                                                  
REMARK 470     HIS B  48    CG   ND1  CD2  CE1  NE2                             
REMARK 470     ASN B  58    CG   OD1  ND2                                       
REMARK 470     GLU B  59    CG   CD   OE1  OE2                                  
REMARK 470     ASP B  60    CG   OD1  OD2                                       
REMARK 470     ILE C   4    CG1  CG2  CD1                                       
REMARK 470     LYS C   5    CG   CD   CE   NZ                                   
REMARK 470     GLU C  22    CG   CD   OE1  OE2                                  
REMARK 470     LYS C  34    CD   CE   NZ                                        
REMARK 470     LEU C  55    CG   CD1  CD2                                       
REMARK 470     MET C  56    CG   SD   CE                                        
REMARK 470     ASP C  60    CG   OD1  OD2                                       
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    PHE B  57      -33.84   -131.75                                   
REMARK 500    ASP C  61       46.30    -86.71                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue ADP A 201                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC2                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue BCT A 202                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC3                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue ADP B 201                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC4                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue BCT B 202                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC5                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue BCT B 203                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC6                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue BCT B 204                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC7                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue ADP C 201                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC8                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue BCT C 202                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC9                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue BCT C 203                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AD1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue BCT C 204                 
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 5D4L   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 5D4M   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 5D4N   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 5D4O   RELATED DB: PDB                                   
DBREF  5D4P A    1   108  UNP    D5X329   D5X329_THIK1     1    108             
DBREF  5D4P B    1   108  UNP    D5X329   D5X329_THIK1     1    108             
DBREF  5D4P C    1   108  UNP    D5X329   D5X329_THIK1     1    108             
SEQRES   1 A  108  MET ASN ALA ILE LYS LEU TYR PRO LEU LYS LYS LEU GLU          
SEQRES   2 A  108  ILE ILE LEU GLU GLY ALA HIS LYS GLU PHE ALA THR ASP          
SEQRES   3 A  108  LEU LEU ASP ARG ALA GLY VAL LYS GLY TYR THR ILE VAL          
SEQRES   4 A  108  GLY ASN LEU SER GLY LYS GLY SER HIS GLY MET TYR GLU          
SEQRES   5 A  108  GLY HIS LEU MET PHE ASN GLU ASP ASP ALA LEU ILE MET          
SEQRES   6 A  108  ILE ILE ALA ALA VAL PRO GLU GLU LEU VAL GLY PRO LEU          
SEQRES   7 A  108  LEU GLU GLY PHE GLN PRO PHE PHE GLU ALA HIS SER GLY          
SEQRES   8 A  108  VAL VAL PHE VAL HIS ASP ILE GLN VAL GLY ARG PRO ILE          
SEQRES   9 A  108  LYS PHE ARG ASN                                              
SEQRES   1 B  108  MET ASN ALA ILE LYS LEU TYR PRO LEU LYS LYS LEU GLU          
SEQRES   2 B  108  ILE ILE LEU GLU GLY ALA HIS LYS GLU PHE ALA THR ASP          
SEQRES   3 B  108  LEU LEU ASP ARG ALA GLY VAL LYS GLY TYR THR ILE VAL          
SEQRES   4 B  108  GLY ASN LEU SER GLY LYS GLY SER HIS GLY MET TYR GLU          
SEQRES   5 B  108  GLY HIS LEU MET PHE ASN GLU ASP ASP ALA LEU ILE MET          
SEQRES   6 B  108  ILE ILE ALA ALA VAL PRO GLU GLU LEU VAL GLY PRO LEU          
SEQRES   7 B  108  LEU GLU GLY PHE GLN PRO PHE PHE GLU ALA HIS SER GLY          
SEQRES   8 B  108  VAL VAL PHE VAL HIS ASP ILE GLN VAL GLY ARG PRO ILE          
SEQRES   9 B  108  LYS PHE ARG ASN                                              
SEQRES   1 C  108  MET ASN ALA ILE LYS LEU TYR PRO LEU LYS LYS LEU GLU          
SEQRES   2 C  108  ILE ILE LEU GLU GLY ALA HIS LYS GLU PHE ALA THR ASP          
SEQRES   3 C  108  LEU LEU ASP ARG ALA GLY VAL LYS GLY TYR THR ILE VAL          
SEQRES   4 C  108  GLY ASN LEU SER GLY LYS GLY SER HIS GLY MET TYR GLU          
SEQRES   5 C  108  GLY HIS LEU MET PHE ASN GLU ASP ASP ALA LEU ILE MET          
SEQRES   6 C  108  ILE ILE ALA ALA VAL PRO GLU GLU LEU VAL GLY PRO LEU          
SEQRES   7 C  108  LEU GLU GLY PHE GLN PRO PHE PHE GLU ALA HIS SER GLY          
SEQRES   8 C  108  VAL VAL PHE VAL HIS ASP ILE GLN VAL GLY ARG PRO ILE          
SEQRES   9 C  108  LYS PHE ARG ASN                                              
HET    ADP  A 201      27                                                       
HET    BCT  A 202       5                                                       
HET    ADP  B 201      31                                                       
HET    BCT  B 202       5                                                       
HET    BCT  B 203       5                                                       
HET    BCT  B 204       5                                                       
HET    ADP  C 201      31                                                       
HET    BCT  C 202       5                                                       
HET    BCT  C 203       5                                                       
HET    BCT  C 204       5                                                       
HETNAM     ADP ADENOSINE-5'-DIPHOSPHATE                                         
HETNAM     BCT BICARBONATE ION                                                  
FORMUL   4  ADP    3(C10 H15 N5 O10 P2)                                         
FORMUL   5  BCT    7(C H O3 1-)                                                 
FORMUL  14  HOH   *45(H2 O)                                                     
HELIX    1 AA1 HIS A   20  GLY A   32  1                                  13    
HELIX    2 AA2 PRO A   71  GLU A   73  5                                   3    
HELIX    3 AA3 LEU A   74  HIS A   89  1                                  16    
HELIX    4 AA4 ARG A  102  PHE A  106  5                                   5    
HELIX    5 AA5 HIS B   20  ALA B   31  1                                  12    
HELIX    6 AA6 GLU B   52  MET B   56  5                                   5    
HELIX    7 AA7 PRO B   71  HIS B   89  1                                  19    
HELIX    8 AA8 ARG B  102  ARG B  107  5                                   6    
HELIX    9 AA9 HIS C   20  GLY C   32  1                                  13    
HELIX   10 AB1 PRO C   71  HIS C   89  1                                  19    
HELIX   11 AB2 ARG C  102  ARG C  107  5                                   6    
SHEET    1 AA112 MET A  50  TYR A  51  0                                        
SHEET    2 AA112 LEU A  42  LYS A  45 -1  N  GLY A  44   O  TYR A  51           
SHEET    3 AA112 TYR C  36  LYS C  45 -1  O  ILE C  38   N  SER A  43           
SHEET    4 AA112 LEU C  63  VAL C  70 -1  O  ILE C  67   N  THR C  37           
SHEET    5 AA112 TYR C   7  GLU C  17 -1  N  LEU C  12   O  ALA C  68           
SHEET    6 AA112 VAL C  92  VAL C 100 -1  O  VAL C 100   N  TYR C   7           
SHEET    7 AA112 VAL A  92  VAL A 100 -1  N  VAL A  95   O  GLN C  99           
SHEET    8 AA112 VAL B  92  VAL B 100 -1  O  VAL B  95   N  GLN A  99           
SHEET    9 AA112 TYR B   7  GLU B  17 -1  N  ILE B  15   O  VAL B  92           
SHEET   10 AA112 LEU B  63  VAL B  70 -1  O  ALA B  68   N  LEU B  12           
SHEET   11 AA112 TYR B  36  LYS B  45 -1  N  THR B  37   O  ILE B  67           
SHEET   12 AA112 MET B  50  TYR B  51 -1  O  TYR B  51   N  GLY B  44           
SHEET    1 AA212 MET A  50  TYR A  51  0                                        
SHEET    2 AA212 LEU A  42  LYS A  45 -1  N  GLY A  44   O  TYR A  51           
SHEET    3 AA212 TYR C  36  LYS C  45 -1  O  ILE C  38   N  SER A  43           
SHEET    4 AA212 LEU C  63  VAL C  70 -1  O  ILE C  67   N  THR C  37           
SHEET    5 AA212 TYR A   7  GLU A  17  0                                        
SHEET    6 AA212 TYR A  36  VAL A  39  0                                        
SHEET    7 AA212 VAL C  92  VAL C 100  0                                        
SHEET    8 AA212 VAL B  92  VAL B 100 -1  N  GLN B  99   O  VAL C  95           
SHEET    9 AA212 TYR B   7  GLU B  17 -1  N  ILE B  15   O  VAL B  92           
SHEET   10 AA212 LEU B  63  VAL B  70 -1  O  ALA B  68   N  LEU B  12           
SHEET   11 AA212 TYR B  36  LYS B  45 -1  N  THR B  37   O  ILE B  67           
SHEET   12 AA212 MET B  50  TYR B  51 -1  O  TYR B  51   N  GLY B  44           
SHEET    1 AA310 MET A  50  TYR A  51  0                                        
SHEET    2 AA310 LEU A  42  LYS A  45 -1  N  GLY A  44   O  TYR A  51           
SHEET    3 AA310 TYR C  36  LYS C  45 -1  O  ILE C  38   N  SER A  43           
SHEET    4 AA310 LEU C  63  VAL C  70 -1  O  ILE C  67   N  THR C  37           
SHEET    5 AA310 VAL A  92  VAL A 100  0                                        
SHEET    6 AA310 TYR A   7  GLU A  17 -1  N  TYR A   7   O  VAL A 100           
SHEET    7 AA310 LEU A  63  VAL A  70 -1  O  ILE A  64   N  LEU A  16           
SHEET    8 AA310 TYR A  36  VAL A  39 -1  N  VAL A  39   O  MET A  65           
SHEET    9 AA310 TYR B  36  LYS B  45 -1  O  SER B  43   N  ILE A  38           
SHEET   10 AA310 MET B  50  TYR B  51 -1  O  TYR B  51   N  GLY B  44           
SHEET    1 AA4 4 MET A  50  TYR A  51  0                                        
SHEET    2 AA4 4 LEU A  42  LYS A  45 -1  N  GLY A  44   O  TYR A  51           
SHEET    3 AA4 4 TYR C  36  LYS C  45 -1  O  ILE C  38   N  SER A  43           
SHEET    4 AA4 4 MET C  50  TYR C  51 -1  O  TYR C  51   N  GLY C  44           
SHEET    1 AA5 5 MET A  50  TYR A  51  0                                        
SHEET    2 AA5 5 LEU A  42  LYS A  45 -1  N  GLY A  44   O  TYR A  51           
SHEET    3 AA5 5 TYR C  36  LYS C  45 -1  O  ILE C  38   N  SER A  43           
SHEET    4 AA5 5 TYR B  36  LYS B  45 -1  N  ILE B  38   O  SER C  43           
SHEET    5 AA5 5 MET B  50  TYR B  51 -1  O  TYR B  51   N  GLY B  44           
SITE     1 AC1 18 GLY A  44  LYS A  45  GLY A  46  SER A  47                    
SITE     2 AC1 18 HIS A  48  GLY A  49  TYR A  51  LEU A  63                    
SITE     3 AC1 18 SER A  90  GLY A  91  HOH A 312  GLY C  35                    
SITE     4 AC1 18 TYR C  36  THR C  37  ILE C  67  ALA C  69                    
SITE     5 AC1 18 LYS C 105  PHE C 106                                          
SITE     1 AC2  5 VAL A 100  GLY A 101  ARG A 102  VAL B  92                    
SITE     2 AC2  5 VAL B  93                                                     
SITE     1 AC3 21 GLY A  35  TYR A  36  THR A  37  ILE A  67                    
SITE     2 AC3 21 ALA A  69  LYS A 105  PHE A 106  GLY B  44                    
SITE     3 AC3 21 LYS B  45  GLY B  46  SER B  47  HIS B  48                    
SITE     4 AC3 21 GLY B  49  TYR B  51  LEU B  63  SER B  90                    
SITE     5 AC3 21 GLY B  91  VAL B  92  PHE B  94  HOH B 302                    
SITE     6 AC3 21 HOH B 305                                                     
SITE     1 AC4  5 VAL B 100  GLY B 101  ARG B 102  VAL C  92                    
SITE     2 AC4  5 VAL C  93                                                     
SITE     1 AC5  1 ARG A 102                                                     
SITE     1 AC6  1 ARG B 102                                                     
SITE     1 AC7 20 ARG A 107  GLY B  35  TYR B  36  THR B  37                    
SITE     2 AC7 20 ILE B  67  ALA B  69  LYS B 105  PHE B 106                    
SITE     3 AC7 20 GLY C  44  LYS C  45  GLY C  46  SER C  47                    
SITE     4 AC7 20 HIS C  48  GLY C  49  TYR C  51  LEU C  63                    
SITE     5 AC7 20 SER C  90  GLY C  91  HOH C 305  HOH C 306                    
SITE     1 AC8  6 VAL A  92  VAL A  93  VAL C 100  GLY C 101                    
SITE     2 AC8  6 ARG C 102  BCT C 203                                          
SITE     1 AC9  1 BCT C 202                                                     
SITE     1 AD1  1 HIS C  89                                                     
CRYST1   49.810   76.160   87.920  90.00  90.00  90.00 P 21 21 21   12          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.020076  0.000000  0.000000        0.00000                         
SCALE2      0.000000  0.013130  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.011374        0.00000